Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0010228

Physical Location & Seq

Genomic Coordinates Forward (+)

32100896 .. 32104751

Gene Structure 3856 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1245400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGCATCCAATGGCGGCGTTATCTTTCCCACCAATGCGAGTCTGCTGCGGCGGAGGCGCCGCCACACACAATAGCACTAGTAACAACAACAATTTACTCGGCAACCACGCGTTCGATGCCGCCCACATCCGGCGCGCTGCGGAGCTGGCCGACAGATCCGCCGGATTCACCTCTCCCCACCCAAACTTCGGGTGCGTCATCGCCTCCAAAACCGGAAAAGTCGCCGGCGAGGGCTTCCTCTACGCCCAGGGCACCAAGCCCGCCGAGGTCCTTGCCGTCGATGCAGCTGGCGACTTCTCACGCCGCGCCACCGCTTATCTCAATATGGAGCCCGGTGATTGCCACGGTGACCACTCCGCCGTCTCCGCTCTCGTTCAGGCAGGGATTGAAAGGGTGGTGATTGGGTTGAGGCATCCATTGCAGCATTTAAGAGGGAATGCCATTCGGGCTCTGAGAAGTCAAGGCTTGCAAGTTGATGTTCTTGGTGAGGACCTCAACAGTAAACTCATTGAGGAAGTGCGTAAATCATGCCTGCTTGTCAATGCTCCGTTAATCTGTAGAGCTGCTTCTCGAATCCCCTTCTCTGTTCTCAAGTATGCCATGACTCTTGATGGAAAAATCGCTGCTAGCAGTGGACATGCAGCATGGATCAGCAGCAGAACATCTAGAAATCGAGTTTTTGAACTGCGGGGTAGAAGTGATGCAGTTGTTGTAGGAGGAAATACAGTGCGCAGGGACAATCCAAGACTAACTGCAAGACATGGTGGTGGGCATATGCCTACGCGGATTGTAATGTCACAGACTCTTGATCTCCCTGAGGAAGCACACCTTTGGGATACCTCTGATGTATCTACTATAGTTGCAACACAAAGGGGTGCAAGAAGGCATTTCCAGAAAGTTCTTGCATCTAAAGGAATTGAAGTGGTGGAGTTTGATATCTTAAACCCTAGAGAAGTAATGGAATACTTCCATAATCGCGGATATCTTTCACTTTTGTGGGAGTGTGGAGGGACATTAGCTGCAGCAGCTATTTCATCTGGAGTAATACATAAGGTGTTCGCATTTGTTGCTCCTAAAATTATTGGTGGAAAGAATGCACCATCCCCTGTGGGTGAACTCGGGATGGTTGAAATGACACAAGCCTTTGATCTAATTGATGTCTGCTATGAGCAGGTTGGACCTGATATGCTTGTTGGTGGATTTCTTCAACCCATACCAGATGTGACCCCTGTTATTCCATCAGTTGATGAAACATTTGAAATTGACCCAACTGTGACTCCTTATGAATCAAGGATCATATCCTTCTATAAAACATGGGACCCTTACGGCGCTTTCTCTAATTTTTCACCTCACCAAATTAAGATGCCTGATGACAATGGTGATTATGCAACTTGGTTGAGTGTCGAGCATTACTATCAGGCTCAGAAGTTTGTTGGGGTGGATGATCCTGTGGCACAAGAGTGTGTTGAAAATATTAAGTCTGCCAAAAGTCCGGAAGAGGCAGCACGGATAGGAAGGTCAATGCAGAGGAAGCACCCTGATTTGGTAAGGTCGGACTGGGAAAGTGTCAAGATTGAAGTGATGTATAGAGCACTGAAATGCAAGTTCTCGATATATCCACATTTGAATGCTATGTTGCTCTCAACTGTTGGATCTGTTCTTGTTGAAGCTTCACCGCATGATCTTTTCTGGGGAGGAGGTCGGGATGGAGAAGGCCTAAATTATCTGGGCAGGCTTTTAATGCAGTTGAGATCAGAGTTTCTTGGTGAGTCTCCTACATCCGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004159 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016491 GO:0016627 GO:0016628 GO:0016787 GO:0016798 GO:0016799 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0055114 GO:0071704 GO:0090304 GO:1901135 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko00740 ko01100 ko01110 ko02024 map00740 map01100 map01110 map02024

Pfam Domains

Protein Families

DUF1768 RibD_C dCMP_cyt_deam_1

Protein Analysis

596

Amino Acids

64.86

Weight (kDa)

6.5

Isoelectric Point (pI)

46.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
dCMP_cyt_deam_1	PF00383	40 - 135	5.3e-06	Cytidine and deoxycytidylate deaminase zinc-binding region
RibD_C	PF01872	194 - 397	4e-41	RibD C-terminal domain
NADAR	PF08719	435 - 587	2.5e-35	NADAR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010228)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47390 AT3G47390
fragaria_vesca	FvH4_6g00440 FvH4_6g00440
malus_domestica	MD04G1245400.v1.1 MD13G1061000.v1.1
prunus_persica	Prupe.6G362000_v2.0.a1
pyrus_communis	pycom04g21610 pycom06g10780 pycom12g23910
rosa_chinensis	RchiOBHm_Chr3g0447811
rosa_laevigata	RLG00000025969
rosa_multiflora	Rmu_co8480445.1_g000001 Rmu_ssc0000391.1_g000018
rosa_roxburghii	Rroxscaffold_6G00426010
rosa_rugosa	Rorug02G0605900
rosa_samantha	Rh3AG005400 Rh3BG005000 Rh3CG005300 Rh3DG005500
rosa_wichuraiana	Rw3G000400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	731
Acc36I	ACCTGC	1 cut(s)	1162
AccB1I	GGYRCC	2 cut(s)	56, 251
AccBSI	CCGCTC	1 cut(s)	368
AccII	CGCG	5 cut(s)	110, 135, 306, 784, 978
AccIII	TCCGGA	1 cut(s)	1492
AclWI	GGATC	5 cut(s)	150, 656, 1301, 1439, 1660
AcoI	YGGCCR	1 cut(s)	147
AcyI	GRCGYC	1 cut(s)	57
AfiI	CCNNNNNNNGG	4 cut(s)	129, 188, 1543, 1781
AflIII	ACRYGT	1 cut(s)	108
AhlI	ACTAGT	1 cut(s)	77
AjnI	CCWGG	1 cut(s)	246
AleI	CACNNNNGTG	2 cut(s)	994, 1459
AluBI	AGCT	6 cut(s)	145, 287, 563, 1019, 1028, 1670
AluI	AGCT	6 cut(s)	145, 287, 563, 1019, 1028, 1670
Alw21I	GWGCWC	1 cut(s)	1594
Alw26I	GTCTC	2 cut(s)	367, 1776
AlwI	GGATC	5 cut(s)	150, 656, 1301, 1439, 1660
Ama87I	CYCGRG	1 cut(s)	1118
Aor13HI	TCCGGA	1 cut(s)	1492
AoxI	GGCC	2 cut(s)	147, 1714
AspLEI	GCGC	6 cut(s)	59, 135, 137, 308, 732, 1331
AspS9I	GGNCC	4 cut(s)	268, 490, 1178, 1318
AsuC2I	CCSGG	1 cut(s)	333
AsuNHI	GCTAGC	1 cut(s)	626
AvaI	CYCGRG	1 cut(s)	1118
AvaII	GGWCC	4 cut(s)	268, 490, 1178, 1318
AxyI	CCTNAGG	1 cut(s)	816
BaeGI	GKGCMC	1 cut(s)	254
BanI	GGYRCC	2 cut(s)	56, 251
BanII	GRGCYC	2 cut(s)	333, 451
BarI	GAAGNNNNNNTAC	2 cut(s)	550, 582
Bbv12I	GWGCWC	1 cut(s)	1594
BccI	CCATC	5 cut(s)	605, 1108, 1117, 1246, 1700
BceAI	ACGGC	3 cut(s)	260, 344, 1342
BcgI	CGANNNNNNTGC	4 cut(s)	27, 61, 254, 288
BciT130I	CCWGG	1 cut(s)	248
BciVI	GTATCC	1 cut(s)	829
BcnI	CCSGG	1 cut(s)	333
BcoDI	GTCTC	2 cut(s)	367, 1776
BcuI	ACTAGT	1 cut(s)	77
BfaI	CTAG	4 cut(s)	78, 627, 666, 948
BfmI	CTRYAG	3 cut(s)	556, 855, 1020
BfoI	RGCGCY	2 cut(s)	60, 1332
BfuAI	ACCTGC	1 cut(s)	1162
BfuI	GTATCC	1 cut(s)	829
BglI	GCCNNNNNGGC	1 cut(s)	446
Bme1390I	CCNGG	2 cut(s)	248, 333
Bme18I	GGWCC	4 cut(s)	268, 490, 1178, 1318
BmeT110I	CYCGRG	1 cut(s)	1118
BmgT120I	GGNCC	4 cut(s)	268, 490, 1178, 1318
BmiI	GGNNCC	5 cut(s)	58, 253, 330, 1319, 1320
BmrFI	CCNGG	2 cut(s)	248, 333
BmrI	ACTGGG	1 cut(s)	1567
BmsI	GCATC	7 cut(s)	13, 106, 271, 421, 691, 914, 1353
BmtI	GCTAGC	1 cut(s)	630
BmuI	ACTGGG	1 cut(s)	1567
BpmI	CTGGAG	1 cut(s)	1059
BpuEI	CTTGAG	1 cut(s)	575
BpuMI	CCSGG	1 cut(s)	333
BsaHI	GRCGYC	1 cut(s)	57
BsaJI	CCNNGG	4 cut(s)	246, 247, 264, 343
BsaWI	WCCGGW	3 cut(s)	212, 1492, 1781
BsaXI	ACNNNNNCTCC	2 cut(s)	1261, 1291
Bsc4I	CCNNNNNNNGG	4 cut(s)	129, 188, 1543, 1781
Bse118I	RCCGGY	1 cut(s)	224
Bse1I	ACTGG	1 cut(s)	1562
Bse21I	CCTNAGG	1 cut(s)	816
Bse3DI	GCAATG	1 cut(s)	416
BseAI	TCCGGA	1 cut(s)	1492
BseBI	CCWGG	1 cut(s)	248
BseDI	CCNNGG	4 cut(s)	246, 247, 264, 343
BseGI	GGATG	8 cut(s)	4, 126, 412, 1100, 1128, 1447, 1711, 1778
BseLI	CCNNNNNNNGG	4 cut(s)	129, 188, 1543, 1781
BseMI	GCAATG	1 cut(s)	416
BseMII	CTCAG	3 cut(s)	443, 807, 1436
BseNI	ACTGG	1 cut(s)	1562
BsePI	GCGCGC	1 cut(s)	133
BseRI	GAGGAG	1 cut(s)	1710
BseSI	GKGCMC	1 cut(s)	254
Bsh1236I	CGCG	5 cut(s)	110, 135, 306, 784, 978
BshFI	GGCC	2 cut(s)	149, 1716
BshNI	GGYRCC	2 cut(s)	56, 251
BsiHKAI	GWGCWC	1 cut(s)	1594
BsiHKCI	CYCGRG	1 cut(s)	1118
BsiSI	CCGG	7 cut(s)	130, 162, 213, 225, 333, 1493, 1782
BslFI	GGGAC	3 cut(s)	749, 1024, 1331
BslI	CCNNNNNNNGG	4 cut(s)	129, 188, 1543, 1781
BsmAI	GTCTC	2 cut(s)	367, 1776
BsmBI	CGTCTC	1 cut(s)	367
BsmFI	GGGAC	3 cut(s)	749, 1024, 1331
BsmI	GAATGC	3 cut(s)	442, 1099, 1633
BsnI	GGCC	2 cut(s)	149, 1716
BsoBI	CYCGRG	1 cut(s)	1118
Bsp1286I	GDGCHC	4 cut(s)	254, 333, 451, 1594
Bsp13I	TCCGGA	1 cut(s)	1492
Bsp143I	GATC	9 cut(s)	155, 648, 808, 1147, 1293, 1444, 1652, 1681, 1751
BspANI	GGCC	2 cut(s)	149, 1716
BspCNI	CTCAG	3 cut(s)	444, 808, 1435
BspEI	TCCGGA	1 cut(s)	1492
BspFNI	CGCG	5 cut(s)	110, 135, 306, 784, 978
BspLI	GGNNCC	5 cut(s)	58, 253, 330, 1319, 1320
BspMAI	CTGCAG	1 cut(s)	1024
BspMI	ACCTGC	1 cut(s)	1162
BspOI	GCTAGC	1 cut(s)	630
BspPI	GGATC	5 cut(s)	150, 656, 1301, 1439, 1660
BspT107I	GGYRCC	2 cut(s)	56, 251
BsrBI	CCGCTC	1 cut(s)	368
BsrDI	GCAATG	1 cut(s)	416
BsrFI	RCCGGY	1 cut(s)	224
BsrI	ACTGG	1 cut(s)	1562
BssAI	RCCGGY	1 cut(s)	224
BssECI	CCNNGG	4 cut(s)	246, 247, 264, 343
BssHII	GCGCGC	1 cut(s)	133
BssMI	GATC	9 cut(s)	155, 648, 808, 1147, 1293, 1444, 1652, 1681, 1751
BssNI	GRCGYC	1 cut(s)	57
Bst2UI	CCWGG	1 cut(s)	248
Bst4CI	ACNGT	5 cut(s)	347, 500, 727, 1273, 1648
Bst6I	CTCTTC	1 cut(s)	1491
BstACI	GRCGYC	1 cut(s)	57
BstAPI	GCANNNNNTGC	2 cut(s)	418, 1067
BstC8I	GCNNGC	9 cut(s)	135, 147, 226, 261, 289, 467, 533, 628, 1733
BstDEI	CTNAG	3 cut(s)	452, 816, 1422
BstDSI	CCRYGG	1 cut(s)	343
BstEII	GGTNACC	1 cut(s)	347
BstF5I	GGATG	8 cut(s)	4, 126, 412, 1100, 1128, 1447, 1711, 1778
BstFNI	CGCG	5 cut(s)	110, 135, 306, 784, 978
BstH2I	RGCGCY	2 cut(s)	60, 1332
BstHHI	GCGC	6 cut(s)	59, 135, 137, 308, 732, 1331
BstKTI	GATC	9 cut(s)	158, 651, 811, 1150, 1296, 1447, 1655, 1684, 1754
BstMAI	GTCTC	2 cut(s)	367, 1776
BstMBI	GATC	9 cut(s)	155, 648, 808, 1147, 1293, 1444, 1652, 1681, 1751
BstNI	CCWGG	1 cut(s)	248
BstNSI	RCATGY	1 cut(s)	641
BstPI	GGTNACC	1 cut(s)	347
BstSCI	CCNGG	2 cut(s)	246, 331
BstSFI	CTRYAG	3 cut(s)	556, 855, 1020
BstSLI	GKGCMC	1 cut(s)	254
BstUI	CGCG	5 cut(s)	110, 135, 306, 784, 978
BstX2I	RGATCY	2 cut(s)	155, 1652
BstYI	RGATCY	2 cut(s)	155, 1652
Bsu36I	CCTNAGG	1 cut(s)	816
BsuI	GTATCC	1 cut(s)	829
BsuRI	GGCC	2 cut(s)	149, 1716
BtgI	CCRYGG	1 cut(s)	343
BtgZI	GCGATG	1 cut(s)	184
BtsCI	GGATG	8 cut(s)	4, 126, 412, 1100, 1128, 1447, 1711, 1778
BtsI	GCAGTG	1 cut(s)	637
BtsIMutI	CAGTG	3 cut(s)	637, 732, 1592
BveI	ACCTGC	1 cut(s)	1162
Cac8I	GCNNGC	9 cut(s)	135, 147, 226, 261, 289, 467, 533, 628, 1733
CfoI	GCGC	6 cut(s)	59, 135, 137, 308, 732, 1331
Cfr10I	RCCGGY	1 cut(s)	224
Cfr13I	GGNCC	4 cut(s)	268, 490, 1178, 1318
CseI	GACGC	1 cut(s)	184
CviAII	CATG	7 cut(s)	528, 601, 638, 645, 761, 1314, 1679
DdeI	CTNAG	3 cut(s)	452, 816, 1422
DinI	GGCGCC	1 cut(s)	58
DpnI	GATC	9 cut(s)	157, 650, 810, 1149, 1295, 1446, 1654, 1683, 1753
DpnII	GATC	9 cut(s)	155, 648, 808, 1147, 1293, 1444, 1652, 1681, 1751
EaeI	YGGCCR	1 cut(s)	147
Eam1104I	CTCTTC	1 cut(s)	1491
EarI	CTCTTC	1 cut(s)	1491
EciI	GGCGGA	3 cut(s)	66, 148, 346
Eco147I	AGGCCT	1 cut(s)	1716
Eco24I	GRGCYC	2 cut(s)	333, 451
Eco32I	GATATC	2 cut(s)	937, 983
Eco47I	GGWCC	4 cut(s)	268, 490, 1178, 1318
Eco81I	CCTNAGG	1 cut(s)	816
Eco88I	CYCGRG	1 cut(s)	1118
Eco91I	GGTNACC	1 cut(s)	347
EcoO109I	RGGNCCY	3 cut(s)	268, 490, 1318
EcoO65I	GGTNACC	1 cut(s)	347
EcoRII	CCWGG	1 cut(s)	246
EcoRV	GATATC	2 cut(s)	937, 983
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	2 cut(s)	333, 451
EgeI	GGCGCC	1 cut(s)	58
EheI	GGCGCC	1 cut(s)	58
Esp3I	CGTCTC	1 cut(s)	367
FaeI	CATG	7 cut(s)	531, 604, 641, 648, 764, 1317, 1682
FalI	AAGNNNNNCTT	2 cut(s)	813, 845
FaqI	GGGAC	3 cut(s)	749, 1024, 1331
FatI	CATG	7 cut(s)	527, 600, 637, 644, 760, 1313, 1678
FauI	CCCGC	2 cut(s)	268, 681
FauNDI	CATATG	1 cut(s)	774
FokI	GGATG	7 cut(s)	113, 399, 1087, 1135, 1454, 1718, 1765
FriOI	GRGCYC	2 cut(s)	333, 451
FspBI	CTAG	4 cut(s)	78, 627, 666, 948
FspI	TGCGCA	1 cut(s)	731
GlaI	GCGC	6 cut(s)	58, 134, 136, 307, 731, 1330
GsuI	CTGGAG	1 cut(s)	1059
HaeII	RGCGCY	2 cut(s)	60, 1332
HaeIII	GGCC	2 cut(s)	149, 1716
HapII	CCGG	7 cut(s)	130, 162, 213, 225, 333, 1493, 1782
HgaI	GACGC	1 cut(s)	184
HhaI	GCGC	6 cut(s)	59, 135, 137, 308, 732, 1331
Hin1I	GRCGYC	1 cut(s)	57
Hin1II	CATG	7 cut(s)	531, 604, 641, 648, 764, 1317, 1682
Hin6I	GCGC	6 cut(s)	57, 133, 135, 306, 730, 1329
HinP1I	GCGC	6 cut(s)	57, 133, 135, 306, 730, 1329
HindIII	AAGCTT	1 cut(s)	1668
HinfI	GANTC	8 cut(s)	39, 165, 573, 604, 802, 1276, 1286, 1769
HpaII	CCGG	7 cut(s)	130, 162, 213, 225, 333, 1493, 1782
Hpy166II	GTNNAC	3 cut(s)	503, 635, 1115
Hpy188I	TCNGA	5 cut(s)	453, 844, 1425, 1555, 1756
Hpy8I	GTNNAC	3 cut(s)	503, 635, 1115
Hpy99I	CGWCG	1 cut(s)	281
HpyAV	CCTTC	5 cut(s)	589, 876, 1312, 1509, 1706
HpyCH4III	ACNGT	5 cut(s)	347, 500, 727, 1273, 1648
HpyF3I	CTNAG	3 cut(s)	452, 816, 1422
Hsp92I	GRCGYC	1 cut(s)	57
Hsp92II	CATG	7 cut(s)	531, 604, 641, 648, 764, 1317, 1682
HspAI	GCGC	6 cut(s)	57, 133, 135, 306, 730, 1329
KasI	GGCGCC	1 cut(s)	56
KflI	GGGWCCC	1 cut(s)	1318
Kpn2I	TCCGGA	1 cut(s)	1492
KroI	GCCGGC	1 cut(s)	224
KroNI	GCCGGC	1 cut(s)	226
Kzo9I	GATC	9 cut(s)	155, 648, 808, 1147, 1293, 1444, 1652, 1681, 1751
LmnI	GCTCC	4 cut(s)	142, 328, 550, 1075
LweI	GCATC	7 cut(s)	13, 106, 271, 421, 691, 914, 1353
MaeI	CTAG	4 cut(s)	78, 627, 666, 948
MaeIII	GTNAC	5 cut(s)	80, 347, 795, 1222, 1273
MalI	GATC	9 cut(s)	157, 650, 810, 1149, 1295, 1446, 1654, 1683, 1753
MbiI	CCGCTC	1 cut(s)	368
MboI	GATC	9 cut(s)	155, 648, 808, 1147, 1293, 1444, 1652, 1681, 1751
MboII	GAAGA	2 cut(s)	1196, 1508
MflI	RGATCY	2 cut(s)	155, 1652
MhlI	GDGCHC	4 cut(s)	254, 333, 451, 1594
MluCI	AATT	8 cut(s)	91, 915, 1077, 1152, 1260, 1339, 1356, 1720
MluI	ACGCGT	1 cut(s)	108
Mly113I	GGCGCC	1 cut(s)	57
MlyI	GAGTC	5 cut(s)	48, 598, 796, 1270, 1778
MmeI	TCCRAC	3 cut(s)	1156, 1533, 1630
Mph1103I	ATGCAT	1 cut(s)	6
MreI	CGCCGGCG	1 cut(s)	224
MroI	TCCGGA	1 cut(s)	1492
MroNI	GCCGGC	1 cut(s)	224
MseI	TTAA	6 cut(s)	428, 551, 941, 1359, 1476, 1739
MslI	CAYNNNNRTG	5 cut(s)	765, 994, 1459, 1597, 1626
MspA1I	CMGCKG	1 cut(s)	287
MspI	CCGG	7 cut(s)	130, 162, 213, 225, 333, 1493, 1782
MspR9I	CCNGG	2 cut(s)	248, 333
Mva1269I	GAATGC	3 cut(s)	442, 1099, 1633
MvaI	CCWGG	1 cut(s)	248
MvnI	CGCG	5 cut(s)	110, 135, 306, 784, 978
NaeI	GCCGGC	1 cut(s)	226
NarI	GGCGCC	1 cut(s)	57
NciI	CCSGG	1 cut(s)	333
NdeI	CATATG	1 cut(s)	774
NdeII	GATC	9 cut(s)	155, 648, 808, 1147, 1293, 1444, 1652, 1681, 1751
NgoMIV	GCCGGC	1 cut(s)	224
NheI	GCTAGC	1 cut(s)	626
NlaIII	CATG	7 cut(s)	531, 604, 641, 648, 764, 1317, 1682
NlaIV	GGNNCC	5 cut(s)	58, 253, 330, 1319, 1320
NmeAIII	GCCGAG	2 cut(s)	78, 289
NmuCI	GTSAC	4 cut(s)	347, 795, 1222, 1273
NsbI	TGCGCA	1 cut(s)	731
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	641
OliI	CACNNNNGTG	2 cut(s)	994, 1459
PasI	CCCWGGG	1 cut(s)	247
PauI	GCGCGC	1 cut(s)	133
PceI	AGGCCT	1 cut(s)	1716
PctI	GAATGC	3 cut(s)	442, 1099, 1633
PdiI	GCCGGC	1 cut(s)	226
PfeI	GAWTC	3 cut(s)	165, 573, 1286
PleI	GAGTC	5 cut(s)	47, 598, 796, 1270, 1777
PluTI	GGCGCC	1 cut(s)	60
PpsI	GAGTC	5 cut(s)	47, 598, 796, 1270, 1777
PpuMI	RGGWCCY	3 cut(s)	268, 490, 1318
Psp5II	RGGWCCY	3 cut(s)	268, 490, 1318
Psp6I	CCWGG	1 cut(s)	246
PspEI	GGTNACC	1 cut(s)	347
PspGI	CCWGG	1 cut(s)	246
PspN4I	GGNNCC	5 cut(s)	58, 253, 330, 1319, 1320
PspPI	GGNCC	4 cut(s)	268, 490, 1178, 1318
PspPPI	RGGWCCY	3 cut(s)	268, 490, 1318
PstI	CTGCAG	1 cut(s)	1024
PsuI	RGATCY	2 cut(s)	155, 1652
PteI	GCGCGC	1 cut(s)	133
PvuII	CAGCTG	1 cut(s)	287
RseI	CAYNNNNRTG	5 cut(s)	765, 994, 1459, 1597, 1626
SaqAI	TTAA	6 cut(s)	428, 551, 941, 1359, 1476, 1739
Sau3AI	GATC	9 cut(s)	155, 648, 808, 1147, 1293, 1444, 1652, 1681, 1751
Sau96I	GGNCC	4 cut(s)	268, 490, 1178, 1318
SchI	GAGTC	5 cut(s)	48, 598, 796, 1270, 1778
ScrFI	CCNGG	2 cut(s)	248, 333
SduI	GDGCHC	4 cut(s)	254, 333, 451, 1594
SfaNI	GCATC	7 cut(s)	13, 106, 271, 421, 691, 914, 1353
SfcI	CTRYAG	3 cut(s)	556, 855, 1020
SfoI	GGCGCC	1 cut(s)	58
SgrAI	CRCCGGYG	1 cut(s)	224
SinI	GGWCC	4 cut(s)	268, 490, 1178, 1318
SmiMI	CAYNNNNRTG	5 cut(s)	765, 994, 1459, 1597, 1626
SmlI	CTYRAG	1 cut(s)	590
SmoI	CTYRAG	1 cut(s)	590
SpeI	ACTAGT	1 cut(s)	77
Sse9I	AATT	8 cut(s)	91, 915, 1077, 1152, 1260, 1339, 1356, 1720
SseBI	AGGCCT	1 cut(s)	1716
SspDI	GGCGCC	1 cut(s)	56
SspI	AATATT	1 cut(s)	1474
SspMI	CTAG	4 cut(s)	78, 627, 666, 948
StuI	AGGCCT	1 cut(s)	1716
StyD4I	CCNGG	2 cut(s)	246, 331
TaaI	ACNGT	5 cut(s)	347, 500, 727, 1273, 1648
TaqI	TCGA	6 cut(s)	114, 279, 571, 673, 1404, 1610
TasI	AATT	8 cut(s)	91, 915, 1077, 1152, 1260, 1339, 1356, 1720
TauI	GCSGC	5 cut(s)	17, 51, 62, 122, 306
TfiI	GAWTC	3 cut(s)	165, 573, 1286
Tru1I	TTAA	6 cut(s)	428, 551, 941, 1359, 1476, 1739
Tru9I	TTAA	6 cut(s)	428, 551, 941, 1359, 1476, 1739
TscAI	CASTG	3 cut(s)	637, 732, 1599
TseFI	GTSAC	4 cut(s)	347, 795, 1222, 1273
Tsp45I	GTSAC	4 cut(s)	347, 795, 1222, 1273
TspDTI	ATGAA	3 cut(s)	1023, 1263, 1299
TspGWI	ACGGA	2 cut(s)	537, 1522
TspRI	CASTG	3 cut(s)	637, 732, 1599
VpaK11BI	GGWCC	4 cut(s)	268, 490, 1178, 1318
XbaI	TCTAGA	1 cut(s)	665
XceI	RCATGY	1 cut(s)	641
XspI	CTAG	4 cut(s)	78, 627, 666, 948
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.