Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000391.1

Orthogroup ID

OG0010228

Physical Location & Seq

Genomic Coordinates Reverse (-)

65232 .. 74468

Gene Structure 9237 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000391.1_g000018.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3189 bp

atggcgctcagagtttctccttcttctctactctgcagctgcaactgcaacgcaactccttcgcataacaatgccaactctctctcatcccacgcgctccatgcctcctacatccgacgcgccgtcgagctcgccggtaaatccgccggcttcacctctccccaccccaacttcggctgcgtcatcgccactccttccggcaaagtggccggcgagggcttcctctacgcccagggcaccaggcccgccgaggtcctcgcggtcgaggccgcgggacagctctcccgccaagccaccgcttatctgaacatggagcccggcgactgccacggcgaccactccgccgtctccgccctcgttcagggcggggttgaaagagtggtgattgggttgaggcatccactgcagcatctaagaggcaacgccataagggcattgagaagtcaaggcttgcaagttgaggtgctcggtgaggacctcaacagcaaactcatcgaggaagctcggaagtcgtgcctgctggctaatgctcctttaatttgtagagctgcttctcgagtgcccttctctgttctcaagtttgctatgacccttgatggaaaaattgctgcttccagtggacatgcatcatggattagcagcaagacatctagaaatcgagtttttgaactgcggggtacaagtgatgccatcattgtagggggaaacacagcacgcagggacaatccgaggctaactgcgaggcatggaggtgggcatatgcccatgcggattgtaatgacacagacacttgatctccctgaggaagcaaacctttgggacacctctgatgtttctactatagtcgtgacacaaaggggtgcgagaaggagtttccagaaatttcttgcatctaaaggaattgaagtcgtggagtttgacatcttaaaccccagagaagtaatggagtacttccatgatcgtggatatctttcaattttgtgggagtgtggagggacactatctgcggccgctatttcatctggagtaatacataaggtctttgcttttgttgctcctaagataattggtggaaaaaatgctccatcccctgtaggtgaacttgggatggttgaaatgacacaagccttggatttaattgatgtttgctatgaacaggttggacctgacatgcttgttagtggttttcttcaacccataccagatctgacgcctgttattccatcagttgatgaaacatatgaaattgatccaactgtcactccttatgaatcaagaatcatattcttttacaaaacatgggatccttatggcgctttctcaaatttctctcctcacccaattaagatgcttgatgttgatggtgattattccacttggatgagtgtagagcattactaccaggctcacaagtttgttggggtggatgatcctgtggcacgagattgtgttgaaaatatcaagtctgcaaaaagtccggaagaagcagcacgaataggacggtcaatgcagaggcagcacccttatttagtaagatccgactgggaaagtgtcaagattgatgtgatgtacagggcactaaaatgcaagttctcaatatacccacatttgaattctatgttgctgtcaactgctggatctgttctcgttgaagcttcaccgcatgatcttttctggggtggaggccgggatggagaaggcctaaattatttggggaggcttttgatgcagttgagatcagagtttcttggtgagtcccctacattaagtgagagctcatgcttagggttaaaggttaatacagatggtgctgctcgtgggacgctaggcctcgcaggctttggagctatatttcgtgatcacttgggcaattgtatgggttgtttgttggttctatgggaaaaaagagaaaagaagacccttgctcaaaatgatataaagttgcccccagggccaaggaagcttcctcttattgggaacttgcaccggttggcttgggttgctctgacagcaactgcggtgttgaagacgcctgcctttgctttcgcaggacagcctactgttcttgcaatagaactcacttcctataatcattcagttttcctagtcatcctaaatctattgaattggtattggaagaagactagtactagtagccatactagttctagtcttaggttgccaccagggccacggaagccaccagggccacgaaagctgcctcttattgggaacttgcatcagctggctttggttggctctttaccacatcatttcctgagagacttggccaacaagtatagtcctatgatgcatctcaagttgggacaagtgtctgccattgtcatttcatcaccagaattagccaatcaagtattgaaggtacatgaggcttctgctttctccaaccgacctacttttcttgctaaggaagttttgtcctataattgttcaggtatcatctctagtccttgtaatgattattggagagaaatgcgcaagatttgtgtattggagctcctaagtgcaaagcgtgtgcaggaaaagtctgcccttgatagaatacatctgaagatggacatgattcttgatgaaatcatcagtgatcataaactagtattcaagaaaaagagtaccattattgcagcaacagcagcagctggtgaagatcatctacaggaagatcaagatctagtggatgtgcttcttcaacttcaagagtctagtgacctccaattccaactcacaaccgaccatatcaaaggtgtcattatgaagaaaattcaagagacaaatattaagaaactagactacatgaagttggtaataaaagaaacactacgattgcaccctcctgttgccttaataccaagacaggcaaacaaaagatgcaaagtcagtggatatgatgtaccatctggagctagggtgttggtaaatgcttgggcaataggaagagacccgagacattggggcaccagtgctgattgctttgagcctgagaggtttcaaggttcttccattgattttaaagggtccgactttgaattcattccatttggagctggtaagagaatgtgtccaggcatcttatttggaactgctgctattgagattgcactttctcagttgctctactacttcaactggaactcccaaatgggaaaaacccacaagagcttaacatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004159 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016491 GO:0016627 GO:0016628 GO:0016787 GO:0016798 GO:0016799 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0055114 GO:0071704 GO:0090304 GO:1901135 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko00740 ko01100 ko01110 ko02024 map00740 map01100 map01110 map02024

Pfam Domains

Protein Families

DUF1768 RibD_C dCMP_cyt_deam_1

Protein Analysis

1062

Amino Acids

116.81

Weight (kDa)

8.72

Isoelectric Point (pI)

40.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010228)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47390 AT3G47390
fragaria_vesca	FvH4_6g00440 FvH4_6g00440
malus_domestica	MD04G1245400.v1.1 MD13G1061000.v1.1
prunus_persica	Prupe.6G362000_v2.0.a1
pyrus_communis	pycom04g21610 pycom06g10780 pycom12g23910
rosa_chinensis	RchiOBHm_Chr3g0447811
rosa_laevigata	RLG00000025969
rosa_multiflora	Rmu_co8480445.1_g000001 Rmu_ssc0000391.1_g000018
rosa_roxburghii	Rroxscaffold_6G00426010
rosa_rugosa	Rorug02G0605900
rosa_samantha	Rh3AG005400 Rh3BG005000 Rh3CG005300 Rh3DG005500
rosa_wichuraiana	Rw3G000400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2498
AccB1I	GGYRCC	2 cut(s)	236, 2975
AccII	CGCG	4 cut(s)	95, 120, 260, 272
AccIII	TCCGGA	1 cut(s)	1477
AclWI	GGATC	6 cut(s)	1244, 1298, 1311, 1424, 1530, 1645
AcoI	YGGCCR	3 cut(s)	207, 1008, 2289
AcsI	RAATTY	5 cut(s)	881, 1324, 1612, 2781, 3047
AcuI	CTGAAG	1 cut(s)	2591
AcyI	GRCGYC	2 cut(s)	1211, 2030
AfaI	GTAC	7 cut(s)	679, 950, 1571, 2149, 2385, 2635, 2913
AfiI	CCNNNNNNNGG	4 cut(s)	173, 361, 1973, 2228
AgeI	ACCGGT	1 cut(s)	1986
AhdI	GACNNNNNGTC	1 cut(s)	122
AhlI	ACTAGT	4 cut(s)	2144, 2150, 2162, 2614
AjnI	CCWGG	7 cut(s)	231, 239, 1401, 1948, 2185, 2203, 3082
Alw21I	GWGCWC	4 cut(s)	132, 468, 1778, 2520
Alw26I	GTCTC	5 cut(s)	352, 2277, 2783, 2952, 2959
AlwI	GGATC	6 cut(s)	1244, 1298, 1311, 1424, 1530, 1645
AlwNI	CAGNNNCTG	2 cut(s)	2015, 2660
Ama87I	CYCGRG	2 cut(s)	555, 2962
Aor13HI	TCCGGA	1 cut(s)	1477
ApoI	RAATTY	5 cut(s)	881, 1324, 1612, 2781, 3047
AsiGI	ACCGGT	1 cut(s)	1986
Asp700I	GAANNNNTTC	1 cut(s)	3051
AspLEI	GCGC	5 cut(s)	7, 97, 122, 1316, 2499
AspS9I	GGNCC	8 cut(s)	243, 253, 475, 1163, 1952, 2189, 2207, 3036
AsuC2I	CCSGG	2 cut(s)	318, 1688
AvaI	CYCGRG	2 cut(s)	555, 2962
AvaII	GGWCC	4 cut(s)	253, 475, 1163, 3036
AxyI	CCTNAGG	1 cut(s)	801
BaeGI	GKGCMC	4 cut(s)	239, 564, 1579, 2978
BalI	TGGCCA	1 cut(s)	2291
BamHI	GGATCC	1 cut(s)	1303
BanI	GGYRCC	2 cut(s)	236, 2975
BanII	GRGCYC	4 cut(s)	132, 318, 1778, 2520
BarI	GAAGNNNNNNTAC	4 cut(s)	535, 567, 2658, 2690
BauI	CACGAG	2 cut(s)	1440, 1815
BbsI	GAAGAC	3 cut(s)	1922, 2033, 2147
Bbv12I	GWGCWC	4 cut(s)	132, 468, 1778, 2520
BceAI	ACGGC	3 cut(s)	107, 329, 346
BcgI	CGANNNNNNTGC	4 cut(s)	42, 76, 475, 509
BciT130I	CCWGG	7 cut(s)	233, 241, 1403, 1950, 2187, 2205, 3084
BclI	TGATCA	2 cut(s)	1858, 2605
BcnI	CCSGG	2 cut(s)	318, 1688
BcoDI	GTCTC	5 cut(s)	352, 2277, 2783, 2952, 2959
BcuI	ACTAGT	4 cut(s)	2144, 2150, 2162, 2614
BfmI	CTRYAG	5 cut(s)	34, 404, 840, 1092, 2675
BfoI	RGCGCY	2 cut(s)	8, 1317
BglI	GCCNNNNNGGC	5 cut(s)	431, 1836, 1951, 2188, 2206
BglII	AGATCT	2 cut(s)	1204, 2689
BmcAI	AGTACT	2 cut(s)	950, 2149
Bme1390I	CCNGG	9 cut(s)	233, 241, 318, 1403, 1688, 1950, 2187, 2205, 3084
Bme18I	GGWCC	4 cut(s)	253, 475, 1163, 3036
BmeRI	GACNNNNNGTC	1 cut(s)	122
BmeT110I	CYCGRG	2 cut(s)	555, 2962
BmgT120I	GGNCC	8 cut(s)	243, 253, 475, 1163, 1952, 2189, 2207, 3036
BmiI	GGNNCC	5 cut(s)	238, 315, 1305, 2977, 3037
BmrFI	CCNGG	9 cut(s)	233, 241, 318, 1403, 1688, 1950, 2187, 2205, 3084
BmrI	ACTGGG	1 cut(s)	1552
BmuI	ACTGGG	1 cut(s)	1552
BoxI	GACNNNNGTC	1 cut(s)	2332
BpiI	GAAGAC	3 cut(s)	1922, 2033, 2147
BpmI	CTGGAG	2 cut(s)	1044, 2940
Bpu10I	CCTNAGC	2 cut(s)	1783, 2427
BpuEI	CTTGAG	2 cut(s)	560, 2303
BpuMI	CCSGG	2 cut(s)	318, 1688
BsaBI	GATNNNNATC	1 cut(s)	2688
BsaHI	GRCGYC	2 cut(s)	1211, 2030
BsaI	GGTCTC	1 cut(s)	2952
BsaWI	WCCGGW	2 cut(s)	1477, 1986
BsaXI	ACNNNNNCTCC	8 cut(s)	780, 810, 1246, 1276, 2913, 2943, 3137, 3167
Bsc4I	CCNNNNNNNGG	4 cut(s)	173, 361, 1973, 2228
Bse118I	RCCGGY	4 cut(s)	134, 146, 209, 1986
Bse1I	ACTGG	4 cut(s)	615, 1547, 2979, 3152
Bse21I	CCTNAGG	1 cut(s)	801
Bse8I	GATNNNNATC	1 cut(s)	2688
BseAI	TCCGGA	1 cut(s)	1477
BseBI	CCWGG	7 cut(s)	233, 241, 1403, 1950, 2187, 2205, 3084
BseJI	GATNNNNATC	1 cut(s)	2688
BseLI	CCNNNNNNNGG	4 cut(s)	173, 361, 1973, 2228
BseMII	CTCAG	5 cut(s)	22, 792, 2270, 2991, 3140
BseNI	ACTGG	4 cut(s)	615, 1547, 2979, 3152
BseRI	GAGGAG	1 cut(s)	1323
BseSI	GKGCMC	4 cut(s)	239, 564, 1579, 2978
BseX3I	CGGCCG	1 cut(s)	1008
BsgI	GTGCAG	1 cut(s)	2558
Bsh1236I	CGCG	4 cut(s)	95, 120, 260, 272
Bsh1285I	CGRYCG	2 cut(s)	264, 1011
BshNI	GGYRCC	2 cut(s)	236, 2975
BshTI	ACCGGT	1 cut(s)	1986
BsiEI	CGRYCG	2 cut(s)	264, 1011
BsiHKAI	GWGCWC	4 cut(s)	132, 468, 1778, 2520
BsiHKCI	CYCGRG	2 cut(s)	555, 2962
BsiSI	CCGG	8 cut(s)	135, 147, 198, 210, 318, 1478, 1687, 1987
BslFI	GGGAC	7 cut(s)	288, 734, 833, 1009, 1741, 1834, 2340
BslI	CCNNNNNNNGG	4 cut(s)	173, 361, 1973, 2228
BsmAI	GTCTC	5 cut(s)	352, 2277, 2783, 2952, 2959
BsmBI	CGTCTC	1 cut(s)	352
BsmFI	GGGAC	7 cut(s)	288, 734, 833, 1009, 1741, 1834, 2340
Bso31I	GGTCTC	1 cut(s)	2952
BsoBI	CYCGRG	2 cut(s)	555, 2962
Bsp1286I	GDGCHC	9 cut(s)	132, 239, 318, 468, 564, 1579, 1778, 2520, 2978
Bsp13I	TCCGGA	1 cut(s)	1477
Bsp1407I	TGTACA	1 cut(s)	1569
BspCNI	CTCAG	5 cut(s)	21, 793, 2271, 2992, 3139
BspEI	TCCGGA	1 cut(s)	1477
BspFNI	CGCG	4 cut(s)	95, 120, 260, 272
BspLI	GGNNCC	5 cut(s)	238, 315, 1305, 2977, 3037
BspMAI	CTGCAG	2 cut(s)	38, 408
BspPI	GGATC	6 cut(s)	1244, 1298, 1311, 1424, 1530, 1645
BspT107I	GGYRCC	2 cut(s)	236, 2975
BspTNI	GGTCTC	1 cut(s)	2952
BsrFI	RCCGGY	4 cut(s)	134, 146, 209, 1986
BsrGI	TGTACA	1 cut(s)	1569
BsrI	ACTGG	4 cut(s)	615, 1547, 2979, 3152
BssAI	RCCGGY	4 cut(s)	134, 146, 209, 1986
BssNI	GRCGYC	2 cut(s)	1211, 2030
BssSI	CACGAG	2 cut(s)	1440, 1815
BssT1I	CCWWGG	2 cut(s)	1128, 1955
Bst2BI	CACGAG	2 cut(s)	1440, 1815
Bst2UI	CCWGG	7 cut(s)	233, 241, 1403, 1950, 2187, 2205, 3084
Bst4CI	ACNGT	3 cut(s)	1258, 1503, 2062
Bst6I	CTCTTC	1 cut(s)	2950
BstACI	GRCGYC	2 cut(s)	1211, 2030
BstAPI	GCANNNNNTGC	1 cut(s)	403
BstAUI	TGTACA	1 cut(s)	1569
BstDSI	CCRYGG	3 cut(s)	270, 328, 2192
BstENI	CCTNNNNNAGG	1 cut(s)	359
BstFNI	CGCG	4 cut(s)	95, 120, 260, 272
BstH2I	RGCGCY	2 cut(s)	8, 1317
BstHHI	GCGC	5 cut(s)	7, 97, 122, 1316, 2499
BstMAI	GTCTC	5 cut(s)	352, 2277, 2783, 2952, 2959
BstMCI	CGRYCG	2 cut(s)	264, 1011
BstNI	CCWGG	7 cut(s)	233, 241, 1403, 1950, 2187, 2205, 3084
BstNSI	RCATGY	2 cut(s)	626, 1174
BstPAI	GACNNNNGTC	1 cut(s)	2332
BstSCI	CCNGG	9 cut(s)	231, 239, 316, 1401, 1686, 1948, 2185, 2203, 3082
BstSFI	CTRYAG	5 cut(s)	34, 404, 840, 1092, 2675
BstSLI	GKGCMC	4 cut(s)	239, 564, 1579, 2978
BstUI	CGCG	4 cut(s)	95, 120, 260, 272
BstV2I	GAAGAC	3 cut(s)	1922, 2033, 2147
BstX2I	RGATCY	5 cut(s)	1204, 1303, 1535, 1637, 2689
BstXI	CCANNNNNNTGG	1 cut(s)	962
BstYI	RGATCY	5 cut(s)	1204, 1303, 1535, 1637, 2689
BstZI	CGGCCG	1 cut(s)	1008
Bsu36I	CCTNAGG	1 cut(s)	801
BtgI	CCRYGG	3 cut(s)	270, 328, 2192
BtgZI	GCGATG	1 cut(s)	169
BtsI	GCAGTG	1 cut(s)	401
BtsIMutI	CAGTG	5 cut(s)	401, 622, 2608, 2905, 2986
CaiI	CAGNNNCTG	2 cut(s)	2015, 2660
CciNI	GCGGCCGC	1 cut(s)	1008
CfoI	GCGC	5 cut(s)	7, 97, 122, 1316, 2499
Cfr10I	RCCGGY	4 cut(s)	134, 146, 209, 1986
Cfr13I	GGNCC	8 cut(s)	243, 253, 475, 1163, 1952, 2189, 2207, 3036
Cfr42I	CCGCGG	1 cut(s)	273
CseI	GACGC	5 cut(s)	126, 169, 1219, 1831, 2038
Csp6I	GTAC	7 cut(s)	678, 949, 1570, 2148, 2384, 2634, 2912
CspAI	ACCGGT	1 cut(s)	1986
CspCI	CAANNNNNGTGG	2 cut(s)	2881, 2916
CviQI	GTAC	7 cut(s)	678, 949, 1570, 2148, 2384, 2634, 2912
DraI	TTTAAA	1 cut(s)	3031
DriI	GACNNNNNGTC	1 cut(s)	122
EaeI	YGGCCR	3 cut(s)	207, 1008, 2289
EagI	CGGCCG	1 cut(s)	1008
Eam1104I	CTCTTC	1 cut(s)	2950
Eam1105I	GACNNNNNGTC	1 cut(s)	122
EarI	CTCTTC	1 cut(s)	2950
EciI	GGCGGA	3 cut(s)	133, 331, 340
Ecl136II	GAGCTC	3 cut(s)	130, 1776, 2518
EclXI	CGGCCG	1 cut(s)	1008
Eco130I	CCWWGG	2 cut(s)	1128, 1955
Eco147I	AGGCCT	2 cut(s)	1701, 1830
Eco24I	GRGCYC	4 cut(s)	132, 318, 1778, 2520
Eco31I	GGTCTC	1 cut(s)	2952
Eco32I	GATATC	1 cut(s)	968
Eco47I	GGWCC	4 cut(s)	253, 475, 1163, 3036
Eco52I	CGGCCG	1 cut(s)	1008
Eco53kI	GAGCTC	3 cut(s)	130, 1776, 2518
Eco57I	CTGAAG	1 cut(s)	2591
Eco81I	CCTNAGG	1 cut(s)	801
Eco88I	CYCGRG	2 cut(s)	555, 2962
EcoICRI	GAGCTC	3 cut(s)	130, 1776, 2518
EcoNI	CCTNNNNNAGG	1 cut(s)	359
EcoO109I	RGGNCCY	2 cut(s)	253, 475
EcoRI	GAATTC	2 cut(s)	1612, 3047
EcoRII	CCWGG	7 cut(s)	231, 239, 1401, 1948, 2185, 2203, 3082
EcoRV	GATATC	1 cut(s)	968
EcoT14I	CCWWGG	2 cut(s)	1128, 1955
EcoT22I	ATGCAT	2 cut(s)	628, 2316
EcoT38I	GRGCYC	4 cut(s)	132, 318, 1778, 2520
ErhI	CCWWGG	2 cut(s)	1128, 1955
Esp3I	CGTCTC	1 cut(s)	352
FalI	AAGNNNNNCTT	2 cut(s)	798, 830
FaqI	GGGAC	7 cut(s)	288, 734, 833, 1009, 1741, 1834, 2340
FauI	CCCGC	5 cut(s)	253, 265, 293, 359, 666
FauNDI	CATATG	2 cut(s)	759, 1240
FbaI	TGATCA	2 cut(s)	1858, 2605
FriOI	GRGCYC	4 cut(s)	132, 318, 1778, 2520
FspI	TGCGCA	1 cut(s)	2498
GlaI	GCGC	5 cut(s)	6, 96, 121, 1315, 2498
GsuI	CTGGAG	2 cut(s)	1044, 2940
HaeII	RGCGCY	2 cut(s)	8, 1317
HapII	CCGG	8 cut(s)	135, 147, 198, 210, 318, 1478, 1687, 1987
HgaI	GACGC	5 cut(s)	126, 169, 1219, 1831, 2038
HhaI	GCGC	5 cut(s)	7, 97, 122, 1316, 2499
Hin1I	GRCGYC	2 cut(s)	1211, 2030
Hin6I	GCGC	5 cut(s)	5, 95, 120, 1314, 2497
HinP1I	GCGC	5 cut(s)	5, 95, 120, 1314, 2497
HincII	GTYRAC	1 cut(s)	1629
HindII	GTYRAC	1 cut(s)	1629
HindIII	AAGCTT	2 cut(s)	1653, 1961
HinfI	GANTC	5 cut(s)	1271, 1278, 1754, 2584, 2720
HpaII	CCGG	8 cut(s)	135, 147, 198, 210, 318, 1478, 1687, 1987
Hpy166II	GTNNAC	3 cut(s)	620, 1100, 1629
Hpy8I	GTNNAC	3 cut(s)	620, 1100, 1629
Hpy99I	CGWCG	2 cut(s)	120, 128
HpyAV	CCTTC	7 cut(s)	30, 69, 204, 574, 861, 1691, 2374
HpyCH4III	ACNGT	3 cut(s)	1258, 1503, 2062
Hsp92I	GRCGYC	2 cut(s)	1211, 2030
HspAI	GCGC	5 cut(s)	5, 95, 120, 1314, 2497
Kpn2I	TCCGGA	1 cut(s)	1477
KroI	GCCGGC	2 cut(s)	146, 209
KroNI	GCCGGC	2 cut(s)	148, 211
Ksp22I	TGATCA	2 cut(s)	1858, 2605
KspI	CCGCGG	1 cut(s)	273
MaeIII	GTNAC	3 cut(s)	847, 1258, 2726
MfeI	CAATTG	1 cut(s)	1870
MflI	RGATCY	5 cut(s)	1204, 1303, 1535, 1637, 2689
MhlI	GDGCHC	9 cut(s)	132, 239, 318, 468, 564, 1579, 1778, 2520, 2978
MlsI	TGGCCA	1 cut(s)	2291
MluNI	TGGCCA	1 cut(s)	2291
MlyI	GAGTC	2 cut(s)	1763, 2729
MmeI	TCCRAC	7 cut(s)	139, 1141, 1277, 1563, 2430, 2764, 3063
Mox20I	TGGCCA	1 cut(s)	2291
Mph1103I	ATGCAT	2 cut(s)	628, 2316
MroI	TCCGGA	1 cut(s)	1477
MroNI	GCCGGC	2 cut(s)	146, 209
MroXI	GAANNNNTTC	1 cut(s)	3051
MscI	TGGCCA	1 cut(s)	2291
MslI	CAYNNNNRTG	5 cut(s)	69, 750, 960, 1379, 1582
Msp20I	TGGCCA	1 cut(s)	2291
MspA1I	CMGCKG	4 cut(s)	39, 272, 2245, 2660
MspI	CCGG	8 cut(s)	135, 147, 198, 210, 318, 1478, 1687, 1987
MspR9I	CCNGG	9 cut(s)	233, 241, 318, 1403, 1688, 1950, 2187, 2205, 3084
MunI	CAATTG	1 cut(s)	1870
MvaI	CCWGG	7 cut(s)	233, 241, 1403, 1950, 2187, 2205, 3084
MvnI	CGCG	4 cut(s)	95, 120, 260, 272
NaeI	GCCGGC	2 cut(s)	148, 211
NciI	CCSGG	2 cut(s)	318, 1688
NdeI	CATATG	2 cut(s)	759, 1240
NgoMIV	GCCGGC	2 cut(s)	146, 209
NlaIV	GGNNCC	5 cut(s)	238, 315, 1305, 2977, 3037
NmeAIII	GCCGAG	1 cut(s)	274
NmuCI	GTSAC	3 cut(s)	847, 1258, 2726
NotI	GCGGCCGC	1 cut(s)	1008
NsbI	TGCGCA	1 cut(s)	2498
NsiI	ATGCAT	2 cut(s)	628, 2316
NspI	RCATGY	2 cut(s)	626, 1174
PaeR7I	CTCGAG	1 cut(s)	555
PasI	CCCWGGG	2 cut(s)	232, 1949
PceI	AGGCCT	2 cut(s)	1701, 1830
PdiI	GCCGGC	2 cut(s)	148, 211
PdmI	GAANNNNTTC	1 cut(s)	3051
PfeI	GAWTC	3 cut(s)	1271, 1278, 2584
PinAI	ACCGGT	1 cut(s)	1986
PleI	GAGTC	2 cut(s)	1762, 2728
PpsI	GAGTC	2 cut(s)	1762, 2728
PpuMI	RGGWCCY	2 cut(s)	253, 475
PshAI	GACNNNNGTC	1 cut(s)	2332
Psp124BI	GAGCTC	3 cut(s)	132, 1778, 2520
Psp5II	RGGWCCY	2 cut(s)	253, 475
Psp6I	CCWGG	7 cut(s)	231, 239, 1401, 1948, 2185, 2203, 3082
PspGI	CCWGG	7 cut(s)	231, 239, 1401, 1948, 2185, 2203, 3082
PspN4I	GGNNCC	5 cut(s)	238, 315, 1305, 2977, 3037
PspPI	GGNCC	8 cut(s)	243, 253, 475, 1163, 1952, 2189, 2207, 3036
PspPPI	RGGWCCY	2 cut(s)	253, 475
PstI	CTGCAG	2 cut(s)	38, 408
PstNI	CAGNNNCTG	2 cut(s)	2015, 2660
PsuI	RGATCY	5 cut(s)	1204, 1303, 1535, 1637, 2689
PvuII	CAGCTG	3 cut(s)	39, 2245, 2660
RsaI	GTAC	7 cut(s)	679, 950, 1571, 2149, 2385, 2635, 2913
RsaNI	GTAC	7 cut(s)	678, 949, 1570, 2148, 2384, 2634, 2912
RseI	CAYNNNNRTG	5 cut(s)	69, 750, 960, 1379, 1582
SacI	GAGCTC	3 cut(s)	132, 1778, 2520
SacII	CCGCGG	1 cut(s)	273
Sau96I	GGNCC	8 cut(s)	243, 253, 475, 1163, 1952, 2189, 2207, 3036
ScaI	AGTACT	2 cut(s)	950, 2149
SchI	GAGTC	2 cut(s)	1763, 2729
ScrFI	CCNGG	9 cut(s)	233, 241, 318, 1403, 1688, 1950, 2187, 2205, 3084
SduI	GDGCHC	9 cut(s)	132, 239, 318, 468, 564, 1579, 1778, 2520, 2978
SfcI	CTRYAG	5 cut(s)	34, 404, 840, 1092, 2675
Sfr274I	CTCGAG	1 cut(s)	555
Sfr303I	CCGCGG	1 cut(s)	273
SgrBI	CCGCGG	1 cut(s)	273
SinI	GGWCC	4 cut(s)	253, 475, 1163, 3036
SlaI	CTCGAG	1 cut(s)	555
SmiMI	CAYNNNNRTG	5 cut(s)	69, 750, 960, 1379, 1582
SmlI	CTYRAG	3 cut(s)	555, 575, 2318
SmoI	CTYRAG	3 cut(s)	555, 575, 2318
SpeI	ACTAGT	4 cut(s)	2144, 2150, 2162, 2614
SseBI	AGGCCT	2 cut(s)	1701, 1830
SspI	AATATT	1 cut(s)	2797
SstI	GAGCTC	3 cut(s)	132, 1778, 2520
StuI	AGGCCT	2 cut(s)	1701, 1830
StyD4I	CCNGG	9 cut(s)	231, 239, 316, 1401, 1686, 1948, 2185, 2203, 3082
StyI	CCWWGG	2 cut(s)	1128, 1955
TaaI	ACNGT	3 cut(s)	1258, 1503, 2062
TaqI	TCGA	5 cut(s)	126, 264, 495, 556, 658
TatI	WGTACW	3 cut(s)	948, 1569, 2147
TauI	GCSGC	3 cut(s)	272, 1010, 1013
TfiI	GAWTC	3 cut(s)	1271, 1278, 2584
TscAI	CASTG	5 cut(s)	408, 622, 2608, 2905, 2986
TseFI	GTSAC	3 cut(s)	847, 1258, 2726
Tsp45I	GTSAC	3 cut(s)	847, 1258, 2726
TspGWI	ACGGA	1 cut(s)	2209
TspRI	CASTG	5 cut(s)	408, 622, 2608, 2905, 2986
VpaK11BI	GGWCC	4 cut(s)	253, 475, 1163, 3036
XagI	CCTNNNNNAGG	1 cut(s)	359
XapI	RAATTY	5 cut(s)	881, 1324, 1612, 2781, 3047
XbaI	TCTAGA	1 cut(s)	650
XceI	RCATGY	2 cut(s)	626, 1174
XcmI	CCANNNNNNNNNTGG	1 cut(s)	940
XhoI	CTCGAG	1 cut(s)	555
XmnI	GAANNNNTTC	1 cut(s)	3051
ZrmI	AGTACT	2 cut(s)	950, 2149
Zsp2I	ATGCAT	2 cut(s)	628, 2316

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.