Prupe.1G557900_v2.0.a1

phosphatase 2c

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
45544608 .. 45552908
8301 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G557900.1

Sequence Viewer

Length: 1683 bp
ATGGCTGATCCTTTTCTATGCCTCGTCAGAAGTCGGTGTTTGAGCTTCTCTGCCTTCTCTCCAGCTCCCTTTCCATCTCCAAATCCCTTCCTCCATGAAAAACTTGGTAGAATTCACACTCCAATTGCAGGATTTCCTAAGCCCAGGCCGACGCTTGTTCCGCATTCATCCTCGCAATTACATCTGATTTCCACAAGCGAGTGGTTTGATGGAAGCGTCGTCTTCTGCTTTGGGGACGAGAGCGAGAAAGCTGTTGCTGTTCCCACTGAAACGGAAATTGGCAAAGAGGATTGTGAGTGTCAGGTTGTTACTGAAACTAATAATACTAGTAGTCTTCATGTGCAAAATTCAGAATTGAGCGAAGAATTTTTGGGGAGCAATGTGCATGAATCCGAAATTAAACCCGAAATTCGTGCTTTTCCGGCAAGTTCCGGTGCCGTCAAGGAGAACGCTGTCGTTCATACAGATCCTAATGCGGTTTCAGCCACCAGTACCAACAACAATGTGACTGGTGGAGAGGAAACAGGGCATGCCGCCGCAACCACCGCAGCAGATGAAACTGAAGAAGGCTCAAAAGTGTTAGCTGAGAATGCCCCTTCCACAAATTCAGAAGACAAATTCACAGAGGGAAAAGCACATAGAAGAGATGTTTCAGGAGTATCAACTACTAGGGTAGTGGAATTGCACACATTTGAGGGCACTCCTGATGGGGAGGACAGATCTGCAGCGGTTCTTCAACTATCTTCTAGTGCTGCTGTATTACCTCATCTCCCAAAGTTAGCTGAGAATCCACCTTCCAGAAATGCAGAAGATGAATTCACAAAGGGTAAATCACAAAGAGGAGATGTTTCAGGAGTATCAACTCCTAGGAAAGTGGAAGTACATACAGTTCAAGGAACTTCTGATGGGGAGGACATATCTGCAGCGGTTCTTCAACTATTTTCTAGCGCTGCCTTATTACCGCATCCCTCAAAGGCATTGACAGGTGGGGAGGATGCTTACTTTGTTGCTTGCCAAAACTGGCTAGGTGTGGCTGATGGAGTTGGTCAGTGGTCACTAGAAGGGGTTAATCCTGGACTATATGCTCAGGAACTCATGGAGACTTGTGAAAGGTTCGTATCTGATTGCAAAGGTATACCATTGACCGAACCGGAAGAAGTCCTTATTAGAGCTGCTGCAAAAACAAAAGCACCTGGACTATCTACTGTTTTGGTCGCTTATTTTGATGGTCAGGCTCTCCATGTGGCCAACATTGGCAACTCGGGATTTATTGTAATTAGAAATGGTGCTGTCTTTAAAAGATCATCACCAATGGTTCACGAGTTCAATTTTCCAATACAGATTGAAAGAGGTGATGATCCCTCAAAACTTATAGAGAGATACCGAATAGATTTGGATGATGGAGATGTGATTGTCACTGCAACAGATGGCCTCTTTGACAACTTGTATGAGCAAGAGATCATCTCAATTGTATCGAAGTCTATGCAAACCACATTGAAACTTGAGGATATAACAAAGTTCTTGGCAACTAGTGCACAAGAAGTGGGGCAATCTACATCTGGAAGGAGCCCATTTGCAGATGCAGCCGAGGCATCTGGGTATGTGGGATATAGTGGAGGCAAGCTTGATGATGTGACCGTTATCCTGTCATATGTACAAAAGAAATCCAGTGCCTTACAGTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

561

Amino Acids

59.86

Weight (kDa)

4.81

Isoelectric Point (pI)

42.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 434
AccI GTMKAC 1 cut(s) 1135
AciI CCGC 8 cut(s) 161, 476, 534, 537, 546, 728, 926, 962
AclWI GGATC 3 cut(s) 2, 461, 1352
AcoI YGGCCR 1 cut(s) 1245
AcsI RAATTY 7 cut(s) 111, 346, 365, 408, 604, 617, 815
AcuI CTGAAG 1 cut(s) 582
AfaI GTAC 3 cut(s) 493, 882, 1656
AfeI AGCGCT 1 cut(s) 949
AfiI CCNNNNNNNGG 1 cut(s) 128
AgsI TTSAA 6 cut(s) 737, 893, 935, 1327, 1346, 1498
AhlI ACTAGT 2 cut(s) 326, 1529
AjnI CCWGG 3 cut(s) 143, 1072, 1192
AjuI GAANNNNNNNTTGG 2 cut(s) 261, 293
AluBI AGCT 7 cut(s) 45, 65, 251, 584, 782, 1172, 1624
AluI AGCT 7 cut(s) 45, 65, 251, 584, 782, 1172, 1624
Alw21I GWGCWC 1 cut(s) 1537
Alw26I GTCTC 1 cut(s) 1094
Alw44I GTGCAC 1 cut(s) 1533
AlwI GGATC 3 cut(s) 2, 461, 1352
Ama87I CYCGRG 1 cut(s) 1261
Aor51HI AGCGCT 1 cut(s) 949
AoxI GGCC 3 cut(s) 146, 1245, 1429
ApaLI GTGCAC 1 cut(s) 1533
ApeKI GCWGC 8 cut(s) 548, 725, 752, 923, 950, 1172, 1175, 1583
ApoI RAATTY 7 cut(s) 111, 346, 365, 408, 604, 617, 815
AspA2I CCTAGG 1 cut(s) 866
AspLEI GCGC 1 cut(s) 950
AsuHPI GGTGA 2 cut(s) 1299, 1364
AvaI CYCGRG 1 cut(s) 1261
AvrII CCTAGG 1 cut(s) 866
BaeGI GKGCMC 2 cut(s) 701, 1537
BalI TGGCCA 1 cut(s) 1247
BanI GGYRCC 1 cut(s) 434
BanII GRGCYC 1 cut(s) 1571
BauI CACGAG 1 cut(s) 1319
BbsI GAAGAC 3 cut(s) 214, 326, 618
Bbv12I GWGCWC 1 cut(s) 1537
BbvI GCAGC 8 cut(s) 560, 737, 739, 935, 937, 1159, 1162, 1595
BccI CCATC 8 cut(s) 82, 203, 701, 899, 1031, 1220, 1394, 1421
BceAI ACGGC 1 cut(s) 422
BcgI CGANNNNNNTGC 4 cut(s) 395, 429, 1465, 1499
BciT130I CCWGG 3 cut(s) 145, 1074, 1194
BcoDI GTCTC 1 cut(s) 1094
BcuI ACTAGT 2 cut(s) 326, 1529
BfaI CTAG 8 cut(s) 327, 669, 747, 867, 945, 1025, 1058, 1530
BfmI CTRYAG 2 cut(s) 723, 921
BfoI RGCGCY 1 cut(s) 951
BglII AGATCT 1 cut(s) 719
BlnI CCTAGG 1 cut(s) 866
Bme1390I CCNGG 3 cut(s) 145, 1074, 1194
BmeT110I CYCGRG 1 cut(s) 1261
BmiI GGNNCC 2 cut(s) 436, 1568
BmrFI CCNGG 3 cut(s) 145, 1074, 1194
BmsI GCATC 4 cut(s) 973, 985, 1570, 1601
BpiI GAAGAC 3 cut(s) 214, 326, 618
BplI GAGNNNNNCTC 2 cut(s) 1448, 1480
BpmI CTGGAG 1 cut(s) 45
Bpu10I CCTNAGC 2 cut(s) 138, 1086
BpuEI CTTGAG 1 cut(s) 1523
BsaJI CCNNGG 3 cut(s) 143, 866, 1587
BsaWI WCCGGW 2 cut(s) 431, 1150
BsaXI ACNNNNNCTCC 2 cut(s) 753, 783
Bsc4I CCNNNNNNNGG 1 cut(s) 128
Bse1I ACTGG 4 cut(s) 489, 514, 1025, 1668
Bse3DI GCAATG 1 cut(s) 385
BseBI CCWGG 3 cut(s) 145, 1074, 1194
BseDI CCNNGG 3 cut(s) 143, 866, 1587
BseGI GGATG 4 cut(s) 167, 964, 1000, 1402
BseLI CCNNNNNNNGG 1 cut(s) 128
BseMI GCAATG 1 cut(s) 385
BseMII CTCAG 3 cut(s) 576, 774, 1100
BseNI ACTGG 4 cut(s) 489, 514, 1025, 1668
BseRI GAGGAG 1 cut(s) 855
BseSI GKGCMC 2 cut(s) 701, 1537
BseXI GCAGC 8 cut(s) 560, 737, 739, 935, 937, 1159, 1162, 1595
BshFI GGCC 3 cut(s) 148, 1247, 1431
BshNI GGYRCC 1 cut(s) 434
BsiHKAI GWGCWC 1 cut(s) 1537
BsiHKCI CYCGRG 1 cut(s) 1261
BsiSI CCGG 3 cut(s) 422, 432, 1151
BslFI GGGAC 1 cut(s) 248
BslI CCNNNNNNNGG 1 cut(s) 128
BsmAI GTCTC 1 cut(s) 1094
BsmFI GGGAC 1 cut(s) 248
BsmI GAATGC 2 cut(s) 163, 595
BsnI GGCC 3 cut(s) 148, 1247, 1431
BsoBI CYCGRG 1 cut(s) 1261
Bsp1286I GDGCHC 3 cut(s) 701, 1537, 1571
Bsp1407I TGTACA 1 cut(s) 1654
Bsp143I GATC 6 cut(s) 7, 466, 719, 1301, 1357, 1458
BspACI CCGC 8 cut(s) 161, 476, 534, 537, 546, 728, 926, 962
BspANI GGCC 3 cut(s) 148, 1247, 1431
BspCNI CTCAG 3 cut(s) 577, 775, 1099
BspLI GGNNCC 2 cut(s) 436, 1568
BspMAI CTGCAG 2 cut(s) 727, 925
BspPI GGATC 3 cut(s) 2, 461, 1352
BspT107I GGYRCC 1 cut(s) 434
BsrDI GCAATG 1 cut(s) 385
BsrGI TGTACA 1 cut(s) 1654
BsrI ACTGG 4 cut(s) 489, 514, 1025, 1668
BssECI CCNNGG 3 cut(s) 143, 866, 1587
BssMI GATC 6 cut(s) 7, 466, 719, 1301, 1357, 1458
BssNAI GTATAC 1 cut(s) 1136
BssSI CACGAG 1 cut(s) 1319
BssT1I CCWWGG 1 cut(s) 866
Bst1107I GTATAC 1 cut(s) 1136
Bst2BI CACGAG 1 cut(s) 1319
Bst2UI CCWGG 3 cut(s) 145, 1074, 1194
Bst4CI ACNGT 4 cut(s) 889, 1207, 1639, 1680
Bst6I CTCTTC 1 cut(s) 637
BstAPI GCANNNNNTGC 1 cut(s) 1532
BstAUI TGTACA 1 cut(s) 1654
BstC8I GCNNGC 3 cut(s) 531, 1012, 1622
BstDEI CTNAG 4 cut(s) 138, 585, 783, 1086
BstF5I GGATG 4 cut(s) 167, 964, 1000, 1402
BstH2I RGCGCY 1 cut(s) 951
BstHHI GCGC 1 cut(s) 950
BstKTI GATC 6 cut(s) 10, 469, 722, 1304, 1360, 1461
BstMAI GTCTC 1 cut(s) 1094
BstMBI GATC 6 cut(s) 7, 466, 719, 1301, 1357, 1458
BstMWI GCNNNNNNNGC 8 cut(s) 160, 422, 482, 545, 590, 1532, 1583, 1589
BstNI CCWGG 3 cut(s) 145, 1074, 1194
BstNSI RCATGY 1 cut(s) 533
BstSCI CCNGG 3 cut(s) 143, 1072, 1192
BstSFI CTRYAG 2 cut(s) 723, 921
BstSLI GKGCMC 2 cut(s) 701, 1537
BstV1I GCAGC 8 cut(s) 560, 737, 739, 935, 937, 1159, 1162, 1595
BstV2I GAAGAC 3 cut(s) 214, 326, 618
BstX2I RGATCY 2 cut(s) 466, 719
BstYI RGATCY 2 cut(s) 466, 719
BstZ17I GTATAC 1 cut(s) 1136
BsuRI GGCC 3 cut(s) 148, 1247, 1431
BtsCI GGATG 4 cut(s) 167, 964, 1000, 1402
BtsI GCAGTG 1 cut(s) 1416
BtsIMutI CAGTG 4 cut(s) 264, 1055, 1416, 1675
Cac8I GCNNGC 3 cut(s) 531, 1012, 1622
CfoI GCGC 1 cut(s) 950
CseI GACGC 2 cut(s) 160, 205
Csp6I GTAC 3 cut(s) 492, 881, 1655
CviAII CATG 6 cut(s) 95, 338, 386, 530, 1096, 1241
CviQI GTAC 3 cut(s) 492, 881, 1655
DdeI CTNAG 4 cut(s) 138, 585, 783, 1086
DpnI GATC 6 cut(s) 9, 468, 721, 1303, 1359, 1460
DpnII GATC 6 cut(s) 7, 466, 719, 1301, 1357, 1458
DraI TTTAAA 1 cut(s) 1297
EaeI YGGCCR 1 cut(s) 1245
Eam1104I CTCTTC 1 cut(s) 637
EarI CTCTTC 1 cut(s) 637
Eco130I CCWWGG 1 cut(s) 866
Eco24I GRGCYC 1 cut(s) 1571
Eco47III AGCGCT 1 cut(s) 949
Eco57I CTGAAG 1 cut(s) 582
Eco88I CYCGRG 1 cut(s) 1261
EcoRI GAATTC 2 cut(s) 111, 815
EcoRII CCWGG 3 cut(s) 143, 1072, 1192
EcoT14I CCWWGG 1 cut(s) 866
EcoT38I GRGCYC 1 cut(s) 1571
ErhI CCWWGG 1 cut(s) 866
FaeI CATG 6 cut(s) 98, 341, 389, 533, 1099, 1244
FalI AAGNNNNNCTT 2 cut(s) 1146, 1178
FaqI GGGAC 1 cut(s) 248
FatI CATG 6 cut(s) 94, 337, 385, 529, 1095, 1240
FauNDI CATATG 1 cut(s) 1651
FblI GTMKAC 1 cut(s) 1135
FokI GGATG 4 cut(s) 154, 951, 1007, 1409
FriOI GRGCYC 1 cut(s) 1571
FspBI CTAG 8 cut(s) 327, 669, 747, 867, 945, 1025, 1058, 1530
GlaI GCGC 1 cut(s) 949
GsuI CTGGAG 1 cut(s) 45
HaeII RGCGCY 1 cut(s) 951
HaeIII GGCC 3 cut(s) 148, 1247, 1431
HapII CCGG 3 cut(s) 422, 432, 1151
HgaI GACGC 2 cut(s) 160, 205
HhaI GCGC 1 cut(s) 950
Hin1II CATG 6 cut(s) 98, 341, 389, 533, 1099, 1244
Hin6I GCGC 1 cut(s) 948
HinP1I GCGC 1 cut(s) 948
HindIII AAGCTT 1 cut(s) 1622
HinfI GANTC 2 cut(s) 389, 787
HpaII CCGG 3 cut(s) 422, 432, 1151
HphI GGTGA 2 cut(s) 1299, 1364
Hpy166II GTNNAC 3 cut(s) 1136, 1318, 1535
Hpy188I TCNGA 7 cut(s) 29, 186, 352, 394, 610, 904, 1123
Hpy188III TCNNGA 8 cut(s) 654, 704, 798, 852, 1088, 1263, 1319, 1560
Hpy8I GTNNAC 3 cut(s) 1136, 1318, 1535
Hpy99I CGWCG 2 cut(s) 154, 221
HpyAV CCTTC 7 cut(s) 64, 97, 560, 606, 804, 1055, 1557
HpyCH4III ACNGT 4 cut(s) 889, 1207, 1639, 1680
HpyF10VI GCNNNNNNNGC 8 cut(s) 160, 422, 482, 545, 590, 1532, 1583, 1589
HpyF3I CTNAG 4 cut(s) 138, 585, 783, 1086
Hsp92II CATG 6 cut(s) 98, 341, 389, 533, 1099, 1244
HspAI GCGC 1 cut(s) 948
Kzo9I GATC 6 cut(s) 7, 466, 719, 1301, 1357, 1458
LmnI GCTCC 3 cut(s) 70, 375, 1566
Lsp1109I GCAGC 8 cut(s) 560, 737, 739, 935, 937, 1159, 1162, 1595
LweI GCATC 4 cut(s) 973, 985, 1570, 1601
MaeI CTAG 8 cut(s) 327, 669, 747, 867, 945, 1025, 1058, 1530
MaeIII GTNAC 5 cut(s) 307, 505, 1053, 1414, 1633
MalI GATC 6 cut(s) 9, 468, 721, 1303, 1359, 1460
MboI GATC 6 cut(s) 7, 466, 719, 1301, 1357, 1458
MfeI CAATTG 2 cut(s) 123, 1467
MflI RGATCY 2 cut(s) 466, 719
MhlI GDGCHC 3 cut(s) 701, 1537, 1571
MlsI TGGCCA 1 cut(s) 1247
MluNI TGGCCA 1 cut(s) 1247
Mox20I TGGCCA 1 cut(s) 1247
MscI TGGCCA 1 cut(s) 1247
MseI TTAA 3 cut(s) 399, 1068, 1296
Msp20I TGGCCA 1 cut(s) 1247
MspA1I CMGCKG 2 cut(s) 728, 926
MspI CCGG 3 cut(s) 422, 432, 1151
MspR9I CCNGG 3 cut(s) 145, 1074, 1194
MunI CAATTG 2 cut(s) 123, 1467
Mva1269I GAATGC 2 cut(s) 163, 595
MvaI CCWGG 3 cut(s) 145, 1074, 1194
MwoI GCNNNNNNNGC 8 cut(s) 160, 422, 482, 545, 590, 1532, 1583, 1589
NdeI CATATG 1 cut(s) 1651
NdeII GATC 6 cut(s) 7, 466, 719, 1301, 1357, 1458
NlaIII CATG 6 cut(s) 98, 341, 389, 533, 1099, 1244
NlaIV GGNNCC 2 cut(s) 436, 1568
NmeAIII GCCGAG 1 cut(s) 1612
NmuCI GTSAC 4 cut(s) 505, 1053, 1414, 1633
NspI RCATGY 1 cut(s) 533
PaeI GCATGC 1 cut(s) 533
PctI GAATGC 2 cut(s) 163, 595
PfeI GAWTC 2 cut(s) 389, 787
PfoI TCCNGGA 1 cut(s) 1072
Psp6I CCWGG 3 cut(s) 143, 1072, 1192
PspGI CCWGG 3 cut(s) 143, 1072, 1192
PspN4I GGNNCC 2 cut(s) 436, 1568
PsrI GAACNNNNNNTAC 2 cut(s) 873, 905
PstI CTGCAG 2 cut(s) 727, 925
PsuI RGATCY 2 cut(s) 466, 719
RsaI GTAC 3 cut(s) 493, 882, 1656
RsaNI GTAC 3 cut(s) 492, 881, 1655
SaqAI TTAA 3 cut(s) 399, 1068, 1296
Sau3AI GATC 6 cut(s) 7, 466, 719, 1301, 1357, 1458
ScrFI CCNGG 3 cut(s) 145, 1074, 1194
SduI GDGCHC 3 cut(s) 701, 1537, 1571
SfaNI GCATC 4 cut(s) 973, 985, 1570, 1601
SfcI CTRYAG 2 cut(s) 723, 921
SmlI CTYRAG 1 cut(s) 1502
SmoI CTYRAG 1 cut(s) 1502
SpeI ACTAGT 2 cut(s) 326, 1529
SphI GCATGC 1 cut(s) 533
SsiI CCGC 8 cut(s) 161, 476, 534, 537, 546, 728, 926, 962
SspMI CTAG 8 cut(s) 327, 669, 747, 867, 945, 1025, 1058, 1530
StyD4I CCNGG 3 cut(s) 143, 1072, 1192
StyI CCWWGG 1 cut(s) 866
TaaI ACNGT 4 cut(s) 889, 1207, 1639, 1680
TaqI TCGA 1 cut(s) 1475
TaqII GACCGA 1 cut(s) 1160
TatI WGTACW 2 cut(s) 880, 1654
TauI GCSGC 2 cut(s) 536, 539
TfiI GAWTC 2 cut(s) 389, 787
Tru1I TTAA 3 cut(s) 399, 1068, 1296
Tru9I TTAA 3 cut(s) 399, 1068, 1296
TscAI CASTG 4 cut(s) 271, 1055, 1423, 1675
TseFI GTSAC 4 cut(s) 505, 1053, 1414, 1633
TseI GCWGC 8 cut(s) 548, 725, 752, 923, 950, 1172, 1175, 1583
Tsp45I GTSAC 4 cut(s) 505, 1053, 1414, 1633
TspDTI ATGAA 7 cut(s) 111, 156, 326, 402, 449, 570, 828
TspGWI ACGGA 1 cut(s) 287
TspRI CASTG 4 cut(s) 271, 1055, 1423, 1675
VneI GTGCAC 1 cut(s) 1533
XapI RAATTY 7 cut(s) 111, 346, 365, 408, 604, 617, 815
XceI RCATGY 1 cut(s) 533
XcmI CCANNNNNNNNNTGG 1 cut(s) 101
XmaJI CCTAGG 1 cut(s) 866
XmiI GTMKAC 1 cut(s) 1135
XspI CTAG 8 cut(s) 327, 669, 747, 867, 945, 1025, 1058, 1530
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.