Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0012627

Physical Location & Seq

Genomic Coordinates Forward (+)

17553557 .. 17556357

Gene Structure 2801 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00231990.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1818 bp

ATGGCTGAGGAACACGAGAAGCCTGCTGCCTCTGCTGTGGAGGCACCGTGTGAGGTGGCGGTGGTGGAGTCGGAGGCGCCGCCTGCCGAGAAGTCTGTGACCGAGAAGGAAGCTGTGCCGGAGCCGGAGCCGGAGCCGGAGGCCAAGCCTGCCAAGGAGGTCGTTGAGGAGGCGGAGAAGCCTGCCAAGGCTGAGGAAGAGGTTGATCCTAAAATCGTCGCTCAATCGGTTTCGTTCAAGGAAGAGAGCTACGTGGTTGGTGAGCTCCCCGAGCCACAGAAGAAGGCTCTGGAGGAGCTGAAGCAGCTCATCCAGGAGGCCCTCAACAAGCACGAGTTCACCTCGCCGCCGACTCCGCCGCCGGTTAAGGAGGAGGAGAAGCCGGCTGTGGAGGAAGAGAAGAAAGAAGAAAAGAAGGAGGAAAAAGCTGCCGAGCCTGAGGCCCCTGCCCCTGTTTGTGAAGCAGAGGCACCAAAAACTGAAGAGGCGCCTAAAACTGAAGAAGCTCCAGAAGCTTCCAAGTGCGAGGAAGTGAAGCCAGAGGAAGAAGTGAAAGAAGAGAAGACCGTTGTTGTGACTGAGGTGATTGAGACTGTTACCAAGGTTGACGATGACGGCGCCAAGACTGTGGAGGCGATTGAGGAGACCATAGTGGCCGCAGTCCCTACTCTGGCGGCGGCGACCGAGGAACCAGCCAAAGAAGCTGAAGCGGCAATCGAGGCGACTCCACCGGCGGAGGAGCCGAAAAAAGAAGCGGAAGAAGCCCCGGCTGCTCCTCCGGTGGAGCCAGAGGAGGTCTACGTCTATGGAATCCCGATTCTCGGTGACGAGCGCAGCAACGTCATTCTGCTCAAGTTCCTGAGGGCTAGGGATTTCAAGGTGAAGGACGCCTTCGCCATGATCAAGAACACCGTGAAGTGGCGCAAGGAGTTCGGGATCGACGCCCTGCTGGAGGAGGAGCTGGGAAGCCACTGGGAGAAGGTGGTGTTCACTCACGGCGTCGACAAGGAAGGCCACCCTGTGTGCTACAACGTGTTTGGTGAGTTCCAGAACAAGGAGCTGTACCAGAACACGTTCACTGATGAAGAGAAACGGTCCAAGTTCATCAAGTGGAGGATCCAGTTCTTGGAGAAAAGCATCAGAAAATTCGACTTCAACCCTACCGGAATCTCCACCATCGTTCAGGTCAACGATATCAAAAACTCTCCCGGACTCTTCAAGAGGGAGCACAACCAGGTCACCAACCAGGCTCTTCAATTGCTTCAGGACAACTACCCTGAGTTCGTTGCCAAACAGGTGTTTATCAATGTGCCATGGTGGTACCTTGCTTTCAATAGGATGATCAGCCCCTTCCTGACCCAGAGGACCAAGAGCAAGTTTGTGTTTGCTGGTCCATCCAAATCCGCCGAGACCCTATTCAAATACATAGCTCCAGAACATGTGCCAGTTCAGTATGGTGGTCTAAGCAAGGAAGGTGAATGTGAATTCACCACAGCCGACCCTGTCACAGAGGTTACTGTTAAACCAGCTTGCAAACACACTGTTGAAATCCCAGTTTCTGAGAGTGGTGTTCTTGTTTGGGAAGTGAGAGTATTGGCTTGGGATGTGAGCTACGGAGCCGAGTTTGTGCCAAGTGCTGAGGATGCTTACACAATCATATTGCAAAAGACTAGAAAGGTTGCCCCAAGCGATGAGCCAGTGATCTCGAACAGCTTCAAGATCGGCGAGCCGGGGAAGGTTGTGCTCACCATTGACAACCAAAGTTCCAAGAAGAAAAAGCTCCTCTACAGGTCCAAGACCAAGCCTTCCTCTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0002020 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005794 GO:0005886 GO:0005911 GO:0008150 GO:0009506 GO:0009507 GO:0009536 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0019899 GO:0022414 GO:0030054 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0048046 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051704 GO:0055044 GO:0060560 GO:0071840 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRAL_TRIO CRAL_TRIO_N

Protein Analysis

605

Amino Acids

67.5

Weight (kDa)

4.81

Isoelectric Point (pI)

54.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRAL_TRIO_N	PF03765	277 - 303	8.1e-08	CRAL/TRIO, N-terminal domain
CRAL_TRIO	PF00650	326 - 487	1.9e-29	CRAL/TRIO domain
GOLD_PATL1_C	PF25099	508 - 592	8.7e-38	Patellin-1-like, C-terminal GOLD domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012627)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g31750
malus_domestica	MD08G1218200.v1.1 MD15G1406000.v1.1
prunus_persica	Prupe.1G555200_v2.0.a1 Prupe.1G555200_v2.0.a1
pyrus_communis	pycom08g18910 pycom15g36280
rosa_chinensis	RchiOBHm_Chr7g0227641
rosa_laevigata	RLG00000001631
rosa_multiflora	Rmu_co8489989.1_g000001 Rmu_sc0041066.1_g000001
rosa_roxburghii	Rroxscaffold_3G00231990
rosa_rugosa	Rorug07G0242500 Rorug07G0242600
rosa_samantha	Rh7AG396100 Rh7BG377700 Rh7CG414800 Rh7DG391700
rosa_wichuraiana	Rw7G032930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1320
AccB1I	GGYRCC	6 cut(s)	43, 76, 469, 487, 617, 1320
AccB7I	CCANNNNNTGG	1 cut(s)	1126
AccI	GTMKAC	2 cut(s)	798, 1002
AclWI	GGATC	4 cut(s)	200, 944, 1111, 1124
AcoI	YGGCCR	1 cut(s)	654
AcsI	RAATTY	2 cut(s)	1145, 1484
AcuI	CTGAAG	5 cut(s)	320, 501, 519, 726, 1247
AcyI	GRCGYC	6 cut(s)	77, 488, 618, 888, 942, 999
AdeI	CACNNNGTG	2 cut(s)	50, 1021
AfaI	GTAC	2 cut(s)	1064, 1322
AfiI	CCNNNNNNNGG	6 cut(s)	670, 821, 918, 952, 1054, 1126
AflIII	ACRYGT	3 cut(s)	1032, 1071, 1438
AgsI	TTSAA	9 cut(s)	238, 877, 1156, 1219, 1256, 1333, 1420, 1547, 1717
AjnI	CCWGG	3 cut(s)	312, 1233, 1245
Alw21I	GWGCWC	3 cut(s)	267, 1230, 1746
Alw26I	GTCTC	3 cut(s)	584, 638, 1403
AlwI	GGATC	4 cut(s)	200, 944, 1111, 1124
AlwNI	CAGNNNCTG	1 cut(s)	1559
Ama87I	CYCGRG	1 cut(s)	269
AoxI	GGCC	5 cut(s)	141, 318, 441, 654, 1012
ApeKI	GCWGC	5 cut(s)	26, 304, 428, 770, 834
ApoI	RAATTY	2 cut(s)	1145, 1484
Asp700I	GAANNNNTTC	2 cut(s)	1073, 1712
Asp718I	GGTACC	1 cut(s)	1320
AspLEI	GCGC	5 cut(s)	79, 490, 620, 834, 924
AspS9I	GGNCC	6 cut(s)	319, 442, 1095, 1365, 1391, 1791
AsuC2I	CCSGG	3 cut(s)	767, 1209, 1731
AvaI	CYCGRG	1 cut(s)	269
AvaII	GGWCC	4 cut(s)	1095, 1365, 1391, 1791
AxyI	CCTNAGG	2 cut(s)	438, 860
BamHI	GGATCC	1 cut(s)	1116
BanI	GGYRCC	6 cut(s)	43, 76, 469, 487, 617, 1320
BanII	GRGCYC	1 cut(s)	267
BauI	CACGAG	2 cut(s)	14, 332
BbsI	GAAGAC	1 cut(s)	569
Bbv12I	GWGCWC	3 cut(s)	267, 1230, 1746
BbvCI	CCTCAGC	3 cut(s)	6, 192, 1638
BbvI	GCAGC	5 cut(s)	13, 316, 415, 757, 846
BccI	CCATC	2 cut(s)	1184, 1402
BceAI	ACGGC	2 cut(s)	631, 1012
BcgI	CGANNNNNNTGC	4 cut(s)	5, 39, 913, 947
BciT130I	CCWGG	3 cut(s)	314, 1235, 1247
BclI	TGATCA	2 cut(s)	900, 1341
BcnI	CCSGG	3 cut(s)	767, 1209, 1731
BcoDI	GTCTC	3 cut(s)	584, 638, 1403
BfaI	CTAG	2 cut(s)	867, 1671
BfmI	CTRYAG	1 cut(s)	1786
BfoI	RGCGCY	3 cut(s)	80, 491, 621
Bme1390I	CCNGG	6 cut(s)	314, 767, 1209, 1235, 1247, 1731
Bme18I	GGWCC	4 cut(s)	1095, 1365, 1391, 1791
BmeT110I	CYCGRG	1 cut(s)	269
BmgT120I	GGNCC	6 cut(s)	319, 442, 1095, 1365, 1391, 1791
BmrFI	CCNGG	6 cut(s)	314, 767, 1209, 1235, 1247, 1731
BmrI	ACTGGG	2 cut(s)	982, 1547
BmsI	GCATC	2 cut(s)	1146, 1633
BmuI	ACTGGG	2 cut(s)	982, 1547
BpiI	GAAGAC	1 cut(s)	569
BplI	GAGNNNNNCTC	2 cut(s)	326, 358
BpmI	CTGGAG	4 cut(s)	311, 492, 971, 1416
Bpu10I	CCTNAGC	3 cut(s)	6, 192, 1638
BpuEI	CTTGAG	1 cut(s)	836
BpuMI	CCSGG	3 cut(s)	767, 1209, 1731
BsaAI	YACGTR	1 cut(s)	253
BsaHI	GRCGYC	6 cut(s)	77, 488, 618, 888, 942, 999
BsaI	GGTCTC	2 cut(s)	638, 1403
BsaJI	CCNNGG	7 cut(s)	153, 186, 600, 684, 765, 1313, 1730
BsaWI	WCCGGW	2 cut(s)	778, 1163
BsaXI	ACNNNNNCTCC	2 cut(s)	32, 62
Bsc4I	CCNNNNNNNGG	6 cut(s)	670, 821, 918, 952, 1054, 1126
Bse118I	RCCGGY	3 cut(s)	361, 382, 730
Bse1I	ACTGG	5 cut(s)	977, 1120, 1445, 1553, 1697
Bse21I	CCTNAGG	2 cut(s)	438, 860
BseBI	CCWGG	3 cut(s)	314, 1235, 1247
BseDI	CCNNGG	7 cut(s)	153, 186, 600, 684, 765, 1313, 1730
BseGI	GGATG	5 cut(s)	309, 1344, 1394, 1609, 1648
BseLI	CCNNNNNNNGG	6 cut(s)	670, 821, 918, 952, 1054, 1126
BseMII	CTCAG	7 cut(s)	183, 429, 570, 851, 1269, 1551, 1629
BseNI	ACTGG	5 cut(s)	977, 1120, 1445, 1553, 1697
BseXI	GCAGC	5 cut(s)	13, 316, 415, 757, 846
BseYI	CCCAGC	1 cut(s)	961
Bsh1285I	CGRYCG	1 cut(s)	684
BshFI	GGCC	5 cut(s)	143, 320, 443, 656, 1014
BshNI	GGYRCC	6 cut(s)	43, 76, 469, 487, 617, 1320
BsiEI	CGRYCG	1 cut(s)	684
BsiHKAI	GWGCWC	3 cut(s)	267, 1230, 1746
BsiHKCI	CYCGRG	1 cut(s)	269
BslFI	GGGAC	1 cut(s)	647
BslI	CCNNNNNNNGG	6 cut(s)	670, 821, 918, 952, 1054, 1126
BsmAI	GTCTC	3 cut(s)	584, 638, 1403
BsmFI	GGGAC	1 cut(s)	647
BsnI	GGCC	5 cut(s)	143, 320, 443, 656, 1014
Bso31I	GGTCTC	2 cut(s)	638, 1403
BsoBI	CYCGRG	1 cut(s)	269
Bsp1286I	GDGCHC	3 cut(s)	267, 1230, 1746
Bsp143I	GATC	7 cut(s)	205, 900, 936, 1116, 1341, 1701, 1719
Bsp19I	CCATGG	1 cut(s)	1313
BspANI	GGCC	5 cut(s)	143, 320, 443, 656, 1014
BspCNI	CTCAG	7 cut(s)	184, 430, 571, 852, 1270, 1552, 1630
BspPI	GGATC	4 cut(s)	200, 944, 1111, 1124
BspQI	GCTCTTC	1 cut(s)	1257
BspT107I	GGYRCC	6 cut(s)	43, 76, 469, 487, 617, 1320
BspTNI	GGTCTC	2 cut(s)	638, 1403
BsrFI	RCCGGY	3 cut(s)	361, 382, 730
BsrI	ACTGG	5 cut(s)	977, 1120, 1445, 1553, 1697
BssAI	RCCGGY	3 cut(s)	361, 382, 730
BssECI	CCNNGG	7 cut(s)	153, 186, 600, 684, 765, 1313, 1730
BssMI	GATC	7 cut(s)	205, 900, 936, 1116, 1341, 1701, 1719
BssNI	GRCGYC	6 cut(s)	77, 488, 618, 888, 942, 999
BssSI	CACGAG	2 cut(s)	14, 332
BssT1I	CCWWGG	4 cut(s)	153, 186, 600, 1313
Bst2BI	CACGAG	2 cut(s)	14, 332
Bst2UI	CCWGG	3 cut(s)	314, 1235, 1247
Bst4CI	ACNGT	8 cut(s)	48, 568, 595, 628, 913, 1095, 1519, 1543
Bst6I	CTCTTC	8 cut(s)	192, 237, 390, 477, 552, 1080, 1220, 1257
BstACI	GRCGYC	6 cut(s)	77, 488, 618, 888, 942, 999
BstBAI	YACGTR	1 cut(s)	253
BstC8I	GCNNGC	7 cut(s)	24, 84, 150, 183, 384, 1531, 1727
BstDEI	CTNAG	9 cut(s)	6, 192, 438, 579, 860, 1278, 1463, 1560, 1638
BstDSI	CCRYGG	1 cut(s)	1313
BstEII	GGTNACC	1 cut(s)	1237
BstENI	CCTNNNNNAGG	1 cut(s)	950
BstF5I	GGATG	5 cut(s)	309, 1344, 1394, 1609, 1648
BstH2I	RGCGCY	3 cut(s)	80, 491, 621
BstHHI	GCGC	5 cut(s)	79, 490, 620, 834, 924
BstKTI	GATC	7 cut(s)	208, 903, 939, 1119, 1344, 1704, 1722
BstMAI	GTCTC	3 cut(s)	584, 638, 1403
BstMBI	GATC	7 cut(s)	205, 900, 936, 1116, 1341, 1701, 1719
BstMCI	CGRYCG	1 cut(s)	684
BstNI	CCWGG	3 cut(s)	314, 1235, 1247
BstNSI	RCATGY	1 cut(s)	1442
BstPI	GGTNACC	1 cut(s)	1237
BstSCI	CCNGG	6 cut(s)	312, 765, 1207, 1233, 1245, 1729
BstSFI	CTRYAG	1 cut(s)	1786
BstV1I	GCAGC	5 cut(s)	13, 316, 415, 757, 846
BstV2I	GAAGAC	1 cut(s)	569
BstX2I	RGATCY	1 cut(s)	1116
BstXI	CCANNNNNNTGG	1 cut(s)	628
BstYI	RGATCY	1 cut(s)	1116
Bsu36I	CCTNAGG	2 cut(s)	438, 860
BsuRI	GGCC	5 cut(s)	143, 320, 443, 656, 1014
BtgI	CCRYGG	1 cut(s)	1313
BtgZI	GCGATG	1 cut(s)	1704
BtsCI	GGATG	5 cut(s)	309, 1344, 1394, 1609, 1648
BtsIMutI	CAGTG	4 cut(s)	970, 1077, 1539, 1704
Cac8I	GCNNGC	7 cut(s)	24, 84, 150, 183, 384, 1531, 1727
CaiI	CAGNNNCTG	1 cut(s)	1559
CfoI	GCGC	5 cut(s)	79, 490, 620, 834, 924
Cfr10I	RCCGGY	3 cut(s)	361, 382, 730
Cfr13I	GGNCC	6 cut(s)	319, 442, 1095, 1365, 1391, 1791
CseI	GACGC	3 cut(s)	896, 950, 988
CsiI	ACCWGGT	1 cut(s)	1233
Csp6I	GTAC	2 cut(s)	1063, 1321
CviAII	CATG	3 cut(s)	898, 1314, 1439
CviQI	GTAC	2 cut(s)	1063, 1321
DdeI	CTNAG	9 cut(s)	6, 192, 438, 579, 860, 1278, 1463, 1560, 1638
DinI	GGCGCC	3 cut(s)	78, 489, 619
DpnI	GATC	7 cut(s)	207, 902, 938, 1118, 1343, 1703, 1721
DpnII	GATC	7 cut(s)	205, 900, 936, 1116, 1341, 1701, 1719
DraIII	CACNNNGTG	2 cut(s)	50, 1021
EaeI	YGGCCR	1 cut(s)	654
Eam1104I	CTCTTC	8 cut(s)	192, 237, 390, 477, 552, 1080, 1220, 1257
EarI	CTCTTC	8 cut(s)	192, 237, 390, 477, 552, 1080, 1220, 1257
EciI	GGCGGA	4 cut(s)	188, 345, 749, 1393
Ecl136II	GAGCTC	1 cut(s)	265
Eco130I	CCWWGG	4 cut(s)	153, 186, 600, 1313
Eco24I	GRGCYC	1 cut(s)	267
Eco31I	GGTCTC	2 cut(s)	638, 1403
Eco32I	GATATC	1 cut(s)	1195
Eco47I	GGWCC	4 cut(s)	1095, 1365, 1391, 1791
Eco53kI	GAGCTC	1 cut(s)	265
Eco57I	CTGAAG	5 cut(s)	320, 501, 519, 726, 1247
Eco81I	CCTNAGG	2 cut(s)	438, 860
Eco88I	CYCGRG	1 cut(s)	269
Eco91I	GGTNACC	1 cut(s)	1237
EcoICRI	GAGCTC	1 cut(s)	265
EcoNI	CCTNNNNNAGG	1 cut(s)	950
EcoO109I	RGGNCCY	2 cut(s)	319, 442
EcoO65I	GGTNACC	1 cut(s)	1237
EcoRI	GAATTC	1 cut(s)	1484
EcoRII	CCWGG	3 cut(s)	312, 1233, 1245
EcoRV	GATATC	1 cut(s)	1195
EcoT14I	CCWWGG	4 cut(s)	153, 186, 600, 1313
EcoT38I	GRGCYC	1 cut(s)	267
EgeI	GGCGCC	3 cut(s)	78, 489, 619
EheI	GGCGCC	3 cut(s)	78, 489, 619
ErhI	CCWWGG	4 cut(s)	153, 186, 600, 1313
FaeI	CATG	3 cut(s)	901, 1317, 1442
FaiI	YATR	8 cut(s)	650, 807, 899, 1315, 1427, 1440, 1455, 1658
FalI	AAGNNNNNCTT	2 cut(s)	875, 907
FaqI	GGGAC	1 cut(s)	647
FatI	CATG	3 cut(s)	897, 1313, 1438
FbaI	TGATCA	2 cut(s)	900, 1341
FblI	GTMKAC	2 cut(s)	798, 1002
FokI	GGATG	5 cut(s)	296, 1351, 1381, 1616, 1655
FriOI	GRGCYC	1 cut(s)	267
FspBI	CTAG	2 cut(s)	867, 1671
GlaI	GCGC	5 cut(s)	78, 489, 619, 833, 923
GsaI	CCCAGC	1 cut(s)	965
GsuI	CTGGAG	4 cut(s)	311, 492, 971, 1416
HaeII	RGCGCY	3 cut(s)	80, 491, 621
HaeIII	GGCC	5 cut(s)	143, 320, 443, 656, 1014
HgaI	GACGC	3 cut(s)	896, 950, 988
HhaI	GCGC	5 cut(s)	79, 490, 620, 834, 924
Hin1I	GRCGYC	6 cut(s)	77, 488, 618, 888, 942, 999
Hin1II	CATG	3 cut(s)	901, 1317, 1442
Hin6I	GCGC	5 cut(s)	77, 488, 618, 832, 922
HinP1I	GCGC	5 cut(s)	77, 488, 618, 832, 922
HincII	GTYRAC	3 cut(s)	607, 1003, 1189
HindII	GTYRAC	3 cut(s)	607, 1003, 1189
HindIII	AAGCTT	1 cut(s)	513
HinfI	GANTC	7 cut(s)	68, 352, 724, 810, 817, 1167, 1212
Hpy166II	GTNNAC	7 cut(s)	339, 607, 799, 990, 1003, 1077, 1189
Hpy188I	TCNGA	4 cut(s)	73, 1142, 1561, 1813
Hpy8I	GTNNAC	7 cut(s)	339, 607, 799, 990, 1003, 1077, 1189
Hpy99I	CGWCG	3 cut(s)	221, 944, 1004
HpyCH4III	ACNGT	8 cut(s)	48, 568, 595, 628, 913, 1095, 1519, 1543
HpyCH4IV	ACGT	5 cut(s)	252, 801, 840, 1032, 1073
HpyCH4V	TGCA	2 cut(s)	1533, 1663
HpyF3I	CTNAG	9 cut(s)	6, 192, 438, 579, 860, 1278, 1463, 1560, 1638
HpySE526I	ACGT	5 cut(s)	252, 801, 840, 1032, 1073
Hsp92I	GRCGYC	6 cut(s)	77, 488, 618, 888, 942, 999
Hsp92II	CATG	3 cut(s)	901, 1317, 1442
HspAI	GCGC	5 cut(s)	77, 488, 618, 832, 922
KasI	GGCGCC	3 cut(s)	76, 487, 617
KpnI	GGTACC	1 cut(s)	1324
KroI	GCCGGC	1 cut(s)	382
KroNI	GCCGGC	1 cut(s)	384
Ksp22I	TGATCA	2 cut(s)	900, 1341
Kzo9I	GATC	7 cut(s)	205, 900, 936, 1116, 1341, 1701, 1719
LguI	GCTCTTC	1 cut(s)	1257
Lsp1109I	GCAGC	5 cut(s)	13, 316, 415, 757, 846
LweI	GCATC	2 cut(s)	1146, 1633
MabI	ACCWGGT	1 cut(s)	1233
MaeI	CTAG	2 cut(s)	867, 1671
MaeII	ACGT	5 cut(s)	252, 801, 840, 1032, 1073
MaeIII	GTNAC	7 cut(s)	97, 574, 595, 824, 1237, 1504, 1513
MalI	GATC	7 cut(s)	207, 902, 938, 1118, 1343, 1703, 1721
MboI	GATC	7 cut(s)	205, 900, 936, 1116, 1341, 1701, 1719
MfeI	CAATTG	1 cut(s)	1256
MflI	RGATCY	1 cut(s)	1116
MhlI	GDGCHC	3 cut(s)	267, 1230, 1746
MluCI	AATT	3 cut(s)	1145, 1256, 1484
Mly113I	GGCGCC	3 cut(s)	77, 488, 618
MlyI	GAGTC	4 cut(s)	77, 346, 718, 1206
MmeI	TCCRAC	1 cut(s)	51
MroNI	GCCGGC	1 cut(s)	382
MroXI	GAANNNNTTC	2 cut(s)	1073, 1712
MseI	TTAA	3 cut(s)	366, 1521, 1816
MspR9I	CCNGG	6 cut(s)	314, 767, 1209, 1235, 1247, 1731
MunI	CAATTG	1 cut(s)	1256
MvaI	CCWGG	3 cut(s)	314, 1235, 1247
NaeI	GCCGGC	1 cut(s)	384
NarI	GGCGCC	3 cut(s)	77, 488, 618
NciI	CCSGG	3 cut(s)	767, 1209, 1731
NcoI	CCATGG	1 cut(s)	1313
NdeII	GATC	7 cut(s)	205, 900, 936, 1116, 1341, 1701, 1719
NgoMIV	GCCGGC	1 cut(s)	382
NlaIII	CATG	3 cut(s)	901, 1317, 1442
NmeAIII	GCCGAG	4 cut(s)	112, 457, 1432, 1645
NmuCI	GTSAC	5 cut(s)	97, 574, 824, 1237, 1504
NspI	RCATGY	1 cut(s)	1442
PciI	ACATGT	1 cut(s)	1438
PciSI	GCTCTTC	1 cut(s)	1257
PdiI	GCCGGC	1 cut(s)	384
PdmI	GAANNNNTTC	2 cut(s)	1073, 1712
PfeI	GAWTC	3 cut(s)	810, 817, 1167
PflFI	GACNNNGTC	1 cut(s)	1502
PflMI	CCANNNNNTGG	1 cut(s)	1126
PfoI	TCCNGGA	2 cut(s)	312, 1207
PleI	GAGTC	4 cut(s)	76, 346, 718, 1206
PluTI	GGCGCC	3 cut(s)	80, 491, 621
PpsI	GAGTC	4 cut(s)	76, 346, 718, 1206
Ppu21I	YACGTR	1 cut(s)	253
PscI	ACATGT	1 cut(s)	1438
Psp124BI	GAGCTC	1 cut(s)	267
Psp6I	CCWGG	3 cut(s)	312, 1233, 1245
PspEI	GGTNACC	1 cut(s)	1237
PspFI	CCCAGC	1 cut(s)	961
PspGI	CCWGG	3 cut(s)	312, 1233, 1245
PspPI	GGNCC	6 cut(s)	319, 442, 1095, 1365, 1391, 1791
PstNI	CAGNNNCTG	1 cut(s)	1559
PsuI	RGATCY	1 cut(s)	1116
PsyI	GACNNNGTC	1 cut(s)	1502
RsaI	GTAC	2 cut(s)	1064, 1322
RsaNI	GTAC	2 cut(s)	1063, 1321
SacI	GAGCTC	1 cut(s)	267
SalI	GTCGAC	1 cut(s)	1001
SapI	GCTCTTC	1 cut(s)	1257
SaqAI	TTAA	3 cut(s)	366, 1521, 1816
Sau3AI	GATC	7 cut(s)	205, 900, 936, 1116, 1341, 1701, 1719
Sau96I	GGNCC	6 cut(s)	319, 442, 1095, 1365, 1391, 1791
SchI	GAGTC	4 cut(s)	77, 346, 718, 1206
ScrFI	CCNGG	6 cut(s)	314, 767, 1209, 1235, 1247, 1731
SduI	GDGCHC	3 cut(s)	267, 1230, 1746
SexAI	ACCWGGT	1 cut(s)	1233
SfaNI	GCATC	2 cut(s)	1146, 1633
SfcI	CTRYAG	1 cut(s)	1786
SfoI	GGCGCC	3 cut(s)	78, 489, 619
SgrAI	CRCCGGYG	1 cut(s)	730
SinI	GGWCC	4 cut(s)	1095, 1365, 1391, 1791
SmlI	CTYRAG	1 cut(s)	851
SmoI	CTYRAG	1 cut(s)	851
Sse9I	AATT	3 cut(s)	1145, 1256, 1484
SspDI	GGCGCC	3 cut(s)	76, 487, 617
SspMI	CTAG	2 cut(s)	867, 1671
SstI	GAGCTC	1 cut(s)	267
StyD4I	CCNGG	6 cut(s)	312, 765, 1207, 1233, 1245, 1729
StyI	CCWWGG	4 cut(s)	153, 186, 600, 1313
TaaI	ACNGT	8 cut(s)	48, 568, 595, 628, 913, 1095, 1519, 1543
TaiI	ACGT	5 cut(s)	255, 804, 843, 1035, 1076
TaqI	TCGA	5 cut(s)	717, 939, 1002, 1149, 1706
TaqII	GACCGA	2 cut(s)	116, 698
TasI	AATT	3 cut(s)	1145, 1256, 1484
TauI	GCSGC	7 cut(s)	82, 349, 361, 659, 677, 680, 713
TfiI	GAWTC	3 cut(s)	810, 817, 1167
Tru1I	TTAA	3 cut(s)	366, 1521, 1816
Tru9I	TTAA	3 cut(s)	366, 1521, 1816
TscAI	CASTG	4 cut(s)	977, 1084, 1546, 1704
TseFI	GTSAC	5 cut(s)	97, 574, 824, 1237, 1504
TseI	GCWGC	5 cut(s)	26, 304, 428, 770, 834
Tsp45I	GTSAC	5 cut(s)	97, 574, 824, 1237, 1504
TspDTI	ATGAA	2 cut(s)	1093, 1098
TspGWI	ACGGA	1 cut(s)	1629
TspRI	CASTG	4 cut(s)	977, 1084, 1546, 1704
Tth111I	GACNNNGTC	1 cut(s)	1502
Van91I	CCANNNNNTGG	1 cut(s)	1126
VpaK11BI	GGWCC	4 cut(s)	1095, 1365, 1391, 1791
XagI	CCTNNNNNAGG	1 cut(s)	950
XapI	RAATTY	2 cut(s)	1145, 1484
XceI	RCATGY	1 cut(s)	1442
XmiI	GTMKAC	2 cut(s)	798, 1002
XmnI	GAANNNNTTC	2 cut(s)	1073, 1712
XspI	CTAG	2 cut(s)	867, 1671

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.