Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0012627

Physical Location & Seq

Genomic Coordinates Reverse (-)

22906470 .. 22909538

Gene Structure 3069 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g31750.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGGCTGAGGAACACGAGAAGCCTGCTGCCTCTGCCGTAGAGGCGCCGTGTGAGGTGGCGGTGGTGGAGTCGGATGCCCCGCCTGCCGAGAAGTCTGTCACCGAGAAGGAAGCTGTACCGGAGCCCGAGGCGGCACCGGAGAAGCCTGCGGGGGTTGTTGAGGAGCCTGCCAAGGCCGAGGAGGAGATTGATCCTAAAATCGTAGCTCAGTCGGTTTCGTTCAAGGAAGAGAGCTACGTCGTTGGTGAGTTGCCTGAGCCGCAGAAGAAGGCTCTCGACGAGCTCAAGCAGTTGATCCAGGAAGCTCTCAACAAGCACGAGTTCACTGCTCCACCAACTCCGCCGCCGGTTAAGGAGGAGGAGAAGCCGGCCGTGGAGGAAGAGAAGAAGGAGGAGGAGAAAGCTGCCGAGCCTGAGGCCCCTGCCCCTGTTTGTGAAGCAGAGCCACCAAAAGCTGAGGAGGCCCCTGCCCCTGTTTGTGAAGCAGAGCCACCAAAAACTGAGGAGGTCAAAACTGAAGAAGCTCAAGAAGCTTGCAAGGCCGAGGAAGTGAAGCCAGAGGAGACCGTGGTTGTGGCCGAGGTGGTTGAGGCTGTTGCTAAAGTTGACGATGACGGCGCCAAGACTGTAGAGGCTATTGAGGAGACTATAGTTGCTGTAGTCCCTGCTCCGGAGGCGGCGACTGAGGAGCCAGCTAAAGAAGCTGAGCCGGCAGTCGAGGCGACTCCGGCGGAGGAGCCGAAGACAGAAGCGGAAGAAGCCCCGGCTCCTTCGGTGGAGCCTGAGGAGGTCTACATATTCGGAATTCCGATCCTCGGTGACGAGCGCAGCGACGTCATTCTGCTTAAGTTCCTGAGGGCTAGGGACTACAAGGTGAAGGATGCCTTCACCATGATCAAGAACACGGTCAGGTGGCGCAAGGAGTTCGGGATCGATGCTCTGCTGGAGGAGGACCTTGGAAGCCACTGGGACAAGGTGGTGTTCACTCACGGTGTGGACAAGGAAGGACACTCTGTGTGCTACAACGTGTTTGGTGAGTTCCAAAACAAAGAGCTGTACCAGAACACTTTTACTGATGAAGAGAAACGGTCCAAGTTCATCAAGTGGAGGATCCAGTTCTTGGAGAAGAGCATCAGGAAATTCGACTTCAACCCTACCGGAATCTCCACCATCGTTCAGGTCAACGATCTCAAAAGCTCTCCCGGACTGTTCAAGAGGGAGCACAACCAGGTCACCAACCAGGCCCTTCAATTGCTTCAGGACAACTACCCTGAGTTCGTTGCCAAACAGGTGTTTATCAATGTGCCATGGTGGTATCTTGCCTTCAATAGAATGATCAGCCCCTTCCTGACCCAGAGGACCAAGAGCAAGTTTGTGTTTGCTGGTCCATCCAAAACTGCAGAAACCCTATTCAAATACATAGCTCCAGAACACGTGCCAGTTCAGTATGGTGGTCTAAGCAAGGAAGGCGAGTGTGAATTCACCACAGCCGACCCTGTCACTGAGGTTACTGTTAAACCAGCTTGCAAGCACACCGTCGAAATTCCAGTTTCTGAGAGTGGTGTTCTTGTTTGGGAAGTGAGAGTGGTGGCTTGGGATGTGAGCTACGGTGCAGAGTTTGTGCCAAGTGCTGAGGATGGTTACACCATCATATTGCAAAAGACTAGAAAGGTCGCCCCGACTGATGAGCCAGTGATCTCAAACAGCTACAAGATCGGGGAGGCAGGGAAGGTTGTCCTCACCATTGATAACCAAAGTTCAAAGAAGAAGAAGCTCCTCTACAGGTCCAAGATCAAGCCTGCCTCTGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0002020 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005794 GO:0005886 GO:0005911 GO:0008150 GO:0009506 GO:0009507 GO:0009536 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0019899 GO:0022414 GO:0030054 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0048046 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051704 GO:0055044 GO:0060560 GO:0071840 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRAL_TRIO CRAL_TRIO_N

Protein Analysis

604

Amino Acids

66.89

Weight (kDa)

4.7

Isoelectric Point (pI)

55.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRAL_TRIO_N	PF03765	275 - 301	2.7e-08	CRAL/TRIO, N-terminal domain
CRAL_TRIO	PF00650	324 - 485	2e-28	CRAL/TRIO domain
GOLD_PATL1_C	PF25099	506 - 590	2.5e-37	Patellin-1-like, C-terminal GOLD domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012627)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g31750
malus_domestica	MD08G1218200.v1.1 MD15G1406000.v1.1
prunus_persica	Prupe.1G555200_v2.0.a1 Prupe.1G555200_v2.0.a1
pyrus_communis	pycom08g18910 pycom15g36280
rosa_chinensis	RchiOBHm_Chr7g0227641
rosa_laevigata	RLG00000001631
rosa_multiflora	Rmu_co8489989.1_g000001 Rmu_sc0041066.1_g000001
rosa_roxburghii	Rroxscaffold_3G00231990
rosa_rugosa	Rorug07G0242500 Rorug07G0242600
rosa_samantha	Rh7AG396100 Rh7BG377700 Rh7CG414800 Rh7DG391700
rosa_wichuraiana	Rw7G032930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	837
AccB1I	GGYRCC	3 cut(s)	43, 133, 617
AccB7I	CCANNNNNTGG	1 cut(s)	1120
AccI	GTMKAC	1 cut(s)	792
AccIII	TCCGGA	1 cut(s)	670
AclWI	GGATC	6 cut(s)	185, 289, 805, 938, 1105, 1118
AcoI	YGGCCR	2 cut(s)	369, 576
AcsI	RAATTY	4 cut(s)	804, 1139, 1478, 1542
AcuI	CTGAAG	2 cut(s)	537, 1241
AcvI	CACGTG	1 cut(s)	1435
AcyI	GRCGYC	3 cut(s)	44, 618, 834
AdeI	CACNNNGTG	2 cut(s)	994, 1015
AfaI	GTAC	2 cut(s)	117, 1058
AfiI	CCNNNNNNNGG	3 cut(s)	670, 815, 1120
AflII	CTTAAG	1 cut(s)	845
AflIII	ACRYGT	2 cut(s)	1026, 1432
AgsI	TTSAA	7 cut(s)	223, 1150, 1213, 1250, 1327, 1414, 1761
AjnI	CCWGG	3 cut(s)	297, 1227, 1239
Alw21I	GWGCWC	2 cut(s)	285, 1224
Alw26I	GTCTC	2 cut(s)	557, 638
AlwI	GGATC	6 cut(s)	185, 289, 805, 938, 1105, 1118
AlwNI	CAGNNNCTG	1 cut(s)	1553
Ama87I	CYCGRG	1 cut(s)	125
Aor13HI	TCCGGA	1 cut(s)	670
AoxI	GGCC	7 cut(s)	174, 369, 417, 462, 540, 576, 1242
ApeKI	GCWGC	3 cut(s)	26, 404, 828
ApoI	RAATTY	4 cut(s)	804, 1139, 1478, 1542
AspLEI	GCGC	4 cut(s)	46, 620, 828, 918
AspS9I	GGNCC	8 cut(s)	418, 463, 952, 1089, 1243, 1359, 1385, 1785
AsuC2I	CCSGG	2 cut(s)	764, 1203
AsuHPI	GGTGA	9 cut(s)	91, 257, 830, 880, 886, 1046, 1225, 1474, 1732
AvaI	CYCGRG	1 cut(s)	125
AvaII	GGWCC	5 cut(s)	952, 1089, 1359, 1385, 1785
AxyI	CCTNAGG	3 cut(s)	414, 783, 854
BamHI	GGATCC	1 cut(s)	1110
BanI	GGYRCC	3 cut(s)	43, 133, 617
BanII	GRGCYC	2 cut(s)	126, 285
BarI	GAAGNNNNNNTAC	4 cut(s)	1307, 1339, 1763, 1795
BauI	CACGAG	2 cut(s)	14, 317
BbrPI	CACGTG	1 cut(s)	1435
BbsI	GAAGAC	1 cut(s)	749
Bbv12I	GWGCWC	2 cut(s)	285, 1224
BbvCI	CCTCAGC	3 cut(s)	6, 456, 1632
BbvI	GCAGC	3 cut(s)	13, 391, 840
BccI	CCATC	4 cut(s)	1178, 1396, 1631, 1655
BceAI	ACGGC	4 cut(s)	20, 31, 356, 631
BcgI	CGANNNNNNTGC	6 cut(s)	5, 39, 308, 342, 907, 941
BciT130I	CCWGG	3 cut(s)	299, 1229, 1241
BclI	TGATCA	2 cut(s)	894, 1335
BcnI	CCSGG	2 cut(s)	764, 1203
BcoDI	GTCTC	2 cut(s)	557, 638
BfaI	CTAG	2 cut(s)	861, 1665
BfmI	CTRYAG	5 cut(s)	627, 648, 657, 1398, 1780
BfoI	RGCGCY	2 cut(s)	47, 621
BfrI	CTTAAG	1 cut(s)	845
BglI	GCCNNNNNGGC	1 cut(s)	41
BisI	GCNGC	7 cut(s)	27, 132, 260, 344, 405, 678, 829
BlpI	GCTNAGC	1 cut(s)	705
BlsI	GCNGC	7 cut(s)	28, 133, 261, 345, 406, 679, 830
Bme1390I	CCNGG	5 cut(s)	299, 764, 1203, 1229, 1241
Bme18I	GGWCC	5 cut(s)	952, 1089, 1359, 1385, 1785
BmeT110I	CYCGRG	1 cut(s)	125
BmgT120I	GGNCC	8 cut(s)	418, 463, 952, 1089, 1243, 1359, 1385, 1785
BmrFI	CCNGG	5 cut(s)	299, 764, 1203, 1229, 1241
BmrI	ACTGGG	1 cut(s)	976
BmsI	GCATC	4 cut(s)	64, 871, 925, 1140
BmuI	ACTGGG	1 cut(s)	976
BpiI	GAAGAC	1 cut(s)	749
BpmI	CTGGAG	2 cut(s)	965, 1410
Bpu10I	CCTNAGC	4 cut(s)	6, 255, 456, 1632
Bpu1102I	GCTNAGC	1 cut(s)	705
BpuEI	CTTGAG	2 cut(s)	269, 510
BpuMI	CCSGG	2 cut(s)	764, 1203
Bsa29I	ATCGAT	1 cut(s)	933
BsaAI	YACGTR	1 cut(s)	1435
BsaHI	GRCGYC	3 cut(s)	44, 618, 834
BsaI	GGTCTC	1 cut(s)	557
BsaWI	WCCGGW	4 cut(s)	118, 136, 670, 1157
Bsc4I	CCNNNNNNNGG	3 cut(s)	670, 815, 1120
Bse118I	RCCGGY	3 cut(s)	346, 367, 709
Bse1I	ACTGG	5 cut(s)	971, 1114, 1439, 1547, 1691
Bse21I	CCTNAGG	3 cut(s)	414, 783, 854
BseAI	TCCGGA	1 cut(s)	670
BseBI	CCWGG	3 cut(s)	299, 1229, 1241
BseCI	ATCGAT	1 cut(s)	933
BseGI	GGATG	5 cut(s)	79, 886, 1388, 1603, 1642
BseLI	CCNNNNNNNGG	3 cut(s)	670, 815, 1120
BseNI	ACTGG	5 cut(s)	971, 1114, 1439, 1547, 1691
BseX3I	CGGCCG	1 cut(s)	369
BseXI	GCAGC	3 cut(s)	13, 391, 840
BsgI	GTGCAG	1 cut(s)	1632
Bsh1285I	CGRYCG	1 cut(s)	372
BshFI	GGCC	7 cut(s)	176, 371, 419, 464, 542, 578, 1244
BshNI	GGYRCC	3 cut(s)	43, 133, 617
BshVI	ATCGAT	1 cut(s)	933
BsiEI	CGRYCG	1 cut(s)	372
BsiHKAI	GWGCWC	2 cut(s)	285, 1224
BsiHKCI	CYCGRG	1 cut(s)	125
BslFI	GGGAC	3 cut(s)	647, 878, 983
BslI	CCNNNNNNNGG	3 cut(s)	670, 815, 1120
BsmAI	GTCTC	2 cut(s)	557, 638
BsmFI	GGGAC	3 cut(s)	647, 878, 983
BsnI	GGCC	7 cut(s)	176, 371, 419, 464, 542, 578, 1244
Bso31I	GGTCTC	1 cut(s)	557
BsoBI	CYCGRG	1 cut(s)	125
Bsp1286I	GDGCHC	3 cut(s)	126, 285, 1224
Bsp13I	TCCGGA	1 cut(s)	670
Bsp1720I	GCTNAGC	1 cut(s)	705
Bsp19I	CCATGG	1 cut(s)	1307
BspANI	GGCC	7 cut(s)	176, 371, 419, 464, 542, 578, 1244
BspDI	ATCGAT	1 cut(s)	933
BspEI	TCCGGA	1 cut(s)	670
BspMAI	CTGCAG	1 cut(s)	1402
BspPI	GGATC	6 cut(s)	185, 289, 805, 938, 1105, 1118
BspQI	GCTCTTC	1 cut(s)	1121
BspT107I	GGYRCC	3 cut(s)	43, 133, 617
BspTI	CTTAAG	1 cut(s)	845
BspTNI	GGTCTC	1 cut(s)	557
BsrFI	RCCGGY	3 cut(s)	346, 367, 709
BsrI	ACTGG	5 cut(s)	971, 1114, 1439, 1547, 1691
BssAI	RCCGGY	3 cut(s)	346, 367, 709
BssNI	GRCGYC	3 cut(s)	44, 618, 834
BssSI	CACGAG	2 cut(s)	14, 317
BssT1I	CCWWGG	3 cut(s)	171, 955, 1307
Bst2BI	CACGAG	2 cut(s)	14, 317
Bst2UI	CCWGG	3 cut(s)	299, 1229, 1241
Bst4CI	ACNGT	9 cut(s)	568, 628, 907, 992, 1089, 1209, 1513, 1537, 1610
Bst6I	CTCTTC	4 cut(s)	222, 375, 1074, 1121
BstACI	GRCGYC	3 cut(s)	44, 618, 834
BstAFI	CTTAAG	1 cut(s)	845
BstBAI	YACGTR	1 cut(s)	1435
BstDSI	CCRYGG	3 cut(s)	372, 567, 1307
BstEII	GGTNACC	1 cut(s)	1231
BstF5I	GGATG	5 cut(s)	79, 886, 1388, 1603, 1642
BstH2I	RGCGCY	2 cut(s)	47, 621
BstHHI	GCGC	4 cut(s)	46, 620, 828, 918
BstMAI	GTCTC	2 cut(s)	557, 638
BstMCI	CGRYCG	1 cut(s)	372
BstNI	CCWGG	3 cut(s)	299, 1229, 1241
BstPI	GGTNACC	1 cut(s)	1231
BstSCI	CCNGG	5 cut(s)	297, 762, 1201, 1227, 1239
BstSFI	CTRYAG	5 cut(s)	627, 648, 657, 1398, 1780
BstV1I	GCAGC	3 cut(s)	13, 391, 840
BstV2I	GAAGAC	1 cut(s)	749
BstX2I	RGATCY	1 cut(s)	1110
BstYI	RGATCY	1 cut(s)	1110
BstZI	CGGCCG	1 cut(s)	369
Bsu15I	ATCGAT	1 cut(s)	933
Bsu36I	CCTNAGG	3 cut(s)	414, 783, 854
BsuRI	GGCC	7 cut(s)	176, 371, 419, 464, 542, 578, 1244
BsuTUI	ATCGAT	1 cut(s)	933
BtgI	CCRYGG	3 cut(s)	372, 567, 1307
BtsCI	GGATG	5 cut(s)	79, 886, 1388, 1603, 1642
BtsI	GCAGTG	1 cut(s)	324
BtsIMutI	CAGTG	4 cut(s)	324, 964, 1500, 1698
CaiI	CAGNNNCTG	1 cut(s)	1553
CfoI	GCGC	4 cut(s)	46, 620, 828, 918
Cfr10I	RCCGGY	3 cut(s)	346, 367, 709
Cfr13I	GGNCC	8 cut(s)	418, 463, 952, 1089, 1243, 1359, 1385, 1785
ClaI	ATCGAT	1 cut(s)	933
CsiI	ACCWGGT	1 cut(s)	1227
Csp6I	GTAC	2 cut(s)	116, 1057
CviAII	CATG	2 cut(s)	892, 1308
CviQI	GTAC	2 cut(s)	116, 1057
DinI	GGCGCC	2 cut(s)	45, 619
DraIII	CACNNNGTG	2 cut(s)	994, 1015
EaeI	YGGCCR	2 cut(s)	369, 576
EagI	CGGCCG	1 cut(s)	369
Eam1104I	CTCTTC	4 cut(s)	222, 375, 1074, 1121
EarI	CTCTTC	4 cut(s)	222, 375, 1074, 1121
EciI	GGCGGA	2 cut(s)	330, 746
Ecl136II	GAGCTC	1 cut(s)	283
EclXI	CGGCCG	1 cut(s)	369
Eco130I	CCWWGG	3 cut(s)	171, 955, 1307
Eco24I	GRGCYC	2 cut(s)	126, 285
Eco31I	GGTCTC	1 cut(s)	557
Eco47I	GGWCC	5 cut(s)	952, 1089, 1359, 1385, 1785
Eco52I	CGGCCG	1 cut(s)	369
Eco53kI	GAGCTC	1 cut(s)	283
Eco57I	CTGAAG	2 cut(s)	537, 1241
Eco72I	CACGTG	1 cut(s)	1435
Eco81I	CCTNAGG	3 cut(s)	414, 783, 854
Eco88I	CYCGRG	1 cut(s)	125
Eco91I	GGTNACC	1 cut(s)	1231
EcoICRI	GAGCTC	1 cut(s)	283
EcoO109I	RGGNCCY	4 cut(s)	418, 463, 952, 1243
EcoO65I	GGTNACC	1 cut(s)	1231
EcoRI	GAATTC	2 cut(s)	804, 1478
EcoRII	CCWGG	3 cut(s)	297, 1227, 1239
EcoT14I	CCWWGG	3 cut(s)	171, 955, 1307
EcoT38I	GRGCYC	2 cut(s)	126, 285
EgeI	GGCGCC	2 cut(s)	45, 619
EheI	GGCGCC	2 cut(s)	45, 619
ErhI	CCWWGG	3 cut(s)	171, 955, 1307
FaeI	CATG	2 cut(s)	895, 1311
FaiI	YATR	7 cut(s)	650, 797, 893, 1309, 1421, 1449, 1652
FalI	AAGNNNNNCTT	2 cut(s)	869, 901
FaqI	GGGAC	3 cut(s)	647, 878, 983
FatI	CATG	2 cut(s)	891, 1307
FauI	CCCGC	2 cut(s)	87, 142
FbaI	TGATCA	2 cut(s)	894, 1335
FblI	GTMKAC	1 cut(s)	792
Fnu4HI	GCNGC	7 cut(s)	27, 132, 260, 344, 405, 678, 829
FokI	GGATG	5 cut(s)	86, 893, 1375, 1610, 1649
FriOI	GRGCYC	2 cut(s)	126, 285
Fsp4HI	GCNGC	7 cut(s)	27, 132, 260, 344, 405, 678, 829
FspBI	CTAG	2 cut(s)	861, 1665
GlaI	GCGC	4 cut(s)	45, 619, 827, 917
GluI	GCNGC	7 cut(s)	27, 132, 260, 344, 405, 678, 829
GsuI	CTGGAG	2 cut(s)	965, 1410
HaeII	RGCGCY	2 cut(s)	47, 621
HaeIII	GGCC	7 cut(s)	176, 371, 419, 464, 542, 578, 1244
HhaI	GCGC	4 cut(s)	46, 620, 828, 918
Hin1I	GRCGYC	3 cut(s)	44, 618, 834
Hin1II	CATG	2 cut(s)	895, 1311
Hin6I	GCGC	4 cut(s)	44, 618, 826, 916
HinP1I	GCGC	4 cut(s)	44, 618, 826, 916
HincII	GTYRAC	2 cut(s)	607, 1183
HindII	GTYRAC	2 cut(s)	607, 1183
HindIII	AAGCTT	1 cut(s)	531
HinfI	GANTC	3 cut(s)	68, 724, 1161
HphI	GGTGA	9 cut(s)	91, 257, 830, 880, 886, 1046, 1225, 1474, 1732
Hpy166II	GTNNAC	6 cut(s)	324, 607, 793, 984, 997, 1183
Hpy188I	TCNGA	5 cut(s)	73, 803, 810, 1555, 1807
Hpy8I	GTNNAC	6 cut(s)	324, 607, 793, 984, 997, 1183
Hpy99I	CGWCG	4 cut(s)	242, 281, 836, 1541
HpyCH4III	ACNGT	9 cut(s)	568, 628, 907, 992, 1089, 1209, 1513, 1537, 1610
HpyCH4IV	ACGT	4 cut(s)	237, 834, 1026, 1434
HpyCH4V	TGCA	5 cut(s)	537, 1400, 1527, 1613, 1657
HpySE526I	ACGT	4 cut(s)	237, 834, 1026, 1434
Hsp92I	GRCGYC	3 cut(s)	44, 618, 834
Hsp92II	CATG	2 cut(s)	895, 1311
HspAI	GCGC	4 cut(s)	44, 618, 826, 916
KasI	GGCGCC	2 cut(s)	43, 617
Kpn2I	TCCGGA	1 cut(s)	670
KroI	GCCGGC	2 cut(s)	367, 709
KroNI	GCCGGC	2 cut(s)	369, 711
Ksp22I	TGATCA	2 cut(s)	894, 1335
LguI	GCTCTTC	1 cut(s)	1121
Lsp1109I	GCAGC	3 cut(s)	13, 391, 840
LweI	GCATC	4 cut(s)	64, 871, 925, 1140
MabI	ACCWGGT	1 cut(s)	1227
MaeI	CTAG	2 cut(s)	861, 1665
MaeII	ACGT	4 cut(s)	237, 834, 1026, 1434
MaeIII	GTNAC	6 cut(s)	97, 818, 1231, 1498, 1507, 1640
MfeI	CAATTG	1 cut(s)	1250
MflI	RGATCY	1 cut(s)	1110
MhlI	GDGCHC	3 cut(s)	126, 285, 1224
MluCI	AATT	5 cut(s)	804, 1139, 1250, 1478, 1542
Mly113I	GGCGCC	2 cut(s)	44, 618
MlyI	GAGTC	2 cut(s)	77, 718
MmeI	TCCRAC	1 cut(s)	51
MroI	TCCGGA	1 cut(s)	670
MroNI	GCCGGC	2 cut(s)	367, 709
MseI	TTAA	3 cut(s)	351, 846, 1515
MspCI	CTTAAG	1 cut(s)	845
MspR9I	CCNGG	5 cut(s)	299, 764, 1203, 1229, 1241
MunI	CAATTG	1 cut(s)	1250
MvaI	CCWGG	3 cut(s)	299, 1229, 1241
NaeI	GCCGGC	2 cut(s)	369, 711
NarI	GGCGCC	2 cut(s)	44, 618
NciI	CCSGG	2 cut(s)	764, 1203
NcoI	CCATGG	1 cut(s)	1307
NgoMIV	GCCGGC	2 cut(s)	367, 709
NlaIII	CATG	2 cut(s)	895, 1311
NmeAIII	GCCGAG	5 cut(s)	112, 202, 433, 568, 604
NmuCI	GTSAC	4 cut(s)	97, 818, 1231, 1498
PciSI	GCTCTTC	1 cut(s)	1121
PcsI	WCGNNNNNNNCGW	1 cut(s)	828
PdiI	GCCGGC	2 cut(s)	369, 711
PfeI	GAWTC	1 cut(s)	1161
PflFI	GACNNNGTC	1 cut(s)	1496
PflMI	CCANNNNNTGG	1 cut(s)	1120
PfoI	TCCNGGA	2 cut(s)	297, 1201
PkrI	GCNGC	7 cut(s)	28, 133, 261, 345, 406, 679, 830
PleI	GAGTC	2 cut(s)	76, 718
PluTI	GGCGCC	2 cut(s)	47, 621
PmaCI	CACGTG	1 cut(s)	1435
PmlI	CACGTG	1 cut(s)	1435
PpsI	GAGTC	2 cut(s)	76, 718
Ppu21I	YACGTR	1 cut(s)	1435
PpuMI	RGGWCCY	1 cut(s)	952
Psp124BI	GAGCTC	1 cut(s)	285
Psp5II	RGGWCCY	1 cut(s)	952
Psp6I	CCWGG	3 cut(s)	297, 1227, 1239
PspCI	CACGTG	1 cut(s)	1435
PspEI	GGTNACC	1 cut(s)	1231
PspGI	CCWGG	3 cut(s)	297, 1227, 1239
PspPI	GGNCC	8 cut(s)	418, 463, 952, 1089, 1243, 1359, 1385, 1785
PspPPI	RGGWCCY	1 cut(s)	952
PstI	CTGCAG	1 cut(s)	1402
PstNI	CAGNNNCTG	1 cut(s)	1553
PsuI	RGATCY	1 cut(s)	1110
PsyI	GACNNNGTC	1 cut(s)	1496
RsaI	GTAC	2 cut(s)	117, 1058
RsaNI	GTAC	2 cut(s)	116, 1057
SacI	GAGCTC	1 cut(s)	285
SapI	GCTCTTC	1 cut(s)	1121
SaqAI	TTAA	3 cut(s)	351, 846, 1515
SatI	GCNGC	7 cut(s)	27, 132, 260, 344, 405, 678, 829
Sau96I	GGNCC	8 cut(s)	418, 463, 952, 1089, 1243, 1359, 1385, 1785
SchI	GAGTC	2 cut(s)	77, 718
ScrFI	CCNGG	5 cut(s)	299, 764, 1203, 1229, 1241
SduI	GDGCHC	3 cut(s)	126, 285, 1224
SexAI	ACCWGGT	1 cut(s)	1227
SfaNI	GCATC	4 cut(s)	64, 871, 925, 1140
SfcI	CTRYAG	5 cut(s)	627, 648, 657, 1398, 1780
SfoI	GGCGCC	2 cut(s)	45, 619
SinI	GGWCC	5 cut(s)	952, 1089, 1359, 1385, 1785
SmlI	CTYRAG	3 cut(s)	284, 525, 845
SmoI	CTYRAG	3 cut(s)	284, 525, 845
Sse9I	AATT	5 cut(s)	804, 1139, 1250, 1478, 1542
SspDI	GGCGCC	2 cut(s)	43, 617
SspMI	CTAG	2 cut(s)	861, 1665
SstI	GAGCTC	1 cut(s)	285
StyD4I	CCNGG	5 cut(s)	297, 762, 1201, 1227, 1239
StyI	CCWWGG	3 cut(s)	171, 955, 1307
TaaI	ACNGT	9 cut(s)	568, 628, 907, 992, 1089, 1209, 1513, 1537, 1610
TaiI	ACGT	4 cut(s)	240, 837, 1029, 1437
TaqI	TCGA	5 cut(s)	276, 717, 933, 1143, 1539
TasI	AATT	5 cut(s)	804, 1139, 1250, 1478, 1542
TauI	GCSGC	4 cut(s)	134, 262, 346, 680
TfiI	GAWTC	1 cut(s)	1161
Tru1I	TTAA	3 cut(s)	351, 846, 1515
Tru9I	TTAA	3 cut(s)	351, 846, 1515
TscAI	CASTG	4 cut(s)	331, 971, 1507, 1698
TseFI	GTSAC	4 cut(s)	97, 818, 1231, 1498
TseI	GCWGC	3 cut(s)	26, 404, 828
Tsp45I	GTSAC	4 cut(s)	97, 818, 1231, 1498
TspDTI	ATGAA	2 cut(s)	1087, 1092
TspRI	CASTG	4 cut(s)	331, 971, 1507, 1698
Tth111I	GACNNNGTC	1 cut(s)	1496
Van91I	CCANNNNNTGG	1 cut(s)	1120
Vha464I	CTTAAG	1 cut(s)	845
VpaK11BI	GGWCC	5 cut(s)	952, 1089, 1359, 1385, 1785
XapI	RAATTY	4 cut(s)	804, 1139, 1478, 1542
XmiI	GTMKAC	1 cut(s)	792
XspI	CTAG	2 cut(s)	861, 1665
ZraI	GACGTC	1 cut(s)	835

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.