Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0010228

Physical Location & Seq

Genomic Coordinates Reverse (-)

46922615 .. 46926336

Gene Structure 3722 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00426010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGGCGCTCAGAGTTTCTCCTCCTGCTTCTATACTCTGCAACTGCAACGCAATTCCTTCGCCGCATAACAATGCCAACTCACTCTCATCCCACGCGCTCCATGCCTCCTACATCCGACGCGCCGTCGAACTCGCCGACAAATCCGCCGGCTTCACCTCTCCCCACCCCAACTTCGGCTGCGTCATCGCCACTCCTTCCGGCAAAGTCGCCGGCGAGGGCTTCCTCTACGCCCAGGGCACCAGGCCCGCGGAGGTCCTCGCCGTCGAGGCCGCCGGACAGCTCTCCAGGCAAGCCACCGCTTATCTCAACATGGAGCCCGGCGACTGCCACGGCGACCACTCCGCCGTCTCCGCCCTCGTTCAGGGCGGGGTTGAAAGAGTGGTGATTGGGTTGAGGCATCCACTGCAGCATCTAAGAGGCAATGCCATAAGGGCATTGAGAAGTCAAGGCTTGCAGGTTGAGGTGCTCGGTGAGGACCTCAACAGCAAACTCATCGAGGAAGCTCGGAAGTCGTGCCTCCTGGCTAATGCTCCTTTAATTTGTAGAGCTGCTTCTCGAGTCCCCTTCTCTGTTCTCAAGTTTGCTATGACCCTTGATGGAAAAATTGCTGCTTCCAGTGGACATGCATCATGGATAAGCAGCAAGACATCTAGAAATCGAGTTTTTGAACTGCGGGGTACAAGTGATGCCATCATTGTAGGGGGAAACACGGCACGCAGGGACAATCCGAGGCTAACCGCGAGGCATGGAGGTGGGCATATGCCCATGCGGATTGTAATGACACAGACACTTGATCTCCCTGAGGAAGCAAACCTTTGGGATACCTCTGATGTTTCTACTATAGTCGTGACACAAAGGGGTGCGAGAAGGAGTTTCCAGAAATTTCTTGCATCTAAAGGAATTGAAGTCGTGGAGTTTGACATCTTAAACCCCAGAGAAGTAATGGAGTACTTCCATGATCGTGGATATCTTTCAATTTTGTGGGAGTGTGGAGGGACACTATCTGCAGCCGCTATTTCATCTGGAGTAATACATAAGGTCTTTGCTTTTGTTGCTCCTAAGATAATTGGTGGAAAAAATGCTCCATCCCCTGTAGGTGAACTTGGGATGGTTGAAATGACACAAGCCTTGGATTTAATTGATGTTTGCTATGAACAGGTTGGACCTGACATGCTTGTTAGTGGTTTTCTTCAACCCATACCAGATCTGACGCCTGTTATTCCATCAGTTGATGAAACATATGAAATTGATCCAACTGTCACTCCTTATGAATCAAGAATCATATTCTTCTACAAAACATGGGATCCTTATGGCGCTTTCTCAAATTTCTCTCCTCACCCAATTAAGATGCTTGATGTTGATGGTGAATATTCCACTTGGTTGAGTGTAGAGCATTACTACCAGGCTCACAAGTATGTTGGGGTGGATGATCCTGTGGCACGAGATTGTGTTGAAAATATTAAGTCTGCAAAAAGTCCGGAAGAAGCAGCACGAATAGGAAGGTCAATGCAGAGGCAGCACCCTTATTTGGTAAGATCCGACTGGGAAAGTGTCAAGATTGATGTGATGTACAGGGCACTAAAATGCAAGTTCTCAATATACCCACATTTGAATTCTATGTTGCTGTCAACTGCTGGATCTGTTCTCGTTGAAGCTTCACCGCATGATCTTTTCTGGGGTGGAGGCCGGGATGGAGAAGGCCTAAATTACTTGGGGAGACTTTTGATGCAGTTGAGATCAGAGTTTCTTGGTGAGTCCCCTACATTAAGTGAGAGCTCATGCTTAGGGGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004159 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016491 GO:0016627 GO:0016628 GO:0016787 GO:0016798 GO:0016799 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0055114 GO:0071704 GO:0090304 GO:1901135 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko00740 ko01100 ko01110 ko02024 map00740 map01100 map01110 map02024

Pfam Domains

Protein Families

DUF1768 RibD_C dCMP_cyt_deam_1

Protein Analysis

597

Amino Acids

65.12

Weight (kDa)

6.27

Isoelectric Point (pI)

43.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RibD_C	PF01872	189 - 392	1.8e-41	RibD C-terminal domain
NADAR	PF08719	429 - 582	2e-35	NADAR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010228)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47390 AT3G47390
fragaria_vesca	FvH4_6g00440 FvH4_6g00440
malus_domestica	MD04G1245400.v1.1 MD13G1061000.v1.1
prunus_persica	Prupe.6G362000_v2.0.a1
pyrus_communis	pycom04g21610 pycom06g10780 pycom12g23910
rosa_chinensis	RchiOBHm_Chr3g0447811
rosa_laevigata	RLG00000025969
rosa_multiflora	Rmu_co8480445.1_g000001 Rmu_ssc0000391.1_g000018
rosa_roxburghii	Rroxscaffold_6G00426010
rosa_rugosa	Rorug02G0605900
rosa_samantha	Rh3AG005400 Rh3BG005000 Rh3CG005300 Rh3DG005500
rosa_wichuraiana	Rw3G000400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	445
AccB1I	GGYRCC	1 cut(s)	236
AccII	CGCG	4 cut(s)	95, 120, 248, 740
AccIII	TCCGGA	1 cut(s)	1477
AclWI	GGATC	6 cut(s)	1244, 1298, 1311, 1424, 1530, 1645
AcsI	RAATTY	3 cut(s)	881, 1324, 1612
AcyI	GRCGYC	1 cut(s)	1211
AfaI	GTAC	3 cut(s)	679, 950, 1571
AfiI	CCNNNNNNNGG	3 cut(s)	173, 361, 1528
AgsI	TTSAA	9 cut(s)	374, 668, 905, 975, 1115, 1193, 1454, 1612, 1652
AhdI	GACNNNNNGTC	1 cut(s)	122
AjnI	CCWGG	5 cut(s)	231, 239, 284, 519, 1401
AluBI	AGCT	5 cut(s)	280, 503, 548, 1655, 1776
AluI	AGCT	5 cut(s)	280, 503, 548, 1655, 1776
Alw21I	GWGCWC	2 cut(s)	468, 1778
Alw26I	GTCTC	2 cut(s)	352, 1711
AlwI	GGATC	6 cut(s)	1244, 1298, 1311, 1424, 1530, 1645
Ama87I	CYCGRG	1 cut(s)	555
Aor13HI	TCCGGA	1 cut(s)	1477
AoxI	GGCC	4 cut(s)	242, 267, 1684, 1699
ApeKI	GCWGC	8 cut(s)	177, 406, 548, 608, 639, 1007, 1487, 1516
ApoI	RAATTY	3 cut(s)	881, 1324, 1612
AspLEI	GCGC	4 cut(s)	7, 97, 122, 1316
AspS9I	GGNCC	4 cut(s)	243, 253, 475, 1163
AsuC2I	CCSGG	2 cut(s)	318, 1688
AsuHPI	GGTGA	8 cut(s)	145, 394, 482, 1109, 1328, 1376, 1650, 1763
AvaI	CYCGRG	1 cut(s)	555
AvaII	GGWCC	3 cut(s)	253, 475, 1163
AxyI	CCTNAGG	1 cut(s)	801
BaeGI	GKGCMC	2 cut(s)	239, 1579
BamHI	GGATCC	1 cut(s)	1303
BanI	GGYRCC	1 cut(s)	236
BanII	GRGCYC	2 cut(s)	318, 1778
BarI	GAAGNNNNNNTAC	2 cut(s)	535, 567
BauI	CACGAG	1 cut(s)	1440
Bbv12I	GWGCWC	2 cut(s)	468, 1778
BbvI	GCAGC	8 cut(s)	164, 418, 535, 595, 651, 1019, 1499, 1528
BccI	CCATC	7 cut(s)	590, 698, 1093, 1102, 1231, 1355, 1685
BceAI	ACGGC	5 cut(s)	107, 245, 329, 346, 726
BcgI	CGANNNNNNTGC	4 cut(s)	39, 73, 475, 509
BciT130I	CCWGG	5 cut(s)	233, 241, 286, 521, 1403
BciVI	GTATCC	1 cut(s)	814
BcnI	CCSGG	2 cut(s)	318, 1688
BcoDI	GTCTC	2 cut(s)	352, 1711
BfaI	CTAG	1 cut(s)	651
BfmI	CTRYAG	4 cut(s)	404, 840, 1005, 1092
BfoI	RGCGCY	2 cut(s)	8, 1317
BfuAI	ACCTGC	1 cut(s)	445
BfuI	GTATCC	1 cut(s)	814
BglI	GCCNNNNNGGC	2 cut(s)	266, 431
BglII	AGATCT	1 cut(s)	1204
BmcAI	AGTACT	1 cut(s)	950
Bme1390I	CCNGG	7 cut(s)	233, 241, 286, 318, 521, 1403, 1688
Bme18I	GGWCC	3 cut(s)	253, 475, 1163
BmeRI	GACNNNNNGTC	1 cut(s)	122
BmeT110I	CYCGRG	1 cut(s)	555
BmgT120I	GGNCC	4 cut(s)	243, 253, 475, 1163
BmiI	GGNNCC	3 cut(s)	238, 315, 1305
BmrFI	CCNGG	7 cut(s)	233, 241, 286, 318, 521, 1403, 1688
BmrI	ACTGGG	1 cut(s)	1552
BmsI	GCATC	7 cut(s)	406, 418, 635, 676, 899, 1338, 1716
BmuI	ACTGGG	1 cut(s)	1552
BpmI	CTGGAG	2 cut(s)	268, 1044
Bpu10I	CCTNAGC	1 cut(s)	1783
BpuEI	CTTGAG	1 cut(s)	560
BpuMI	CCSGG	2 cut(s)	318, 1688
BsaHI	GRCGYC	1 cut(s)	1211
BsaJI	CCNNGG	6 cut(s)	231, 232, 246, 328, 728, 1128
BsaWI	WCCGGW	1 cut(s)	1477
BsaXI	ACNNNNNCTCC	4 cut(s)	780, 810, 1246, 1276
Bsc4I	CCNNNNNNNGG	3 cut(s)	173, 361, 1528
Bse118I	RCCGGY	2 cut(s)	146, 209
Bse1I	ACTGG	2 cut(s)	615, 1547
Bse21I	CCTNAGG	1 cut(s)	801
Bse3DI	GCAATG	1 cut(s)	427
BseAI	TCCGGA	1 cut(s)	1477
BseBI	CCWGG	5 cut(s)	233, 241, 286, 521, 1403
BseDI	CCNNGG	6 cut(s)	231, 232, 246, 328, 728, 1128
BseGI	GGATG	7 cut(s)	86, 111, 397, 1085, 1113, 1432, 1696
BseLI	CCNNNNNNNGG	3 cut(s)	173, 361, 1528
BseMI	GCAATG	1 cut(s)	427
BseMII	CTCAG	2 cut(s)	22, 792
BseNI	ACTGG	2 cut(s)	615, 1547
BseRI	GAGGAG	2 cut(s)	9, 1323
BseSI	GKGCMC	2 cut(s)	239, 1579
BseXI	GCAGC	8 cut(s)	164, 418, 535, 595, 651, 1019, 1499, 1528
Bsh1236I	CGCG	4 cut(s)	95, 120, 248, 740
BshFI	GGCC	4 cut(s)	244, 269, 1686, 1701
BshNI	GGYRCC	1 cut(s)	236
BsiHKAI	GWGCWC	2 cut(s)	468, 1778
BsiHKCI	CYCGRG	1 cut(s)	555
BsiSI	CCGG	7 cut(s)	147, 198, 210, 273, 318, 1478, 1687
BslFI	GGGAC	4 cut(s)	545, 734, 1009, 1741
BslI	CCNNNNNNNGG	3 cut(s)	173, 361, 1528
BsmAI	GTCTC	2 cut(s)	352, 1711
BsmBI	CGTCTC	1 cut(s)	352
BsmFI	GGGAC	4 cut(s)	545, 734, 1009, 1741
BsnI	GGCC	4 cut(s)	244, 269, 1686, 1701
BsoBI	CYCGRG	1 cut(s)	555
Bsp1286I	GDGCHC	5 cut(s)	239, 318, 468, 1579, 1778
Bsp13I	TCCGGA	1 cut(s)	1477
Bsp1407I	TGTACA	1 cut(s)	1569
BspANI	GGCC	4 cut(s)	244, 269, 1686, 1701
BspCNI	CTCAG	2 cut(s)	21, 793
BspEI	TCCGGA	1 cut(s)	1477
BspFNI	CGCG	4 cut(s)	95, 120, 248, 740
BspLI	GGNNCC	3 cut(s)	238, 315, 1305
BspMAI	CTGCAG	2 cut(s)	408, 1009
BspMI	ACCTGC	1 cut(s)	445
BspPI	GGATC	6 cut(s)	1244, 1298, 1311, 1424, 1530, 1645
BspT107I	GGYRCC	1 cut(s)	236
BsrDI	GCAATG	1 cut(s)	427
BsrFI	RCCGGY	2 cut(s)	146, 209
BsrGI	TGTACA	1 cut(s)	1569
BsrI	ACTGG	2 cut(s)	615, 1547
BssAI	RCCGGY	2 cut(s)	146, 209
BssECI	CCNNGG	6 cut(s)	231, 232, 246, 328, 728, 1128
BssNI	GRCGYC	1 cut(s)	1211
BssSI	CACGAG	1 cut(s)	1440
BssT1I	CCWWGG	1 cut(s)	1128
Bst2BI	CACGAG	1 cut(s)	1440
Bst2UI	CCWGG	5 cut(s)	233, 241, 286, 521, 1403
Bst4CI	ACNGT	1 cut(s)	1258
BstACI	GRCGYC	1 cut(s)	1211
BstAPI	GCANNNNNTGC	1 cut(s)	403
BstAUI	TGTACA	1 cut(s)	1569
BstC8I	GCNNGC	6 cut(s)	148, 211, 246, 291, 452, 715
BstDEI	CTNAG	5 cut(s)	8, 413, 801, 1059, 1783
BstDSI	CCRYGG	2 cut(s)	246, 328
BstENI	CCTNNNNNAGG	1 cut(s)	359
BstF5I	GGATG	7 cut(s)	86, 111, 397, 1085, 1113, 1432, 1696
BstFNI	CGCG	4 cut(s)	95, 120, 248, 740
BstH2I	RGCGCY	2 cut(s)	8, 1317
BstHHI	GCGC	4 cut(s)	7, 97, 122, 1316
BstMAI	GTCTC	2 cut(s)	352, 1711
BstMWI	GCNNNNNNNGC	8 cut(s)	101, 266, 286, 350, 403, 431, 1052, 1516
BstNI	CCWGG	5 cut(s)	233, 241, 286, 521, 1403
BstNSI	RCATGY	2 cut(s)	626, 1174
BstSCI	CCNGG	7 cut(s)	231, 239, 284, 316, 519, 1401, 1686
BstSFI	CTRYAG	4 cut(s)	404, 840, 1005, 1092
BstSLI	GKGCMC	2 cut(s)	239, 1579
BstUI	CGCG	4 cut(s)	95, 120, 248, 740
BstV1I	GCAGC	8 cut(s)	164, 418, 535, 595, 651, 1019, 1499, 1528
BstX2I	RGATCY	4 cut(s)	1204, 1303, 1535, 1637
BstXI	CCANNNNNNTGG	1 cut(s)	962
BstYI	RGATCY	4 cut(s)	1204, 1303, 1535, 1637
Bsu36I	CCTNAGG	1 cut(s)	801
BsuI	GTATCC	1 cut(s)	814
BsuRI	GGCC	4 cut(s)	244, 269, 1686, 1701
BtgI	CCRYGG	2 cut(s)	246, 328
BtgZI	GCGATG	1 cut(s)	169
BtsCI	GGATG	7 cut(s)	86, 111, 397, 1085, 1113, 1432, 1696
BtsI	GCAGTG	1 cut(s)	401
BtsIMutI	CAGTG	2 cut(s)	401, 622
BveI	ACCTGC	1 cut(s)	445
Cac8I	GCNNGC	6 cut(s)	148, 211, 246, 291, 452, 715
CfoI	GCGC	4 cut(s)	7, 97, 122, 1316
Cfr10I	RCCGGY	2 cut(s)	146, 209
Cfr13I	GGNCC	4 cut(s)	243, 253, 475, 1163
Cfr42I	CCGCGG	1 cut(s)	249
CseI	GACGC	3 cut(s)	126, 169, 1219
Csp6I	GTAC	3 cut(s)	678, 949, 1570
CviQI	GTAC	3 cut(s)	678, 949, 1570
DdeI	CTNAG	5 cut(s)	8, 413, 801, 1059, 1783
DriI	GACNNNNNGTC	1 cut(s)	122
Eam1105I	GACNNNNNGTC	1 cut(s)	122
EciI	GGCGGA	3 cut(s)	133, 331, 340
Ecl136II	GAGCTC	1 cut(s)	1776
Eco130I	CCWWGG	1 cut(s)	1128
Eco147I	AGGCCT	1 cut(s)	1701
Eco24I	GRGCYC	2 cut(s)	318, 1778
Eco32I	GATATC	1 cut(s)	968
Eco47I	GGWCC	3 cut(s)	253, 475, 1163
Eco53kI	GAGCTC	1 cut(s)	1776
Eco81I	CCTNAGG	1 cut(s)	801
Eco88I	CYCGRG	1 cut(s)	555
EcoICRI	GAGCTC	1 cut(s)	1776
EcoNI	CCTNNNNNAGG	1 cut(s)	359
EcoO109I	RGGNCCY	2 cut(s)	253, 475
EcoRI	GAATTC	1 cut(s)	1612
EcoRII	CCWGG	5 cut(s)	231, 239, 284, 519, 1401
EcoRV	GATATC	1 cut(s)	968
EcoT14I	CCWWGG	1 cut(s)	1128
EcoT22I	ATGCAT	1 cut(s)	628
EcoT38I	GRGCYC	2 cut(s)	318, 1778
ErhI	CCWWGG	1 cut(s)	1128
Esp3I	CGTCTC	1 cut(s)	352
FalI	AAGNNNNNCTT	2 cut(s)	798, 830
FaqI	GGGAC	4 cut(s)	545, 734, 1009, 1741
FauI	CCCGC	3 cut(s)	253, 359, 666
FauNDI	CATATG	2 cut(s)	759, 1240
FokI	GGATG	7 cut(s)	73, 98, 384, 1072, 1120, 1439, 1703
FriOI	GRGCYC	2 cut(s)	318, 1778
FspBI	CTAG	1 cut(s)	651
GlaI	GCGC	4 cut(s)	6, 96, 121, 1315
GsuI	CTGGAG	2 cut(s)	268, 1044
HaeII	RGCGCY	2 cut(s)	8, 1317
HaeIII	GGCC	4 cut(s)	244, 269, 1686, 1701
HapII	CCGG	7 cut(s)	147, 198, 210, 273, 318, 1478, 1687
HgaI	GACGC	3 cut(s)	126, 169, 1219
HhaI	GCGC	4 cut(s)	7, 97, 122, 1316
Hin1I	GRCGYC	1 cut(s)	1211
Hin6I	GCGC	4 cut(s)	5, 95, 120, 1314
HinP1I	GCGC	4 cut(s)	5, 95, 120, 1314
HincII	GTYRAC	1 cut(s)	1629
HindII	GTYRAC	1 cut(s)	1629
HindIII	AAGCTT	1 cut(s)	1653
HinfI	GANTC	4 cut(s)	558, 1271, 1278, 1754
HpaII	CCGG	7 cut(s)	147, 198, 210, 273, 318, 1478, 1687
HphI	GGTGA	8 cut(s)	145, 394, 482, 1109, 1328, 1376, 1650, 1763
Hpy166II	GTNNAC	3 cut(s)	620, 1100, 1629
Hpy188I	TCNGA	8 cut(s)	11, 116, 507, 729, 829, 1209, 1540, 1741
Hpy188III	TCNNGA	8 cut(s)	555, 651, 847, 877, 1023, 1275, 1478, 1555
Hpy8I	GTNNAC	3 cut(s)	620, 1100, 1629
Hpy99I	CGWCG	3 cut(s)	120, 128, 266
HpyAV	CCTTC	6 cut(s)	66, 204, 574, 861, 1494, 1691
HpyCH4III	ACNGT	1 cut(s)	1258
HpyF10VI	GCNNNNNNNGC	8 cut(s)	101, 266, 286, 350, 403, 431, 1052, 1516
HpyF3I	CTNAG	5 cut(s)	8, 413, 801, 1059, 1783
Hsp92I	GRCGYC	1 cut(s)	1211
HspAI	GCGC	4 cut(s)	5, 95, 120, 1314
Kpn2I	TCCGGA	1 cut(s)	1477
KroI	GCCGGC	2 cut(s)	146, 209
KroNI	GCCGGC	2 cut(s)	148, 211
KspI	CCGCGG	1 cut(s)	249
LmnI	GCTCC	5 cut(s)	102, 313, 535, 1060, 1087
Lsp1109I	GCAGC	8 cut(s)	164, 418, 535, 595, 651, 1019, 1499, 1528
LweI	GCATC	7 cut(s)	406, 418, 635, 676, 899, 1338, 1716
MaeI	CTAG	1 cut(s)	651
MaeIII	GTNAC	2 cut(s)	847, 1258
MboII	GAAGA	3 cut(s)	1181, 1279, 1493
MflI	RGATCY	4 cut(s)	1204, 1303, 1535, 1637
MhlI	GDGCHC	5 cut(s)	239, 318, 468, 1579, 1778
MlyI	GAGTC	2 cut(s)	567, 1763
MmeI	TCCRAC	4 cut(s)	139, 1141, 1277, 1563
Mph1103I	ATGCAT	1 cut(s)	628
MreI	CGCCGGCG	1 cut(s)	209
MroI	TCCGGA	1 cut(s)	1477
MroNI	GCCGGC	2 cut(s)	146, 209
MseI	TTAA	6 cut(s)	536, 926, 1136, 1344, 1461, 1766
MslI	CAYNNNNRTG	5 cut(s)	69, 750, 960, 1413, 1582
MspA1I	CMGCKG	1 cut(s)	248
MspI	CCGG	7 cut(s)	147, 198, 210, 273, 318, 1478, 1687
MspR9I	CCNGG	7 cut(s)	233, 241, 286, 318, 521, 1403, 1688
MvaI	CCWGG	5 cut(s)	233, 241, 286, 521, 1403
MvnI	CGCG	4 cut(s)	95, 120, 248, 740
MwoI	GCNNNNNNNGC	8 cut(s)	101, 266, 286, 350, 403, 431, 1052, 1516
NaeI	GCCGGC	2 cut(s)	148, 211
NciI	CCSGG	2 cut(s)	318, 1688
NdeI	CATATG	2 cut(s)	759, 1240
NgoMIV	GCCGGC	2 cut(s)	146, 209
NlaIV	GGNNCC	3 cut(s)	238, 315, 1305
NmuCI	GTSAC	2 cut(s)	847, 1258
NsiI	ATGCAT	1 cut(s)	628
NspI	RCATGY	2 cut(s)	626, 1174
PaeR7I	CTCGAG	1 cut(s)	555
PasI	CCCWGGG	1 cut(s)	232
PceI	AGGCCT	1 cut(s)	1701
PcsI	WCGNNNNNNNCGW	1 cut(s)	132
PdiI	GCCGGC	2 cut(s)	148, 211
PfeI	GAWTC	2 cut(s)	1271, 1278
PleI	GAGTC	2 cut(s)	566, 1762
PpsI	GAGTC	2 cut(s)	566, 1762
PpuMI	RGGWCCY	2 cut(s)	253, 475
Psp124BI	GAGCTC	1 cut(s)	1778
Psp5II	RGGWCCY	2 cut(s)	253, 475
Psp6I	CCWGG	5 cut(s)	231, 239, 284, 519, 1401
PspGI	CCWGG	5 cut(s)	231, 239, 284, 519, 1401
PspN4I	GGNNCC	3 cut(s)	238, 315, 1305
PspPI	GGNCC	4 cut(s)	243, 253, 475, 1163
PspPPI	RGGWCCY	2 cut(s)	253, 475
PstI	CTGCAG	2 cut(s)	408, 1009
PsuI	RGATCY	4 cut(s)	1204, 1303, 1535, 1637
RsaI	GTAC	3 cut(s)	679, 950, 1571
RsaNI	GTAC	3 cut(s)	678, 949, 1570
RseI	CAYNNNNRTG	5 cut(s)	69, 750, 960, 1413, 1582
SacI	GAGCTC	1 cut(s)	1778
SacII	CCGCGG	1 cut(s)	249
SaqAI	TTAA	6 cut(s)	536, 926, 1136, 1344, 1461, 1766
Sau96I	GGNCC	4 cut(s)	243, 253, 475, 1163
ScaI	AGTACT	1 cut(s)	950
SchI	GAGTC	2 cut(s)	567, 1763
ScrFI	CCNGG	7 cut(s)	233, 241, 286, 318, 521, 1403, 1688
SduI	GDGCHC	5 cut(s)	239, 318, 468, 1579, 1778
SfaNI	GCATC	7 cut(s)	406, 418, 635, 676, 899, 1338, 1716
SfcI	CTRYAG	4 cut(s)	404, 840, 1005, 1092
Sfr274I	CTCGAG	1 cut(s)	555
Sfr303I	CCGCGG	1 cut(s)	249
SgrAI	CRCCGGYG	1 cut(s)	209
SgrBI	CCGCGG	1 cut(s)	249
SinI	GGWCC	3 cut(s)	253, 475, 1163
SlaI	CTCGAG	1 cut(s)	555
SmiMI	CAYNNNNRTG	5 cut(s)	69, 750, 960, 1413, 1582
SmlI	CTYRAG	2 cut(s)	555, 575
SmoI	CTYRAG	2 cut(s)	555, 575
SseBI	AGGCCT	1 cut(s)	1701
SspI	AATATT	2 cut(s)	1370, 1459
SspMI	CTAG	1 cut(s)	651
SstI	GAGCTC	1 cut(s)	1778
StuI	AGGCCT	1 cut(s)	1701
StyD4I	CCNGG	7 cut(s)	231, 239, 284, 316, 519, 1401, 1686
StyI	CCWWGG	1 cut(s)	1128
TaaI	ACNGT	1 cut(s)	1258
TaqI	TCGA	5 cut(s)	126, 264, 495, 556, 658
TatI	WGTACW	2 cut(s)	948, 1569
TauI	GCSGC	3 cut(s)	64, 272, 1013
TfiI	GAWTC	2 cut(s)	1271, 1278
Tru1I	TTAA	6 cut(s)	536, 926, 1136, 1344, 1461, 1766
Tru9I	TTAA	6 cut(s)	536, 926, 1136, 1344, 1461, 1766
TscAI	CASTG	2 cut(s)	408, 622
TseFI	GTSAC	2 cut(s)	847, 1258
TseI	GCWGC	8 cut(s)	177, 406, 548, 608, 639, 1007, 1487, 1516
Tsp45I	GTSAC	2 cut(s)	847, 1258
TspDTI	ATGAA	5 cut(s)	1008, 1167, 1248, 1257, 1284
TspRI	CASTG	2 cut(s)	408, 622
VpaK11BI	GGWCC	3 cut(s)	253, 475, 1163
XagI	CCTNNNNNAGG	1 cut(s)	359
XapI	RAATTY	3 cut(s)	881, 1324, 1612
XbaI	TCTAGA	1 cut(s)	650
XceI	RCATGY	2 cut(s)	626, 1174
XcmI	CCANNNNNNNNNTGG	1 cut(s)	940
XhoI	CTCGAG	1 cut(s)	555
XspI	CTAG	1 cut(s)	651
ZrmI	AGTACT	1 cut(s)	950
Zsp2I	ATGCAT	1 cut(s)	628

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.