Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0010228

Physical Location & Seq

Genomic Coordinates Reverse (-)

291172 .. 295641

Gene Structure 4470 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g00440.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

ATGGCGCTCAGAGTTTACTGCACCACTCCCTCTCCCTCTTTACTCTGCAATGCAACTGCCGCGTCCTCCCACGCGCTCGATGCCTCCCTCATCCAACGCGCCGTTGTTCTCGCCGACAAATCCGCCGGCTTCACCTCTCCCCACCCCAACTTCGGATGCGTCATCGCCACTCCTTCCGGCAAAGTCGCCGGCGAGGGCTTCCTCTACGCCCAGGGCACCAAGTCCGCCGAAGTCCTCGCCGTCGAAGCCGCCGGGGAGCTCTCCCGCAAAGCCACAGCTTATCTCAACATGGAGCCCGGGGACTGCCACGGCGACCACTCCGCCGTCTCCGCCCTCATTCAGGGTGGGATTGAGAGAGTGGTGATTGGATTAAGGCATCCATTGCAGCATCTGAGAGGGAATGCAATAAGGGCTTTCAGAAGTGAAGGCTTGCAAGTTGACGTGCTCGGTGAGGACCTCAACACCAAGCTCTTCGAGGAAGCACGCAAGTCGTGCCTTGTAGTGAATGCTCCTTTGATTTGTAGAGCTGCTTCTCAAGTCCCCTTCTCTGTTCTCAAGTATGCTATGACCCTTGATGGAAAGATTGCTGCTTCCAGTGGACATGCCTCGTGGATTAGCAGCAAGACTTCTAGAAACCGAGTTTTTGAACTCCGGGGTAGAAGTGATGCCATCATTGTAGGGGGAAATACTGCACGCAGGGACAATCCGAGGTTAACTGCAAGGCACGGAGGTGGCCATATGCCCATGCGGATTGTGATGACACAGACGCTTGATCTCCCCGAGGAAGCAAACCTTTGGGACACCTCTGATGTTTCTACTATAGTTGTGACACAGAGGGGTGCGAGAAGGAGCTTTCAGAAGTTTCTTGCGTCTAAAGGAATTGAAGTCGTGGAGTTTGACATCTTGAACCCCAGAGAAGTAATGGAGTACTTCCATGATCGTGGTTATCTTTCAGTTTTGTGGGAGTGCGGAGGGACACTAGCTGCATCTGCTATTTCATCTGGAGTAATACATAAGGTCTTTGCATTTGTTGCTCCTAAGATAATTGGTGGAAGAAATGCTCCTTCCCCTGTAGGTGAACTTGGGATGGTTGAAATGACACAAGCCTTGGATTTAATTGATGTGTGCTATGAACAGGTTGGACCTGACATGCTTGTTAGTGGTTTTCTTCAACCCATACCAGATCTGACTCCTGTGATTCCATCAGTTGATGAAACATATGAAATTGATCCAACTGTCACTCCTTATGACTCAAGAATCATATTCTTCTACAAAACATGGGATCCTTATGGTGCTTTCTCGAATTTCTCTCCTCACCCAATTAAGATGCTTGATGTTGATGGTGCTTATTCCACTTGGTTGAGTGTAGAGCATTACTACCAGGCTCACAAATTTGTTGGGGTGGATGATCCTGTGGCACGAGATTGTGCTGAAAATATCAAGACTGCAAAAAGTCCAGAAGAAGCAGCACGGTTAGGCAGGTCAATGCAGAGGCGGCACCCTAATTTGGTAAGATCCGATTGGGAAAGTGTCAAGATTGATGTGATGTACAGGGCACTAAAATGCAAGTTCTCAATATACCCACATTTGAATTCTATGTTGCTGTCAACTGCTGGTTCTGTTCTTGTTGAAGCTTCACCGCATGATCTTTTCTGGGGTGGAGGCCGGGATGGGGAAGGCCTAAATTATCTGGGGAGGCTTTTGATGCAGTTGAGATCAGAGTTTCTTGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004159 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016491 GO:0016627 GO:0016628 GO:0016787 GO:0016798 GO:0016799 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0055114 GO:0071704 GO:0090304 GO:1901135 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko00740 ko01100 ko01110 ko02024 map00740 map01100 map01110 map02024

Pfam Domains

Protein Families

DUF1768 RibD_C dCMP_cyt_deam_1

Protein Analysis

578

Amino Acids

63.05

Weight (kDa)

6.29

Isoelectric Point (pI)

40.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RibD_C	PF01872	182 - 385	2.3e-42	RibD C-terminal domain
NADAR	PF08719	422 - 575	7.6e-36	NADAR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010228)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47390 AT3G47390
fragaria_vesca	FvH4_6g00440 FvH4_6g00440
malus_domestica	MD04G1245400.v1.1 MD13G1061000.v1.1
prunus_persica	Prupe.6G362000_v2.0.a1
pyrus_communis	pycom04g21610 pycom06g10780 pycom12g23910
rosa_chinensis	RchiOBHm_Chr3g0447811
rosa_laevigata	RLG00000025969
rosa_multiflora	Rmu_co8480445.1_g000001 Rmu_ssc0000391.1_g000018
rosa_roxburghii	Rroxscaffold_6G00426010
rosa_rugosa	Rorug02G0605900
rosa_samantha	Rh3AG005400 Rh3BG005000 Rh3CG005300 Rh3DG005500
rosa_wichuraiana	Rw3G000400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1470
AccB1I	GGYRCC	2 cut(s)	215, 1497
AccII	CGCG	3 cut(s)	62, 74, 99
AclWI	GGATC	5 cut(s)	1223, 1277, 1290, 1403, 1509
AcoI	YGGCCR	1 cut(s)	733
AcsI	RAATTY	3 cut(s)	1303, 1391, 1591
AfaI	GTAC	2 cut(s)	929, 1550
AfiI	CCNNNNNNNGG	4 cut(s)	152, 340, 1507, 1672
AgsI	TTSAA	7 cut(s)	647, 884, 907, 1094, 1172, 1591, 1631
AjiI	CACGTC	1 cut(s)	442
AjnI	CCWGG	2 cut(s)	210, 1380
AleI	CACNNNNGTG	1 cut(s)	729
AluBI	AGCT	7 cut(s)	259, 278, 469, 527, 852, 983, 1634
AluI	AGCT	7 cut(s)	259, 278, 469, 527, 852, 983, 1634
Alw21I	GWGCWC	2 cut(s)	261, 447
Alw26I	GTCTC	1 cut(s)	331
AlwI	GGATC	5 cut(s)	1223, 1277, 1290, 1403, 1509
AlwNI	CAGNNNCTG	1 cut(s)	391
Ama87I	CYCGRG	2 cut(s)	296, 779
AoxI	GGCC	3 cut(s)	733, 1663, 1678
ApeKI	GCWGC	6 cut(s)	385, 527, 587, 618, 983, 1466
ApoI	RAATTY	3 cut(s)	1303, 1391, 1591
AspLEI	GCGC	3 cut(s)	7, 76, 101
AspS9I	GGNCC	2 cut(s)	454, 1142
AsuC2I	CCSGG	5 cut(s)	253, 297, 298, 653, 1667
AsuHPI	GGTGA	6 cut(s)	124, 373, 461, 1088, 1307, 1629
AvaI	CYCGRG	2 cut(s)	296, 779
AvaII	GGWCC	2 cut(s)	454, 1142
BaeGI	GKGCMC	2 cut(s)	218, 1558
BalI	TGGCCA	1 cut(s)	735
BamHI	GGATCC	1 cut(s)	1282
BanI	GGYRCC	2 cut(s)	215, 1497
BanII	GRGCYC	2 cut(s)	261, 297
BarI	GAAGNNNNNNTAC	2 cut(s)	514, 546
BauI	CACGAG	2 cut(s)	607, 1419
Bbv12I	GWGCWC	2 cut(s)	261, 447
BbvI	GCAGC	6 cut(s)	397, 514, 574, 630, 970, 1478
BccI	CCATC	6 cut(s)	569, 677, 1081, 1210, 1334, 1664
BceAI	ACGGC	4 cut(s)	86, 224, 308, 325
BcgI	CGANNNNNNTGC	2 cut(s)	471, 505
BciT130I	CCWGG	2 cut(s)	212, 1382
BcnI	CCSGG	5 cut(s)	253, 297, 298, 653, 1667
BcoDI	GTCTC	1 cut(s)	331
BfaI	CTAG	2 cut(s)	630, 980
BfmI	CTRYAG	2 cut(s)	819, 1071
BfoI	RGCGCY	1 cut(s)	8
BfuAI	ACCTGC	1 cut(s)	1470
BglII	AGATCT	1 cut(s)	1183
BisI	GCNGC	9 cut(s)	60, 249, 386, 528, 588, 619, 984, 1467, 1496
BlsI	GCNGC	9 cut(s)	61, 250, 387, 529, 589, 620, 985, 1468, 1497
BmcAI	AGTACT	1 cut(s)	929
Bme1390I	CCNGG	7 cut(s)	212, 253, 297, 298, 653, 1382, 1667
Bme18I	GGWCC	2 cut(s)	454, 1142
BmeT110I	CYCGRG	2 cut(s)	296, 779
BmgBI	CACGTC	1 cut(s)	442
BmgT120I	GGNCC	2 cut(s)	454, 1142
BmiI	GGNNCC	4 cut(s)	217, 294, 1284, 1499
BmrFI	CCNGG	7 cut(s)	212, 253, 297, 298, 653, 1382, 1667
BmsI	GCATC	8 cut(s)	70, 146, 385, 397, 655, 995, 1317, 1695
BpmI	CTGGAG	1 cut(s)	1023
BpuEI	CTTGAG	3 cut(s)	519, 539, 1237
BpuMI	CCSGG	5 cut(s)	253, 297, 298, 653, 1667
BsaXI	ACNNNNNCTCC	4 cut(s)	16, 46, 1225, 1255
Bsc4I	CCNNNNNNNGG	4 cut(s)	152, 340, 1507, 1672
Bse118I	RCCGGY	2 cut(s)	125, 188
Bse1I	ACTGG	1 cut(s)	594
Bse3DI	GCAATG	2 cut(s)	55, 380
BseBI	CCWGG	2 cut(s)	212, 1382
BseGI	GGATG	6 cut(s)	90, 161, 376, 1092, 1411, 1675
BseLI	CCNNNNNNNGG	4 cut(s)	152, 340, 1507, 1672
BseMI	GCAATG	2 cut(s)	55, 380
BseMII	CTCAG	2 cut(s)	22, 383
BseNI	ACTGG	1 cut(s)	594
BseRI	GAGGAG	1 cut(s)	1302
BseSI	GKGCMC	2 cut(s)	218, 1558
BseXI	GCAGC	6 cut(s)	397, 514, 574, 630, 970, 1478
BsgI	GTGCAG	2 cut(s)	4, 675
Bsh1236I	CGCG	3 cut(s)	62, 74, 99
BshFI	GGCC	3 cut(s)	735, 1665, 1680
BshNI	GGYRCC	2 cut(s)	215, 1497
BsiHKAI	GWGCWC	2 cut(s)	261, 447
BsiHKCI	CYCGRG	2 cut(s)	296, 779
BsiSI	CCGG	7 cut(s)	126, 177, 189, 252, 297, 652, 1666
BslFI	GGGAC	5 cut(s)	314, 524, 713, 812, 988
BslI	CCNNNNNNNGG	4 cut(s)	152, 340, 1507, 1672
BsmAI	GTCTC	1 cut(s)	331
BsmBI	CGTCTC	1 cut(s)	331
BsmFI	GGGAC	5 cut(s)	314, 524, 713, 812, 988
BsmI	GAATGC	2 cut(s)	406, 511
BsnI	GGCC	3 cut(s)	735, 1665, 1680
BsoBI	CYCGRG	2 cut(s)	296, 779
Bsp1286I	GDGCHC	5 cut(s)	218, 261, 297, 447, 1558
Bsp1407I	TGTACA	1 cut(s)	1548
Bsp143I	GATC	9 cut(s)	772, 937, 1183, 1228, 1282, 1408, 1514, 1645, 1715
BspANI	GGCC	3 cut(s)	735, 1665, 1680
BspCNI	CTCAG	2 cut(s)	21, 384
BspFNI	CGCG	3 cut(s)	62, 74, 99
BspLI	GGNNCC	4 cut(s)	217, 294, 1284, 1499
BspMI	ACCTGC	1 cut(s)	1470
BspPI	GGATC	5 cut(s)	1223, 1277, 1290, 1403, 1509
BspQI	GCTCTTC	1 cut(s)	476
BspT107I	GGYRCC	2 cut(s)	215, 1497
BsrDI	GCAATG	2 cut(s)	55, 380
BsrFI	RCCGGY	2 cut(s)	125, 188
BsrGI	TGTACA	1 cut(s)	1548
BsrI	ACTGG	1 cut(s)	594
BssAI	RCCGGY	2 cut(s)	125, 188
BssMI	GATC	9 cut(s)	772, 937, 1183, 1228, 1282, 1408, 1514, 1645, 1715
BssSI	CACGAG	2 cut(s)	607, 1419
BssT1I	CCWWGG	1 cut(s)	1107
Bst2BI	CACGAG	2 cut(s)	607, 1419
Bst2UI	CCWGG	2 cut(s)	212, 1382
Bst4CI	ACNGT	2 cut(s)	1237, 1473
Bst6I	CTCTTC	1 cut(s)	476
BstAPI	GCANNNNNTGC	3 cut(s)	382, 492, 1031
BstAUI	TGTACA	1 cut(s)	1548
BstC8I	GCNNGC	5 cut(s)	127, 190, 431, 484, 694
BstDEI	CTNAG	3 cut(s)	8, 392, 1038
BstDSI	CCRYGG	1 cut(s)	307
BstENI	CCTNNNNNAGG	1 cut(s)	338
BstF5I	GGATG	6 cut(s)	90, 161, 376, 1092, 1411, 1675
BstFNI	CGCG	3 cut(s)	62, 74, 99
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	3 cut(s)	7, 76, 101
BstKTI	GATC	9 cut(s)	775, 940, 1186, 1231, 1285, 1411, 1517, 1648, 1718
BstMAI	GTCTC	1 cut(s)	331
BstMBI	GATC	9 cut(s)	772, 937, 1183, 1228, 1282, 1408, 1514, 1645, 1715
BstNI	CCWGG	2 cut(s)	212, 1382
BstNSI	RCATGY	2 cut(s)	605, 1153
BstSCI	CCNGG	7 cut(s)	210, 251, 295, 296, 651, 1380, 1665
BstSFI	CTRYAG	2 cut(s)	819, 1071
BstSLI	GKGCMC	2 cut(s)	218, 1558
BstUI	CGCG	3 cut(s)	62, 74, 99
BstV1I	GCAGC	6 cut(s)	397, 514, 574, 630, 970, 1478
BstX2I	RGATCY	3 cut(s)	1183, 1282, 1514
BstXI	CCANNNNNNTGG	1 cut(s)	941
BstYI	RGATCY	3 cut(s)	1183, 1282, 1514
BsuRI	GGCC	3 cut(s)	735, 1665, 1680
BtgI	CCRYGG	1 cut(s)	307
BtgZI	GCGATG	1 cut(s)	148
BtrI	CACGTC	1 cut(s)	442
BtsCI	GGATG	6 cut(s)	90, 161, 376, 1092, 1411, 1675
BtsIMutI	CAGTG	1 cut(s)	601
BveI	ACCTGC	1 cut(s)	1470
Cac8I	GCNNGC	5 cut(s)	127, 190, 431, 484, 694
CaiI	CAGNNNCTG	1 cut(s)	391
CfoI	GCGC	3 cut(s)	7, 76, 101
Cfr10I	RCCGGY	2 cut(s)	125, 188
Cfr13I	GGNCC	2 cut(s)	454, 1142
Cfr9I	CCCGGG	1 cut(s)	296
CseI	GACGC	4 cut(s)	51, 148, 775, 858
Csp6I	GTAC	2 cut(s)	928, 1549
CviAII	CATG	7 cut(s)	289, 602, 745, 935, 1150, 1278, 1643
CviQI	GTAC	2 cut(s)	928, 1549
DdeI	CTNAG	3 cut(s)	8, 392, 1038
DpnI	GATC	9 cut(s)	774, 939, 1185, 1230, 1284, 1410, 1516, 1647, 1717
DpnII	GATC	9 cut(s)	772, 937, 1183, 1228, 1282, 1408, 1514, 1645, 1715
EaeI	YGGCCR	1 cut(s)	733
Eam1104I	CTCTTC	1 cut(s)	476
EarI	CTCTTC	1 cut(s)	476
EciI	GGCGGA	4 cut(s)	112, 214, 310, 319
Ecl136II	GAGCTC	1 cut(s)	259
Eco130I	CCWWGG	1 cut(s)	1107
Eco147I	AGGCCT	1 cut(s)	1680
Eco24I	GRGCYC	2 cut(s)	261, 297
Eco47I	GGWCC	2 cut(s)	454, 1142
Eco53kI	GAGCTC	1 cut(s)	259
Eco88I	CYCGRG	2 cut(s)	296, 779
EcoICRI	GAGCTC	1 cut(s)	259
EcoNI	CCTNNNNNAGG	1 cut(s)	338
EcoO109I	RGGNCCY	1 cut(s)	454
EcoRI	GAATTC	1 cut(s)	1591
EcoRII	CCWGG	2 cut(s)	210, 1380
EcoT14I	CCWWGG	1 cut(s)	1107
EcoT38I	GRGCYC	2 cut(s)	261, 297
ErhI	CCWWGG	1 cut(s)	1107
Esp3I	CGTCTC	1 cut(s)	331
FaeI	CATG	7 cut(s)	292, 605, 748, 938, 1153, 1281, 1646
FalI	AAGNNNNNCTT	2 cut(s)	777, 809
FaqI	GGGAC	5 cut(s)	314, 524, 713, 812, 988
FatI	CATG	7 cut(s)	288, 601, 744, 934, 1149, 1277, 1642
FauI	CCCGC	1 cut(s)	272
FauNDI	CATATG	2 cut(s)	738, 1219
Fnu4HI	GCNGC	9 cut(s)	60, 249, 386, 528, 588, 619, 984, 1467, 1496
FokI	GGATG	6 cut(s)	77, 168, 363, 1099, 1418, 1682
FriOI	GRGCYC	2 cut(s)	261, 297
Fsp4HI	GCNGC	9 cut(s)	60, 249, 386, 528, 588, 619, 984, 1467, 1496
FspBI	CTAG	2 cut(s)	630, 980
GlaI	GCGC	3 cut(s)	6, 75, 100
GluI	GCNGC	9 cut(s)	60, 249, 386, 528, 588, 619, 984, 1467, 1496
GsuI	CTGGAG	1 cut(s)	1023
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	3 cut(s)	735, 1665, 1680
HapII	CCGG	7 cut(s)	126, 177, 189, 252, 297, 652, 1666
HgaI	GACGC	4 cut(s)	51, 148, 775, 858
HhaI	GCGC	3 cut(s)	7, 76, 101
Hin1II	CATG	7 cut(s)	292, 605, 748, 938, 1153, 1281, 1646
Hin6I	GCGC	3 cut(s)	5, 74, 99
HinP1I	GCGC	3 cut(s)	5, 74, 99
HincII	GTYRAC	3 cut(s)	439, 714, 1608
HindII	GTYRAC	3 cut(s)	439, 714, 1608
HindIII	AAGCTT	1 cut(s)	1632
HinfI	GANTC	4 cut(s)	1189, 1198, 1250, 1257
HpaI	GTTAAC	1 cut(s)	714
HpaII	CCGG	7 cut(s)	126, 177, 189, 252, 297, 652, 1666
HphI	GGTGA	6 cut(s)	124, 373, 461, 1088, 1307, 1629
Hpy166II	GTNNAC	6 cut(s)	16, 439, 599, 714, 1079, 1608
Hpy188III	TCNNGA	9 cut(s)	630, 904, 1002, 1254, 1300, 1441, 1457, 1534, 1727
Hpy8I	GTNNAC	6 cut(s)	16, 439, 599, 714, 1079, 1608
Hpy99I	CGWCG	1 cut(s)	245
HpyAV	CCTTC	6 cut(s)	183, 419, 553, 840, 1074, 1670
HpyCH4III	ACNGT	2 cut(s)	1237, 1473
HpyCH4IV	ACGT	1 cut(s)	441
HpyF3I	CTNAG	3 cut(s)	8, 392, 1038
HpySE526I	ACGT	1 cut(s)	441
Hsp92II	CATG	7 cut(s)	292, 605, 748, 938, 1153, 1281, 1646
HspAI	GCGC	3 cut(s)	5, 74, 99
KroI	GCCGGC	2 cut(s)	125, 188
KroNI	GCCGGC	2 cut(s)	127, 190
KspAI	GTTAAC	1 cut(s)	714
Kzo9I	GATC	9 cut(s)	772, 937, 1183, 1228, 1282, 1408, 1514, 1645, 1715
LguI	GCTCTTC	1 cut(s)	476
LmnI	GCTCC	6 cut(s)	256, 292, 514, 849, 1039, 1066
Lsp1109I	GCAGC	6 cut(s)	397, 514, 574, 630, 970, 1478
LweI	GCATC	8 cut(s)	70, 146, 385, 397, 655, 995, 1317, 1695
MaeI	CTAG	2 cut(s)	630, 980
MaeII	ACGT	1 cut(s)	441
MaeIII	GTNAC	2 cut(s)	826, 1237
MalI	GATC	9 cut(s)	774, 939, 1185, 1230, 1284, 1410, 1516, 1647, 1717
MboI	GATC	9 cut(s)	772, 937, 1183, 1228, 1282, 1408, 1514, 1645, 1715
MboII	GAAGA	5 cut(s)	463, 1065, 1160, 1258, 1472
MflI	RGATCY	3 cut(s)	1183, 1282, 1514
MhlI	GDGCHC	5 cut(s)	218, 261, 297, 447, 1558
MlsI	TGGCCA	1 cut(s)	735
MluNI	TGGCCA	1 cut(s)	735
MlyI	GAGTC	2 cut(s)	1183, 1244
MmeI	TCCRAC	3 cut(s)	118, 1120, 1256
Mox20I	TGGCCA	1 cut(s)	735
MreI	CGCCGGCG	1 cut(s)	188
MroNI	GCCGGC	2 cut(s)	125, 188
MscI	TGGCCA	1 cut(s)	735
MseI	TTAA	4 cut(s)	371, 713, 1115, 1323
MslI	CAYNNNNRTG	3 cut(s)	729, 939, 1561
Msp20I	TGGCCA	1 cut(s)	735
MspI	CCGG	7 cut(s)	126, 177, 189, 252, 297, 652, 1666
MspR9I	CCNGG	7 cut(s)	212, 253, 297, 298, 653, 1382, 1667
Mva1269I	GAATGC	2 cut(s)	406, 511
MvaI	CCWGG	2 cut(s)	212, 1382
MvnI	CGCG	3 cut(s)	62, 74, 99
NaeI	GCCGGC	2 cut(s)	127, 190
NciI	CCSGG	5 cut(s)	253, 297, 298, 653, 1667
NdeI	CATATG	2 cut(s)	738, 1219
NdeII	GATC	9 cut(s)	772, 937, 1183, 1228, 1282, 1408, 1514, 1645, 1715
NgoMIV	GCCGGC	2 cut(s)	125, 188
NlaIII	CATG	7 cut(s)	292, 605, 748, 938, 1153, 1281, 1646
NlaIV	GGNNCC	4 cut(s)	217, 294, 1284, 1499
NmuCI	GTSAC	2 cut(s)	826, 1237
NspI	RCATGY	2 cut(s)	605, 1153
OliI	CACNNNNGTG	1 cut(s)	729
PasI	CCCWGGG	1 cut(s)	211
PceI	AGGCCT	1 cut(s)	1680
PciSI	GCTCTTC	1 cut(s)	476
PctI	GAATGC	2 cut(s)	406, 511
PdiI	GCCGGC	2 cut(s)	127, 190
PfeI	GAWTC	2 cut(s)	1198, 1257
PkrI	GCNGC	9 cut(s)	61, 250, 387, 529, 589, 620, 985, 1468, 1497
PleI	GAGTC	2 cut(s)	1183, 1244
PpsI	GAGTC	2 cut(s)	1183, 1244
PpuMI	RGGWCCY	1 cut(s)	454
Psp124BI	GAGCTC	1 cut(s)	261
Psp5II	RGGWCCY	1 cut(s)	454
Psp6I	CCWGG	2 cut(s)	210, 1380
PspGI	CCWGG	2 cut(s)	210, 1380
PspN4I	GGNNCC	4 cut(s)	217, 294, 1284, 1499
PspPI	GGNCC	2 cut(s)	454, 1142
PspPPI	RGGWCCY	1 cut(s)	454
PstNI	CAGNNNCTG	1 cut(s)	391
PsuI	RGATCY	3 cut(s)	1183, 1282, 1514
RsaI	GTAC	2 cut(s)	929, 1550
RsaNI	GTAC	2 cut(s)	928, 1549
RseI	CAYNNNNRTG	3 cut(s)	729, 939, 1561
SacI	GAGCTC	1 cut(s)	261
SapI	GCTCTTC	1 cut(s)	476
SaqAI	TTAA	4 cut(s)	371, 713, 1115, 1323
SatI	GCNGC	9 cut(s)	60, 249, 386, 528, 588, 619, 984, 1467, 1496
Sau3AI	GATC	9 cut(s)	772, 937, 1183, 1228, 1282, 1408, 1514, 1645, 1715
Sau96I	GGNCC	2 cut(s)	454, 1142
ScaI	AGTACT	1 cut(s)	929
SchI	GAGTC	2 cut(s)	1183, 1244
ScrFI	CCNGG	7 cut(s)	212, 253, 297, 298, 653, 1382, 1667
SduI	GDGCHC	5 cut(s)	218, 261, 297, 447, 1558
SfaNI	GCATC	8 cut(s)	70, 146, 385, 397, 655, 995, 1317, 1695
SfcI	CTRYAG	2 cut(s)	819, 1071
SgrAI	CRCCGGYG	1 cut(s)	188
SinI	GGWCC	2 cut(s)	454, 1142
SmaI	CCCGGG	1 cut(s)	298
SmiMI	CAYNNNNRTG	3 cut(s)	729, 939, 1561
SmlI	CTYRAG	3 cut(s)	534, 554, 1252
SmoI	CTYRAG	3 cut(s)	534, 554, 1252
SseBI	AGGCCT	1 cut(s)	1680
SspMI	CTAG	2 cut(s)	630, 980
SstI	GAGCTC	1 cut(s)	261
StuI	AGGCCT	1 cut(s)	1680
StyD4I	CCNGG	7 cut(s)	210, 251, 295, 296, 651, 1380, 1665
StyI	CCWWGG	1 cut(s)	1107
TaaI	ACNGT	2 cut(s)	1237, 1473
TaiI	ACGT	1 cut(s)	444
TaqI	TCGA	4 cut(s)	78, 243, 474, 1301
TatI	WGTACW	2 cut(s)	927, 1548
TauI	GCSGC	3 cut(s)	62, 251, 1498
TfiI	GAWTC	2 cut(s)	1198, 1257
Tru1I	TTAA	4 cut(s)	371, 713, 1115, 1323
Tru9I	TTAA	4 cut(s)	371, 713, 1115, 1323
TscAI	CASTG	1 cut(s)	601
TseFI	GTSAC	2 cut(s)	826, 1237
TseI	GCWGC	6 cut(s)	385, 527, 587, 618, 983, 1466
Tsp45I	GTSAC	2 cut(s)	826, 1237
TspDTI	ATGAA	4 cut(s)	987, 1146, 1227, 1236
TspGWI	ACGGA	1 cut(s)	741
TspMI	CCCGGG	1 cut(s)	296
TspRI	CASTG	1 cut(s)	601
VpaK11BI	GGWCC	2 cut(s)	454, 1142
XagI	CCTNNNNNAGG	1 cut(s)	338
XapI	RAATTY	3 cut(s)	1303, 1391, 1591
XbaI	TCTAGA	1 cut(s)	629
XceI	RCATGY	2 cut(s)	605, 1153
XcmI	CCANNNNNNNNNTGG	1 cut(s)	919
XmaI	CCCGGG	1 cut(s)	296
XspI	CTAG	2 cut(s)	630, 980
ZrmI	AGTACT	1 cut(s)	929

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.