Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0010228

Physical Location & Seq

Genomic Coordinates Reverse (-)

379934 .. 385040

Gene Structure 5107 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G000400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGGCGCTCAGAGTTTCTCCTTCTTCTCTACTCTGCAGCTGCGACTGCAACGCAACTCCTTCGCATAACAATGCCAACTCTCTCTCATCCCACGCGCTCCATGCCTCCTACATCCGACGCGCCGTCGAGCTCGCCGATAAATCCGCCGGCTTCACCTCTCCCCACCCCAACTTCGGCTGCGTCATCGCCACTCCTTCCGGCAAAGTGGCCGGCGAGGGCTTCCTCTACGCCCAGGGCACCAGGCCCGCCGAGGTCCTCGCGGTCGAGGCCGCCGGACAGCTCTCCCGCCAAGCCACCGCTTATCTGAACATGGAGCCCGGCGACTGCCACGGCGACCACTCCGCCGTCTCCGCCCTCGTTCAGGGCGGGGTTGAAAGAGTGGTGATTGGGTTGAGGCATCCACTGCAAAGTCAAGGCTTGCAAGTTGAGGTGCTCGGTGAGGACCTCAACAGCAAACTCATCGAGGAAGCTCGGAAGTCGTGCCTGCTGGCTAATGCTCCTTTAATTTGTAGAGCTGCTTCTCGAGTCCCCTTCTCTGTTCTCAAGAAAATTGCTGCTTCCAGTGGACATGCATCATGGATTAGCAGCAAGACATCTAGAAATCGAGTTTTTGAACTGCGGGGTACAAGTGATGCCATCATTGTAGGGGGAAACACAGCACGCAGGGACAATCCGAGGCTAACTGCGAGGCATGGAGGTGGACATATGCCCATGCGGATTGTAATGACACAGACACTTGATCTCCCTGAGGAAGCAAACCTTTGGGACACCTCTGATGTTTCTACTATAGTCGTGACACAAAGGGGTGCGAGAAGGAGTTTCCAGAAATTTCTTGCATCTAAAGGAATTGAAGTCGTGGAGTTTGACATCTTAAACCCCAGAGAAGTAATGGAGTACTTCCATGATCGTGGATATCTTTCAATTTTGTGGGAGTGTGGAGGGACACTATCTGCAGCCGCTATTTCATCTGGAGTAATACATAAGGTCTTTGCTTTTGTTGCTCCTAAGATAATTGGTGGAAAAAATGCTCCATCCCCTGTAGGTGAACTTGGGATGGTTGAAATGACACAAGCCTTGGATTTAATTGATGTTTGCTATGAACAGGTTGGACCTGACATGCTTGTTAGTGGTTTTCTTCAACCCATACCAGATCTGACGCCTGTTATTCCATCAGTTGATGAAACATATGAAATTGATCCAACTGTCACTCCTTATGAATCAAGAATCATATTCTTTTACAAAACATGGGATCCTTATGGCGCTTTCTCAAATTTCTCTCCTCACCCAATTAAGATGCTTGATGTTGATGGTGATTATTCCACTTGGATGAGTGTAGAGCATTACTACCAGGCTCACAAGTTTGTTGGGGTGGATGATCCTGTGGCACGAGATTGTGTTGAAAATATCAAGTCTGCAAAAAGTCCGGAAGAAGCAGCACGAATAGGACGGTCAATGCAGAGGCAGCACCCTTATTTAGTAAGATCCGACTGGGAAAGTGTCAAGATTGATGTGATGTACAGGGCACTAAAATGCAAGTTCTCAATATACCCACATTTGAATTCTATGTTGCTGTCAACTGCTGGATCTGTTCTCGTTGAAGCTTCACCGCATGATCTTTTCTGGGGTGGAGGCCGGGATGGAGAAGGCCTAAATTATTTGGGGAGGCTTTTGATGCAGTTGAGATCAGAGTTTCTTGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004159 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016491 GO:0016627 GO:0016628 GO:0016787 GO:0016798 GO:0016799 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0055114 GO:0071704 GO:0090304 GO:1901135 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko00740 ko01100 ko01110 ko02024 map00740 map01100 map01110 map02024

Pfam Domains

Protein Families

DUF1768 RibD_C dCMP_cyt_deam_1

Protein Analysis

566

Amino Acids

61.87

Weight (kDa)

6.15

Isoelectric Point (pI)

43.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RibD_C	PF01872	183 - 374	1e-34	RibD C-terminal domain
NADAR	PF08719	411 - 564	1.5e-35	NADAR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010228)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47390 AT3G47390
fragaria_vesca	FvH4_6g00440 FvH4_6g00440
malus_domestica	MD04G1245400.v1.1 MD13G1061000.v1.1
prunus_persica	Prupe.6G362000_v2.0.a1
pyrus_communis	pycom04g21610 pycom06g10780 pycom12g23910
rosa_chinensis	RchiOBHm_Chr3g0447811
rosa_laevigata	RLG00000025969
rosa_multiflora	Rmu_co8480445.1_g000001 Rmu_ssc0000391.1_g000018
rosa_roxburghii	Rroxscaffold_6G00426010
rosa_rugosa	Rorug02G0605900
rosa_samantha	Rh3AG005400 Rh3BG005000 Rh3CG005300 Rh3DG005500
rosa_wichuraiana	Rw3G000400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	236
AccII	CGCG	3 cut(s)	95, 120, 260
AccIII	TCCGGA	1 cut(s)	1423
AclWI	GGATC	6 cut(s)	1190, 1244, 1257, 1370, 1476, 1591
AcoI	YGGCCR	1 cut(s)	207
AcsI	RAATTY	3 cut(s)	827, 1270, 1558
AcyI	GRCGYC	1 cut(s)	1157
AfaI	GTAC	3 cut(s)	625, 896, 1517
AfiI	CCNNNNNNNGG	2 cut(s)	173, 361
AgsI	TTSAA	9 cut(s)	374, 614, 851, 921, 1061, 1139, 1400, 1558, 1598
AhdI	GACNNNNNGTC	1 cut(s)	122
AjnI	CCWGG	3 cut(s)	231, 239, 1347
AluBI	AGCT	6 cut(s)	39, 130, 280, 470, 515, 1601
AluI	AGCT	6 cut(s)	39, 130, 280, 470, 515, 1601
Alw21I	GWGCWC	2 cut(s)	132, 435
Alw26I	GTCTC	1 cut(s)	352
AlwI	GGATC	6 cut(s)	1190, 1244, 1257, 1370, 1476, 1591
Ama87I	CYCGRG	1 cut(s)	522
Aor13HI	TCCGGA	1 cut(s)	1423
AoxI	GGCC	5 cut(s)	207, 242, 267, 1630, 1645
ApeKI	GCWGC	9 cut(s)	36, 39, 177, 515, 554, 585, 953, 1433, 1462
ApoI	RAATTY	3 cut(s)	827, 1270, 1558
AspLEI	GCGC	4 cut(s)	7, 97, 122, 1262
AspS9I	GGNCC	4 cut(s)	243, 253, 442, 1109
AsuC2I	CCSGG	2 cut(s)	318, 1634
AsuHPI	GGTGA	7 cut(s)	145, 394, 449, 1055, 1274, 1322, 1596
AvaI	CYCGRG	1 cut(s)	522
AvaII	GGWCC	3 cut(s)	253, 442, 1109
AxyI	CCTNAGG	1 cut(s)	747
BaeGI	GKGCMC	2 cut(s)	239, 1525
BamHI	GGATCC	1 cut(s)	1249
BanI	GGYRCC	1 cut(s)	236
BanII	GRGCYC	2 cut(s)	132, 318
BarI	GAAGNNNNNNTAC	2 cut(s)	502, 534
BauI	CACGAG	1 cut(s)	1386
Bbv12I	GWGCWC	2 cut(s)	132, 435
BbvI	GCAGC	9 cut(s)	26, 48, 164, 502, 541, 597, 965, 1445, 1474
BccI	CCATC	6 cut(s)	644, 1039, 1048, 1177, 1301, 1631
BceAI	ACGGC	3 cut(s)	107, 329, 346
BcgI	CGANNNNNNTGC	4 cut(s)	42, 76, 442, 476
BciT130I	CCWGG	3 cut(s)	233, 241, 1349
BcnI	CCSGG	2 cut(s)	318, 1634
BcoDI	GTCTC	1 cut(s)	352
BfaI	CTAG	1 cut(s)	597
BfmI	CTRYAG	4 cut(s)	34, 786, 951, 1038
BfoI	RGCGCY	2 cut(s)	8, 1263
BglII	AGATCT	1 cut(s)	1150
BmcAI	AGTACT	1 cut(s)	896
Bme1390I	CCNGG	5 cut(s)	233, 241, 318, 1349, 1634
Bme18I	GGWCC	3 cut(s)	253, 442, 1109
BmeRI	GACNNNNNGTC	1 cut(s)	122
BmeT110I	CYCGRG	1 cut(s)	522
BmgT120I	GGNCC	4 cut(s)	243, 253, 442, 1109
BmiI	GGNNCC	3 cut(s)	238, 315, 1251
BmrFI	CCNGG	5 cut(s)	233, 241, 318, 1349, 1634
BmrI	ACTGGG	1 cut(s)	1498
BmsI	GCATC	6 cut(s)	406, 581, 622, 845, 1284, 1662
BmuI	ACTGGG	1 cut(s)	1498
BpmI	CTGGAG	1 cut(s)	990
BpuEI	CTTGAG	1 cut(s)	527
BpuMI	CCSGG	2 cut(s)	318, 1634
BsaHI	GRCGYC	1 cut(s)	1157
BsaJI	CCNNGG	6 cut(s)	231, 232, 249, 328, 674, 1074
BsaWI	WCCGGW	1 cut(s)	1423
BsaXI	ACNNNNNCTCC	4 cut(s)	726, 756, 1192, 1222
Bsc4I	CCNNNNNNNGG	2 cut(s)	173, 361
Bse118I	RCCGGY	2 cut(s)	146, 209
Bse1I	ACTGG	2 cut(s)	561, 1493
Bse21I	CCTNAGG	1 cut(s)	747
BseAI	TCCGGA	1 cut(s)	1423
BseBI	CCWGG	3 cut(s)	233, 241, 1349
BseDI	CCNNGG	6 cut(s)	231, 232, 249, 328, 674, 1074
BseGI	GGATG	8 cut(s)	86, 111, 397, 1031, 1059, 1332, 1378, 1642
BseLI	CCNNNNNNNGG	2 cut(s)	173, 361
BseMII	CTCAG	2 cut(s)	22, 738
BseNI	ACTGG	2 cut(s)	561, 1493
BseRI	GAGGAG	1 cut(s)	1269
BseSI	GKGCMC	2 cut(s)	239, 1525
BseXI	GCAGC	9 cut(s)	26, 48, 164, 502, 541, 597, 965, 1445, 1474
Bsh1236I	CGCG	3 cut(s)	95, 120, 260
Bsh1285I	CGRYCG	1 cut(s)	264
BshFI	GGCC	5 cut(s)	209, 244, 269, 1632, 1647
BshNI	GGYRCC	1 cut(s)	236
BsiEI	CGRYCG	1 cut(s)	264
BsiHKAI	GWGCWC	2 cut(s)	132, 435
BsiHKCI	CYCGRG	1 cut(s)	522
BsiSI	CCGG	7 cut(s)	147, 198, 210, 273, 318, 1424, 1633
BslFI	GGGAC	4 cut(s)	512, 680, 779, 955
BslI	CCNNNNNNNGG	2 cut(s)	173, 361
BsmAI	GTCTC	1 cut(s)	352
BsmBI	CGTCTC	1 cut(s)	352
BsmFI	GGGAC	4 cut(s)	512, 680, 779, 955
BsnI	GGCC	5 cut(s)	209, 244, 269, 1632, 1647
BsoBI	CYCGRG	1 cut(s)	522
Bsp1286I	GDGCHC	5 cut(s)	132, 239, 318, 435, 1525
Bsp13I	TCCGGA	1 cut(s)	1423
Bsp1407I	TGTACA	1 cut(s)	1515
BspANI	GGCC	5 cut(s)	209, 244, 269, 1632, 1647
BspCNI	CTCAG	2 cut(s)	21, 739
BspEI	TCCGGA	1 cut(s)	1423
BspFNI	CGCG	3 cut(s)	95, 120, 260
BspLI	GGNNCC	3 cut(s)	238, 315, 1251
BspMAI	CTGCAG	2 cut(s)	38, 955
BspPI	GGATC	6 cut(s)	1190, 1244, 1257, 1370, 1476, 1591
BspT107I	GGYRCC	1 cut(s)	236
BsrFI	RCCGGY	2 cut(s)	146, 209
BsrGI	TGTACA	1 cut(s)	1515
BsrI	ACTGG	2 cut(s)	561, 1493
BssAI	RCCGGY	2 cut(s)	146, 209
BssECI	CCNNGG	6 cut(s)	231, 232, 249, 328, 674, 1074
BssNI	GRCGYC	1 cut(s)	1157
BssSI	CACGAG	1 cut(s)	1386
BssT1I	CCWWGG	1 cut(s)	1074
Bst2BI	CACGAG	1 cut(s)	1386
Bst2UI	CCWGG	3 cut(s)	233, 241, 1349
Bst4CI	ACNGT	2 cut(s)	1204, 1449
BstACI	GRCGYC	1 cut(s)	1157
BstAPI	GCANNNNNTGC	1 cut(s)	403
BstAUI	TGTACA	1 cut(s)	1515
BstC8I	GCNNGC	8 cut(s)	132, 148, 211, 246, 419, 485, 489, 661
BstDEI	CTNAG	3 cut(s)	8, 747, 1005
BstDSI	CCRYGG	1 cut(s)	328
BstENI	CCTNNNNNAGG	1 cut(s)	359
BstF5I	GGATG	8 cut(s)	86, 111, 397, 1031, 1059, 1332, 1378, 1642
BstFNI	CGCG	3 cut(s)	95, 120, 260
BstH2I	RGCGCY	2 cut(s)	8, 1263
BstHHI	GCGC	4 cut(s)	7, 97, 122, 1262
BstMAI	GTCTC	1 cut(s)	352
BstMCI	CGRYCG	1 cut(s)	264
BstMWI	GCNNNNNNNGC	8 cut(s)	45, 101, 266, 350, 403, 998, 1462, 1672
BstNI	CCWGG	3 cut(s)	233, 241, 1349
BstNSI	RCATGY	2 cut(s)	572, 1120
BstSCI	CCNGG	5 cut(s)	231, 239, 316, 1347, 1632
BstSFI	CTRYAG	4 cut(s)	34, 786, 951, 1038
BstSLI	GKGCMC	2 cut(s)	239, 1525
BstUI	CGCG	3 cut(s)	95, 120, 260
BstV1I	GCAGC	9 cut(s)	26, 48, 164, 502, 541, 597, 965, 1445, 1474
BstX2I	RGATCY	4 cut(s)	1150, 1249, 1481, 1583
BstXI	CCANNNNNNTGG	1 cut(s)	908
BstYI	RGATCY	4 cut(s)	1150, 1249, 1481, 1583
Bsu36I	CCTNAGG	1 cut(s)	747
BsuRI	GGCC	5 cut(s)	209, 244, 269, 1632, 1647
BtgI	CCRYGG	1 cut(s)	328
BtgZI	GCGATG	1 cut(s)	169
BtsCI	GGATG	8 cut(s)	86, 111, 397, 1031, 1059, 1332, 1378, 1642
BtsI	GCAGTG	1 cut(s)	401
BtsIMutI	CAGTG	2 cut(s)	401, 568
Cac8I	GCNNGC	8 cut(s)	132, 148, 211, 246, 419, 485, 489, 661
CfoI	GCGC	4 cut(s)	7, 97, 122, 1262
Cfr10I	RCCGGY	2 cut(s)	146, 209
Cfr13I	GGNCC	4 cut(s)	243, 253, 442, 1109
CseI	GACGC	3 cut(s)	126, 169, 1165
Csp6I	GTAC	3 cut(s)	624, 895, 1516
CviQI	GTAC	3 cut(s)	624, 895, 1516
DdeI	CTNAG	3 cut(s)	8, 747, 1005
DriI	GACNNNNNGTC	1 cut(s)	122
EaeI	YGGCCR	1 cut(s)	207
Eam1105I	GACNNNNNGTC	1 cut(s)	122
EciI	GGCGGA	3 cut(s)	133, 331, 340
Ecl136II	GAGCTC	1 cut(s)	130
Eco130I	CCWWGG	1 cut(s)	1074
Eco147I	AGGCCT	1 cut(s)	1647
Eco24I	GRGCYC	2 cut(s)	132, 318
Eco32I	GATATC	1 cut(s)	914
Eco47I	GGWCC	3 cut(s)	253, 442, 1109
Eco53kI	GAGCTC	1 cut(s)	130
Eco81I	CCTNAGG	1 cut(s)	747
Eco88I	CYCGRG	1 cut(s)	522
EcoICRI	GAGCTC	1 cut(s)	130
EcoNI	CCTNNNNNAGG	1 cut(s)	359
EcoO109I	RGGNCCY	2 cut(s)	253, 442
EcoRI	GAATTC	1 cut(s)	1558
EcoRII	CCWGG	3 cut(s)	231, 239, 1347
EcoRV	GATATC	1 cut(s)	914
EcoT14I	CCWWGG	1 cut(s)	1074
EcoT22I	ATGCAT	1 cut(s)	574
EcoT38I	GRGCYC	2 cut(s)	132, 318
ErhI	CCWWGG	1 cut(s)	1074
Esp3I	CGTCTC	1 cut(s)	352
FalI	AAGNNNNNCTT	2 cut(s)	744, 776
FaqI	GGGAC	4 cut(s)	512, 680, 779, 955
FauI	CCCGC	4 cut(s)	253, 293, 359, 612
FauNDI	CATATG	2 cut(s)	705, 1186
FokI	GGATG	8 cut(s)	73, 98, 384, 1018, 1066, 1339, 1385, 1649
FriOI	GRGCYC	2 cut(s)	132, 318
FspBI	CTAG	1 cut(s)	597
GlaI	GCGC	4 cut(s)	6, 96, 121, 1261
GsuI	CTGGAG	1 cut(s)	990
HaeII	RGCGCY	2 cut(s)	8, 1263
HaeIII	GGCC	5 cut(s)	209, 244, 269, 1632, 1647
HapII	CCGG	7 cut(s)	147, 198, 210, 273, 318, 1424, 1633
HgaI	GACGC	3 cut(s)	126, 169, 1165
HhaI	GCGC	4 cut(s)	7, 97, 122, 1262
Hin1I	GRCGYC	1 cut(s)	1157
Hin6I	GCGC	4 cut(s)	5, 95, 120, 1260
HinP1I	GCGC	4 cut(s)	5, 95, 120, 1260
HincII	GTYRAC	1 cut(s)	1575
HindII	GTYRAC	1 cut(s)	1575
HindIII	AAGCTT	1 cut(s)	1599
HinfI	GANTC	3 cut(s)	525, 1217, 1224
HpaII	CCGG	7 cut(s)	147, 198, 210, 273, 318, 1424, 1633
HphI	GGTGA	7 cut(s)	145, 394, 449, 1055, 1274, 1322, 1596
Hpy166II	GTNNAC	4 cut(s)	566, 701, 1046, 1575
Hpy188I	TCNGA	9 cut(s)	11, 116, 306, 474, 675, 775, 1155, 1486, 1687
Hpy188III	TCNNGA	9 cut(s)	522, 544, 597, 793, 823, 969, 1221, 1424, 1501
Hpy8I	GTNNAC	4 cut(s)	566, 701, 1046, 1575
Hpy99I	CGWCG	2 cut(s)	120, 128
HpyAV	CCTTC	6 cut(s)	30, 69, 204, 541, 807, 1637
HpyCH4III	ACNGT	2 cut(s)	1204, 1449
HpyF10VI	GCNNNNNNNGC	8 cut(s)	45, 101, 266, 350, 403, 998, 1462, 1672
HpyF3I	CTNAG	3 cut(s)	8, 747, 1005
Hsp92I	GRCGYC	1 cut(s)	1157
HspAI	GCGC	4 cut(s)	5, 95, 120, 1260
Kpn2I	TCCGGA	1 cut(s)	1423
KroI	GCCGGC	2 cut(s)	146, 209
KroNI	GCCGGC	2 cut(s)	148, 211
LmnI	GCTCC	5 cut(s)	102, 313, 502, 1006, 1033
Lsp1109I	GCAGC	9 cut(s)	26, 48, 164, 502, 541, 597, 965, 1445, 1474
LweI	GCATC	6 cut(s)	406, 581, 622, 845, 1284, 1662
MaeI	CTAG	1 cut(s)	597
MaeIII	GTNAC	2 cut(s)	793, 1204
MboII	GAAGA	3 cut(s)	15, 1127, 1439
MflI	RGATCY	4 cut(s)	1150, 1249, 1481, 1583
MhlI	GDGCHC	5 cut(s)	132, 239, 318, 435, 1525
MlyI	GAGTC	1 cut(s)	534
MmeI	TCCRAC	4 cut(s)	139, 1087, 1223, 1509
Mph1103I	ATGCAT	1 cut(s)	574
MroI	TCCGGA	1 cut(s)	1423
MroNI	GCCGGC	2 cut(s)	146, 209
MseI	TTAA	4 cut(s)	503, 872, 1082, 1290
MslI	CAYNNNNRTG	5 cut(s)	69, 696, 906, 1325, 1528
MspA1I	CMGCKG	1 cut(s)	39
MspI	CCGG	7 cut(s)	147, 198, 210, 273, 318, 1424, 1633
MspR9I	CCNGG	5 cut(s)	233, 241, 318, 1349, 1634
MvaI	CCWGG	3 cut(s)	233, 241, 1349
MvnI	CGCG	3 cut(s)	95, 120, 260
MwoI	GCNNNNNNNGC	8 cut(s)	45, 101, 266, 350, 403, 998, 1462, 1672
NaeI	GCCGGC	2 cut(s)	148, 211
NciI	CCSGG	2 cut(s)	318, 1634
NdeI	CATATG	2 cut(s)	705, 1186
NgoMIV	GCCGGC	2 cut(s)	146, 209
NlaIV	GGNNCC	3 cut(s)	238, 315, 1251
NmeAIII	GCCGAG	1 cut(s)	274
NmuCI	GTSAC	2 cut(s)	793, 1204
NsiI	ATGCAT	1 cut(s)	574
NspI	RCATGY	2 cut(s)	572, 1120
PaeR7I	CTCGAG	1 cut(s)	522
PasI	CCCWGGG	1 cut(s)	232
PceI	AGGCCT	1 cut(s)	1647
PcsI	WCGNNNNNNNCGW	1 cut(s)	132
PdiI	GCCGGC	2 cut(s)	148, 211
PfeI	GAWTC	2 cut(s)	1217, 1224
PleI	GAGTC	1 cut(s)	533
PpsI	GAGTC	1 cut(s)	533
PpuMI	RGGWCCY	2 cut(s)	253, 442
Psp124BI	GAGCTC	1 cut(s)	132
Psp5II	RGGWCCY	2 cut(s)	253, 442
Psp6I	CCWGG	3 cut(s)	231, 239, 1347
PspGI	CCWGG	3 cut(s)	231, 239, 1347
PspN4I	GGNNCC	3 cut(s)	238, 315, 1251
PspPI	GGNCC	4 cut(s)	243, 253, 442, 1109
PspPPI	RGGWCCY	2 cut(s)	253, 442
PstI	CTGCAG	2 cut(s)	38, 955
PsuI	RGATCY	4 cut(s)	1150, 1249, 1481, 1583
PvuII	CAGCTG	1 cut(s)	39
RsaI	GTAC	3 cut(s)	625, 896, 1517
RsaNI	GTAC	3 cut(s)	624, 895, 1516
RseI	CAYNNNNRTG	5 cut(s)	69, 696, 906, 1325, 1528
SacI	GAGCTC	1 cut(s)	132
SaqAI	TTAA	4 cut(s)	503, 872, 1082, 1290
Sau96I	GGNCC	4 cut(s)	243, 253, 442, 1109
ScaI	AGTACT	1 cut(s)	896
SchI	GAGTC	1 cut(s)	534
ScrFI	CCNGG	5 cut(s)	233, 241, 318, 1349, 1634
SduI	GDGCHC	5 cut(s)	132, 239, 318, 435, 1525
SfaNI	GCATC	6 cut(s)	406, 581, 622, 845, 1284, 1662
SfcI	CTRYAG	4 cut(s)	34, 786, 951, 1038
Sfr274I	CTCGAG	1 cut(s)	522
SinI	GGWCC	3 cut(s)	253, 442, 1109
SlaI	CTCGAG	1 cut(s)	522
SmiMI	CAYNNNNRTG	5 cut(s)	69, 696, 906, 1325, 1528
SmlI	CTYRAG	2 cut(s)	522, 542
SmoI	CTYRAG	2 cut(s)	522, 542
SseBI	AGGCCT	1 cut(s)	1647
SspMI	CTAG	1 cut(s)	597
SstI	GAGCTC	1 cut(s)	132
StuI	AGGCCT	1 cut(s)	1647
StyD4I	CCNGG	5 cut(s)	231, 239, 316, 1347, 1632
StyI	CCWWGG	1 cut(s)	1074
TaaI	ACNGT	2 cut(s)	1204, 1449
TaqI	TCGA	5 cut(s)	126, 264, 462, 523, 604
TatI	WGTACW	2 cut(s)	894, 1515
TauI	GCSGC	2 cut(s)	272, 959
TfiI	GAWTC	2 cut(s)	1217, 1224
Tru1I	TTAA	4 cut(s)	503, 872, 1082, 1290
Tru9I	TTAA	4 cut(s)	503, 872, 1082, 1290
TscAI	CASTG	2 cut(s)	408, 568
TseFI	GTSAC	2 cut(s)	793, 1204
TseI	GCWGC	9 cut(s)	36, 39, 177, 515, 554, 585, 953, 1433, 1462
Tsp45I	GTSAC	2 cut(s)	793, 1204
TspDTI	ATGAA	5 cut(s)	954, 1113, 1194, 1203, 1230
TspRI	CASTG	2 cut(s)	408, 568
VpaK11BI	GGWCC	3 cut(s)	253, 442, 1109
XagI	CCTNNNNNAGG	1 cut(s)	359
XapI	RAATTY	3 cut(s)	827, 1270, 1558
XbaI	TCTAGA	1 cut(s)	596
XceI	RCATGY	2 cut(s)	572, 1120
XcmI	CCANNNNNNNNNTGG	1 cut(s)	886
XhoI	CTCGAG	1 cut(s)	522
XspI	CTAG	1 cut(s)	597
ZrmI	AGTACT	1 cut(s)	896
Zsp2I	ATGCAT	1 cut(s)	574

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.