Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0012627

Physical Location & Seq

Genomic Coordinates Reverse (-)

53274802 .. 53277029

Gene Structure 2228 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG414800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1803 bp

ATGGCTGAGGAACACGAGAAGCCTGCTGCCTCTGCTGTGGAGGCACCGTGTGAGGTGGCGGTGGTGGAGTCGGAGGCGCCGCCTGCCGAGAAGTCTGTGACCGAGAAGGAAGCTGTGCCGGTGCCGGAGCCGGAGCCGGAGGCCAAGCCTGCCGTGGAGGTCGTTGAGGAGGCGGAGAAGCCAGCCAAGGCTGAGGAAGAGGTTGATCCTAAAATCGTCGCTCAGTCAGTTTCGTTCAAGGAAGAGAGCTACGTTGTTGGTGAGTTGCCCGAGCCGCAGAAGAAGGCTCTGGAGGAGCTGAAGCAGCTCATCCAGGAGGCCCTCAACAAGCACGAGTTCACCGCGCCGCCGACTCCGCTGCCGGTTAAGGAGGAGGAGAAGCCGGCTGTGGAGGAAGAGAAGAAAGAAGAAAAGAAGGAGGAGGAAAAAGCTGCCGAGCCTGAGGCCCCTGCCCCTGTTTGTGAAGCAGAGGCACCAAAAACTGAAGATGCTCCAGAAGCTTCCAAGTGCGAGGAAGTGAAACCAGAGGAAGAAGTGAAAGAAGAGAAGATCGTTGTTGTGACTGAGGTGGTTGAGACTGTTACCAAGGTTGACGATGACGGCGCCAAGACTGTGGAGGCGATTGAGGAGACCATAGTGGCCGCAGTCCCTACTCCGGCGGCGGCGACCGAGGAACCAGCCAAAGAAGCTGAAGCGGCAGTCGAGGCGACTCAACCGGCGGAGGAGCCGAAAAAAGAAGCGGAAGGGGCCCCGGCTGCTCCTCCGGTGGAGCCAGAGGAGGTCTACGTCTTTGGAATCCCGATTCTCGGTGACGAGCGCAGCGACGTCATTCTGCTCAAGTTTCTGAGGGCTAGGGATTTCAAGGTGAAGGACGCCTTCGCCATGATCAAGAACACCGTGAAGTGGCGCAAGGAGTTCGGGATCGACGCCCTGCTGGAGGAGGAGCTCGGAAGCCACTGGGAGAAGGTGGTGTTCACTCACGGCGTCGACAAGGAAGGCCACCCTGTGTGCTACAACGTGTTTGGTGAGTTCCAGAACAAGGAGCTGTACCAGAACACGTTCACTGATGAAGAGAAACGGTCCAAGTTCATCAAGTGGAGGATCCAGTTCCTGGAGAAGAGCATCAGAAAATTCGACTTCAACCCTACCGGAATCTCCACCATCGTTCAGGTCAACGATCTCAAAAACTCTCCCGGACTCTTCAAGAGGGAGCACAACCAGGTTACCAACCAGGCTCTTCAATTGCTTCAGGACAACTACCCTGAGTTCGTTGCCAAACAGGTGTTTATCAATGTGCCATGGTGGTACCTTGCTTTCAATAGGATGATCAGCCCCTTCCTGACCCAGAGGACCAAGAGCAAGTTCGTGTTTGCTGGTCCATCCAAATCCGCCGAGACCCTATTCAAATACATAGTTCCAGAACATGTGCCAGTTCAGTATGGTGGTCTAAGCAAGGAAGGCGAGTGTGAATTCACCACAGCCGACCCTGTCACAGAGGTTACTGTTAAACCAGCTTGCAAACACACCGTTGAAATCCCAGTTTCTGAGAGTGGTGTTCTTGTTTGGGAAGTGAGAGTATTGGCTTGGGATGTGAGCTACGGAGCCGAGTTTGTGCCAAGTGCTGAGGATGCTTACACAATCATATTGCAAAAGACTAGAAAGGTTGCCCCAAGCGATGAGCCAGTGATCTCGAACAGCTTCAAGATCGGCGAGCCAGGGAAGGTTGTGCTCACCATTGACAACCAAAGTTCCAAGAAGAAAAAGCTCCTCTACAGGTCCAAGACCAAGCCTTCCTCTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0002020 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005794 GO:0005886 GO:0005911 GO:0008150 GO:0009506 GO:0009507 GO:0009536 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0019899 GO:0022414 GO:0030054 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0048046 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051704 GO:0055044 GO:0060560 GO:0071840 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRAL_TRIO CRAL_TRIO_N

Protein Analysis

600

Amino Acids

66.84

Weight (kDa)

4.79

Isoelectric Point (pI)

51.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRAL_TRIO_N	PF03765	272 - 298	1e-08	CRAL/TRIO, N-terminal domain
CRAL_TRIO	PF00650	321 - 482	2.2e-29	CRAL/TRIO domain
GOLD_PATL1_C	PF25099	503 - 587	8.6e-38	Patellin-1-like, C-terminal GOLD domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012627)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g31750
malus_domestica	MD08G1218200.v1.1 MD15G1406000.v1.1
prunus_persica	Prupe.1G555200_v2.0.a1 Prupe.1G555200_v2.0.a1
pyrus_communis	pycom08g18910 pycom15g36280
rosa_chinensis	RchiOBHm_Chr7g0227641
rosa_laevigata	RLG00000001631
rosa_multiflora	Rmu_co8489989.1_g000001 Rmu_sc0041066.1_g000001
rosa_roxburghii	Rroxscaffold_3G00231990
rosa_rugosa	Rorug07G0242500 Rorug07G0242600
rosa_samantha	Rh7AG396100 Rh7BG377700 Rh7CG414800 Rh7DG391700
rosa_wichuraiana	Rw7G032930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	828
Acc65I	GGTACC	1 cut(s)	1305
AccB1I	GGYRCC	6 cut(s)	43, 76, 121, 472, 602, 1305
AccB7I	CCANNNNNTGG	1 cut(s)	1111
AccI	GTMKAC	2 cut(s)	783, 987
AccII	CGCG	1 cut(s)	344
AclWI	GGATC	4 cut(s)	200, 929, 1096, 1109
AcoI	YGGCCR	1 cut(s)	639
AcsI	RAATTY	2 cut(s)	1130, 1469
AcuI	CTGAAG	4 cut(s)	320, 504, 711, 1232
AcyI	GRCGYC	6 cut(s)	77, 603, 825, 873, 927, 984
AdeI	CACNNNGTG	2 cut(s)	50, 1006
AfaI	GTAC	2 cut(s)	1049, 1307
AfiI	CCNNNNNNNGG	6 cut(s)	655, 806, 903, 937, 1039, 1111
AflIII	ACRYGT	3 cut(s)	1017, 1056, 1423
AgsI	TTSAA	9 cut(s)	238, 862, 1141, 1204, 1241, 1318, 1405, 1532, 1702
AjnI	CCWGG	5 cut(s)	312, 1110, 1218, 1230, 1714
AjuI	GAANNNNNNNTTGG	2 cut(s)	1346, 1378
Alw21I	GWGCWC	3 cut(s)	948, 1215, 1731
Alw26I	GTCTC	3 cut(s)	569, 623, 1388
AlwI	GGATC	4 cut(s)	200, 929, 1096, 1109
AlwNI	CAGNNNCTG	2 cut(s)	1111, 1544
Ama87I	CYCGRG	1 cut(s)	269
AoxI	GGCC	6 cut(s)	141, 318, 444, 639, 747, 997
ApaI	GGGCCC	1 cut(s)	751
ApeKI	GCWGC	6 cut(s)	26, 304, 358, 431, 755, 819
ApoI	RAATTY	2 cut(s)	1130, 1469
Asp700I	GAANNNNTTC	2 cut(s)	1058, 1697
Asp718I	GGTACC	1 cut(s)	1305
AspLEI	GCGC	5 cut(s)	79, 346, 605, 819, 909
AspS9I	GGNCC	8 cut(s)	319, 445, 747, 748, 1080, 1350, 1376, 1776
AsuC2I	CCSGG	2 cut(s)	752, 1194
AsuHPI	GGTGA	7 cut(s)	272, 331, 821, 877, 1037, 1465, 1723
AvaI	CYCGRG	1 cut(s)	269
AvaII	GGWCC	4 cut(s)	1080, 1350, 1376, 1776
AxyI	CCTNAGG	1 cut(s)	441
BaeGI	GKGCMC	1 cut(s)	751
BamHI	GGATCC	1 cut(s)	1101
BanI	GGYRCC	6 cut(s)	43, 76, 121, 472, 602, 1305
BanII	GRGCYC	2 cut(s)	751, 948
BauI	CACGAG	2 cut(s)	14, 332
Bbv12I	GWGCWC	3 cut(s)	948, 1215, 1731
BbvCI	CCTCAGC	3 cut(s)	6, 192, 1623
BbvI	GCAGC	6 cut(s)	13, 316, 345, 418, 742, 831
BccI	CCATC	2 cut(s)	1169, 1387
BceAI	ACGGC	3 cut(s)	137, 616, 997
BcgI	CGANNNNNNTGC	6 cut(s)	5, 39, 340, 374, 898, 932
BciT130I	CCWGG	5 cut(s)	314, 1112, 1220, 1232, 1716
BclI	TGATCA	2 cut(s)	885, 1326
BcnI	CCSGG	2 cut(s)	752, 1194
BcoDI	GTCTC	3 cut(s)	569, 623, 1388
BfaI	CTAG	2 cut(s)	852, 1656
BfmI	CTRYAG	1 cut(s)	1771
BfoI	RGCGCY	2 cut(s)	80, 606
Bme1390I	CCNGG	7 cut(s)	314, 752, 1112, 1194, 1220, 1232, 1716
Bme18I	GGWCC	4 cut(s)	1080, 1350, 1376, 1776
BmeT110I	CYCGRG	1 cut(s)	269
BmgT120I	GGNCC	8 cut(s)	319, 445, 747, 748, 1080, 1350, 1376, 1776
BmrFI	CCNGG	7 cut(s)	314, 752, 1112, 1194, 1220, 1232, 1716
BmrI	ACTGGG	2 cut(s)	967, 1532
BmsI	GCATC	3 cut(s)	478, 1131, 1618
BmuI	ACTGGG	2 cut(s)	967, 1532
BpmI	CTGGAG	4 cut(s)	311, 477, 956, 1133
Bpu10I	CCTNAGC	3 cut(s)	6, 192, 1623
BpuEI	CTTGAG	1 cut(s)	821
BpuMI	CCSGG	2 cut(s)	752, 1194
BsaHI	GRCGYC	6 cut(s)	77, 603, 825, 873, 927, 984
BsaI	GGTCTC	2 cut(s)	623, 1388
BsaJI	CCNNGG	7 cut(s)	153, 186, 585, 669, 750, 1298, 1715
BsaWI	WCCGGW	2 cut(s)	763, 1148
BsaXI	ACNNNNNCTCC	2 cut(s)	32, 62
Bsc4I	CCNNNNNNNGG	6 cut(s)	655, 806, 903, 937, 1039, 1111
Bse118I	RCCGGY	4 cut(s)	118, 361, 382, 715
Bse1I	ACTGG	5 cut(s)	962, 1105, 1430, 1538, 1682
Bse21I	CCTNAGG	1 cut(s)	441
BseBI	CCWGG	5 cut(s)	314, 1112, 1220, 1232, 1716
BseDI	CCNNGG	7 cut(s)	153, 186, 585, 669, 750, 1298, 1715
BseGI	GGATG	5 cut(s)	309, 1329, 1379, 1594, 1633
BseLI	CCNNNNNNNGG	6 cut(s)	655, 806, 903, 937, 1039, 1111
BseMII	CTCAG	8 cut(s)	183, 236, 432, 555, 836, 1254, 1536, 1614
BseNI	ACTGG	5 cut(s)	962, 1105, 1430, 1538, 1682
BseSI	GKGCMC	1 cut(s)	751
BseXI	GCAGC	6 cut(s)	13, 316, 345, 418, 742, 831
Bsh1236I	CGCG	1 cut(s)	344
Bsh1285I	CGRYCG	1 cut(s)	669
BshFI	GGCC	6 cut(s)	143, 320, 446, 641, 749, 999
BshNI	GGYRCC	6 cut(s)	43, 76, 121, 472, 602, 1305
BsiEI	CGRYCG	1 cut(s)	669
BsiHKAI	GWGCWC	3 cut(s)	948, 1215, 1731
BsiHKCI	CYCGRG	1 cut(s)	269
BslFI	GGGAC	1 cut(s)	632
BslI	CCNNNNNNNGG	6 cut(s)	655, 806, 903, 937, 1039, 1111
BsmAI	GTCTC	3 cut(s)	569, 623, 1388
BsmFI	GGGAC	1 cut(s)	632
BsnI	GGCC	6 cut(s)	143, 320, 446, 641, 749, 999
Bso31I	GGTCTC	2 cut(s)	623, 1388
BsoBI	CYCGRG	1 cut(s)	269
Bsp120I	GGGCCC	1 cut(s)	747
Bsp1286I	GDGCHC	4 cut(s)	751, 948, 1215, 1731
Bsp143I	GATC	9 cut(s)	205, 549, 885, 921, 1101, 1177, 1326, 1686, 1704
Bsp19I	CCATGG	1 cut(s)	1298
BspANI	GGCC	6 cut(s)	143, 320, 446, 641, 749, 999
BspCNI	CTCAG	8 cut(s)	184, 235, 433, 556, 837, 1255, 1537, 1615
BspFNI	CGCG	1 cut(s)	344
BspPI	GGATC	4 cut(s)	200, 929, 1096, 1109
BspQI	GCTCTTC	2 cut(s)	1112, 1242
BspT107I	GGYRCC	6 cut(s)	43, 76, 121, 472, 602, 1305
BspTNI	GGTCTC	2 cut(s)	623, 1388
BsrFI	RCCGGY	4 cut(s)	118, 361, 382, 715
BsrI	ACTGG	5 cut(s)	962, 1105, 1430, 1538, 1682
BssAI	RCCGGY	4 cut(s)	118, 361, 382, 715
BssECI	CCNNGG	7 cut(s)	153, 186, 585, 669, 750, 1298, 1715
BssMI	GATC	9 cut(s)	205, 549, 885, 921, 1101, 1177, 1326, 1686, 1704
BssNI	GRCGYC	6 cut(s)	77, 603, 825, 873, 927, 984
BssSI	CACGAG	2 cut(s)	14, 332
BssT1I	CCWWGG	3 cut(s)	186, 585, 1298
Bst2BI	CACGAG	2 cut(s)	14, 332
Bst2UI	CCWGG	5 cut(s)	314, 1112, 1220, 1232, 1716
Bst4CI	ACNGT	7 cut(s)	48, 580, 613, 898, 1080, 1504, 1528
Bst6I	CTCTTC	8 cut(s)	192, 237, 390, 537, 1065, 1112, 1205, 1242
BstACI	GRCGYC	6 cut(s)	77, 603, 825, 873, 927, 984
BstC8I	GCNNGC	7 cut(s)	24, 84, 150, 183, 384, 1516, 1712
BstDSI	CCRYGG	2 cut(s)	153, 1298
BstEII	GGTNACC	1 cut(s)	1222
BstENI	CCTNNNNNAGG	1 cut(s)	935
BstF5I	GGATG	5 cut(s)	309, 1329, 1379, 1594, 1633
BstFNI	CGCG	1 cut(s)	344
BstH2I	RGCGCY	2 cut(s)	80, 606
BstHHI	GCGC	5 cut(s)	79, 346, 605, 819, 909
BstKTI	GATC	9 cut(s)	208, 552, 888, 924, 1104, 1180, 1329, 1689, 1707
BstMAI	GTCTC	3 cut(s)	569, 623, 1388
BstMBI	GATC	9 cut(s)	205, 549, 885, 921, 1101, 1177, 1326, 1686, 1704
BstMCI	CGRYCG	1 cut(s)	669
BstNI	CCWGG	5 cut(s)	314, 1112, 1220, 1232, 1716
BstNSI	RCATGY	1 cut(s)	1427
BstPI	GGTNACC	1 cut(s)	1222
BstSCI	CCNGG	7 cut(s)	312, 750, 1110, 1192, 1218, 1230, 1714
BstSFI	CTRYAG	1 cut(s)	1771
BstSLI	GKGCMC	1 cut(s)	751
BstUI	CGCG	1 cut(s)	344
BstV1I	GCAGC	6 cut(s)	13, 316, 345, 418, 742, 831
BstX2I	RGATCY	1 cut(s)	1101
BstXI	CCANNNNNNTGG	1 cut(s)	613
BstYI	RGATCY	1 cut(s)	1101
Bsu36I	CCTNAGG	1 cut(s)	441
BsuRI	GGCC	6 cut(s)	143, 320, 446, 641, 749, 999
BtgI	CCRYGG	2 cut(s)	153, 1298
BtgZI	GCGATG	1 cut(s)	1689
BtsCI	GGATG	5 cut(s)	309, 1329, 1379, 1594, 1633
BtsIMutI	CAGTG	3 cut(s)	955, 1062, 1689
Cac8I	GCNNGC	7 cut(s)	24, 84, 150, 183, 384, 1516, 1712
CaiI	CAGNNNCTG	2 cut(s)	1111, 1544
CfoI	GCGC	5 cut(s)	79, 346, 605, 819, 909
Cfr10I	RCCGGY	4 cut(s)	118, 361, 382, 715
Cfr13I	GGNCC	8 cut(s)	319, 445, 747, 748, 1080, 1350, 1376, 1776
CseI	GACGC	3 cut(s)	881, 935, 973
CsiI	ACCWGGT	1 cut(s)	1218
Csp6I	GTAC	2 cut(s)	1048, 1306
CviAII	CATG	3 cut(s)	883, 1299, 1424
CviQI	GTAC	2 cut(s)	1048, 1306
DinI	GGCGCC	2 cut(s)	78, 604
DpnI	GATC	9 cut(s)	207, 551, 887, 923, 1103, 1179, 1328, 1688, 1706
DpnII	GATC	9 cut(s)	205, 549, 885, 921, 1101, 1177, 1326, 1686, 1704
DraIII	CACNNNGTG	2 cut(s)	50, 1006
EaeI	YGGCCR	1 cut(s)	639
Eam1104I	CTCTTC	8 cut(s)	192, 237, 390, 537, 1065, 1112, 1205, 1242
EarI	CTCTTC	8 cut(s)	192, 237, 390, 537, 1065, 1112, 1205, 1242
EciI	GGCGGA	3 cut(s)	188, 734, 1378
Ecl136II	GAGCTC	1 cut(s)	946
Eco130I	CCWWGG	3 cut(s)	186, 585, 1298
Eco24I	GRGCYC	2 cut(s)	751, 948
Eco31I	GGTCTC	2 cut(s)	623, 1388
Eco47I	GGWCC	4 cut(s)	1080, 1350, 1376, 1776
Eco53kI	GAGCTC	1 cut(s)	946
Eco57I	CTGAAG	4 cut(s)	320, 504, 711, 1232
Eco81I	CCTNAGG	1 cut(s)	441
Eco88I	CYCGRG	1 cut(s)	269
Eco91I	GGTNACC	1 cut(s)	1222
EcoICRI	GAGCTC	1 cut(s)	946
EcoNI	CCTNNNNNAGG	1 cut(s)	935
EcoO109I	RGGNCCY	4 cut(s)	319, 445, 747, 748
EcoO65I	GGTNACC	1 cut(s)	1222
EcoRI	GAATTC	1 cut(s)	1469
EcoRII	CCWGG	5 cut(s)	312, 1110, 1218, 1230, 1714
EcoT14I	CCWWGG	3 cut(s)	186, 585, 1298
EcoT38I	GRGCYC	2 cut(s)	751, 948
EgeI	GGCGCC	2 cut(s)	78, 604
EheI	GGCGCC	2 cut(s)	78, 604
ErhI	CCWWGG	3 cut(s)	186, 585, 1298
FaeI	CATG	3 cut(s)	886, 1302, 1427
FaiI	YATR	7 cut(s)	635, 884, 1300, 1412, 1425, 1440, 1643
FalI	AAGNNNNNCTT	2 cut(s)	860, 892
FaqI	GGGAC	1 cut(s)	632
FatI	CATG	3 cut(s)	882, 1298, 1423
FbaI	TGATCA	2 cut(s)	885, 1326
FblI	GTMKAC	2 cut(s)	783, 987
FokI	GGATG	5 cut(s)	296, 1336, 1366, 1601, 1640
FriOI	GRGCYC	2 cut(s)	751, 948
FspBI	CTAG	2 cut(s)	852, 1656
GlaI	GCGC	5 cut(s)	78, 345, 604, 818, 908
GsuI	CTGGAG	4 cut(s)	311, 477, 956, 1133
HaeII	RGCGCY	2 cut(s)	80, 606
HaeIII	GGCC	6 cut(s)	143, 320, 446, 641, 749, 999
HgaI	GACGC	3 cut(s)	881, 935, 973
HhaI	GCGC	5 cut(s)	79, 346, 605, 819, 909
Hin1I	GRCGYC	6 cut(s)	77, 603, 825, 873, 927, 984
Hin1II	CATG	3 cut(s)	886, 1302, 1427
Hin6I	GCGC	5 cut(s)	77, 344, 603, 817, 907
HinP1I	GCGC	5 cut(s)	77, 344, 603, 817, 907
HincII	GTYRAC	3 cut(s)	592, 988, 1174
HindII	GTYRAC	3 cut(s)	592, 988, 1174
HindIII	AAGCTT	1 cut(s)	498
HinfI	GANTC	7 cut(s)	68, 352, 709, 795, 802, 1152, 1197
HphI	GGTGA	7 cut(s)	272, 331, 821, 877, 1037, 1465, 1723
Hpy166II	GTNNAC	7 cut(s)	339, 592, 784, 975, 988, 1062, 1174
Hpy188I	TCNGA	6 cut(s)	73, 846, 950, 1127, 1546, 1798
Hpy8I	GTNNAC	7 cut(s)	339, 592, 784, 975, 988, 1062, 1174
Hpy99I	CGWCG	4 cut(s)	221, 827, 929, 989
HpyCH4III	ACNGT	7 cut(s)	48, 580, 613, 898, 1080, 1504, 1528
HpyCH4IV	ACGT	5 cut(s)	252, 786, 825, 1017, 1058
HpyCH4V	TGCA	2 cut(s)	1518, 1648
HpySE526I	ACGT	5 cut(s)	252, 786, 825, 1017, 1058
Hsp92I	GRCGYC	6 cut(s)	77, 603, 825, 873, 927, 984
Hsp92II	CATG	3 cut(s)	886, 1302, 1427
HspAI	GCGC	5 cut(s)	77, 344, 603, 817, 907
KasI	GGCGCC	2 cut(s)	76, 602
KpnI	GGTACC	1 cut(s)	1309
KroI	GCCGGC	1 cut(s)	382
KroNI	GCCGGC	1 cut(s)	384
Ksp22I	TGATCA	2 cut(s)	885, 1326
Kzo9I	GATC	9 cut(s)	205, 549, 885, 921, 1101, 1177, 1326, 1686, 1704
LguI	GCTCTTC	2 cut(s)	1112, 1242
Lsp1109I	GCAGC	6 cut(s)	13, 316, 345, 418, 742, 831
LweI	GCATC	3 cut(s)	478, 1131, 1618
MabI	ACCWGGT	1 cut(s)	1218
MaeI	CTAG	2 cut(s)	852, 1656
MaeII	ACGT	5 cut(s)	252, 786, 825, 1017, 1058
MaeIII	GTNAC	7 cut(s)	97, 559, 580, 809, 1222, 1489, 1498
MalI	GATC	9 cut(s)	207, 551, 887, 923, 1103, 1179, 1328, 1688, 1706
MboI	GATC	9 cut(s)	205, 549, 885, 921, 1101, 1177, 1326, 1686, 1704
MfeI	CAATTG	1 cut(s)	1241
MflI	RGATCY	1 cut(s)	1101
MhlI	GDGCHC	4 cut(s)	751, 948, 1215, 1731
MluCI	AATT	3 cut(s)	1130, 1241, 1469
Mly113I	GGCGCC	2 cut(s)	77, 603
MlyI	GAGTC	4 cut(s)	77, 346, 703, 1191
MmeI	TCCRAC	1 cut(s)	51
MroNI	GCCGGC	1 cut(s)	382
MroXI	GAANNNNTTC	2 cut(s)	1058, 1697
MseI	TTAA	3 cut(s)	366, 1506, 1801
MspA1I	CMGCKG	1 cut(s)	358
MspR9I	CCNGG	7 cut(s)	314, 752, 1112, 1194, 1220, 1232, 1716
MunI	CAATTG	1 cut(s)	1241
MvaI	CCWGG	5 cut(s)	314, 1112, 1220, 1232, 1716
MvnI	CGCG	1 cut(s)	344
NaeI	GCCGGC	1 cut(s)	384
NarI	GGCGCC	2 cut(s)	77, 603
NciI	CCSGG	2 cut(s)	752, 1194
NcoI	CCATGG	1 cut(s)	1298
NdeII	GATC	9 cut(s)	205, 549, 885, 921, 1101, 1177, 1326, 1686, 1704
NgoMIV	GCCGGC	1 cut(s)	382
NlaIII	CATG	3 cut(s)	886, 1302, 1427
NmeAIII	GCCGAG	4 cut(s)	112, 460, 1417, 1630
NmuCI	GTSAC	4 cut(s)	97, 559, 809, 1489
NspI	RCATGY	1 cut(s)	1427
PciI	ACATGT	1 cut(s)	1423
PciSI	GCTCTTC	2 cut(s)	1112, 1242
PcsI	WCGNNNNNNNCGW	1 cut(s)	819
PdiI	GCCGGC	1 cut(s)	384
PdmI	GAANNNNTTC	2 cut(s)	1058, 1697
PfeI	GAWTC	3 cut(s)	795, 802, 1152
PflFI	GACNNNGTC	1 cut(s)	1487
PflMI	CCANNNNNTGG	1 cut(s)	1111
PfoI	TCCNGGA	3 cut(s)	312, 1110, 1192
PleI	GAGTC	4 cut(s)	76, 346, 703, 1191
PluTI	GGCGCC	2 cut(s)	80, 606
PpsI	GAGTC	4 cut(s)	76, 346, 703, 1191
PscI	ACATGT	1 cut(s)	1423
Psp124BI	GAGCTC	1 cut(s)	948
Psp6I	CCWGG	5 cut(s)	312, 1110, 1218, 1230, 1714
PspEI	GGTNACC	1 cut(s)	1222
PspGI	CCWGG	5 cut(s)	312, 1110, 1218, 1230, 1714
PspOMI	GGGCCC	1 cut(s)	747
PspPI	GGNCC	8 cut(s)	319, 445, 747, 748, 1080, 1350, 1376, 1776
PstNI	CAGNNNCTG	2 cut(s)	1111, 1544
PsuI	RGATCY	1 cut(s)	1101
PsyI	GACNNNGTC	1 cut(s)	1487
RsaI	GTAC	2 cut(s)	1049, 1307
RsaNI	GTAC	2 cut(s)	1048, 1306
SacI	GAGCTC	1 cut(s)	948
SalI	GTCGAC	1 cut(s)	986
SapI	GCTCTTC	2 cut(s)	1112, 1242
SaqAI	TTAA	3 cut(s)	366, 1506, 1801
Sau3AI	GATC	9 cut(s)	205, 549, 885, 921, 1101, 1177, 1326, 1686, 1704
Sau96I	GGNCC	8 cut(s)	319, 445, 747, 748, 1080, 1350, 1376, 1776
SchI	GAGTC	4 cut(s)	77, 346, 703, 1191
ScrFI	CCNGG	7 cut(s)	314, 752, 1112, 1194, 1220, 1232, 1716
SduI	GDGCHC	4 cut(s)	751, 948, 1215, 1731
SexAI	ACCWGGT	1 cut(s)	1218
SfaNI	GCATC	3 cut(s)	478, 1131, 1618
SfcI	CTRYAG	1 cut(s)	1771
SfoI	GGCGCC	2 cut(s)	78, 604
SinI	GGWCC	4 cut(s)	1080, 1350, 1376, 1776
SmlI	CTYRAG	1 cut(s)	836
SmoI	CTYRAG	1 cut(s)	836
Sse9I	AATT	3 cut(s)	1130, 1241, 1469
SspDI	GGCGCC	2 cut(s)	76, 602
SspMI	CTAG	2 cut(s)	852, 1656
SstI	GAGCTC	1 cut(s)	948
StyD4I	CCNGG	7 cut(s)	312, 750, 1110, 1192, 1218, 1230, 1714
StyI	CCWWGG	3 cut(s)	186, 585, 1298
TaaI	ACNGT	7 cut(s)	48, 580, 613, 898, 1080, 1504, 1528
TaiI	ACGT	5 cut(s)	255, 789, 828, 1020, 1061
TaqI	TCGA	5 cut(s)	702, 924, 987, 1134, 1691
TaqII	GACCGA	2 cut(s)	116, 683
TasI	AATT	3 cut(s)	1130, 1241, 1469
TauI	GCSGC	7 cut(s)	82, 277, 349, 644, 662, 665, 698
TfiI	GAWTC	3 cut(s)	795, 802, 1152
Tru1I	TTAA	3 cut(s)	366, 1506, 1801
Tru9I	TTAA	3 cut(s)	366, 1506, 1801
TscAI	CASTG	3 cut(s)	962, 1069, 1689
TseFI	GTSAC	4 cut(s)	97, 559, 809, 1489
TseI	GCWGC	6 cut(s)	26, 304, 358, 431, 755, 819
Tsp45I	GTSAC	4 cut(s)	97, 559, 809, 1489
TspDTI	ATGAA	2 cut(s)	1078, 1083
TspGWI	ACGGA	1 cut(s)	1614
TspRI	CASTG	3 cut(s)	962, 1069, 1689
Tth111I	GACNNNGTC	1 cut(s)	1487
Van91I	CCANNNNNTGG	1 cut(s)	1111
VpaK11BI	GGWCC	4 cut(s)	1080, 1350, 1376, 1776
XagI	CCTNNNNNAGG	1 cut(s)	935
XapI	RAATTY	2 cut(s)	1130, 1469
XceI	RCATGY	1 cut(s)	1427
XcmI	CCANNNNNNNNNTGG	1 cut(s)	151
XmiI	GTMKAC	2 cut(s)	783, 987
XmnI	GAANNNNTTC	2 cut(s)	1058, 1697
XspI	CTAG	2 cut(s)	852, 1656
ZraI	GACGTC	1 cut(s)	826

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.