Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0010228

Physical Location & Seq

Genomic Coordinates Forward (+)

49556464 .. 49559814

Gene Structure 3351 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000025969

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGGCGCTCAGAGTTTCTCCTTCTATTCTCTGCAACTGCAACTGCAACGTAACTCCTTCGCATAACAATGCTAACTCACTCTCATCCCACGCGCTCGATGCCTCCTACATCCGACGCGCCGTCGAGCTCGCCGATAAATCCGCCGGCTTCACCTCTCCCCACCCCAACTTCGGCTGCGTCATCGCCACTCCTTCCGGCAAAGTCGCCGGCGAGGGCTTCCTCTACGCCCAGGGCACCAGGCCCGCCGAGGTCCTCGCCGTCGAGGCCGCCGGACAGCTCTCCCGCCAAGCCACCGCTTATCTCAACATGGAGCCCGGCGACTGCCACGGCGACCACTCCGCCGTCTCCGCCCTCGTTCAGGGCGGGGTTGAAAGAGTGGTGATTGGGTTGAGGCATCCACTGCAGCATCTGAGAGGCAATGCCATAAGGGCATTGAGAAGTCAAGGCTTGCAAGTTGAGGTGCTCGGTGAGGACCTTAACAGCAAACTCATCGAGGAAGCTCGGAAGTCGTGCCTGCTGGCTAATGCTCCTTTAATTTGTAGAGCTGCTTCTCGAGTCCCCTTCTCTGTTCTCAAGTTTGCTATGACCCTTGATGGAAAAATTGCTGCTTCCAGTGGACATGCATCATGGATAAGCAGCAAGACATCTAGAAATCGAGTTTTTGAACTGCGGGGTAGAAGTGATGCCATCATTGTAGGGGGAAATACAGCACGCAGGGACAATCCCAGGCTAACTGCGAGGCATGGAGGTGGGCATATGCCCATGCGGATTGTAATGACTCAGACACTTGATCTCCCTGAGGAAGCAAACCTTTGGGATACCTCTGATGTTTCTACTATAGTTGTGACACAAAGGGGTGCGAGAAGGAGTTTCCAGAAATTTCTTGCATCTAAAGGAATTGAAGTCGTGGAGTTTGACATCTTAAACCCCAGAGAAGTAATGGAGTACTTCCATGATCGTGGATATCTTTCAATTTTGTGGGAGTGTGGAGGGACACTATCCGCAGCCGCTATTTCATCTGGAGTAATACATAAGGTCTTTGCTTTTGTTGCTCCTAAGATAATTGGTGGAAAAAATGCTCCATCCCCAGTAGGTGAACTTGGGATGGTTGAAATGACACAAGCCTTGGATTTAATTGATGTTGGCTATGAACAGGTTGGACCTGACATGCTTGTTAGTGGTTTTCTTCAACCCATACCAGATCTGACGCCTGTTATTCCATCAGTTGATGAAACATATGAAATTGATCCAACTGTCACTCTTTATGAATCAAGAATCATATTCTTTTACAAAACATGGGATCCTTATGGCGCTTTCTCAAATTTCTCTCCTCACCCAATTAAGATGCTTGATGTTGATGGTGATTATTCCACTTGGTTGAGTGTAGAGCATTACTACCAGGCTCACAAGTTTGTTGGGGTGGATGATCCTGTGGCACGAGATTGTGTTGAAAATATCAAGTCTGCAAAAAGTCCGGAAGAAGCAGCACGGATAGGAAGGTCAATGCAGAGGCAGCACCCTTATTTGGTAAGATCCGACTGGGAAAGTGTCAAGATTGATGTGATGTACAGGGCACTAAAATGCAAGTTCTCAATATACCCACATTTGAATTCCATGTTGCTGTCAACTACTGGATCTGTTCTTGTTGAAGCTTCACCACATGATCTTTTCTGGGGTGGAGGCCGGGATGGAGAAGGCCTAAATTATTTGGGGAGGCTTTTGATGCAGTTGAGATCAGAGTTTCTTGGTGAGTCCCCTACATTAAGTGAGAGCTCATGCTTAGGGGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004159 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016491 GO:0016627 GO:0016628 GO:0016787 GO:0016798 GO:0016799 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0055114 GO:0071704 GO:0090304 GO:1901135 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko00740 ko01100 ko01110 ko02024 map00740 map01100 map01110 map02024

Pfam Domains

Protein Families

DUF1768 RibD_C dCMP_cyt_deam_1

Protein Analysis

597

Amino Acids

65.09

Weight (kDa)

6.24

Isoelectric Point (pI)

43.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RibD_C	PF01872	188 - 391	5e-42	RibD C-terminal domain
NADAR	PF08719	428 - 581	2.6e-35	NADAR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010228)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47390 AT3G47390
fragaria_vesca	FvH4_6g00440 FvH4_6g00440
malus_domestica	MD04G1245400.v1.1 MD13G1061000.v1.1
prunus_persica	Prupe.6G362000_v2.0.a1
pyrus_communis	pycom04g21610 pycom06g10780 pycom12g23910
rosa_chinensis	RchiOBHm_Chr3g0447811
rosa_laevigata	RLG00000025969
rosa_multiflora	Rmu_co8480445.1_g000001 Rmu_ssc0000391.1_g000018
rosa_roxburghii	Rroxscaffold_6G00426010
rosa_rugosa	Rorug02G0605900
rosa_samantha	Rh3AG005400 Rh3BG005000 Rh3CG005300 Rh3DG005500
rosa_wichuraiana	Rw3G000400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	233
AccII	CGCG	2 cut(s)	92, 117
AccIII	TCCGGA	1 cut(s)	1474
AclWI	GGATC	6 cut(s)	1241, 1295, 1308, 1421, 1527, 1642
AcsI	RAATTY	3 cut(s)	878, 1321, 1609
AcyI	GRCGYC	1 cut(s)	1208
AfaI	GTAC	2 cut(s)	947, 1568
AfiI	CCNNNNNNNGG	3 cut(s)	170, 358, 1525
AgsI	TTSAA	9 cut(s)	371, 665, 902, 972, 1112, 1190, 1451, 1609, 1649
AhdI	GACNNNNNGTC	1 cut(s)	119
AjnI	CCWGG	4 cut(s)	228, 236, 725, 1398
AluBI	AGCT	6 cut(s)	127, 277, 500, 545, 1652, 1773
AluI	AGCT	6 cut(s)	127, 277, 500, 545, 1652, 1773
Alw21I	GWGCWC	3 cut(s)	129, 465, 1775
Alw26I	GTCTC	1 cut(s)	349
AlwI	GGATC	6 cut(s)	1241, 1295, 1308, 1421, 1527, 1642
AlwNI	CAGNNNCTG	1 cut(s)	409
Ama87I	CYCGRG	1 cut(s)	552
Aor13HI	TCCGGA	1 cut(s)	1474
AoxI	GGCC	4 cut(s)	239, 264, 1681, 1696
ApeKI	GCWGC	8 cut(s)	174, 403, 545, 605, 636, 1004, 1484, 1513
ApoI	RAATTY	3 cut(s)	878, 1321, 1609
AspLEI	GCGC	4 cut(s)	7, 94, 119, 1313
AspS9I	GGNCC	4 cut(s)	240, 250, 472, 1160
AsuC2I	CCSGG	2 cut(s)	315, 1685
AsuHPI	GGTGA	8 cut(s)	142, 391, 479, 1106, 1325, 1373, 1647, 1760
AvaI	CYCGRG	1 cut(s)	552
AvaII	GGWCC	3 cut(s)	250, 472, 1160
AxyI	CCTNAGG	1 cut(s)	798
BaeGI	GKGCMC	2 cut(s)	236, 1576
BamHI	GGATCC	1 cut(s)	1300
BanI	GGYRCC	1 cut(s)	233
BanII	GRGCYC	3 cut(s)	129, 315, 1775
BarI	GAAGNNNNNNTAC	2 cut(s)	532, 564
BauI	CACGAG	1 cut(s)	1437
Bbv12I	GWGCWC	3 cut(s)	129, 465, 1775
BbvI	GCAGC	8 cut(s)	161, 415, 532, 592, 648, 1016, 1496, 1525
BccI	CCATC	7 cut(s)	587, 695, 1090, 1099, 1228, 1352, 1682
BceAI	ACGGC	4 cut(s)	104, 242, 326, 343
BcgI	CGANNNNNNTGC	2 cut(s)	472, 506
BciT130I	CCWGG	4 cut(s)	230, 238, 727, 1400
BciVI	GTATCC	1 cut(s)	811
BcnI	CCSGG	2 cut(s)	315, 1685
BcoDI	GTCTC	1 cut(s)	349
BfaI	CTAG	1 cut(s)	648
BfmI	CTRYAG	2 cut(s)	401, 837
BfoI	RGCGCY	2 cut(s)	8, 1314
BfuI	GTATCC	1 cut(s)	811
BglI	GCCNNNNNGGC	2 cut(s)	263, 428
BglII	AGATCT	1 cut(s)	1201
BmcAI	AGTACT	1 cut(s)	947
Bme1390I	CCNGG	6 cut(s)	230, 238, 315, 727, 1400, 1685
Bme18I	GGWCC	3 cut(s)	250, 472, 1160
BmeRI	GACNNNNNGTC	1 cut(s)	119
BmeT110I	CYCGRG	1 cut(s)	552
BmgT120I	GGNCC	4 cut(s)	240, 250, 472, 1160
BmiI	GGNNCC	3 cut(s)	235, 312, 1302
BmrFI	CCNGG	6 cut(s)	230, 238, 315, 727, 1400, 1685
BmrI	ACTGGG	2 cut(s)	1082, 1549
BmsI	GCATC	8 cut(s)	88, 403, 415, 632, 673, 896, 1335, 1713
BmuI	ACTGGG	2 cut(s)	1082, 1549
BpmI	CTGGAG	1 cut(s)	1041
Bpu10I	CCTNAGC	1 cut(s)	1780
BpuEI	CTTGAG	1 cut(s)	557
BpuMI	CCSGG	2 cut(s)	315, 1685
BsaHI	GRCGYC	1 cut(s)	1208
BsaJI	CCNNGG	6 cut(s)	228, 229, 246, 325, 725, 1125
BsaWI	WCCGGW	1 cut(s)	1474
BsaXI	ACNNNNNCTCC	2 cut(s)	777, 807
Bsc4I	CCNNNNNNNGG	3 cut(s)	170, 358, 1525
Bse118I	RCCGGY	2 cut(s)	143, 206
Bse1I	ACTGG	4 cut(s)	612, 1088, 1544, 1636
Bse21I	CCTNAGG	1 cut(s)	798
Bse3DI	GCAATG	1 cut(s)	424
BseAI	TCCGGA	1 cut(s)	1474
BseBI	CCWGG	4 cut(s)	230, 238, 727, 1400
BseDI	CCNNGG	6 cut(s)	228, 229, 246, 325, 725, 1125
BseGI	GGATG	7 cut(s)	83, 108, 394, 1082, 1110, 1429, 1693
BseLI	CCNNNNNNNGG	3 cut(s)	170, 358, 1525
BseMI	GCAATG	1 cut(s)	424
BseMII	CTCAG	4 cut(s)	22, 401, 789, 794
BseNI	ACTGG	4 cut(s)	612, 1088, 1544, 1636
BseRI	GAGGAG	1 cut(s)	1320
BseSI	GKGCMC	2 cut(s)	236, 1576
BseXI	GCAGC	8 cut(s)	161, 415, 532, 592, 648, 1016, 1496, 1525
Bsh1236I	CGCG	2 cut(s)	92, 117
BshFI	GGCC	4 cut(s)	241, 266, 1683, 1698
BshNI	GGYRCC	1 cut(s)	233
BsiHKAI	GWGCWC	3 cut(s)	129, 465, 1775
BsiHKCI	CYCGRG	1 cut(s)	552
BsiSI	CCGG	7 cut(s)	144, 195, 207, 270, 315, 1475, 1684
BslFI	GGGAC	4 cut(s)	542, 731, 1006, 1738
BslI	CCNNNNNNNGG	3 cut(s)	170, 358, 1525
BsmAI	GTCTC	1 cut(s)	349
BsmBI	CGTCTC	1 cut(s)	349
BsmFI	GGGAC	4 cut(s)	542, 731, 1006, 1738
BsnI	GGCC	4 cut(s)	241, 266, 1683, 1698
BsoBI	CYCGRG	1 cut(s)	552
Bsp1286I	GDGCHC	6 cut(s)	129, 236, 315, 465, 1576, 1775
Bsp13I	TCCGGA	1 cut(s)	1474
Bsp1407I	TGTACA	1 cut(s)	1566
BspANI	GGCC	4 cut(s)	241, 266, 1683, 1698
BspCNI	CTCAG	4 cut(s)	21, 402, 790, 793
BspEI	TCCGGA	1 cut(s)	1474
BspFNI	CGCG	2 cut(s)	92, 117
BspLI	GGNNCC	3 cut(s)	235, 312, 1302
BspMAI	CTGCAG	1 cut(s)	405
BspPI	GGATC	6 cut(s)	1241, 1295, 1308, 1421, 1527, 1642
BspT107I	GGYRCC	1 cut(s)	233
BsrDI	GCAATG	1 cut(s)	424
BsrFI	RCCGGY	2 cut(s)	143, 206
BsrGI	TGTACA	1 cut(s)	1566
BsrI	ACTGG	4 cut(s)	612, 1088, 1544, 1636
BssAI	RCCGGY	2 cut(s)	143, 206
BssECI	CCNNGG	6 cut(s)	228, 229, 246, 325, 725, 1125
BssNI	GRCGYC	1 cut(s)	1208
BssSI	CACGAG	1 cut(s)	1437
BssT1I	CCWWGG	1 cut(s)	1125
Bst2BI	CACGAG	1 cut(s)	1437
Bst2UI	CCWGG	4 cut(s)	230, 238, 727, 1400
Bst4CI	ACNGT	1 cut(s)	1255
BstACI	GRCGYC	1 cut(s)	1208
BstAPI	GCANNNNNTGC	1 cut(s)	400
BstAUI	TGTACA	1 cut(s)	1566
BstC8I	GCNNGC	8 cut(s)	129, 145, 208, 243, 449, 515, 519, 712
BstDEI	CTNAG	6 cut(s)	8, 410, 780, 798, 1056, 1780
BstDSI	CCRYGG	1 cut(s)	325
BstENI	CCTNNNNNAGG	1 cut(s)	356
BstF5I	GGATG	7 cut(s)	83, 108, 394, 1082, 1110, 1429, 1693
BstFNI	CGCG	2 cut(s)	92, 117
BstH2I	RGCGCY	2 cut(s)	8, 1314
BstHHI	GCGC	4 cut(s)	7, 94, 119, 1313
BstMAI	GTCTC	1 cut(s)	349
BstMWI	GCNNNNNNNGC	8 cut(s)	98, 263, 347, 400, 428, 1049, 1513, 1723
BstNI	CCWGG	4 cut(s)	230, 238, 727, 1400
BstNSI	RCATGY	2 cut(s)	623, 1171
BstSCI	CCNGG	6 cut(s)	228, 236, 313, 725, 1398, 1683
BstSFI	CTRYAG	2 cut(s)	401, 837
BstSLI	GKGCMC	2 cut(s)	236, 1576
BstUI	CGCG	2 cut(s)	92, 117
BstV1I	GCAGC	8 cut(s)	161, 415, 532, 592, 648, 1016, 1496, 1525
BstX2I	RGATCY	4 cut(s)	1201, 1300, 1532, 1634
BstXI	CCANNNNNNTGG	1 cut(s)	959
BstYI	RGATCY	4 cut(s)	1201, 1300, 1532, 1634
Bsu36I	CCTNAGG	1 cut(s)	798
BsuI	GTATCC	1 cut(s)	811
BsuRI	GGCC	4 cut(s)	241, 266, 1683, 1698
BtgI	CCRYGG	1 cut(s)	325
BtgZI	GCGATG	1 cut(s)	166
BtsCI	GGATG	7 cut(s)	83, 108, 394, 1082, 1110, 1429, 1693
BtsI	GCAGTG	1 cut(s)	398
BtsIMutI	CAGTG	2 cut(s)	398, 619
Cac8I	GCNNGC	8 cut(s)	129, 145, 208, 243, 449, 515, 519, 712
CaiI	CAGNNNCTG	1 cut(s)	409
CfoI	GCGC	4 cut(s)	7, 94, 119, 1313
Cfr10I	RCCGGY	2 cut(s)	143, 206
Cfr13I	GGNCC	4 cut(s)	240, 250, 472, 1160
CseI	GACGC	3 cut(s)	123, 166, 1216
Csp6I	GTAC	2 cut(s)	946, 1567
CviQI	GTAC	2 cut(s)	946, 1567
DdeI	CTNAG	6 cut(s)	8, 410, 780, 798, 1056, 1780
DriI	GACNNNNNGTC	1 cut(s)	119
Eam1105I	GACNNNNNGTC	1 cut(s)	119
EciI	GGCGGA	3 cut(s)	130, 328, 337
Ecl136II	GAGCTC	2 cut(s)	127, 1773
Eco130I	CCWWGG	1 cut(s)	1125
Eco147I	AGGCCT	1 cut(s)	1698
Eco24I	GRGCYC	3 cut(s)	129, 315, 1775
Eco32I	GATATC	1 cut(s)	965
Eco47I	GGWCC	3 cut(s)	250, 472, 1160
Eco53kI	GAGCTC	2 cut(s)	127, 1773
Eco81I	CCTNAGG	1 cut(s)	798
Eco88I	CYCGRG	1 cut(s)	552
EcoICRI	GAGCTC	2 cut(s)	127, 1773
EcoNI	CCTNNNNNAGG	1 cut(s)	356
EcoO109I	RGGNCCY	2 cut(s)	250, 472
EcoRI	GAATTC	1 cut(s)	1609
EcoRII	CCWGG	4 cut(s)	228, 236, 725, 1398
EcoRV	GATATC	1 cut(s)	965
EcoT14I	CCWWGG	1 cut(s)	1125
EcoT22I	ATGCAT	1 cut(s)	625
EcoT38I	GRGCYC	3 cut(s)	129, 315, 1775
ErhI	CCWWGG	1 cut(s)	1125
Esp3I	CGTCTC	1 cut(s)	349
FalI	AAGNNNNNCTT	2 cut(s)	795, 827
FaqI	GGGAC	4 cut(s)	542, 731, 1006, 1738
FauI	CCCGC	4 cut(s)	250, 290, 356, 663
FauNDI	CATATG	2 cut(s)	756, 1237
FokI	GGATG	7 cut(s)	70, 95, 381, 1069, 1117, 1436, 1700
FriOI	GRGCYC	3 cut(s)	129, 315, 1775
FspBI	CTAG	1 cut(s)	648
GlaI	GCGC	4 cut(s)	6, 93, 118, 1312
GsuI	CTGGAG	1 cut(s)	1041
HaeII	RGCGCY	2 cut(s)	8, 1314
HaeIII	GGCC	4 cut(s)	241, 266, 1683, 1698
HapII	CCGG	7 cut(s)	144, 195, 207, 270, 315, 1475, 1684
HgaI	GACGC	3 cut(s)	123, 166, 1216
HhaI	GCGC	4 cut(s)	7, 94, 119, 1313
Hin1I	GRCGYC	1 cut(s)	1208
Hin6I	GCGC	4 cut(s)	5, 92, 117, 1311
HinP1I	GCGC	4 cut(s)	5, 92, 117, 1311
HincII	GTYRAC	1 cut(s)	1626
HindII	GTYRAC	1 cut(s)	1626
HindIII	AAGCTT	1 cut(s)	1650
HinfI	GANTC	5 cut(s)	555, 778, 1268, 1275, 1751
HpaII	CCGG	7 cut(s)	144, 195, 207, 270, 315, 1475, 1684
HphI	GGTGA	8 cut(s)	142, 391, 479, 1106, 1325, 1373, 1647, 1760
Hpy166II	GTNNAC	3 cut(s)	617, 1097, 1626
Hpy188I	TCNGA	9 cut(s)	11, 113, 411, 504, 783, 826, 1206, 1537, 1738
Hpy188III	TCNNGA	7 cut(s)	552, 648, 874, 1020, 1272, 1475, 1552
Hpy8I	GTNNAC	3 cut(s)	617, 1097, 1626
Hpy99I	CGWCG	3 cut(s)	117, 125, 263
HpyAV	CCTTC	7 cut(s)	30, 66, 201, 571, 858, 1491, 1688
HpyCH4III	ACNGT	1 cut(s)	1255
HpyCH4IV	ACGT	1 cut(s)	48
HpyF10VI	GCNNNNNNNGC	8 cut(s)	98, 263, 347, 400, 428, 1049, 1513, 1723
HpyF3I	CTNAG	6 cut(s)	8, 410, 780, 798, 1056, 1780
HpySE526I	ACGT	1 cut(s)	48
Hsp92I	GRCGYC	1 cut(s)	1208
HspAI	GCGC	4 cut(s)	5, 92, 117, 1311
Kpn2I	TCCGGA	1 cut(s)	1474
KroI	GCCGGC	2 cut(s)	143, 206
KroNI	GCCGGC	2 cut(s)	145, 208
LmnI	GCTCC	4 cut(s)	310, 532, 1057, 1084
Lsp1109I	GCAGC	8 cut(s)	161, 415, 532, 592, 648, 1016, 1496, 1525
LweI	GCATC	8 cut(s)	88, 403, 415, 632, 673, 896, 1335, 1713
MaeI	CTAG	1 cut(s)	648
MaeII	ACGT	1 cut(s)	48
MaeIII	GTNAC	3 cut(s)	49, 844, 1255
MboII	GAAGA	2 cut(s)	1178, 1490
MflI	RGATCY	4 cut(s)	1201, 1300, 1532, 1634
MhlI	GDGCHC	6 cut(s)	129, 236, 315, 465, 1576, 1775
MlyI	GAGTC	3 cut(s)	564, 772, 1760
MmeI	TCCRAC	4 cut(s)	136, 1138, 1274, 1560
Mph1103I	ATGCAT	1 cut(s)	625
MreI	CGCCGGCG	1 cut(s)	206
MroI	TCCGGA	1 cut(s)	1474
MroNI	GCCGGC	2 cut(s)	143, 206
MseI	TTAA	6 cut(s)	477, 533, 923, 1133, 1341, 1763
MslI	CAYNNNNRTG	4 cut(s)	66, 747, 957, 1579
MspI	CCGG	7 cut(s)	144, 195, 207, 270, 315, 1475, 1684
MspR9I	CCNGG	6 cut(s)	230, 238, 315, 727, 1400, 1685
MvaI	CCWGG	4 cut(s)	230, 238, 727, 1400
MvnI	CGCG	2 cut(s)	92, 117
MwoI	GCNNNNNNNGC	8 cut(s)	98, 263, 347, 400, 428, 1049, 1513, 1723
NaeI	GCCGGC	2 cut(s)	145, 208
NciI	CCSGG	2 cut(s)	315, 1685
NdeI	CATATG	2 cut(s)	756, 1237
NgoMIV	GCCGGC	2 cut(s)	143, 206
NlaIV	GGNNCC	3 cut(s)	235, 312, 1302
NmeAIII	GCCGAG	1 cut(s)	271
NmuCI	GTSAC	2 cut(s)	844, 1255
NsiI	ATGCAT	1 cut(s)	625
NspI	RCATGY	2 cut(s)	623, 1171
PaeR7I	CTCGAG	1 cut(s)	552
PasI	CCCWGGG	1 cut(s)	229
PceI	AGGCCT	1 cut(s)	1698
PcsI	WCGNNNNNNNCGW	1 cut(s)	129
PdiI	GCCGGC	2 cut(s)	145, 208
PfeI	GAWTC	2 cut(s)	1268, 1275
PleI	GAGTC	3 cut(s)	563, 772, 1759
PpsI	GAGTC	3 cut(s)	563, 772, 1759
PpuMI	RGGWCCY	2 cut(s)	250, 472
Psp124BI	GAGCTC	2 cut(s)	129, 1775
Psp5II	RGGWCCY	2 cut(s)	250, 472
Psp6I	CCWGG	4 cut(s)	228, 236, 725, 1398
PspGI	CCWGG	4 cut(s)	228, 236, 725, 1398
PspN4I	GGNNCC	3 cut(s)	235, 312, 1302
PspPI	GGNCC	4 cut(s)	240, 250, 472, 1160
PspPPI	RGGWCCY	2 cut(s)	250, 472
PstI	CTGCAG	1 cut(s)	405
PstNI	CAGNNNCTG	1 cut(s)	409
PsuI	RGATCY	4 cut(s)	1201, 1300, 1532, 1634
RsaI	GTAC	2 cut(s)	947, 1568
RsaNI	GTAC	2 cut(s)	946, 1567
RseI	CAYNNNNRTG	4 cut(s)	66, 747, 957, 1579
SacI	GAGCTC	2 cut(s)	129, 1775
SaqAI	TTAA	6 cut(s)	477, 533, 923, 1133, 1341, 1763
Sau96I	GGNCC	4 cut(s)	240, 250, 472, 1160
ScaI	AGTACT	1 cut(s)	947
SchI	GAGTC	3 cut(s)	564, 772, 1760
ScrFI	CCNGG	6 cut(s)	230, 238, 315, 727, 1400, 1685
SduI	GDGCHC	6 cut(s)	129, 236, 315, 465, 1576, 1775
SfaNI	GCATC	8 cut(s)	88, 403, 415, 632, 673, 896, 1335, 1713
SfcI	CTRYAG	2 cut(s)	401, 837
Sfr274I	CTCGAG	1 cut(s)	552
SgrAI	CRCCGGYG	1 cut(s)	206
SinI	GGWCC	3 cut(s)	250, 472, 1160
SlaI	CTCGAG	1 cut(s)	552
SmiMI	CAYNNNNRTG	4 cut(s)	66, 747, 957, 1579
SmlI	CTYRAG	2 cut(s)	552, 572
SmoI	CTYRAG	2 cut(s)	552, 572
SseBI	AGGCCT	1 cut(s)	1698
SspMI	CTAG	1 cut(s)	648
SstI	GAGCTC	2 cut(s)	129, 1775
StuI	AGGCCT	1 cut(s)	1698
StyD4I	CCNGG	6 cut(s)	228, 236, 313, 725, 1398, 1683
StyI	CCWWGG	1 cut(s)	1125
TaaI	ACNGT	1 cut(s)	1255
TaiI	ACGT	1 cut(s)	51
TaqI	TCGA	6 cut(s)	96, 123, 261, 492, 553, 655
TatI	WGTACW	2 cut(s)	945, 1566
TauI	GCSGC	2 cut(s)	269, 1010
TfiI	GAWTC	2 cut(s)	1268, 1275
Tru1I	TTAA	6 cut(s)	477, 533, 923, 1133, 1341, 1763
Tru9I	TTAA	6 cut(s)	477, 533, 923, 1133, 1341, 1763
TscAI	CASTG	2 cut(s)	405, 619
TseFI	GTSAC	2 cut(s)	844, 1255
TseI	GCWGC	8 cut(s)	174, 403, 545, 605, 636, 1004, 1484, 1513
Tsp45I	GTSAC	2 cut(s)	844, 1255
TspDTI	ATGAA	5 cut(s)	1005, 1164, 1245, 1254, 1281
TspGWI	ACGGA	1 cut(s)	1504
TspRI	CASTG	2 cut(s)	405, 619
VpaK11BI	GGWCC	3 cut(s)	250, 472, 1160
XagI	CCTNNNNNAGG	1 cut(s)	356
XapI	RAATTY	3 cut(s)	878, 1321, 1609
XbaI	TCTAGA	1 cut(s)	647
XceI	RCATGY	2 cut(s)	623, 1171
XcmI	CCANNNNNNNNNTGG	1 cut(s)	937
XhoI	CTCGAG	1 cut(s)	552
XspI	CTAG	1 cut(s)	648
ZrmI	AGTACT	1 cut(s)	947
Zsp2I	ATGCAT	1 cut(s)	625

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.