Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0010228

Physical Location & Seq

Genomic Coordinates Forward (+)

4285135 .. 4289349

Gene Structure 4215 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1061000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGTGGTATGATGCTTTTGGTTTTATTGCTCGCTCGCTGATGCAGATGATTTTCGCGCACTTATTTTTTTCTATCGTCTATGATCTATCTATGCTTCCAATGGCGGCGTTATCTTTGCCACCAGTGAGAGTCTACTGCAGCGGCGGCGCCGCCACACCCAACAGCAGTATTAGTAACAACAATTTACTCGGCAACCACGCGCTCGATGCCGCCCACATCCGACGAGCCGCCGAGCTGGCCGACGGATCCGCCGGATTCACCTCTCCCCACCCAAACTTCGGGTGCGTCATTGCCTCCAAATCCGGGAAAGTCGCCGGCGAGGGATTCCTCTACGCCCAGGGCACCAAGCCCGCCGAGGTCCTTGCCGTCGACGCAGCTGGCGATTTCTCACGCCGCGCCACTGCTTATCTCAACATGGAGCCCGGTGATTGCCACGGTGACCACTCTGCCGTCTCCGCCCTCGTTCAGGCAGGGATTGAAAGGGTGGTGATTGGGCTGAGGCATCCATTGCAGCATTTGAGAGGGAATGCCATTCGGGCTTTGAGAAGTCAAGGCTTGCAAGTTGATGTTCTTGGTGAGGACCTCAACAGTAAACTCATTGAGGAAGCACGAAAATCATGCCTCCTTGTCAATGCTCCATTAATTTGTAGAGCTGCTTCTCGAGTCCCCTTCTCCGTTCTCAAGTATGCCATGACTCTTGATGGAAAAATTGCTGCTAGCAGCGGACATGCAGCATGGATCAGCAGCAAAACGTCTAGAAATCGAGTGTTTGAACTGCGGGGTAGAAGTGATGCAGTCATTGTAGGAGGAAATACAGTGCGCAAGGACAATCCAAGACTAACTGCAAGACATGGTGGTGGACATATGCCTATGCGGATTGTAATGTCACAGACTCTTGATCTCCCAGAGGAAGCACACCTTTGGGATACCTCTGATGTATCTACTATAGTTGCAACACAGAGGGGTGCAAGAAGGCATTTCCAGAAACATCTTGCATCAAAAGGAATTGAAGTGGTGGAGTTTGACATCTTAAACCCCAGAGAAGTAATGGAATACTTCCATGATCGTGGATATCTTTCACTTTTGTGGGAGTGTGGGGGGACATTAGCTGCAGCTGCTATTTCATCCGGAGTAATACATAAGGTGTTCGCATTTGTTGCTCCTAAAATTATTGGTGGAAAGAATGCGCCATCCCCTGTGGGTGAACTCGGGATGGTTGAAATGACACAAGCCTTTGACCTAATTGATGTCTGCTATGAACAGGTTGGACCTGATATGCTTATAAGTGGATTTCTTCAACCCATACCAGATGTGACCCCTGTTATTCCATCAGTTGATGAAACATTTGAAATTGATCCAACCGTGACTCCATATGAATCAAGGATCATATTCTTTTACAAAACATGGGACCCATACGGCGCTTTCTCAAATTTTTCGCCTCACCAAATTAAGATGCCAGATGACAGTGGTGATTATGAACCTTGGTTGAGTGTCGAGCATTACTATCAGGCTCAGAAGTTTGTTGGGGTGGATGATCCTGTGGCACAAGATTGTGTTGAAAATATCAAGTCTGCCAGAAGTCCGGAAGAGGCAGCACGGATAGGAAGGTCAATGCAGAGGAAGCGTCCTGATTTGGTAAGATGTGAGTGGGAAAGTGTAAAGATTGAAGTGATGTATAGGGCACTAAAATGCAAGTTCTCGATATACCCACATTTGAATGCAATGTTGCTGTCAAGTGCTGGATGTGTTCTTGTTGAAGCATCACCGCATGATCTTTTCTGGGGAGGAGGTCGGGATGGAGAAGGGCTAAATTATCTGGGCAGGCTTTTAATGCAGTTGAGATCAGAGTTTCTTGGTGAGTCTCCTACGTCCAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004159 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016491 GO:0016627 GO:0016628 GO:0016787 GO:0016798 GO:0016799 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0055114 GO:0071704 GO:0090304 GO:1901135 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko00740 ko01100 ko01110 ko02024 map00740 map01100 map01110 map02024

Pfam Domains

Protein Families

DUF1768 RibD_C dCMP_cyt_deam_1

Protein Analysis

626

Amino Acids

68.45

Weight (kDa)

6.22

Isoelectric Point (pI)

43.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RibD_C	PF01872	224 - 427	2e-42	RibD C-terminal domain
NADAR	PF08719	464 - 617	5.3e-33	NADAR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010228)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47390 AT3G47390
fragaria_vesca	FvH4_6g00440 FvH4_6g00440
malus_domestica	MD04G1245400.v1.1 MD13G1061000.v1.1
prunus_persica	Prupe.6G362000_v2.0.a1
pyrus_communis	pycom04g21610 pycom06g10780 pycom12g23910
rosa_chinensis	RchiOBHm_Chr3g0447811
rosa_laevigata	RLG00000025969
rosa_multiflora	Rmu_co8480445.1_g000001 Rmu_ssc0000391.1_g000018
rosa_roxburghii	Rroxscaffold_6G00426010
rosa_rugosa	Rorug02G0605900
rosa_samantha	Rh3AG005400 Rh3BG005000 Rh3CG005300 Rh3DG005500
rosa_wichuraiana	Rw3G000400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1283
Acc16I	TGCGCA	1 cut(s)	821
AccB1I	GGYRCC	2 cut(s)	146, 341
AccI	GTMKAC	2 cut(s)	132, 369
AccII	CGCG	3 cut(s)	56, 200, 396
AccIII	TCCGGA	2 cut(s)	1127, 1582
AclWI	GGATC	6 cut(s)	240, 253, 746, 1349, 1391, 1529
AcoI	YGGCCR	1 cut(s)	237
AcsI	RAATTY	1 cut(s)	1429
AcyI	GRCGYC	1 cut(s)	147
AfiI	CCNNNNNNNGG	3 cut(s)	278, 303, 466
AjnI	CCWGG	1 cut(s)	336
AleI	CACNNNNGTG	1 cut(s)	1084
AluBI	AGCT	5 cut(s)	235, 377, 653, 1109, 1115
AluI	AGCT	5 cut(s)	235, 377, 653, 1109, 1115
Alw26I	GTCTC	2 cut(s)	457, 1866
AlwI	GGATC	6 cut(s)	240, 253, 746, 1349, 1391, 1529
Ama87I	CYCGRG	2 cut(s)	660, 1208
Aor13HI	TCCGGA	2 cut(s)	1127, 1582
AoxI	GGCC	1 cut(s)	237
ApoI	RAATTY	1 cut(s)	1429
AseI	ATTAAT	1 cut(s)	641
AspLEI	GCGC	7 cut(s)	58, 149, 202, 398, 822, 1189, 1421
AspS9I	GGNCC	4 cut(s)	358, 580, 1268, 1408
AsuC2I	CCSGG	2 cut(s)	304, 423
AsuNHI	GCTAGC	1 cut(s)	716
AvaI	CYCGRG	2 cut(s)	660, 1208
AvaII	GGWCC	4 cut(s)	358, 580, 1268, 1408
BaeGI	GKGCMC	2 cut(s)	344, 1684
BamHI	GGATCC	1 cut(s)	245
BanI	GGYRCC	2 cut(s)	146, 341
BanII	GRGCYC	1 cut(s)	423
BarI	GAAGNNNNNNTAC	2 cut(s)	640, 672
BbvCI	CCTCAGC	1 cut(s)	497
BccI	CCATC	5 cut(s)	695, 1198, 1207, 1336, 1790
BceAI	ACGGC	3 cut(s)	350, 434, 1432
BcgI	CGANNNNNNTGC	4 cut(s)	344, 378, 600, 634
BciT130I	CCWGG	1 cut(s)	338
BciVI	GTATCC	1 cut(s)	919
BcnI	CCSGG	2 cut(s)	304, 423
BcoDI	GTCTC	2 cut(s)	457, 1866
BfaI	CTAG	2 cut(s)	717, 756
BfmI	CTRYAG	3 cut(s)	136, 945, 1110
BfoI	RGCGCY	2 cut(s)	150, 1422
BfuI	GTATCC	1 cut(s)	919
BglI	GCCNNNNNGGC	2 cut(s)	236, 536
Bme1390I	CCNGG	3 cut(s)	304, 338, 423
Bme18I	GGWCC	4 cut(s)	358, 580, 1268, 1408
BmeT110I	CYCGRG	2 cut(s)	660, 1208
BmgT120I	GGNCC	4 cut(s)	358, 580, 1268, 1408
BmiI	GGNNCC	6 cut(s)	148, 247, 343, 420, 1409, 1410
BmrFI	CCNGG	3 cut(s)	304, 338, 423
BmsI	GCATC	7 cut(s)	30, 196, 511, 781, 1004, 1443, 1769
BmtI	GCTAGC	1 cut(s)	720
Bpu10I	CCTNAGC	1 cut(s)	497
BpuEI	CTTGAG	1 cut(s)	665
BpuMI	CCSGG	2 cut(s)	304, 423
BsaHI	GRCGYC	1 cut(s)	147
BsaJI	CCNNGG	5 cut(s)	336, 337, 354, 433, 1481
BsaWI	WCCGGW	2 cut(s)	1127, 1582
BsaXI	ACNNNNNCTCC	2 cut(s)	1351, 1381
Bsc4I	CCNNNNNNNGG	3 cut(s)	278, 303, 466
Bse118I	RCCGGY	1 cut(s)	314
Bse1I	ACTGG	2 cut(s)	122, 1872
Bse3DI	GCAATG	3 cut(s)	288, 506, 1728
BseAI	TCCGGA	2 cut(s)	1127, 1582
BseBI	CCWGG	1 cut(s)	338
BseDI	CCNNGG	5 cut(s)	336, 337, 354, 433, 1481
BseGI	GGATG	8 cut(s)	216, 502, 1124, 1190, 1218, 1537, 1748, 1801
BseLI	CCNNNNNNNGG	3 cut(s)	278, 303, 466
BseMI	GCAATG	3 cut(s)	288, 506, 1728
BseMII	CTCAG	2 cut(s)	488, 1526
BseNI	ACTGG	2 cut(s)	122, 1872
BseRI	GAGGAG	1 cut(s)	1800
BseSI	GKGCMC	2 cut(s)	344, 1684
Bsh1236I	CGCG	3 cut(s)	56, 200, 396
BshFI	GGCC	1 cut(s)	239
BshNI	GGYRCC	2 cut(s)	146, 341
BsiHKCI	CYCGRG	2 cut(s)	660, 1208
BsiSI	CCGG	6 cut(s)	252, 303, 315, 423, 1128, 1583
BslFI	GGGAC	3 cut(s)	650, 1114, 1421
BslI	CCNNNNNNNGG	3 cut(s)	278, 303, 466
BsmAI	GTCTC	2 cut(s)	457, 1866
BsmBI	CGTCTC	1 cut(s)	457
BsmFI	GGGAC	3 cut(s)	650, 1114, 1421
BsmI	GAATGC	3 cut(s)	532, 1189, 1723
BsnI	GGCC	1 cut(s)	239
BsoBI	CYCGRG	2 cut(s)	660, 1208
Bsp1286I	GDGCHC	3 cut(s)	344, 423, 1684
Bsp13I	TCCGGA	2 cut(s)	1127, 1582
BspANI	GGCC	1 cut(s)	239
BspCNI	CTCAG	2 cut(s)	489, 1525
BspEI	TCCGGA	2 cut(s)	1127, 1582
BspFNI	CGCG	3 cut(s)	56, 200, 396
BspLI	GGNNCC	6 cut(s)	148, 247, 343, 420, 1409, 1410
BspMAI	CTGCAG	2 cut(s)	140, 1114
BspOI	GCTAGC	1 cut(s)	720
BspPI	GGATC	6 cut(s)	240, 253, 746, 1349, 1391, 1529
BspT107I	GGYRCC	2 cut(s)	146, 341
BsrDI	GCAATG	3 cut(s)	288, 506, 1728
BsrFI	RCCGGY	1 cut(s)	314
BsrI	ACTGG	2 cut(s)	122, 1872
BssAI	RCCGGY	1 cut(s)	314
BssECI	CCNNGG	5 cut(s)	336, 337, 354, 433, 1481
BssNI	GRCGYC	1 cut(s)	147
BssT1I	CCWWGG	1 cut(s)	1481
Bst2UI	CCWGG	1 cut(s)	338
Bst4CI	ACNGT	5 cut(s)	437, 590, 817, 1363, 1466
Bst6I	CTCTTC	1 cut(s)	1581
BstACI	GRCGYC	1 cut(s)	147
BstAPI	GCANNNNNTGC	2 cut(s)	508, 1157
BstC8I	GCNNGC	9 cut(s)	31, 35, 237, 316, 351, 379, 557, 718, 1823
BstDEI	CTNAG	2 cut(s)	497, 1512
BstDSI	CCRYGG	1 cut(s)	433
BstEII	GGTNACC	1 cut(s)	437
BstENI	CCTNNNNNAGG	1 cut(s)	464
BstF5I	GGATG	8 cut(s)	216, 502, 1124, 1190, 1218, 1537, 1748, 1801
BstFNI	CGCG	3 cut(s)	56, 200, 396
BstH2I	RGCGCY	2 cut(s)	150, 1422
BstHHI	GCGC	7 cut(s)	58, 149, 202, 398, 822, 1189, 1421
BstMAI	GTCTC	2 cut(s)	457, 1866
BstNI	CCWGG	1 cut(s)	338
BstNSI	RCATGY	1 cut(s)	731
BstPI	GGTNACC	1 cut(s)	437
BstSCI	CCNGG	3 cut(s)	302, 336, 421
BstSFI	CTRYAG	3 cut(s)	136, 945, 1110
BstSLI	GKGCMC	2 cut(s)	344, 1684
BstUI	CGCG	3 cut(s)	56, 200, 396
BstX2I	RGATCY	1 cut(s)	245
BstXI	CCANNNNNNTGG	1 cut(s)	1067
BstYI	RGATCY	1 cut(s)	245
BsuI	GTATCC	1 cut(s)	919
BsuRI	GGCC	1 cut(s)	239
BtgI	CCRYGG	1 cut(s)	433
BtsCI	GGATG	8 cut(s)	216, 502, 1124, 1190, 1218, 1537, 1748, 1801
BtsI	GCAGTG	1 cut(s)	399
BtsIMutI	CAGTG	4 cut(s)	129, 399, 822, 1471
Cac8I	GCNNGC	9 cut(s)	31, 35, 237, 316, 351, 379, 557, 718, 1823
CfoI	GCGC	7 cut(s)	58, 149, 202, 398, 822, 1189, 1421
Cfr10I	RCCGGY	1 cut(s)	314
Cfr13I	GGNCC	4 cut(s)	358, 580, 1268, 1408
CseI	GACGC	3 cut(s)	274, 380, 1613
CviAII	CATG	9 cut(s)	415, 618, 691, 728, 735, 851, 1061, 1404, 1769
DdeI	CTNAG	2 cut(s)	497, 1512
DinI	GGCGCC	1 cut(s)	148
EaeI	YGGCCR	1 cut(s)	237
Eam1104I	CTCTTC	1 cut(s)	1581
EarI	CTCTTC	1 cut(s)	1581
EciI	GGCGGA	2 cut(s)	238, 445
Eco130I	CCWWGG	1 cut(s)	1481
Eco24I	GRGCYC	1 cut(s)	423
Eco32I	GATATC	1 cut(s)	1073
Eco47I	GGWCC	4 cut(s)	358, 580, 1268, 1408
Eco88I	CYCGRG	2 cut(s)	660, 1208
Eco91I	GGTNACC	1 cut(s)	437
EcoNI	CCTNNNNNAGG	1 cut(s)	464
EcoO109I	RGGNCCY	3 cut(s)	358, 580, 1408
EcoO65I	GGTNACC	1 cut(s)	437
EcoRII	CCWGG	1 cut(s)	336
EcoRV	GATATC	1 cut(s)	1073
EcoT14I	CCWWGG	1 cut(s)	1481
EcoT38I	GRGCYC	1 cut(s)	423
EgeI	GGCGCC	1 cut(s)	148
EheI	GGCGCC	1 cut(s)	148
ErhI	CCWWGG	1 cut(s)	1481
Esp3I	CGTCTC	1 cut(s)	457
FaeI	CATG	9 cut(s)	418, 621, 694, 731, 738, 854, 1064, 1407, 1772
FalI	AAGNNNNNCTT	2 cut(s)	903, 935
FaqI	GGGAC	3 cut(s)	650, 1114, 1421
FatI	CATG	9 cut(s)	414, 617, 690, 727, 734, 850, 1060, 1403, 1768
FauI	CCCGC	2 cut(s)	358, 771
FauNDI	CATATG	2 cut(s)	864, 1372
FblI	GTMKAC	2 cut(s)	132, 369
FokI	GGATG	8 cut(s)	203, 489, 1111, 1177, 1225, 1544, 1755, 1808
FriOI	GRGCYC	1 cut(s)	423
FspBI	CTAG	2 cut(s)	717, 756
FspI	TGCGCA	1 cut(s)	821
GlaI	GCGC	7 cut(s)	57, 148, 201, 397, 821, 1188, 1420
HaeII	RGCGCY	2 cut(s)	150, 1422
HaeIII	GGCC	1 cut(s)	239
HapII	CCGG	6 cut(s)	252, 303, 315, 423, 1128, 1583
HgaI	GACGC	3 cut(s)	274, 380, 1613
HhaI	GCGC	7 cut(s)	58, 149, 202, 398, 822, 1189, 1421
Hin1I	GRCGYC	1 cut(s)	147
Hin1II	CATG	9 cut(s)	418, 621, 694, 731, 738, 854, 1064, 1407, 1772
Hin6I	GCGC	7 cut(s)	56, 147, 200, 396, 820, 1187, 1419
HinP1I	GCGC	7 cut(s)	56, 147, 200, 396, 820, 1187, 1419
HincII	GTYRAC	1 cut(s)	370
HindII	GTYRAC	1 cut(s)	370
HinfI	GANTC	9 cut(s)	129, 255, 324, 663, 694, 892, 1366, 1376, 1859
HpaII	CCGG	6 cut(s)	252, 303, 315, 423, 1128, 1583
Hpy166II	GTNNAC	5 cut(s)	133, 370, 593, 860, 1205
Hpy188I	TCNGA	4 cut(s)	221, 934, 1515, 1846
Hpy8I	GTNNAC	5 cut(s)	133, 370, 593, 860, 1205
Hpy99I	CGWCG	4 cut(s)	225, 245, 371, 374
HpyAV	CCTTC	4 cut(s)	679, 966, 1599, 1796
HpyCH4III	ACNGT	5 cut(s)	437, 590, 817, 1363, 1466
HpyCH4IV	ACGT	2 cut(s)	752, 1868
HpyF3I	CTNAG	2 cut(s)	497, 1512
HpySE526I	ACGT	2 cut(s)	752, 1868
Hsp92I	GRCGYC	1 cut(s)	147
Hsp92II	CATG	9 cut(s)	418, 621, 694, 731, 738, 854, 1064, 1407, 1772
HspAI	GCGC	7 cut(s)	56, 147, 200, 396, 820, 1187, 1419
KasI	GGCGCC	1 cut(s)	146
KflI	GGGWCCC	1 cut(s)	1408
Kpn2I	TCCGGA	2 cut(s)	1127, 1582
KroI	GCCGGC	1 cut(s)	314
KroNI	GCCGGC	1 cut(s)	316
LmnI	GCTCC	3 cut(s)	418, 640, 1165
LweI	GCATC	7 cut(s)	30, 196, 511, 781, 1004, 1443, 1769
MaeI	CTAG	2 cut(s)	717, 756
MaeII	ACGT	2 cut(s)	752, 1868
MaeIII	GTNAC	5 cut(s)	173, 437, 885, 1312, 1363
MboII	GAAGA	2 cut(s)	1286, 1598
MflI	RGATCY	1 cut(s)	245
MhlI	GDGCHC	3 cut(s)	344, 423, 1684
Mly113I	GGCGCC	1 cut(s)	147
MlyI	GAGTC	6 cut(s)	138, 672, 688, 886, 1360, 1868
MmeI	TCCRAC	3 cut(s)	244, 1246, 1382
MreI	CGCCGGCG	1 cut(s)	314
MroI	TCCGGA	2 cut(s)	1127, 1582
MroNI	GCCGGC	1 cut(s)	314
MseI	TTAA	4 cut(s)	641, 1031, 1449, 1829
MslI	CAYNNNNRTG	5 cut(s)	855, 1065, 1084, 1687, 1716
MspA1I	CMGCKG	4 cut(s)	141, 377, 723, 1115
MspI	CCGG	6 cut(s)	252, 303, 315, 423, 1128, 1583
MspR9I	CCNGG	3 cut(s)	304, 338, 423
Mva1269I	GAATGC	3 cut(s)	532, 1189, 1723
MvaI	CCWGG	1 cut(s)	338
MvnI	CGCG	3 cut(s)	56, 200, 396
NaeI	GCCGGC	1 cut(s)	316
NarI	GGCGCC	1 cut(s)	147
NciI	CCSGG	2 cut(s)	304, 423
NdeI	CATATG	2 cut(s)	864, 1372
NgoMIV	GCCGGC	1 cut(s)	314
NheI	GCTAGC	1 cut(s)	716
NlaIII	CATG	9 cut(s)	418, 621, 694, 731, 738, 854, 1064, 1407, 1772
NlaIV	GGNNCC	6 cut(s)	148, 247, 343, 420, 1409, 1410
NmeAIII	GCCGAG	3 cut(s)	168, 256, 379
NmuCI	GTSAC	4 cut(s)	437, 885, 1312, 1363
NsbI	TGCGCA	1 cut(s)	821
NspI	RCATGY	1 cut(s)	731
OliI	CACNNNNGTG	1 cut(s)	1084
PaeR7I	CTCGAG	1 cut(s)	660
PasI	CCCWGGG	1 cut(s)	337
PcsI	WCGNNNNNNNCGW	1 cut(s)	378
PctI	GAATGC	3 cut(s)	532, 1189, 1723
PdiI	GCCGGC	1 cut(s)	316
PfeI	GAWTC	3 cut(s)	255, 324, 1376
PfoI	TCCNGGA	1 cut(s)	302
PleI	GAGTC	6 cut(s)	137, 671, 688, 886, 1360, 1867
PluTI	GGCGCC	1 cut(s)	150
PpsI	GAGTC	6 cut(s)	137, 671, 688, 886, 1360, 1867
PpuMI	RGGWCCY	3 cut(s)	358, 580, 1408
PshBI	ATTAAT	1 cut(s)	641
PsiI	TTATAA	1 cut(s)	1283
Psp5II	RGGWCCY	3 cut(s)	358, 580, 1408
Psp6I	CCWGG	1 cut(s)	336
PspEI	GGTNACC	1 cut(s)	437
PspGI	CCWGG	1 cut(s)	336
PspN4I	GGNNCC	6 cut(s)	148, 247, 343, 420, 1409, 1410
PspPI	GGNCC	4 cut(s)	358, 580, 1268, 1408
PspPPI	RGGWCCY	3 cut(s)	358, 580, 1408
PstI	CTGCAG	2 cut(s)	140, 1114
PsuI	RGATCY	1 cut(s)	245
PvuII	CAGCTG	2 cut(s)	377, 1115
RseI	CAYNNNNRTG	5 cut(s)	855, 1065, 1084, 1687, 1716
SalI	GTCGAC	1 cut(s)	368
SaqAI	TTAA	4 cut(s)	641, 1031, 1449, 1829
Sau96I	GGNCC	4 cut(s)	358, 580, 1268, 1408
SchI	GAGTC	6 cut(s)	138, 672, 688, 886, 1360, 1868
ScrFI	CCNGG	3 cut(s)	304, 338, 423
SduI	GDGCHC	3 cut(s)	344, 423, 1684
SfaNI	GCATC	7 cut(s)	30, 196, 511, 781, 1004, 1443, 1769
SfcI	CTRYAG	3 cut(s)	136, 945, 1110
SfoI	GGCGCC	1 cut(s)	148
Sfr274I	CTCGAG	1 cut(s)	660
SgrAI	CRCCGGYG	1 cut(s)	314
SgrDI	CGTCGACG	1 cut(s)	368
SinI	GGWCC	4 cut(s)	358, 580, 1268, 1408
SlaI	CTCGAG	1 cut(s)	660
SmiMI	CAYNNNNRTG	5 cut(s)	855, 1065, 1084, 1687, 1716
SmlI	CTYRAG	2 cut(s)	660, 680
SmoI	CTYRAG	2 cut(s)	660, 680
SspDI	GGCGCC	1 cut(s)	146
SspMI	CTAG	2 cut(s)	717, 756
StyD4I	CCNGG	3 cut(s)	302, 336, 421
StyI	CCWWGG	1 cut(s)	1481
TaaI	ACNGT	5 cut(s)	437, 590, 817, 1363, 1466
TaiI	ACGT	2 cut(s)	755, 1871
TaqI	TCGA	6 cut(s)	204, 369, 661, 763, 1494, 1700
TauI	GCSGC	7 cut(s)	107, 144, 147, 152, 212, 230, 396
TfiI	GAWTC	3 cut(s)	255, 324, 1376
Tru1I	TTAA	4 cut(s)	641, 1031, 1449, 1829
Tru9I	TTAA	4 cut(s)	641, 1031, 1449, 1829
TscAI	CASTG	4 cut(s)	129, 406, 822, 1471
TseFI	GTSAC	4 cut(s)	437, 885, 1312, 1363
Tsp45I	GTSAC	4 cut(s)	437, 885, 1312, 1363
TspDTI	ATGAA	5 cut(s)	1113, 1272, 1353, 1389, 1491
TspGWI	ACGGA	3 cut(s)	258, 664, 1612
TspRI	CASTG	4 cut(s)	129, 406, 822, 1471
VpaK11BI	GGWCC	4 cut(s)	358, 580, 1268, 1408
VspI	ATTAAT	1 cut(s)	641
XagI	CCTNNNNNAGG	1 cut(s)	464
XapI	RAATTY	1 cut(s)	1429
XbaI	TCTAGA	1 cut(s)	755
XceI	RCATGY	1 cut(s)	731
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1045
XhoI	CTCGAG	1 cut(s)	660
XmiI	GTMKAC	2 cut(s)	132, 369
XspI	CTAG	2 cut(s)	717, 756

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.