FvH4_6g01320
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0011826
Physical Location & Seq
Reverse (-)
717832 .. 722168
4337 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g01320.t1

Sequence Viewer

Length: 3333 bp
ATGGCGAAGATATCGCTGGGTTTGCTGTTTACTATTGTTGCTCTTGTTGCTGCCCTTATGGTTTATGAATCTGAGGGGCTCAATGATGAGGGTCAATACCTTCTAGAAATAAAGAGTAGAATTGTTGATGAATTTGGCCATCTTAGTAGTTGGAATTCCAGTGATTTAACACCTTGTGGATGGAGGGGAGTGGATTGCAGTGAAGGATTGTATCCGGCGGTTTTATCTCTTGACTTGAGTTCCATGAATCTTTCGGGTTCTTTATCTCCAAGCATTGGTAGAATGATTCACCTGAATTATCTTAACCTTTCTTTCAATGAAATGTCTGGGAGTATACCTGAAGACATTGGAAATTGTTCCTATTTGCAGGTTCTTAGTATGAATAACAATAAGTTTGAAGGTCAGATTCCCACAGGATTGGGTAGACTTTCTTATTTAGAAGTCTTGAATGTGTGCAACAATAGAATATCAGGGCCTTTCCCAGAAGAACTTGGAAACCTTTCTTCCCTGTCGCAATTGATTGCATACACTAATAATCTCAGTGGACCACTGCCACATTCTATTGGCAAGCTCAAAAGATTGAAGATTTTCCGGGCAGGAGAGAATTCAATATCAGGAAGCTTACCGTCCGAGATTGGTGATTGTGAAAGCTTGCAGTATCTTGGTCTAGCTCAGAATCAGTTAAGTGGAGAAATTCCGAAAGAGATTGGAATGCTCGAGAATTTGAGTGTTTTAATTCTTTGGGAAAATCTGCTTTCTGGTGTCATTCCAAAGGAGCTTGGCAACTGTACAAATTTGGAAATTCTGGCCCTCTACAAGAACAAGCTTGAAGGAGAGATACCAAGGGAGCTTGGGAGTCTTGTATATCTAGAGAAGCTGTATGTGTACAGAAATATGCTGAATGGGACAGTTCCAAGAGAGATTGGTAATCTTTCTCTCGCTAAGGAGATTGATTTTTCTGAGAATTTGTTGTTTGGAGAGATACCAGTTGAGCTCAGCAAGATATCAGGGTTGCAATTGCTTTACCTTTTCGAGAACCAACTCACAGGTGTTATTCCAGATGAGCTCACAAGCTTGACAAACCTGACAAAGCTCGACCTCTCTATAAATAATCTAACTGGTTCAATTCCAACTGGATTCCAATACATGAATGAGCTGATCATGCTACAGTTGTTTAACAATATGTTGAGTGGCATAATTCCTCAAGGACTTGGGGTGTATAGCCCCCTTTGGGTGGTTGACTTGTCTGATAACTTGCTGACAGGAAGAATTCCTCGGCATGTTTGCAGAAATTCAAATCTGATTTTGCTAAACTTGGGGTCTAACAGGCTCACTGGTAGTATCCCAGATGGGGTCACAAGCTGCAAGTCATTGGTGCAGCTTCGTCTGGTGGGAAACAACCTTACAGGGACTCTTCCAACCGAAATGTGCAAATTGGTTAACCTTTCTGCAGTTGAGTTGGATCAGAACAAGTTCAGCGGTGCCATTCCTCCAGCAATTGGCAACTGCAGAACTTTGCAAAGACTACTGCTTGCAGACAACTACTTTACATCTGAGTTGCCAAGAGAGATTGGTAACCTCTCCCAGTTGGTGATCTTCAATATCTCATCAAATTTGCTTTCTGGAAGGATACCAACTGAGATTTTCAATTGTAAAATGCTTCAACGGCTTGATCTTAGTAGTAACAACTTTTCAGATGTCTTGCCAAGTGAGATAGGAGCACTTTCTCAGTTGGAGCTTCTCAGGCTTTCCGATAACCATTTTGCGGGGGATATCCCAGTTGCACTGGGAAATCTCTTGCGTTTGACTGAGCTACAAATGGGTGGCAACTCGTTCTCAGGGGGTATACCAGCTGAGTTGGGTTCCCTTTCAAGTCTCCAGATCGGATTAAATCTGAGTTATAACAATCTTTCTGGGGAGATACCTTCTCCACTTGGAAATCTTATTTTACTGGAACTGCTTCTACTCAATAACAACCATTTGACTGGTGAAATTCCAGGTTCTTTTGAGAACCTGTCTAGTTTACTTGGCTGCAACTTCTCATACAATGAGTTGATAGGGTCTATTCCTTCTCTACCACTCTTTCAGAATATGGCTGTCAGCAGCTTTATTGGCAACAAAGGACTTTGCGGTGGACCTCTTAGTGCTTGTGAAACGACATCTTCACCCTCTTTTCTTCCAGATGTGCCAAACAGAAGAACCCGCTTGGGGAAGATTATTGCTATTGCTGCAGCAGCCATTGGTGGTGTTTCTCTTATCTTAATCATAATCATTATATCCTTAATGAGACGTCCGGTAGACAATGTAGTAACTTCTGTGCAAGAAAAGTCGCTCTCTTCTCCAGTTTTGGACGTGTATTTTTCGCCAAAGGCAGGATTCACTTTCCAAGACTTGGTTATGGCAACTGACAACTTCGACGAGAACTTTGCAATTGGAAGAGGAGCTTCTGGAACTGTGTATAAAGCCGTCTTGTTTCATGGTGGTCATACAGTTGCTGTCAAGAAGGTAATATCCAACAGGGAAGGGAACAATGTGGATAGTAGCTTTCATGCAGAGATTCTAACTTTGGGAAATATCAGACATAGAAATATTGTGAAGCTGTATGGTTTCTGCTACCACCAGGGTTCCAATCTTCTGCTTTATGAGTACATGGCAAGGGGAAGCTTAGGAGAGTTGCTTCATGGAAAATCATGTAATCTTGACTGGCCAACAAGGTTCAACATTGCTCTAGGGGCTGCCCAGGGTCTCTCTTATCTGCATCATGATTGCAAACCTCGGATCTTTCACCGTGATATTAAGTCCAACAACATTCTCCTTGATGAAAAGTTTGAAGCTCGTGTTGGAGATTTTGGGTTGGCAAAGGTGATTGACATGCCATATTCAAAGTCCATGTCTGCAGTTGCTGGTTCTTATGGATACATTGCCCCCGAGTATGCATACACCATGAAGGTCACAGAAAAATGTGACATCTACAGCTATGGAGTGGTCCTCCTGGAGTTGCTGACTGGCAAAACACCAGTTCAATCGATAGATGAAGGAGGTGACCTGGTAACTTGGGTAAGAAACTTCATTCTCAACAATTCCCTGTCATCAGGAGTCCTCGATGCTCGATTAAGTTTGCATGAACATGAAGATGAAGCTGAAGCTGCTGCTACGGTCTCTCACATGATTACAGTATTGAAAATTGCTATGTTGTGCACAAGCATGTCTCCTTTTGATCGCCCGACCATGAGGGAAGTTGTTTCCATGCTTATTGGGTCGAAGGAGAGAGAAACAGTACAGTTTGCTAATGGTTCCCCAAGTGAGAATGATACAAATTCGGCTGAACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase

Protein Analysis

1111

Amino Acids

120.9

Weight (kDa)

5.15

Isoelectric Point (pI)

33.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 27 - 67 3.3e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 77 - 198 1.1e-12 Leucine-rich repeat region
LRR_14 PF23598 187 - 296 3.8e-10 Leucine-rich repeat region
LRR_14 PF23598 523 - 627 4.6e-10 Leucine-rich repeat region
Pkinase PF00069 810 - 1082 1.1e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 810 - 1083 6.2e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011826)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G63930 AT5G63930
fragaria_vesca FvH4_6g01320 FvH4_6g01320
malus_domestica MD04G1235000.v1.1 MD12G1253000.v1.1
prunus_persica Prupe.6G354900_v2.0.a1 Prupe.6G354900_v2.0.a1
pyrus_communis pycom04g20870 pycom12g23210
rosa_chinensis RchiOBHm_Chr3g0448891
rosa_laevigata RLG00000025869
rosa_multiflora Rmu_co8340729.1_g000001 Rmu_sc0003116.1_g000020
rosa_rugosa Rorug02G0617000
rosa_samantha Rh3AG015200 Rh3CG013900 Rh3DG015500
rosa_wichuraiana Rw3G001130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1902
AatII GACGTC 1 cut(s) 2293
Acc36I ACCTGC 1 cut(s) 358
AccB1I GGYRCC 1 cut(s) 1481
AccB7I CCANNNNNTGG 3 cut(s) 275, 1499, 2392
AccI GTMKAC 4 cut(s) 334, 424, 1846, 2298
AciI CCGC 5 cut(s) 218, 1479, 1766, 2130, 2203
AclWI GGATC 2 cut(s) 1470, 2786
AcoI YGGCCR 2 cut(s) 136, 2705
AcuI CTGAAG 2 cut(s) 360, 3162
AcyI GRCGYC 1 cut(s) 2290
AdeI CACNNNGTG 1 cut(s) 176
AfaI GTAC 4 cut(s) 790, 887, 2648, 3279
AfiI CCNNNNNNNGG 9 cut(s) 275, 1231, 1234, 1351, 1499, 1765, 2208, 2372, 2392
AflIII ACRYGT 1 cut(s) 2352
AjiI CACGTC 1 cut(s) 2353
AjnI CCWGG 5 cut(s) 1996, 2619, 2739, 2991, 3045
AjuI GAANNNNNNNTTGG 2 cut(s) 2823, 2855
Alw21I GWGCWC 4 cut(s) 996, 1068, 1723, 3200
Alw26I GTCTC 5 cut(s) 1880, 2281, 2750, 3163, 3213
Alw44I GTGCAC 1 cut(s) 3196
AlwI GGATC 2 cut(s) 1470, 2786
AlwNI CAGNNNCTG 2 cut(s) 2495, 2903
Ama87I CYCGRG 2 cut(s) 716, 2927
AoxI GGCC 4 cut(s) 136, 473, 807, 2705
ApaLI GTGCAC 1 cut(s) 3196
ArsI GACNNNNNNTTYG 4 cut(s) 2408, 2440, 2876, 2908
Asp700I GAANNNNTTC 5 cut(s) 355, 499, 587, 1472, 1959
AspS9I GGNCC 5 cut(s) 473, 545, 808, 2135, 2986
AsuC2I CCSGG 1 cut(s) 593
AsuHPI GGTGA 8 cut(s) 281, 650, 1603, 2000, 2157, 2777, 2875, 3053
AvaI CYCGRG 2 cut(s) 716, 2927
AvaII GGWCC 3 cut(s) 545, 2135, 2986
BaeGI GKGCMC 1 cut(s) 3200
BalI TGGCCA 2 cut(s) 138, 2707
BanI GGYRCC 1 cut(s) 1481
BanII GRGCYC 3 cut(s) 81, 996, 1068
BarI GAAGNNNNNNTAC 2 cut(s) 822, 854
BauI CACGAG 1 cut(s) 2835
BbsI GAAGAC 1 cut(s) 348
Bbv12I GWGCWC 4 cut(s) 996, 1068, 1723, 3200
BccI CCATC 3 cut(s) 147, 174, 1343
BceAI ACGGC 2 cut(s) 1682, 2450
BcgI CGANNNNNNTGC 2 cut(s) 2408, 2442
BciT130I CCWGG 5 cut(s) 1998, 2621, 2741, 2993, 3047
BciVI GTATCC 4 cut(s) 222, 1352, 1623, 2909
BclI TGATCA 1 cut(s) 1158
BcnI CCSGG 1 cut(s) 593
BcoDI GTCTC 5 cut(s) 1880, 2281, 2750, 3163, 3213
BfaI CTAG 5 cut(s) 104, 668, 869, 2019, 2729
BfmI CTRYAG 6 cut(s) 1166, 1449, 1507, 2229, 2895, 2971
BfuAI ACCTGC 1 cut(s) 358
BfuI GTATCC 4 cut(s) 222, 1352, 1623, 2909
BlpI GCTNAGC 1 cut(s) 995
Bme1390I CCNGG 6 cut(s) 593, 1998, 2621, 2741, 2993, 3047
Bme18I GGWCC 3 cut(s) 545, 2135, 2986
BmeT110I CYCGRG 2 cut(s) 716, 2927
BmgBI CACGTC 1 cut(s) 2353
BmgT120I GGNCC 5 cut(s) 473, 545, 808, 2135, 2986
BmiI GGNNCC 4 cut(s) 1483, 1864, 2626, 3295
BmrFI CCNGG 6 cut(s) 593, 1998, 2621, 2741, 2993, 3047
BmrI ACTGGG 3 cut(s) 1579, 1772, 1796
BmsI GCATC 2 cut(s) 2767, 3094
BmuI ACTGGG 3 cut(s) 1579, 1772, 1796
BpiI GAAGAC 1 cut(s) 348
BplI GAGNNNNNCTC 2 cut(s) 2973, 3005
BpmI CTGGAG 4 cut(s) 1476, 1862, 2325, 3014
Bpu10I CCTNAGC 2 cut(s) 942, 2665
Bpu1102I GCTNAGC 1 cut(s) 995
BpuEI CTTGAG 2 cut(s) 256, 1188
BpuMI CCSGG 1 cut(s) 593
Bsa29I ATCGAT 1 cut(s) 3026
BsaHI GRCGYC 1 cut(s) 2290
BsaI GGTCTC 2 cut(s) 2750, 3163
BsaJI CCNNGG 6 cut(s) 842, 1274, 2620, 2739, 2740, 2774
BsaWI WCCGGW 1 cut(s) 2293
Bsc4I CCNNNNNNNGG 9 cut(s) 275, 1231, 1234, 1351, 1499, 1765, 2208, 2372, 2392
Bse3DI GCAATG 2 cut(s) 2721, 2919
BseBI CCWGG 5 cut(s) 1998, 2621, 2741, 2993, 3047
BseCI ATCGAT 1 cut(s) 3026
BseDI CCNNGG 6 cut(s) 842, 1274, 2620, 2739, 2740, 2774
BseGI GGATG 1 cut(s) 185
BseLI CCNNNNNNNGG 9 cut(s) 275, 1231, 1234, 1351, 1499, 1765, 2208, 2372, 2392
BseMI GCAATG 2 cut(s) 2721, 2919
BseRI GAGGAG 1 cut(s) 2454
BseSI GKGCMC 1 cut(s) 3200
BseYI CCCAGC 1 cut(s) 16
BsgI GTGCAG 1 cut(s) 1397
BshFI GGCC 4 cut(s) 138, 475, 809, 2707
BshNI GGYRCC 1 cut(s) 1481
BshVI ATCGAT 1 cut(s) 3026
BsiHKAI GWGCWC 4 cut(s) 996, 1068, 1723, 3200
BsiHKCI CYCGRG 2 cut(s) 716, 2927
BsiSI CCGG 3 cut(s) 215, 592, 2294
BslFI GGGAC 2 cut(s) 919, 1423
BslI CCNNNNNNNGG 9 cut(s) 275, 1231, 1234, 1351, 1499, 1765, 2208, 2372, 2392
BsmAI GTCTC 5 cut(s) 1880, 2281, 2750, 3163, 3213
BsmBI CGTCTC 1 cut(s) 2281
BsmFI GGGAC 2 cut(s) 919, 1423
BsmI GAATGC 1 cut(s) 717
BsnI GGCC 4 cut(s) 138, 475, 809, 2707
Bso31I GGTCTC 2 cut(s) 2750, 3163
BsoBI CYCGRG 2 cut(s) 716, 2927
Bsp1286I GDGCHC 5 cut(s) 81, 996, 1068, 1723, 3200
Bsp1407I TGTACA 2 cut(s) 788, 885
Bsp143I GATC 7 cut(s) 1158, 1462, 1593, 1672, 1881, 2778, 3217
Bsp1720I GCTNAGC 1 cut(s) 995
BspACI CCGC 5 cut(s) 218, 1479, 1766, 2130, 2203
BspANI GGCC 4 cut(s) 138, 475, 809, 2707
BspDI ATCGAT 1 cut(s) 3026
BspHI TCATGA 1 cut(s) 2761
BspLI GGNNCC 4 cut(s) 1483, 1864, 2626, 3295
BspMAI CTGCAG 4 cut(s) 1453, 1511, 2233, 2899
BspMI ACCTGC 1 cut(s) 358
BspPI GGATC 2 cut(s) 1470, 2786
BspT107I GGYRCC 1 cut(s) 1481
BspTNI GGTCTC 2 cut(s) 2750, 3163
BsrDI GCAATG 2 cut(s) 2721, 2919
BsrGI TGTACA 2 cut(s) 788, 885
BssECI CCNNGG 6 cut(s) 842, 1274, 2620, 2739, 2740, 2774
BssMI GATC 7 cut(s) 1158, 1462, 1593, 1672, 1881, 2778, 3217
BssNAI GTATAC 2 cut(s) 335, 1847
BssNI GRCGYC 1 cut(s) 2290
BssSI CACGAG 1 cut(s) 2835
BssT1I CCWWGG 1 cut(s) 842
Bst1107I GTATAC 2 cut(s) 335, 1847
Bst2BI CACGAG 1 cut(s) 2835
Bst2UI CCWGG 5 cut(s) 1998, 2621, 2741, 2993, 3047
Bst6I CTCTTC 3 cut(s) 1419, 2341, 2431
BstACI GRCGYC 1 cut(s) 2290
BstAUI TGTACA 2 cut(s) 788, 885
BstC8I GCNNGC 3 cut(s) 569, 653, 1533
BstEII GGTNACC 2 cut(s) 1574, 3041
BstF5I GGATG 1 cut(s) 185
BstKTI GATC 7 cut(s) 1161, 1465, 1596, 1675, 1884, 2781, 3220
BstMAI GTCTC 5 cut(s) 1880, 2281, 2750, 3163, 3213
BstMBI GATC 7 cut(s) 1158, 1462, 1593, 1672, 1881, 2778, 3217
BstNI CCWGG 5 cut(s) 1998, 2621, 2741, 2993, 3047
BstNSI RCATGY 3 cut(s) 1283, 2875, 3208
BstPI GGTNACC 2 cut(s) 1574, 3041
BstSCI CCNGG 6 cut(s) 591, 1996, 2619, 2739, 2991, 3045
BstSFI CTRYAG 6 cut(s) 1166, 1449, 1507, 2229, 2895, 2971
BstSLI GKGCMC 1 cut(s) 3200
BstV2I GAAGAC 1 cut(s) 348
BstX2I RGATCY 1 cut(s) 2778
BstXI CCANNNNNNTGG 2 cut(s) 418, 1985
BstYI RGATCY 1 cut(s) 2778
BstZ17I GTATAC 2 cut(s) 335, 1847
Bsu15I ATCGAT 1 cut(s) 3026
BsuI GTATCC 4 cut(s) 222, 1352, 1623, 2909
BsuRI GGCC 4 cut(s) 138, 475, 809, 2707
BsuTUI ATCGAT 1 cut(s) 3026
BtrI CACGTC 1 cut(s) 2353
BtsCI GGATG 1 cut(s) 185
BtsI GCAGTG 2 cut(s) 205, 548
BtsIMutI CAGTG 6 cut(s) 166, 205, 547, 548, 1332, 1784
BveI ACCTGC 1 cut(s) 358
Cac8I GCNNGC 3 cut(s) 569, 653, 1533
CaiI CAGNNNCTG 2 cut(s) 2495, 2903
CciI TCATGA 1 cut(s) 2761
Cfr13I GGNCC 5 cut(s) 473, 545, 808, 2135, 2986
ClaI ATCGAT 1 cut(s) 3026
CsiI ACCWGGT 1 cut(s) 3045
Csp6I GTAC 4 cut(s) 789, 886, 2647, 3278
CviQI GTAC 4 cut(s) 789, 886, 2647, 3278
DpnI GATC 7 cut(s) 1160, 1464, 1595, 1674, 1883, 2780, 3219
DpnII GATC 7 cut(s) 1158, 1462, 1593, 1672, 1881, 2778, 3217
DraIII CACNNNGTG 1 cut(s) 176
EaeI YGGCCR 2 cut(s) 136, 2705
Eam1104I CTCTTC 3 cut(s) 1419, 2341, 2431
EarI CTCTTC 3 cut(s) 1419, 2341, 2431
Ecl136II GAGCTC 2 cut(s) 994, 1066
Eco130I CCWWGG 1 cut(s) 842
Eco24I GRGCYC 3 cut(s) 81, 996, 1068
Eco31I GGTCTC 2 cut(s) 2750, 3163
Eco32I GATATC 3 cut(s) 12, 1005, 1774
Eco47I GGWCC 3 cut(s) 545, 2135, 2986
Eco53kI GAGCTC 2 cut(s) 994, 1066
Eco57I CTGAAG 2 cut(s) 360, 3162
Eco88I CYCGRG 2 cut(s) 716, 2927
Eco91I GGTNACC 2 cut(s) 1574, 3041
EcoICRI GAGCTC 2 cut(s) 994, 1066
EcoO109I RGGNCCY 1 cut(s) 473
EcoO65I GGTNACC 2 cut(s) 1574, 3041
EcoRI GAATTC 3 cut(s) 154, 604, 1269
EcoRII CCWGG 5 cut(s) 1996, 2619, 2739, 2991, 3045
EcoRV GATATC 3 cut(s) 12, 1005, 1774
EcoT14I CCWWGG 1 cut(s) 842
EcoT22I ATGCAT 1 cut(s) 2938
EcoT38I GRGCYC 3 cut(s) 81, 996, 1068
ErhI CCWWGG 1 cut(s) 842
Esp3I CGTCTC 1 cut(s) 2281
FalI AAGNNNNNCTT 2 cut(s) 2428, 2460
FaqI GGGAC 2 cut(s) 919, 1423
FauI CCCGC 2 cut(s) 1759, 2210
FbaI TGATCA 1 cut(s) 1158
FblI GTMKAC 4 cut(s) 334, 424, 1846, 2298
FokI GGATG 1 cut(s) 192
FriOI GRGCYC 3 cut(s) 81, 996, 1068
FspBI CTAG 5 cut(s) 104, 668, 869, 2019, 2729
GsaI CCCAGC 1 cut(s) 20
GsuI CTGGAG 4 cut(s) 1476, 1862, 2325, 3014
HaeIII GGCC 4 cut(s) 138, 475, 809, 2707
HapII CCGG 3 cut(s) 215, 592, 2294
Hin1I GRCGYC 1 cut(s) 2290
HincII GTYRAC 2 cut(s) 1240, 1441
HindII GTYRAC 2 cut(s) 1240, 1441
HindIII AAGCTT 5 cut(s) 619, 649, 824, 1072, 2662
HpaI GTTAAC 1 cut(s) 1441
HpaII CCGG 3 cut(s) 215, 592, 2294
HphI GGTGA 8 cut(s) 281, 650, 1603, 2000, 2157, 2777, 2875, 3053
Hpy99I CGWCG 1 cut(s) 2420
HpyCH4IV ACGT 2 cut(s) 2290, 2352
HpySE526I ACGT 2 cut(s) 2290, 2352
Hsp92I GRCGYC 1 cut(s) 2290
Ksp22I TGATCA 1 cut(s) 1158
KspAI GTTAAC 1 cut(s) 1441
Kzo9I GATC 7 cut(s) 1158, 1462, 1593, 1672, 1881, 2778, 3217
LmnI GCTCC 5 cut(s) 775, 847, 1718, 1735, 2441
LweI GCATC 2 cut(s) 2767, 3094
MabI ACCWGGT 1 cut(s) 3045
MaeI CTAG 5 cut(s) 104, 668, 869, 2019, 2729
MaeII ACGT 2 cut(s) 2290, 2352
MaeIII GTNAC 8 cut(s) 1354, 1574, 1682, 2308, 2950, 2963, 3041, 3049
MalI GATC 7 cut(s) 1160, 1464, 1595, 1674, 1883, 2780, 3219
MboI GATC 7 cut(s) 1158, 1462, 1593, 1672, 1881, 2778, 3217
MfeI CAATTG 5 cut(s) 515, 1016, 1497, 1648, 2430
MflI RGATCY 1 cut(s) 2778
MhlI GDGCHC 5 cut(s) 81, 996, 1068, 1723, 3200
MlsI TGGCCA 2 cut(s) 138, 2707
MluNI TGGCCA 2 cut(s) 138, 2707
MlyI GAGTC 3 cut(s) 865, 1405, 3105
MmeI TCCRAC 8 cut(s) 131, 1154, 1440, 1442, 1713, 2538, 2821, 2826
Mox20I TGGCCA 2 cut(s) 138, 2707
Mph1103I ATGCAT 1 cut(s) 2938
MroXI GAANNNNTTC 5 cut(s) 355, 499, 587, 1472, 1959
MscI TGGCCA 2 cut(s) 138, 2707
MslI CAYNNNNRTG 3 cut(s) 3126, 3132, 3203
Msp20I TGGCCA 2 cut(s) 138, 2707
MspA1I CMGCKG 2 cut(s) 1479, 1853
MspI CCGG 3 cut(s) 215, 592, 2294
MspR9I CCNGG 6 cut(s) 593, 1998, 2621, 2741, 2993, 3047
MunI CAATTG 5 cut(s) 515, 1016, 1497, 1648, 2430
Mva1269I GAATGC 1 cut(s) 717
MvaI CCWGG 5 cut(s) 1998, 2621, 2741, 2993, 3047
NciI CCSGG 1 cut(s) 593
NdeII GATC 7 cut(s) 1158, 1462, 1593, 1672, 1881, 2778, 3217
NlaIV GGNNCC 4 cut(s) 1483, 1864, 2626, 3295
NmeAIII GCCGAG 1 cut(s) 1255
NmuCI GTSAC 4 cut(s) 1354, 2950, 2963, 3041
NsiI ATGCAT 1 cut(s) 2938
NspI RCATGY 3 cut(s) 1283, 2875, 3208
PaeR7I CTCGAG 1 cut(s) 716
PagI TCATGA 1 cut(s) 2761
PasI CCCWGGG 1 cut(s) 2740
PctI GAATGC 1 cut(s) 717
PdmI GAANNNNTTC 5 cut(s) 355, 499, 587, 1472, 1959
PfeI GAWTC 8 cut(s) 68, 247, 286, 406, 676, 1137, 2376, 2557
PflMI CCANNNNNTGG 3 cut(s) 275, 1499, 2392
PfoI TCCNGGA 1 cut(s) 2991
PleI GAGTC 3 cut(s) 864, 1405, 3104
PpsI GAGTC 3 cut(s) 864, 1405, 3104
PsiI TTATAA 1 cut(s) 1902
Psp124BI GAGCTC 2 cut(s) 996, 1068
Psp6I CCWGG 5 cut(s) 1996, 2619, 2739, 2991, 3045
PspEI GGTNACC 2 cut(s) 1574, 3041
PspFI CCCAGC 1 cut(s) 16
PspGI CCWGG 5 cut(s) 1996, 2619, 2739, 2991, 3045
PspN4I GGNNCC 4 cut(s) 1483, 1864, 2626, 3295
PspPI GGNCC 5 cut(s) 473, 545, 808, 2135, 2986
PsrI GAACNNNNNNTAC 2 cut(s) 1947, 1979
PstI CTGCAG 4 cut(s) 1453, 1511, 2233, 2899
PstNI CAGNNNCTG 2 cut(s) 2495, 2903
PsuI RGATCY 1 cut(s) 2778
PvuII CAGCTG 1 cut(s) 1853
RsaI GTAC 4 cut(s) 790, 887, 2648, 3279
RsaNI GTAC 4 cut(s) 789, 886, 2647, 3278
RseI CAYNNNNRTG 3 cut(s) 3126, 3132, 3203
SacI GAGCTC 2 cut(s) 996, 1068
Sau3AI GATC 7 cut(s) 1158, 1462, 1593, 1672, 1881, 2778, 3217
Sau96I GGNCC 5 cut(s) 473, 545, 808, 2135, 2986
SchI GAGTC 3 cut(s) 865, 1405, 3105
ScrFI CCNGG 6 cut(s) 593, 1998, 2621, 2741, 2993, 3047
SduI GDGCHC 5 cut(s) 81, 996, 1068, 1723, 3200
SexAI ACCWGGT 1 cut(s) 3045
SfaNI GCATC 2 cut(s) 2767, 3094
SfcI CTRYAG 6 cut(s) 1166, 1449, 1507, 2229, 2895, 2971
Sfr274I CTCGAG 1 cut(s) 716
SinI GGWCC 3 cut(s) 545, 2135, 2986
SlaI CTCGAG 1 cut(s) 716
SmiMI CAYNNNNRTG 3 cut(s) 3126, 3132, 3203
SmlI CTYRAG 3 cut(s) 235, 716, 1203
SmoI CTYRAG 3 cut(s) 235, 716, 1203
SsiI CCGC 5 cut(s) 218, 1479, 1766, 2130, 2203
SspI AATATT 1 cut(s) 2590
SspMI CTAG 5 cut(s) 104, 668, 869, 2019, 2729
SstI GAGCTC 2 cut(s) 996, 1068
StyD4I CCNGG 6 cut(s) 591, 1996, 2619, 2739, 2991, 3045
StyI CCWWGG 1 cut(s) 842
TaiI ACGT 2 cut(s) 2293, 2355
TaqI TCGA 8 cut(s) 717, 1032, 1095, 2415, 3026, 3102, 3109, 3260
TatI WGTACW 4 cut(s) 788, 885, 2646, 3277
TfiI GAWTC 8 cut(s) 68, 247, 286, 406, 676, 1137, 2376, 2557
TscAI CASTG 6 cut(s) 166, 205, 547, 555, 1339, 1791
TseFI GTSAC 4 cut(s) 1354, 2950, 2963, 3041
Tsp45I GTSAC 4 cut(s) 1354, 2950, 2963, 3041
TspRI CASTG 6 cut(s) 166, 205, 547, 555, 1339, 1791
Van91I CCANNNNNTGG 3 cut(s) 275, 1499, 2392
VneI GTGCAC 1 cut(s) 3196
VpaK11BI GGWCC 3 cut(s) 545, 2135, 2986
XbaI TCTAGA 2 cut(s) 103, 868
XceI RCATGY 3 cut(s) 1283, 2875, 3208
XhoI CTCGAG 1 cut(s) 716
XmiI GTMKAC 4 cut(s) 334, 424, 1846, 2298
XmnI GAANNNNTTC 5 cut(s) 355, 499, 587, 1472, 1959
XspI CTAG 5 cut(s) 104, 668, 869, 2019, 2729
ZraI GACGTC 1 cut(s) 2291
Zsp2I ATGCAT 1 cut(s) 2938
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.