Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0012627

Physical Location & Seq

Genomic Coordinates Reverse (-)

50865733 .. 50868490

Gene Structure 2758 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ20390

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1806 bp

ATGGCTGAGGAACACGAGAAGCCTGCTGCCTCTGCTGTGGAGGCACCGTGTGAGGTGGCGGTGGTGGAGTCGGAGGCGCCGCCTGCTGAGAAGTCTGTGACCGAGAAGGAAGCTGTGCCGGTGCCGGAGCCGGAGCCGGAGCCGGAGGCCAAGCCTGCCGTGGAGGTCGTTGAGGAGGCGGAGAAGCCTGCCAAGGCTGAGGAAGAGGTTGATCCTAAAATCGTCGCTCAGTCAGTTTCGTTCAAGGAAGAGAGCTACGTTGTTGGTGAGTTGCCCGAGCCGCAGAAGAAGGCTCTGGAGGAGCTGAAGCAGCTCATCCAGGAGGCCCTCAACAAGCACGAGTTCACCGCGCCGCCGACTCCGCCGCCGGTTAAGGAGGAGGAGAAGCCGGCTGTGGAGGAAGAGAAGAAAGAAGAAAAGAAGGAGGAGGAAAAAGCTGCCGAGCCTGAGGCCCCTGCCCCTGTTTGTGAAGCAGAGGCACCAAAAACTGAAGATGCTCCAGAAGCTTCCAAGTGCGAGGAAGTGAAACCAGAGGAAGAAGTGAAAGAAGAGAAGATCGTTGTTGTGACTGAGGTGGTTGAGACTGTTACCAAGGTTGACGATGACGGCGCCAAGACTGTGGAGGCGATTGAGGAGACCATAGTGGCCGCAGTCCCTACTCCGGCGGCGACCGAGGAACCAGCCAAAGAAGCTGAAGCGGCAGTCGAGGCGACTCCACCGACGGAGGAGCCGAAAAAAGAAGCGGAAGGGGCCCCGGCTGCTCCTCCGGTGGAGCCAGAGGAGGTCTACGTCTTTGGAATCCCGATTCTCGGTGACGAGCGCAGCGACGTCATTCTGCTCAAGTTTCTGAGGGCTAGGGATTTCAAGGTGAAGGACGCCTTCGCCATGATCAAGAACACCGTGAAGTGGCGCAAGGAGTTCGGGATCGACGCCCTGCTGGAGGAGGAGCTCGGAAGCCACTGGGAGAAGGTGGTGTTCACTCACGGCGTCGACAAGGAAGGCCACCCTGTGTGCTACAACGTGTTTGGTGAGTTCCAGAACAAGGAGCTGTACCAGAACACGTTCACTGATGAAGAGAAACGGTCCAAGTTCATCAAGTGGAGGATCCAGTTCCTGGAGAAGAGCATCAGAAAATTCGACTTCAACCCTACCGGAATCTCCACCATCGTTCAGGTCAACGATCTCAAAAACTCTCCCGGACTCTTCAAGAGGGAGCACAACCAGGTCACCAACCAGGCTCTTCAATTGCTTCAGGACAACTACCCTGAGTTCGTTGCCAAACAGGTGTTTATCAATGTGCCATGGTGGTACCTTGCTTTCAATAGGATGATCAGCCCCTTCCTGACCCAGAGGACCAAGAGCAAGTTTGTGTTTGCTGGTCCATCCAAATCCGCCGAGACCCTATTCAAATACATAGTTCCAGAACATGTGCCAGTTCAGTATGGTGGTCTAAGCAAGGAAGGCGAGTGTGAATTCACCACAGCCGACCCTGTCACAGAGGTTACTGTTAAACCAGCTTGCAAACACACCGTTGAAATCCCAGTTTCTGAGAGTGGTGTTCTTGTTTGGGAAGTGAGAGCATTGGCTTGGGATGTGAGTTACGGAGCTGAGTTTGTGCCAAGTGCTGAGGATGCTTACACAATCATATTGCAAAAGACTAGAAAGGTTGCCCCAAGCGATGAGCCAGTGATCTCGAACAGCTTCAAGATCGGCGAGCCAGGGAAGGTTGTGCTCACCATTGACAACCAAAGTTCCAAGAAGAAAAAGCTCCTCTACAGGTCCAAGACCAAGCCTTCCTCTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0002020 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005794 GO:0005886 GO:0005911 GO:0008150 GO:0009506 GO:0009507 GO:0009536 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0019899 GO:0022414 GO:0030054 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0048046 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051704 GO:0055044 GO:0060560 GO:0071840 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRAL_TRIO CRAL_TRIO_N

Protein Analysis

601

Amino Acids

66.95

Weight (kDa)

4.78

Isoelectric Point (pI)

52.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRAL_TRIO_N	PF03765	273 - 299	1e-08	CRAL/TRIO, N-terminal domain
CRAL_TRIO	PF00650	322 - 483	2.2e-29	CRAL/TRIO domain
GOLD_PATL1_C	PF25099	504 - 588	7.4e-37	Patellin-1-like, C-terminal GOLD domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012627)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g31750
malus_domestica	MD08G1218200.v1.1 MD15G1406000.v1.1
prunus_persica	Prupe.1G555200_v2.0.a1 Prupe.1G555200_v2.0.a1
pyrus_communis	pycom08g18910 pycom15g36280
rosa_chinensis	RchiOBHm_Chr7g0227641
rosa_laevigata	RLG00000001631
rosa_multiflora	Rmu_co8489989.1_g000001 Rmu_sc0041066.1_g000001
rosa_roxburghii	Rroxscaffold_3G00231990
rosa_rugosa	Rorug07G0242500 Rorug07G0242600
rosa_samantha	Rh7AG396100 Rh7BG377700 Rh7CG414800 Rh7DG391700
rosa_wichuraiana	Rw7G032930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	831
Acc65I	GGTACC	1 cut(s)	1308
AccB1I	GGYRCC	6 cut(s)	43, 76, 121, 478, 608, 1308
AccB7I	CCANNNNNTGG	1 cut(s)	1114
AccI	GTMKAC	2 cut(s)	786, 990
AccII	CGCG	1 cut(s)	350
AclWI	GGATC	4 cut(s)	206, 932, 1099, 1112
AcoI	YGGCCR	1 cut(s)	645
AcsI	RAATTY	2 cut(s)	1133, 1472
AcuI	CTGAAG	4 cut(s)	326, 510, 714, 1235
AcyI	GRCGYC	6 cut(s)	77, 609, 828, 876, 930, 987
AdeI	CACNNNGTG	2 cut(s)	50, 1009
AfaI	GTAC	2 cut(s)	1052, 1310
AfiI	CCNNNNNNNGG	6 cut(s)	661, 809, 906, 940, 1042, 1114
AflIII	ACRYGT	3 cut(s)	1020, 1059, 1426
AgsI	TTSAA	9 cut(s)	244, 865, 1144, 1207, 1244, 1321, 1408, 1535, 1705
AjnI	CCWGG	5 cut(s)	318, 1113, 1221, 1233, 1717
Alw21I	GWGCWC	3 cut(s)	951, 1218, 1734
Alw26I	GTCTC	3 cut(s)	575, 629, 1391
AlwI	GGATC	4 cut(s)	206, 932, 1099, 1112
AlwNI	CAGNNNCTG	2 cut(s)	1114, 1547
Ama87I	CYCGRG	1 cut(s)	275
AoxI	GGCC	6 cut(s)	147, 324, 450, 645, 750, 1000
ApaI	GGGCCC	1 cut(s)	754
ApeKI	GCWGC	5 cut(s)	26, 310, 437, 758, 822
ApoI	RAATTY	2 cut(s)	1133, 1472
Asp700I	GAANNNNTTC	2 cut(s)	1061, 1700
Asp718I	GGTACC	1 cut(s)	1308
AspLEI	GCGC	5 cut(s)	79, 352, 611, 822, 912
AspS9I	GGNCC	8 cut(s)	325, 451, 750, 751, 1083, 1353, 1379, 1779
AsuC2I	CCSGG	2 cut(s)	755, 1197
AsuHPI	GGTGA	8 cut(s)	278, 337, 824, 880, 1040, 1219, 1468, 1726
AvaI	CYCGRG	1 cut(s)	275
AvaII	GGWCC	4 cut(s)	1083, 1353, 1379, 1779
AxyI	CCTNAGG	1 cut(s)	447
BaeGI	GKGCMC	1 cut(s)	754
BamHI	GGATCC	1 cut(s)	1104
BanI	GGYRCC	6 cut(s)	43, 76, 121, 478, 608, 1308
BanII	GRGCYC	2 cut(s)	754, 951
BauI	CACGAG	2 cut(s)	14, 338
Bbv12I	GWGCWC	3 cut(s)	951, 1218, 1734
BbvCI	CCTCAGC	3 cut(s)	6, 198, 1626
BbvI	GCAGC	5 cut(s)	13, 322, 424, 745, 834
BccI	CCATC	2 cut(s)	1172, 1390
BceAI	ACGGC	3 cut(s)	143, 622, 1000
BcgI	CGANNNNNNTGC	4 cut(s)	5, 39, 901, 935
BciT130I	CCWGG	5 cut(s)	320, 1115, 1223, 1235, 1719
BclI	TGATCA	2 cut(s)	888, 1329
BcnI	CCSGG	2 cut(s)	755, 1197
BcoDI	GTCTC	3 cut(s)	575, 629, 1391
BfaI	CTAG	2 cut(s)	855, 1659
BfmI	CTRYAG	1 cut(s)	1774
BfoI	RGCGCY	2 cut(s)	80, 612
Bme1390I	CCNGG	7 cut(s)	320, 755, 1115, 1197, 1223, 1235, 1719
Bme18I	GGWCC	4 cut(s)	1083, 1353, 1379, 1779
BmeT110I	CYCGRG	1 cut(s)	275
BmgT120I	GGNCC	8 cut(s)	325, 451, 750, 751, 1083, 1353, 1379, 1779
BmrFI	CCNGG	7 cut(s)	320, 755, 1115, 1197, 1223, 1235, 1719
BmrI	ACTGGG	2 cut(s)	970, 1535
BmsI	GCATC	3 cut(s)	484, 1134, 1621
BmuI	ACTGGG	2 cut(s)	970, 1535
BpmI	CTGGAG	4 cut(s)	317, 483, 959, 1136
Bpu10I	CCTNAGC	3 cut(s)	6, 198, 1626
BpuEI	CTTGAG	1 cut(s)	824
BpuMI	CCSGG	2 cut(s)	755, 1197
BsaHI	GRCGYC	6 cut(s)	77, 609, 828, 876, 930, 987
BsaI	GGTCTC	2 cut(s)	629, 1391
BsaJI	CCNNGG	7 cut(s)	159, 192, 591, 672, 753, 1301, 1718
BsaWI	WCCGGW	2 cut(s)	766, 1151
BsaXI	ACNNNNNCTCC	2 cut(s)	32, 62
Bsc4I	CCNNNNNNNGG	6 cut(s)	661, 809, 906, 940, 1042, 1114
Bse118I	RCCGGY	3 cut(s)	118, 367, 388
Bse1I	ACTGG	5 cut(s)	965, 1108, 1433, 1541, 1685
Bse21I	CCTNAGG	1 cut(s)	447
BseBI	CCWGG	5 cut(s)	320, 1115, 1223, 1235, 1719
BseDI	CCNNGG	7 cut(s)	159, 192, 591, 672, 753, 1301, 1718
BseGI	GGATG	5 cut(s)	315, 1332, 1382, 1597, 1636
BseLI	CCNNNNNNNGG	6 cut(s)	661, 809, 906, 940, 1042, 1114
BseNI	ACTGG	5 cut(s)	965, 1108, 1433, 1541, 1685
BseSI	GKGCMC	1 cut(s)	754
BseXI	GCAGC	5 cut(s)	13, 322, 424, 745, 834
Bsh1236I	CGCG	1 cut(s)	350
Bsh1285I	CGRYCG	1 cut(s)	672
BshFI	GGCC	6 cut(s)	149, 326, 452, 647, 752, 1002
BshNI	GGYRCC	6 cut(s)	43, 76, 121, 478, 608, 1308
BsiEI	CGRYCG	1 cut(s)	672
BsiHKAI	GWGCWC	3 cut(s)	951, 1218, 1734
BsiHKCI	CYCGRG	1 cut(s)	275
BslFI	GGGAC	1 cut(s)	638
BslI	CCNNNNNNNGG	6 cut(s)	661, 809, 906, 940, 1042, 1114
BsmAI	GTCTC	3 cut(s)	575, 629, 1391
BsmFI	GGGAC	1 cut(s)	638
BsnI	GGCC	6 cut(s)	149, 326, 452, 647, 752, 1002
Bso31I	GGTCTC	2 cut(s)	629, 1391
BsoBI	CYCGRG	1 cut(s)	275
Bsp120I	GGGCCC	1 cut(s)	750
Bsp1286I	GDGCHC	4 cut(s)	754, 951, 1218, 1734
Bsp143I	GATC	9 cut(s)	211, 555, 888, 924, 1104, 1180, 1329, 1689, 1707
Bsp19I	CCATGG	1 cut(s)	1301
BspANI	GGCC	6 cut(s)	149, 326, 452, 647, 752, 1002
BspFNI	CGCG	1 cut(s)	350
BspPI	GGATC	4 cut(s)	206, 932, 1099, 1112
BspQI	GCTCTTC	2 cut(s)	1115, 1245
BspT107I	GGYRCC	6 cut(s)	43, 76, 121, 478, 608, 1308
BspTNI	GGTCTC	2 cut(s)	629, 1391
BsrFI	RCCGGY	3 cut(s)	118, 367, 388
BsrI	ACTGG	5 cut(s)	965, 1108, 1433, 1541, 1685
BssAI	RCCGGY	3 cut(s)	118, 367, 388
BssECI	CCNNGG	7 cut(s)	159, 192, 591, 672, 753, 1301, 1718
BssMI	GATC	9 cut(s)	211, 555, 888, 924, 1104, 1180, 1329, 1689, 1707
BssNI	GRCGYC	6 cut(s)	77, 609, 828, 876, 930, 987
BssSI	CACGAG	2 cut(s)	14, 338
BssT1I	CCWWGG	3 cut(s)	192, 591, 1301
Bst2BI	CACGAG	2 cut(s)	14, 338
Bst2UI	CCWGG	5 cut(s)	320, 1115, 1223, 1235, 1719
Bst4CI	ACNGT	7 cut(s)	48, 586, 619, 901, 1083, 1507, 1531
Bst6I	CTCTTC	8 cut(s)	198, 243, 396, 543, 1068, 1115, 1208, 1245
BstACI	GRCGYC	6 cut(s)	77, 609, 828, 876, 930, 987
BstC8I	GCNNGC	7 cut(s)	24, 84, 156, 189, 390, 1519, 1715
BstDSI	CCRYGG	2 cut(s)	159, 1301
BstEII	GGTNACC	1 cut(s)	1225
BstENI	CCTNNNNNAGG	1 cut(s)	938
BstF5I	GGATG	5 cut(s)	315, 1332, 1382, 1597, 1636
BstFNI	CGCG	1 cut(s)	350
BstH2I	RGCGCY	2 cut(s)	80, 612
BstHHI	GCGC	5 cut(s)	79, 352, 611, 822, 912
BstKTI	GATC	9 cut(s)	214, 558, 891, 927, 1107, 1183, 1332, 1692, 1710
BstMAI	GTCTC	3 cut(s)	575, 629, 1391
BstMBI	GATC	9 cut(s)	211, 555, 888, 924, 1104, 1180, 1329, 1689, 1707
BstMCI	CGRYCG	1 cut(s)	672
BstNI	CCWGG	5 cut(s)	320, 1115, 1223, 1235, 1719
BstNSI	RCATGY	1 cut(s)	1430
BstPI	GGTNACC	1 cut(s)	1225
BstSCI	CCNGG	7 cut(s)	318, 753, 1113, 1195, 1221, 1233, 1717
BstSFI	CTRYAG	1 cut(s)	1774
BstSLI	GKGCMC	1 cut(s)	754
BstUI	CGCG	1 cut(s)	350
BstV1I	GCAGC	5 cut(s)	13, 322, 424, 745, 834
BstX2I	RGATCY	1 cut(s)	1104
BstXI	CCANNNNNNTGG	1 cut(s)	619
BstYI	RGATCY	1 cut(s)	1104
Bsu36I	CCTNAGG	1 cut(s)	447
BsuRI	GGCC	6 cut(s)	149, 326, 452, 647, 752, 1002
BtgI	CCRYGG	2 cut(s)	159, 1301
BtgZI	GCGATG	1 cut(s)	1692
BtsCI	GGATG	5 cut(s)	315, 1332, 1382, 1597, 1636
BtsIMutI	CAGTG	3 cut(s)	958, 1065, 1692
Cac8I	GCNNGC	7 cut(s)	24, 84, 156, 189, 390, 1519, 1715
CaiI	CAGNNNCTG	2 cut(s)	1114, 1547
CfoI	GCGC	5 cut(s)	79, 352, 611, 822, 912
Cfr10I	RCCGGY	3 cut(s)	118, 367, 388
Cfr13I	GGNCC	8 cut(s)	325, 451, 750, 751, 1083, 1353, 1379, 1779
CseI	GACGC	3 cut(s)	884, 938, 976
CsiI	ACCWGGT	1 cut(s)	1221
Csp6I	GTAC	2 cut(s)	1051, 1309
CviAII	CATG	3 cut(s)	886, 1302, 1427
CviQI	GTAC	2 cut(s)	1051, 1309
DinI	GGCGCC	2 cut(s)	78, 610
DpnI	GATC	9 cut(s)	213, 557, 890, 926, 1106, 1182, 1331, 1691, 1709
DpnII	GATC	9 cut(s)	211, 555, 888, 924, 1104, 1180, 1329, 1689, 1707
DraIII	CACNNNGTG	2 cut(s)	50, 1009
EaeI	YGGCCR	1 cut(s)	645
Eam1104I	CTCTTC	8 cut(s)	198, 243, 396, 543, 1068, 1115, 1208, 1245
EarI	CTCTTC	8 cut(s)	198, 243, 396, 543, 1068, 1115, 1208, 1245
EciI	GGCGGA	3 cut(s)	194, 351, 1381
Ecl136II	GAGCTC	1 cut(s)	949
Eco130I	CCWWGG	3 cut(s)	192, 591, 1301
Eco24I	GRGCYC	2 cut(s)	754, 951
Eco31I	GGTCTC	2 cut(s)	629, 1391
Eco47I	GGWCC	4 cut(s)	1083, 1353, 1379, 1779
Eco53kI	GAGCTC	1 cut(s)	949
Eco57I	CTGAAG	4 cut(s)	326, 510, 714, 1235
Eco81I	CCTNAGG	1 cut(s)	447
Eco88I	CYCGRG	1 cut(s)	275
Eco91I	GGTNACC	1 cut(s)	1225
EcoICRI	GAGCTC	1 cut(s)	949
EcoNI	CCTNNNNNAGG	1 cut(s)	938
EcoO109I	RGGNCCY	4 cut(s)	325, 451, 750, 751
EcoO65I	GGTNACC	1 cut(s)	1225
EcoRI	GAATTC	1 cut(s)	1472
EcoRII	CCWGG	5 cut(s)	318, 1113, 1221, 1233, 1717
EcoT14I	CCWWGG	3 cut(s)	192, 591, 1301
EcoT38I	GRGCYC	2 cut(s)	754, 951
EgeI	GGCGCC	2 cut(s)	78, 610
EheI	GGCGCC	2 cut(s)	78, 610
ErhI	CCWWGG	3 cut(s)	192, 591, 1301
FaeI	CATG	3 cut(s)	889, 1305, 1430
FaiI	YATR	7 cut(s)	641, 887, 1303, 1415, 1428, 1443, 1646
FalI	AAGNNNNNCTT	2 cut(s)	863, 895
FaqI	GGGAC	1 cut(s)	638
FatI	CATG	3 cut(s)	885, 1301, 1426
FbaI	TGATCA	2 cut(s)	888, 1329
FblI	GTMKAC	2 cut(s)	786, 990
FokI	GGATG	5 cut(s)	302, 1339, 1369, 1604, 1643
FriOI	GRGCYC	2 cut(s)	754, 951
FspBI	CTAG	2 cut(s)	855, 1659
GlaI	GCGC	5 cut(s)	78, 351, 610, 821, 911
GsuI	CTGGAG	4 cut(s)	317, 483, 959, 1136
HaeII	RGCGCY	2 cut(s)	80, 612
HaeIII	GGCC	6 cut(s)	149, 326, 452, 647, 752, 1002
HgaI	GACGC	3 cut(s)	884, 938, 976
HhaI	GCGC	5 cut(s)	79, 352, 611, 822, 912
Hin1I	GRCGYC	6 cut(s)	77, 609, 828, 876, 930, 987
Hin1II	CATG	3 cut(s)	889, 1305, 1430
Hin6I	GCGC	5 cut(s)	77, 350, 609, 820, 910
HinP1I	GCGC	5 cut(s)	77, 350, 609, 820, 910
HincII	GTYRAC	3 cut(s)	598, 991, 1177
HindII	GTYRAC	3 cut(s)	598, 991, 1177
HindIII	AAGCTT	1 cut(s)	504
HinfI	GANTC	7 cut(s)	68, 358, 712, 798, 805, 1155, 1200
HphI	GGTGA	8 cut(s)	278, 337, 824, 880, 1040, 1219, 1468, 1726
Hpy166II	GTNNAC	7 cut(s)	345, 598, 787, 978, 991, 1065, 1177
Hpy188I	TCNGA	6 cut(s)	73, 849, 953, 1130, 1549, 1801
Hpy8I	GTNNAC	7 cut(s)	345, 598, 787, 978, 991, 1065, 1177
Hpy99I	CGWCG	5 cut(s)	227, 724, 830, 932, 992
HpyCH4III	ACNGT	7 cut(s)	48, 586, 619, 901, 1083, 1507, 1531
HpyCH4IV	ACGT	5 cut(s)	258, 789, 828, 1020, 1061
HpyCH4V	TGCA	2 cut(s)	1521, 1651
HpySE526I	ACGT	5 cut(s)	258, 789, 828, 1020, 1061
Hsp92I	GRCGYC	6 cut(s)	77, 609, 828, 876, 930, 987
Hsp92II	CATG	3 cut(s)	889, 1305, 1430
HspAI	GCGC	5 cut(s)	77, 350, 609, 820, 910
KasI	GGCGCC	2 cut(s)	76, 608
KpnI	GGTACC	1 cut(s)	1312
KroI	GCCGGC	1 cut(s)	388
KroNI	GCCGGC	1 cut(s)	390
Ksp22I	TGATCA	2 cut(s)	888, 1329
Kzo9I	GATC	9 cut(s)	211, 555, 888, 924, 1104, 1180, 1329, 1689, 1707
LguI	GCTCTTC	2 cut(s)	1115, 1245
Lsp1109I	GCAGC	5 cut(s)	13, 322, 424, 745, 834
LweI	GCATC	3 cut(s)	484, 1134, 1621
MabI	ACCWGGT	1 cut(s)	1221
MaeI	CTAG	2 cut(s)	855, 1659
MaeII	ACGT	5 cut(s)	258, 789, 828, 1020, 1061
MaeIII	GTNAC	8 cut(s)	97, 565, 586, 812, 1225, 1492, 1501, 1598
MalI	GATC	9 cut(s)	213, 557, 890, 926, 1106, 1182, 1331, 1691, 1709
MboI	GATC	9 cut(s)	211, 555, 888, 924, 1104, 1180, 1329, 1689, 1707
MfeI	CAATTG	1 cut(s)	1244
MflI	RGATCY	1 cut(s)	1104
MhlI	GDGCHC	4 cut(s)	754, 951, 1218, 1734
MluCI	AATT	3 cut(s)	1133, 1244, 1472
Mly113I	GGCGCC	2 cut(s)	77, 609
MlyI	GAGTC	4 cut(s)	77, 352, 706, 1194
MmeI	TCCRAC	1 cut(s)	51
MroNI	GCCGGC	1 cut(s)	388
MroXI	GAANNNNTTC	2 cut(s)	1061, 1700
MseI	TTAA	3 cut(s)	372, 1509, 1804
MspR9I	CCNGG	7 cut(s)	320, 755, 1115, 1197, 1223, 1235, 1719
MunI	CAATTG	1 cut(s)	1244
MvaI	CCWGG	5 cut(s)	320, 1115, 1223, 1235, 1719
MvnI	CGCG	1 cut(s)	350
NaeI	GCCGGC	1 cut(s)	390
NarI	GGCGCC	2 cut(s)	77, 609
NciI	CCSGG	2 cut(s)	755, 1197
NcoI	CCATGG	1 cut(s)	1301
NdeII	GATC	9 cut(s)	211, 555, 888, 924, 1104, 1180, 1329, 1689, 1707
NgoMIV	GCCGGC	1 cut(s)	388
NlaIII	CATG	3 cut(s)	889, 1305, 1430
NmeAIII	GCCGAG	2 cut(s)	466, 1420
NmuCI	GTSAC	5 cut(s)	97, 565, 812, 1225, 1492
NspI	RCATGY	1 cut(s)	1430
PciI	ACATGT	1 cut(s)	1426
PciSI	GCTCTTC	2 cut(s)	1115, 1245
PcsI	WCGNNNNNNNCGW	2 cut(s)	728, 822
PdiI	GCCGGC	1 cut(s)	390
PdmI	GAANNNNTTC	2 cut(s)	1061, 1700
PfeI	GAWTC	3 cut(s)	798, 805, 1155
PflFI	GACNNNGTC	1 cut(s)	1490
PflMI	CCANNNNNTGG	1 cut(s)	1114
PfoI	TCCNGGA	3 cut(s)	318, 1113, 1195
PleI	GAGTC	4 cut(s)	76, 352, 706, 1194
PluTI	GGCGCC	2 cut(s)	80, 612
PpsI	GAGTC	4 cut(s)	76, 352, 706, 1194
PscI	ACATGT	1 cut(s)	1426
Psp124BI	GAGCTC	1 cut(s)	951
Psp6I	CCWGG	5 cut(s)	318, 1113, 1221, 1233, 1717
PspEI	GGTNACC	1 cut(s)	1225
PspGI	CCWGG	5 cut(s)	318, 1113, 1221, 1233, 1717
PspOMI	GGGCCC	1 cut(s)	750
PspPI	GGNCC	8 cut(s)	325, 451, 750, 751, 1083, 1353, 1379, 1779
PstNI	CAGNNNCTG	2 cut(s)	1114, 1547
PsuI	RGATCY	1 cut(s)	1104
PsyI	GACNNNGTC	1 cut(s)	1490
RsaI	GTAC	2 cut(s)	1052, 1310
RsaNI	GTAC	2 cut(s)	1051, 1309
SacI	GAGCTC	1 cut(s)	951
SalI	GTCGAC	1 cut(s)	989
SapI	GCTCTTC	2 cut(s)	1115, 1245
SaqAI	TTAA	3 cut(s)	372, 1509, 1804
Sau3AI	GATC	9 cut(s)	211, 555, 888, 924, 1104, 1180, 1329, 1689, 1707
Sau96I	GGNCC	8 cut(s)	325, 451, 750, 751, 1083, 1353, 1379, 1779
SchI	GAGTC	4 cut(s)	77, 352, 706, 1194
ScrFI	CCNGG	7 cut(s)	320, 755, 1115, 1197, 1223, 1235, 1719
SduI	GDGCHC	4 cut(s)	754, 951, 1218, 1734
SexAI	ACCWGGT	1 cut(s)	1221
SfaNI	GCATC	3 cut(s)	484, 1134, 1621
SfcI	CTRYAG	1 cut(s)	1774
SfoI	GGCGCC	2 cut(s)	78, 610
SinI	GGWCC	4 cut(s)	1083, 1353, 1379, 1779
SmlI	CTYRAG	1 cut(s)	839
SmoI	CTYRAG	1 cut(s)	839
Sse9I	AATT	3 cut(s)	1133, 1244, 1472
SspDI	GGCGCC	2 cut(s)	76, 608
SspMI	CTAG	2 cut(s)	855, 1659
SstI	GAGCTC	1 cut(s)	951
StyD4I	CCNGG	7 cut(s)	318, 753, 1113, 1195, 1221, 1233, 1717
StyI	CCWWGG	3 cut(s)	192, 591, 1301
TaaI	ACNGT	7 cut(s)	48, 586, 619, 901, 1083, 1507, 1531
TaiI	ACGT	5 cut(s)	261, 792, 831, 1023, 1064
TaqI	TCGA	5 cut(s)	705, 927, 990, 1137, 1694
TaqII	GACCGA	2 cut(s)	116, 686
TasI	AATT	3 cut(s)	1133, 1244, 1472
TauI	GCSGC	7 cut(s)	82, 283, 355, 367, 650, 668, 701
TfiI	GAWTC	3 cut(s)	798, 805, 1155
Tru1I	TTAA	3 cut(s)	372, 1509, 1804
Tru9I	TTAA	3 cut(s)	372, 1509, 1804
TscAI	CASTG	3 cut(s)	965, 1072, 1692
TseFI	GTSAC	5 cut(s)	97, 565, 812, 1225, 1492
TseI	GCWGC	5 cut(s)	26, 310, 437, 758, 822
Tsp45I	GTSAC	5 cut(s)	97, 565, 812, 1225, 1492
TspDTI	ATGAA	2 cut(s)	1081, 1086
TspGWI	ACGGA	2 cut(s)	737, 1617
TspRI	CASTG	3 cut(s)	965, 1072, 1692
Tth111I	GACNNNGTC	1 cut(s)	1490
Van91I	CCANNNNNTGG	1 cut(s)	1114
VpaK11BI	GGWCC	4 cut(s)	1083, 1353, 1379, 1779
XagI	CCTNNNNNAGG	1 cut(s)	938
XapI	RAATTY	2 cut(s)	1133, 1472
XceI	RCATGY	1 cut(s)	1430
XcmI	CCANNNNNNNNNTGG	1 cut(s)	157
XmiI	GTMKAC	2 cut(s)	786, 990
XmnI	GAANNNNTTC	2 cut(s)	1061, 1700
XspI	CTAG	2 cut(s)	855, 1659
ZraI	GACGTC	1 cut(s)	829

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.