Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0012627

Physical Location & Seq

Genomic Coordinates Forward (+)

18512283 .. 18514507

Gene Structure 2225 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000001631

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1797 bp

ATGGCTGAGGAACACGAGAAGCCTTCTGCCTCTGCTGTGGAGGCACCGTGTGAGGTGGCGGTGGTGGAGTCGGAGGCGCCGCCTGCCGAGAAGTCTGTGACCGAGAAAGAAGCTGTGCCGGAGCCGGAGCCGGAGCCGGAGGCCAAGCCTGCCAAGGAGGTCGTTGAGGAGGCGGAGAAACCTGCCAAGGCTGAGGAAGAGGCTGATCCTAAAATCGTAGCTCAATCGGTTTCATTCAAGGAAGAGAGCTACGTGGTTGGTGAGCTCCCCGAGCCGCAGAAGAAGGCTCTGGAGGAGCTGAAGCAGCTCATCCAGGAGGCCCTCAACAAGCACGAGTTCACGGCGCCGCCGACTCCACCGCCGGTTAAGGAGGAGGAGAAGCCGGCTGTGGAGGAAGAAAAGAAGGAGGAGGAAAAAGCTGCCGAGCCTGAGGGCCCTGCCCCTGTTTCTGAAGCAGAGGCACCAAAAACTGAAGAGGCACCAAAAACTGAAGAAGCTCCAGAAGCTTCCAAGTGCGAGGAAGTGAAACCAGAGGAGGAGGTGAAAGAAGAGAAGACCGTTGTTGTGACTGAGGTGGTTGAGACTGTTACCAAGGTTGACGATGACGGCGCCAAGACTGTGGAGGCGATTGAGGAGACCATAGTGGCCGCAGTCCCTACTCCGGCGGCGGCGACCGAAGAACCAGCCAAGGAAGTCGAGGCGACTCCACCGGCGGAGGAGCCGAAAAAAGAAGCGGAAGAGGCCCCGGCTGCCCCTCCGGTGGAACCAGAGGAGGTCTACGTCTTTGGAATCCCAATTCTCGGTGACGAGCGCAGCGACGTCATTCTGCTCAAGTTCCTGAGGGCTAGGGATTTCAAGGTGAAGGACGCCTTCGCCATGATCAAGAACACCGTGAAGTGGCGCAAGGAGTTCGGGATCGACGCCCTGCTGGAAGAGGAGCTCGGAAGCCACTGGGAGAAGGTGGTGTTCACTCACGGCGTCGACAAGGAAGGCCACCCTGTGTGCTACAACGTGTTTGGTGAATTCCAGAACAAAGAGCTGTACCAGAACACCTTCACTGATGAAGAGAAACGGTCCAAGTTCATCAAGTGGAGGATCCAGTTCTTGGAGAAGAGCATCAGAAAATTCGACTTCAACCCTACCGGAATCTCCACCATCGTTCAGGTCAACGATATCAAAAACTCTCCCGGACTCTTCAAGAGGGAGCACAACCAGGTCACCAACCAGGCTCTTCAATTGCTTCAGGACAACTACCCTGAGTTCGTTGCCAAACAGGTGTTTATCAATGTGCCATGGTGGTACCTTGCTTTCAATAGGATGATCAGCCCCTTCCTGACCCAGAGGACCAAGAGCAAGTTTGTGTTTGCTGGTCCATCCAAATCCGCCGAGACCCTATTCAAATACATAGCTCCAGAACGTGTGCCAGTTCAGTATGGTGGTCTAAGCAAGGAAGGCGAATGTGAATTCACCACAGCCGACCCTGTCACAGAGGTTACTGTTAAACCAGCTTGCAAACACACCGTTGAAATCCCAGTTTCTGAGAGTGGTGTTCTTGTTTGGGAAGTGAGAGTATTGGCTTGGGATGTGAGCTACGGAGCCGAGTTTGTGCCAAGTGCTGAAGATGCTTACACAATCATATTGCAAAAGACTAGAAAGGTTGCCCCAAGCGATGAGCCAGTGATCTCGAACAGCTTCAAGATCGGCGAGCCAGGGAAGGTTGTGCTCACCATTGACAACCAAAGTTCCAAGAAGAAAAAGCTCCTCTACAGGTCCAAGACCAAGCCTTCCTCTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0002020 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005794 GO:0005886 GO:0005911 GO:0008150 GO:0009506 GO:0009507 GO:0009536 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0019899 GO:0022414 GO:0030054 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0048046 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051704 GO:0055044 GO:0060560 GO:0071840 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRAL_TRIO CRAL_TRIO_N

Protein Analysis

599

Amino Acids

66.68

Weight (kDa)

4.79

Isoelectric Point (pI)

54.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRAL_TRIO_N	PF03765	270 - 296	1e-08	CRAL/TRIO, N-terminal domain
CRAL_TRIO	PF00650	319 - 480	1.8e-29	CRAL/TRIO domain
GOLD_PATL1_C	PF25099	501 - 585	8.6e-38	Patellin-1-like, C-terminal GOLD domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012627)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g31750
malus_domestica	MD08G1218200.v1.1 MD15G1406000.v1.1
prunus_persica	Prupe.1G555200_v2.0.a1 Prupe.1G555200_v2.0.a1
pyrus_communis	pycom08g18910 pycom15g36280
rosa_chinensis	RchiOBHm_Chr7g0227641
rosa_laevigata	RLG00000001631
rosa_multiflora	Rmu_co8489989.1_g000001 Rmu_sc0041066.1_g000001
rosa_roxburghii	Rroxscaffold_3G00231990
rosa_rugosa	Rorug07G0242500 Rorug07G0242600
rosa_samantha	Rh7AG396100 Rh7BG377700 Rh7CG414800 Rh7DG391700
rosa_wichuraiana	Rw7G032930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	822
Acc36I	ACCTGC	1 cut(s)	190
Acc65I	GGTACC	1 cut(s)	1299
AccB1I	GGYRCC	7 cut(s)	43, 76, 343, 460, 478, 608, 1299
AccB7I	CCANNNNNTGG	1 cut(s)	1105
AccI	GTMKAC	2 cut(s)	777, 981
AclWI	GGATC	4 cut(s)	200, 923, 1090, 1103
AcoI	YGGCCR	1 cut(s)	645
AcsI	RAATTY	3 cut(s)	1022, 1124, 1463
AcuI	CTGAAG	6 cut(s)	320, 471, 492, 510, 1226, 1638
AcyI	GRCGYC	7 cut(s)	77, 344, 609, 819, 867, 921, 978
AdeI	CACNNNGTG	2 cut(s)	50, 1000
AfaI	GTAC	2 cut(s)	1043, 1301
AfiI	CCNNNNNNNGG	5 cut(s)	661, 760, 800, 897, 1105
AflIII	ACRYGT	2 cut(s)	1011, 1417
AgsI	TTSAA	9 cut(s)	238, 856, 1135, 1198, 1235, 1312, 1399, 1526, 1696
AjnI	CCWGG	4 cut(s)	312, 1212, 1224, 1708
Alw21I	GWGCWC	4 cut(s)	267, 942, 1209, 1725
Alw26I	GTCTC	3 cut(s)	575, 629, 1382
AlwI	GGATC	4 cut(s)	200, 923, 1090, 1103
AlwNI	CAGNNNCTG	1 cut(s)	1538
Ama87I	CYCGRG	1 cut(s)	269
AoxI	GGCC	6 cut(s)	141, 318, 433, 645, 741, 991
ApaI	GGGCCC	1 cut(s)	437
ApeKI	GCWGC	4 cut(s)	304, 419, 749, 813
ApoI	RAATTY	3 cut(s)	1022, 1124, 1463
Asp700I	GAANNNNTTC	2 cut(s)	1052, 1691
Asp718I	GGTACC	1 cut(s)	1299
AspLEI	GCGC	5 cut(s)	79, 346, 611, 813, 903
AspS9I	GGNCC	8 cut(s)	319, 433, 434, 742, 1074, 1344, 1370, 1770
AsuC2I	CCSGG	2 cut(s)	746, 1188
AsuHPI	GGTGA	8 cut(s)	272, 553, 815, 871, 1031, 1210, 1459, 1717
AvaI	CYCGRG	1 cut(s)	269
AvaII	GGWCC	4 cut(s)	1074, 1344, 1370, 1770
AxyI	CCTNAGG	2 cut(s)	429, 839
BaeGI	GKGCMC	1 cut(s)	437
BamHI	GGATCC	1 cut(s)	1095
BanI	GGYRCC	7 cut(s)	43, 76, 343, 460, 478, 608, 1299
BanII	GRGCYC	3 cut(s)	267, 437, 942
BauI	CACGAG	2 cut(s)	14, 332
BbsI	GAAGAC	1 cut(s)	560
Bbv12I	GWGCWC	4 cut(s)	267, 942, 1209, 1725
BbvCI	CCTCAGC	2 cut(s)	6, 192
BbvI	GCAGC	4 cut(s)	316, 406, 736, 825
BccI	CCATC	2 cut(s)	1163, 1381
BceAI	ACGGC	3 cut(s)	357, 622, 991
BcgI	CGANNNNNNTGC	2 cut(s)	892, 926
BciT130I	CCWGG	4 cut(s)	314, 1214, 1226, 1710
BclI	TGATCA	2 cut(s)	879, 1320
BcnI	CCSGG	2 cut(s)	746, 1188
BcoDI	GTCTC	3 cut(s)	575, 629, 1382
BfaI	CTAG	2 cut(s)	846, 1650
BfmI	CTRYAG	1 cut(s)	1765
BfoI	RGCGCY	3 cut(s)	80, 347, 612
BfuAI	ACCTGC	1 cut(s)	190
Bme1390I	CCNGG	6 cut(s)	314, 746, 1188, 1214, 1226, 1710
Bme18I	GGWCC	4 cut(s)	1074, 1344, 1370, 1770
BmeT110I	CYCGRG	1 cut(s)	269
BmgT120I	GGNCC	8 cut(s)	319, 433, 434, 742, 1074, 1344, 1370, 1770
BmrFI	CCNGG	6 cut(s)	314, 746, 1188, 1214, 1226, 1710
BmrI	ACTGGG	2 cut(s)	961, 1526
BmsI	GCATC	2 cut(s)	1125, 1612
BmuI	ACTGGG	2 cut(s)	961, 1526
BpiI	GAAGAC	1 cut(s)	560
BpmI	CTGGAG	3 cut(s)	311, 483, 1395
Bpu10I	CCTNAGC	2 cut(s)	6, 192
BpuEI	CTTGAG	1 cut(s)	815
BpuMI	CCSGG	2 cut(s)	746, 1188
BsaAI	YACGTR	1 cut(s)	253
BsaHI	GRCGYC	7 cut(s)	77, 344, 609, 819, 867, 921, 978
BsaI	GGTCTC	2 cut(s)	629, 1382
BsaJI	CCNNGG	7 cut(s)	153, 186, 591, 687, 744, 1292, 1709
BsaWI	WCCGGW	2 cut(s)	757, 1142
BsaXI	ACNNNNNCTCC	2 cut(s)	32, 62
Bsc4I	CCNNNNNNNGG	5 cut(s)	661, 760, 800, 897, 1105
Bse118I	RCCGGY	3 cut(s)	361, 382, 709
Bse1I	ACTGG	5 cut(s)	956, 1099, 1424, 1532, 1676
Bse21I	CCTNAGG	2 cut(s)	429, 839
BseBI	CCWGG	4 cut(s)	314, 1214, 1226, 1710
BseDI	CCNNGG	7 cut(s)	153, 186, 591, 687, 744, 1292, 1709
BseGI	GGATG	4 cut(s)	309, 1323, 1373, 1588
BseLI	CCNNNNNNNGG	5 cut(s)	661, 760, 800, 897, 1105
BseMII	CTCAG	6 cut(s)	183, 420, 561, 830, 1248, 1530
BseNI	ACTGG	5 cut(s)	956, 1099, 1424, 1532, 1676
BseSI	GKGCMC	1 cut(s)	437
BseXI	GCAGC	4 cut(s)	316, 406, 736, 825
Bsh1285I	CGRYCG	1 cut(s)	675
BshFI	GGCC	6 cut(s)	143, 320, 435, 647, 743, 993
BshNI	GGYRCC	7 cut(s)	43, 76, 343, 460, 478, 608, 1299
BsiEI	CGRYCG	1 cut(s)	675
BsiHKAI	GWGCWC	4 cut(s)	267, 942, 1209, 1725
BsiHKCI	CYCGRG	1 cut(s)	269
BslFI	GGGAC	1 cut(s)	638
BslI	CCNNNNNNNGG	5 cut(s)	661, 760, 800, 897, 1105
BsmAI	GTCTC	3 cut(s)	575, 629, 1382
BsmFI	GGGAC	1 cut(s)	638
BsnI	GGCC	6 cut(s)	143, 320, 435, 647, 743, 993
Bso31I	GGTCTC	2 cut(s)	629, 1382
BsoBI	CYCGRG	1 cut(s)	269
Bsp120I	GGGCCC	1 cut(s)	433
Bsp1286I	GDGCHC	5 cut(s)	267, 437, 942, 1209, 1725
Bsp143I	GATC	7 cut(s)	205, 879, 915, 1095, 1320, 1680, 1698
Bsp19I	CCATGG	1 cut(s)	1292
BspANI	GGCC	6 cut(s)	143, 320, 435, 647, 743, 993
BspCNI	CTCAG	6 cut(s)	184, 421, 562, 831, 1249, 1531
BspMI	ACCTGC	1 cut(s)	190
BspPI	GGATC	4 cut(s)	200, 923, 1090, 1103
BspQI	GCTCTTC	2 cut(s)	1106, 1236
BspT107I	GGYRCC	7 cut(s)	43, 76, 343, 460, 478, 608, 1299
BspTNI	GGTCTC	2 cut(s)	629, 1382
BsrFI	RCCGGY	3 cut(s)	361, 382, 709
BsrI	ACTGG	5 cut(s)	956, 1099, 1424, 1532, 1676
BssAI	RCCGGY	3 cut(s)	361, 382, 709
BssECI	CCNNGG	7 cut(s)	153, 186, 591, 687, 744, 1292, 1709
BssMI	GATC	7 cut(s)	205, 879, 915, 1095, 1320, 1680, 1698
BssNI	GRCGYC	7 cut(s)	77, 344, 609, 819, 867, 921, 978
BssSI	CACGAG	2 cut(s)	14, 332
BssT1I	CCWWGG	5 cut(s)	153, 186, 591, 687, 1292
Bst2BI	CACGAG	2 cut(s)	14, 332
Bst2UI	CCWGG	4 cut(s)	314, 1214, 1226, 1710
Bst4CI	ACNGT	8 cut(s)	48, 559, 586, 619, 892, 1074, 1498, 1522
BstACI	GRCGYC	7 cut(s)	77, 344, 609, 819, 867, 921, 978
BstBAI	YACGTR	1 cut(s)	253
BstC8I	GCNNGC	5 cut(s)	84, 150, 384, 1510, 1706
BstDEI	CTNAG	8 cut(s)	6, 192, 429, 570, 839, 1257, 1442, 1539
BstDSI	CCRYGG	1 cut(s)	1292
BstEII	GGTNACC	1 cut(s)	1216
BstF5I	GGATG	4 cut(s)	309, 1323, 1373, 1588
BstH2I	RGCGCY	3 cut(s)	80, 347, 612
BstHHI	GCGC	5 cut(s)	79, 346, 611, 813, 903
BstKTI	GATC	7 cut(s)	208, 882, 918, 1098, 1323, 1683, 1701
BstMAI	GTCTC	3 cut(s)	575, 629, 1382
BstMBI	GATC	7 cut(s)	205, 879, 915, 1095, 1320, 1680, 1698
BstMCI	CGRYCG	1 cut(s)	675
BstNI	CCWGG	4 cut(s)	314, 1214, 1226, 1710
BstPI	GGTNACC	1 cut(s)	1216
BstSCI	CCNGG	6 cut(s)	312, 744, 1186, 1212, 1224, 1708
BstSFI	CTRYAG	1 cut(s)	1765
BstSLI	GKGCMC	1 cut(s)	437
BstV1I	GCAGC	4 cut(s)	316, 406, 736, 825
BstV2I	GAAGAC	1 cut(s)	560
BstX2I	RGATCY	1 cut(s)	1095
BstXI	CCANNNNNNTGG	1 cut(s)	619
BstYI	RGATCY	1 cut(s)	1095
Bsu36I	CCTNAGG	2 cut(s)	429, 839
BsuRI	GGCC	6 cut(s)	143, 320, 435, 647, 743, 993
BtgI	CCRYGG	1 cut(s)	1292
BtgZI	GCGATG	1 cut(s)	1683
BtsCI	GGATG	4 cut(s)	309, 1323, 1373, 1588
BtsIMutI	CAGTG	3 cut(s)	949, 1056, 1683
BveI	ACCTGC	1 cut(s)	190
Cac8I	GCNNGC	5 cut(s)	84, 150, 384, 1510, 1706
CaiI	CAGNNNCTG	1 cut(s)	1538
CfoI	GCGC	5 cut(s)	79, 346, 611, 813, 903
Cfr10I	RCCGGY	3 cut(s)	361, 382, 709
Cfr13I	GGNCC	8 cut(s)	319, 433, 434, 742, 1074, 1344, 1370, 1770
CseI	GACGC	3 cut(s)	875, 929, 967
CsiI	ACCWGGT	1 cut(s)	1212
Csp6I	GTAC	2 cut(s)	1042, 1300
CviAII	CATG	2 cut(s)	877, 1293
CviQI	GTAC	2 cut(s)	1042, 1300
DdeI	CTNAG	8 cut(s)	6, 192, 429, 570, 839, 1257, 1442, 1539
DinI	GGCGCC	3 cut(s)	78, 345, 610
DpnI	GATC	7 cut(s)	207, 881, 917, 1097, 1322, 1682, 1700
DpnII	GATC	7 cut(s)	205, 879, 915, 1095, 1320, 1680, 1698
DraIII	CACNNNGTG	2 cut(s)	50, 1000
EaeI	YGGCCR	1 cut(s)	645
EciI	GGCGGA	3 cut(s)	188, 728, 1372
Ecl136II	GAGCTC	2 cut(s)	265, 940
Eco130I	CCWWGG	5 cut(s)	153, 186, 591, 687, 1292
Eco24I	GRGCYC	3 cut(s)	267, 437, 942
Eco31I	GGTCTC	2 cut(s)	629, 1382
Eco32I	GATATC	1 cut(s)	1174
Eco47I	GGWCC	4 cut(s)	1074, 1344, 1370, 1770
Eco53kI	GAGCTC	2 cut(s)	265, 940
Eco57I	CTGAAG	6 cut(s)	320, 471, 492, 510, 1226, 1638
Eco81I	CCTNAGG	2 cut(s)	429, 839
Eco88I	CYCGRG	1 cut(s)	269
Eco91I	GGTNACC	1 cut(s)	1216
EcoICRI	GAGCTC	2 cut(s)	265, 940
EcoO109I	RGGNCCY	4 cut(s)	319, 433, 434, 742
EcoO65I	GGTNACC	1 cut(s)	1216
EcoRI	GAATTC	2 cut(s)	1022, 1463
EcoRII	CCWGG	4 cut(s)	312, 1212, 1224, 1708
EcoRV	GATATC	1 cut(s)	1174
EcoT14I	CCWWGG	5 cut(s)	153, 186, 591, 687, 1292
EcoT38I	GRGCYC	3 cut(s)	267, 437, 942
EgeI	GGCGCC	3 cut(s)	78, 345, 610
EheI	GGCGCC	3 cut(s)	78, 345, 610
ErhI	CCWWGG	5 cut(s)	153, 186, 591, 687, 1292
FaeI	CATG	2 cut(s)	880, 1296
FaiI	YATR	6 cut(s)	641, 878, 1294, 1406, 1434, 1637
FalI	AAGNNNNNCTT	2 cut(s)	854, 886
FaqI	GGGAC	1 cut(s)	638
FatI	CATG	2 cut(s)	876, 1292
FbaI	TGATCA	2 cut(s)	879, 1320
FblI	GTMKAC	2 cut(s)	777, 981
FokI	GGATG	4 cut(s)	296, 1330, 1360, 1595
FriOI	GRGCYC	3 cut(s)	267, 437, 942
FspBI	CTAG	2 cut(s)	846, 1650
GlaI	GCGC	5 cut(s)	78, 345, 610, 812, 902
GsuI	CTGGAG	3 cut(s)	311, 483, 1395
HaeII	RGCGCY	3 cut(s)	80, 347, 612
HaeIII	GGCC	6 cut(s)	143, 320, 435, 647, 743, 993
HgaI	GACGC	3 cut(s)	875, 929, 967
HhaI	GCGC	5 cut(s)	79, 346, 611, 813, 903
Hin1I	GRCGYC	7 cut(s)	77, 344, 609, 819, 867, 921, 978
Hin1II	CATG	2 cut(s)	880, 1296
Hin6I	GCGC	5 cut(s)	77, 344, 609, 811, 901
HinP1I	GCGC	5 cut(s)	77, 344, 609, 811, 901
HincII	GTYRAC	3 cut(s)	598, 982, 1168
HindII	GTYRAC	3 cut(s)	598, 982, 1168
HindIII	AAGCTT	1 cut(s)	504
HinfI	GANTC	6 cut(s)	68, 352, 703, 789, 1146, 1191
HphI	GGTGA	8 cut(s)	272, 553, 815, 871, 1031, 1210, 1459, 1717
Hpy166II	GTNNAC	6 cut(s)	339, 598, 778, 969, 982, 1168
Hpy188I	TCNGA	6 cut(s)	73, 451, 944, 1121, 1540, 1792
Hpy8I	GTNNAC	6 cut(s)	339, 598, 778, 969, 982, 1168
Hpy99I	CGWCG	3 cut(s)	821, 923, 983
HpyCH4III	ACNGT	8 cut(s)	48, 559, 586, 619, 892, 1074, 1498, 1522
HpyCH4IV	ACGT	5 cut(s)	252, 780, 819, 1011, 1417
HpyCH4V	TGCA	2 cut(s)	1512, 1642
HpyF3I	CTNAG	8 cut(s)	6, 192, 429, 570, 839, 1257, 1442, 1539
HpySE526I	ACGT	5 cut(s)	252, 780, 819, 1011, 1417
Hsp92I	GRCGYC	7 cut(s)	77, 344, 609, 819, 867, 921, 978
Hsp92II	CATG	2 cut(s)	880, 1296
HspAI	GCGC	5 cut(s)	77, 344, 609, 811, 901
KasI	GGCGCC	3 cut(s)	76, 343, 608
KpnI	GGTACC	1 cut(s)	1303
KroI	GCCGGC	1 cut(s)	382
KroNI	GCCGGC	1 cut(s)	384
Ksp22I	TGATCA	2 cut(s)	879, 1320
Kzo9I	GATC	7 cut(s)	205, 879, 915, 1095, 1320, 1680, 1698
LguI	GCTCTTC	2 cut(s)	1106, 1236
Lsp1109I	GCAGC	4 cut(s)	316, 406, 736, 825
LweI	GCATC	2 cut(s)	1125, 1612
MabI	ACCWGGT	1 cut(s)	1212
MaeI	CTAG	2 cut(s)	846, 1650
MaeII	ACGT	5 cut(s)	252, 780, 819, 1011, 1417
MaeIII	GTNAC	7 cut(s)	97, 565, 586, 803, 1216, 1483, 1492
MalI	GATC	7 cut(s)	207, 881, 917, 1097, 1322, 1682, 1700
MboI	GATC	7 cut(s)	205, 879, 915, 1095, 1320, 1680, 1698
MfeI	CAATTG	1 cut(s)	1235
MflI	RGATCY	1 cut(s)	1095
MhlI	GDGCHC	5 cut(s)	267, 437, 942, 1209, 1725
MluCI	AATT	5 cut(s)	795, 1022, 1124, 1235, 1463
Mly113I	GGCGCC	3 cut(s)	77, 344, 609
MlyI	GAGTC	4 cut(s)	77, 346, 697, 1185
MmeI	TCCRAC	1 cut(s)	51
MroNI	GCCGGC	1 cut(s)	382
MroXI	GAANNNNTTC	2 cut(s)	1052, 1691
MseI	TTAA	3 cut(s)	366, 1500, 1795
MspR9I	CCNGG	6 cut(s)	314, 746, 1188, 1214, 1226, 1710
MunI	CAATTG	1 cut(s)	1235
MvaI	CCWGG	4 cut(s)	314, 1214, 1226, 1710
NaeI	GCCGGC	1 cut(s)	384
NarI	GGCGCC	3 cut(s)	77, 344, 609
NciI	CCSGG	2 cut(s)	746, 1188
NcoI	CCATGG	1 cut(s)	1292
NdeII	GATC	7 cut(s)	205, 879, 915, 1095, 1320, 1680, 1698
NgoMIV	GCCGGC	1 cut(s)	382
NlaIII	CATG	2 cut(s)	880, 1296
NmeAIII	GCCGAG	4 cut(s)	112, 448, 1411, 1624
NmuCI	GTSAC	5 cut(s)	97, 565, 803, 1216, 1483
PciSI	GCTCTTC	2 cut(s)	1106, 1236
PcsI	WCGNNNNNNNCGW	2 cut(s)	347, 813
PdiI	GCCGGC	1 cut(s)	384
PdmI	GAANNNNTTC	2 cut(s)	1052, 1691
PfeI	GAWTC	2 cut(s)	789, 1146
PflFI	GACNNNGTC	1 cut(s)	1481
PflMI	CCANNNNNTGG	1 cut(s)	1105
PfoI	TCCNGGA	2 cut(s)	312, 1186
PleI	GAGTC	4 cut(s)	76, 346, 697, 1185
PluTI	GGCGCC	3 cut(s)	80, 347, 612
PpsI	GAGTC	4 cut(s)	76, 346, 697, 1185
Ppu21I	YACGTR	1 cut(s)	253
Psp124BI	GAGCTC	2 cut(s)	267, 942
Psp6I	CCWGG	4 cut(s)	312, 1212, 1224, 1708
PspEI	GGTNACC	1 cut(s)	1216
PspGI	CCWGG	4 cut(s)	312, 1212, 1224, 1708
PspOMI	GGGCCC	1 cut(s)	433
PspPI	GGNCC	8 cut(s)	319, 433, 434, 742, 1074, 1344, 1370, 1770
PstNI	CAGNNNCTG	1 cut(s)	1538
PsuI	RGATCY	1 cut(s)	1095
PsyI	GACNNNGTC	1 cut(s)	1481
RsaI	GTAC	2 cut(s)	1043, 1301
RsaNI	GTAC	2 cut(s)	1042, 1300
SacI	GAGCTC	2 cut(s)	267, 942
SalI	GTCGAC	1 cut(s)	980
SapI	GCTCTTC	2 cut(s)	1106, 1236
SaqAI	TTAA	3 cut(s)	366, 1500, 1795
Sau3AI	GATC	7 cut(s)	205, 879, 915, 1095, 1320, 1680, 1698
Sau96I	GGNCC	8 cut(s)	319, 433, 434, 742, 1074, 1344, 1370, 1770
SchI	GAGTC	4 cut(s)	77, 346, 697, 1185
ScrFI	CCNGG	6 cut(s)	314, 746, 1188, 1214, 1226, 1710
SduI	GDGCHC	5 cut(s)	267, 437, 942, 1209, 1725
SexAI	ACCWGGT	1 cut(s)	1212
SfaNI	GCATC	2 cut(s)	1125, 1612
SfcI	CTRYAG	1 cut(s)	1765
SfoI	GGCGCC	3 cut(s)	78, 345, 610
SgrAI	CRCCGGYG	1 cut(s)	709
SinI	GGWCC	4 cut(s)	1074, 1344, 1370, 1770
SmlI	CTYRAG	1 cut(s)	830
SmoI	CTYRAG	1 cut(s)	830
Sse9I	AATT	5 cut(s)	795, 1022, 1124, 1235, 1463
SspDI	GGCGCC	3 cut(s)	76, 343, 608
SspMI	CTAG	2 cut(s)	846, 1650
SstI	GAGCTC	2 cut(s)	267, 942
StyD4I	CCNGG	6 cut(s)	312, 744, 1186, 1212, 1224, 1708
StyI	CCWWGG	5 cut(s)	153, 186, 591, 687, 1292
TaaI	ACNGT	8 cut(s)	48, 559, 586, 619, 892, 1074, 1498, 1522
TaiI	ACGT	5 cut(s)	255, 783, 822, 1014, 1420
TaqI	TCGA	5 cut(s)	696, 918, 981, 1128, 1685
TaqII	GACCGA	2 cut(s)	116, 689
TasI	AATT	5 cut(s)	795, 1022, 1124, 1235, 1463
TauI	GCSGC	6 cut(s)	82, 277, 349, 650, 668, 671
TfiI	GAWTC	2 cut(s)	789, 1146
Tru1I	TTAA	3 cut(s)	366, 1500, 1795
Tru9I	TTAA	3 cut(s)	366, 1500, 1795
TscAI	CASTG	3 cut(s)	956, 1063, 1683
TseFI	GTSAC	5 cut(s)	97, 565, 803, 1216, 1483
TseI	GCWGC	4 cut(s)	304, 419, 749, 813
Tsp45I	GTSAC	5 cut(s)	97, 565, 803, 1216, 1483
TspDTI	ATGAA	3 cut(s)	222, 1072, 1077
TspGWI	ACGGA	1 cut(s)	1608
TspRI	CASTG	3 cut(s)	956, 1063, 1683
Tth111I	GACNNNGTC	1 cut(s)	1481
Van91I	CCANNNNNTGG	1 cut(s)	1105
VpaK11BI	GGWCC	4 cut(s)	1074, 1344, 1370, 1770
XapI	RAATTY	3 cut(s)	1022, 1124, 1463
XmiI	GTMKAC	2 cut(s)	777, 981
XmnI	GAANNNNTTC	2 cut(s)	1052, 1691
XspI	CTAG	2 cut(s)	846, 1650
ZraI	GACGTC	1 cut(s)	820

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.