FvH4_6g07610

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0013694
Physical Location & Seq
Forward (+)
4554215 .. 4556236
2022 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g07610.t1

Sequence Viewer

Length: 2022 bp
ATGAGCACAACCACCACCACCACCACCACCACAAACCTTCCTCATCACGTCAAACCAAAACAAGCCTCACCAGAATCAAAACCACCCACCTTCAAACTCTCCCAGAAAACAATCTTACACATCTTGAACTCAAAATGCACCACTTCTCTACAAAACCTCAAGCAAGCACATGGTGTTGTCCTAAGGTCAGGCCACTTCCAAGACCACTATGTAGCAGGCACCATACTAAAATGCTATGCAAGTTCAAACTTCAACAACTTTGGGTTTGCTTTGAAGGTGTTTGATAATGTGTGGAAGCCAAATGTGTTTGTATGGAACATTATGATCAAAGGGTGTGTGGAGAACTATGAGGCACTGAAATCTATTTCATTTTATTATAAGATGGTGGATATGAACTCCAGGCCTAATAAGTTCACCTATCCTATGTTGTTCAAGGCCTGCAGATTAGTTCAAGCAGTGGAGGAAGGTCTGCAGATTCATGCACACGTGGTGAAGCAACAACTTAGTGAAGATGGGCACATAAGAAGTGCCGGGATTCAAATGTATGCGTCTTTCGGGCTTGTGGAGGAGGCAAGGAGGATACTGCTAGAGGACGCGGCGTCTGATGTTGTTTGTTGGAATGCAATGATTGATGGGTACATAAAGTGTGGGGATGTGGAAGCAGCTAAGGAGTTGTTTGAGCATATGCCAAGTAAGAATGTTGGGTCTTGGAATGCAATGGTGAGTGGTTTCGCTAGGTGTGGGAGGTTGAAAGATGCAAGGGGGCTGTTTGATTCAATGACCGAGAGAGATGAGATTTCGTGGAGTGCTATGATTGATGGATATGTGCAGGGAGGGTACCACAAGGAGGCATTGGAAGTTTTCAATGAGATGCAAAAGGAGAAGATTGCTAGTCCTAGTAAGTTTGTATTGTCGAGTGTGTTAGCTGCTTGTGCTAATGTGGGAGCACTTGATCAAGGAAAGTGGGTTCATGGTTATATTAAGAAGAACTCAATTCAGGTGGATGCAGTGCTGGGGACTGCTTTAGTTGATATGTATGCCAAATGTGGGAGGCTTGACATGGCATGGGAAGTGTTTGAAAATGTAAAACGGAAAGAGGTTTCGACATGGAATGCCATGATTGGTGGGCTTGCTATGCACGGCCGAGCAGATGATGCATTGGATGTTTTCTTCAAGATGCAAGGGAAGAACTTGGAACCAAATGGGATTACATTTCTGAATGCTCTAAGTGCCTGTGCTCATGGGGAGTTTGTTGATGAAGGTCTTACAATTTTCAGTTCTATGAAGGAAATGTATGGTATGGAGGCTGAGGTAGAGCACTATGGTTGCGTTGTTGATATGTTTGGAAGGGCAGGACTTTTGGAAGAGGCAGAGCAGGTTATAAATTCAATGCCAATTGAACCTAGTGCAGCTGTTTATGGTGCCCTGTTGGGAGCTTGCAGGATACATGGAAATGTTGAAATGGGTGAGAGAGTGGGGAGGATTTTGCTTGAATTGGAACCACAAAATGGTGGACGCTACGCATTGTTATCTAACATCTATGCAGAGGCAGGTATGTGGGATGATGTTGCAGAGGTAAGAAAATTGATGAAGGAAAGGGGAGTGAAAACAAATCCTGGAATCAGCATGGTTGATATTGGTGGCAAAGTGCATGAATTCAAAATGGGAGAAGGGTCACACCCACAAATGAAGGAGGTCTACTTGATGCTTGAGAAGATCATAGAAAAGCTGGAGATGGAGGGTTATTCACCGAATACCTCTGAAGTTTTGTTCGACATTGCAGAGGAGGAGAAGGAAACAGCACTACGATACCACAGTGAGAAGCTTGCAATTGCTTTCGGAGTACTCAAAACGAAACCAGGAACAACCATCCGTGTTGTGAAGAACTTGAGGATTTGTGAGGACTGTCATTCTGCCATAAAGCTGTTTTCACAATTAGACAACCGGGATATAATAGTGAGGGACCGTATGCGCTATCATCATTTCAGAAATGGAAGATGTTCGTGCAAGGATTTTTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

674

Amino Acids

75.44

Weight (kDa)

6.44

Isoelectric Point (pI)

37.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 100 - 147 8.2e-08 PPR repeat family
PPR_2 PF13041 202 - 234 8.7e-09 PPR repeat family
PPR_1 PF12854 202 - 229 5.6e-06 PPR repeat
PPR PF01535 204 - 234 2.5e-08 PPR repeat
PPR PF01535 236 - 263 2e-06 PPR repeat
PPR_2 PF13041 264 - 313 1.3e-07 PPR repeat family
PPR PF01535 266 - 295 1.4e-08 PPR repeat
PPR_2 PF13041 367 - 413 8e-09 PPR repeat family
PPR PF01535 368 - 397 4.1e-07 PPR repeat
E_motif PF20431 483 - 544 3.2e-21 E motif
DYW_deaminase PF14432 581 - 673 1.8e-40 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 378, 1382
Acc36I ACCTGC 2 cut(s) 1366, 1541
Acc65I GGTACC 1 cut(s) 837
AccB1I GGYRCC 3 cut(s) 218, 837, 1421
AccB7I CCANNNNNTGG 1 cut(s) 1508
AccI GTMKAC 1 cut(s) 1698
AccII CGCG 1 cut(s) 596
AciI CCGC 1 cut(s) 596
AcoI YGGCCR 1 cut(s) 1141
AcsI RAATTY 2 cut(s) 1384, 1655
AcuI CTGAAG 1 cut(s) 1782
AcvI CACGTG 1 cut(s) 487
AcyI GRCGYC 1 cut(s) 599
AdeI CACNNNGTG 2 cut(s) 173, 490
AfaI GTAC 3 cut(s) 638, 839, 1845
AfiI CCNNNNNNNGG 3 cut(s) 847, 1047, 1508
AflIII ACRYGT 1 cut(s) 484
AhdI GACNNNNNGTC 1 cut(s) 598
AjiI CACGTC 1 cut(s) 49
AjnI CCWGG 3 cut(s) 398, 1615, 1858
AloI GAACNNNNNNTCC 2 cut(s) 951, 983
AluBI AGCT 7 cut(s) 665, 926, 1412, 1436, 1729, 1825, 1924
AluI AGCT 7 cut(s) 665, 926, 1412, 1436, 1729, 1825, 1924
Alw21I GWGCWC 4 cut(s) 8, 949, 1240, 1320
AoxI GGCC 4 cut(s) 190, 401, 435, 1141
ApeKI GCWGC 3 cut(s) 662, 926, 1409
ApoI RAATTY 2 cut(s) 1384, 1655
Asp700I GAANNNNTTC 1 cut(s) 1999
Asp718I GGTACC 1 cut(s) 837
AspLEI GCGC 1 cut(s) 1974
AspS9I GGNCC 1 cut(s) 1963
AsuC2I CCSGG 2 cut(s) 532, 1946
AsuHPI GGTGA 6 cut(s) 60, 406, 502, 733, 1478, 1740
AvaII GGWCC 1 cut(s) 1963
AxyI CCTNAGG 1 cut(s) 182
BaeGI GKGCMC 2 cut(s) 519, 1426
BaeI ACNNNNGTAYC 2 cut(s) 1801, 1834
BanI GGYRCC 3 cut(s) 218, 837, 1421
BarI GAAGNNNNNNTAC 2 cut(s) 1682, 1714
BbrPI CACGTG 1 cut(s) 487
Bbv12I GWGCWC 4 cut(s) 8, 949, 1240, 1320
BbvCI CCTCAGC 1 cut(s) 1308
BbvI GCAGC 3 cut(s) 674, 913, 1421
BccI CCATC 6 cut(s) 376, 506, 626, 812, 1729, 1877
BceAI ACGGC 1 cut(s) 1156
BciT130I CCWGG 3 cut(s) 400, 1617, 1860
BciVI GTATCC 2 cut(s) 573, 1437
BclI TGATCA 2 cut(s) 324, 952
BcnI CCSGG 2 cut(s) 532, 1946
BfaI CTAG 5 cut(s) 587, 735, 891, 897, 1404
BfmI CTRYAG 2 cut(s) 439, 470
BfuAI ACCTGC 2 cut(s) 1366, 1541
BfuI GTATCC 2 cut(s) 573, 1437
BisI GCNGC 4 cut(s) 597, 663, 927, 1410
BlsI GCNGC 4 cut(s) 598, 664, 928, 1411
BmcAI AGTACT 1 cut(s) 1845
Bme1390I CCNGG 5 cut(s) 400, 532, 1617, 1860, 1946
Bme18I GGWCC 1 cut(s) 1963
BmeRI GACNNNNNGTC 1 cut(s) 598
BmgBI CACGTC 1 cut(s) 49
BmgT120I GGNCC 1 cut(s) 1963
BmiI GGNNCC 6 cut(s) 220, 839, 1197, 1423, 1500, 1964
BmrFI CCNGG 5 cut(s) 400, 532, 1617, 1860, 1946
BmsI GCATC 6 cut(s) 745, 861, 994, 1144, 1167, 1695
BpmI CTGGAG 2 cut(s) 382, 1751
Bpu10I CCTNAGC 2 cut(s) 666, 1308
BpuEI CTTGAG 3 cut(s) 143, 1730, 1909
BpuMI CCSGG 2 cut(s) 532, 1946
BsaAI YACGTR 1 cut(s) 487
BsaHI GRCGYC 1 cut(s) 599
Bsc4I CCNNNNNNNGG 3 cut(s) 847, 1047, 1508
Bse21I CCTNAGG 1 cut(s) 182
Bse3DI GCAATG 3 cut(s) 630, 723, 1776
BseBI CCWGG 3 cut(s) 400, 1617, 1860
BseGI GGATG 5 cut(s) 658, 1009, 1168, 1567, 1869
BseLI CCNNNNNNNGG 3 cut(s) 847, 1047, 1508
BseMI GCAATG 3 cut(s) 630, 723, 1776
BseMII CTCAG 1 cut(s) 1299
BseRI GAGGAG 3 cut(s) 581, 1799, 1802
BseSI GKGCMC 2 cut(s) 519, 1426
BseX3I CGGCCG 1 cut(s) 1141
BseXI GCAGC 3 cut(s) 674, 913, 1421
BseYI CCCAGC 1 cut(s) 1012
BsgI GTGCAG 2 cut(s) 848, 1428
Bsh1236I CGCG 1 cut(s) 596
Bsh1285I CGRYCG 1 cut(s) 1144
BshFI GGCC 4 cut(s) 192, 403, 437, 1143
BshNI GGYRCC 3 cut(s) 218, 837, 1421
BsiEI CGRYCG 1 cut(s) 1144
BsiHKAI GWGCWC 4 cut(s) 8, 949, 1240, 1320
BsiSI CCGG 2 cut(s) 531, 1945
BslFI GGGAC 2 cut(s) 1030, 1976
BslI CCNNNNNNNGG 3 cut(s) 847, 1047, 1508
BsmFI GGGAC 2 cut(s) 1030, 1976
BsmI GAATGC 4 cut(s) 625, 718, 1117, 1225
BsnI GGCC 4 cut(s) 192, 403, 437, 1143
Bsp1286I GDGCHC 6 cut(s) 8, 519, 949, 1240, 1320, 1426
Bsp143I GATC 3 cut(s) 324, 952, 1716
BspACI CCGC 1 cut(s) 596
BspANI GGCC 4 cut(s) 192, 403, 437, 1143
BspCNI CTCAG 1 cut(s) 1300
BspFNI CGCG 1 cut(s) 596
BspLI GGNNCC 6 cut(s) 220, 839, 1197, 1423, 1500, 1964
BspMAI CTGCAG 2 cut(s) 443, 474
BspMI ACCTGC 2 cut(s) 1366, 1541
BspT107I GGYRCC 3 cut(s) 218, 837, 1421
BsrDI GCAATG 3 cut(s) 630, 723, 1776
BssMI GATC 3 cut(s) 324, 952, 1716
BssNI GRCGYC 1 cut(s) 599
Bst2UI CCWGG 3 cut(s) 400, 1617, 1860
Bst4CI ACNGT 3 cut(s) 1817, 1907, 1967
Bst6I CTCTTC 1 cut(s) 1359
BstACI GRCGYC 1 cut(s) 599
BstAPI GCANNNNNTGC 1 cut(s) 1154
BstBAI YACGTR 1 cut(s) 487
BstC8I GCNNGC 6 cut(s) 165, 217, 439, 1131, 1438, 1827
BstDEI CTNAG 5 cut(s) 182, 503, 666, 1226, 1308
BstF5I GGATG 5 cut(s) 658, 1009, 1168, 1567, 1869
BstFNI CGCG 1 cut(s) 596
BstHHI GCGC 1 cut(s) 1974
BstKTI GATC 3 cut(s) 327, 955, 1719
BstMBI GATC 3 cut(s) 324, 952, 1716
BstMCI CGRYCG 1 cut(s) 1144
BstMWI GCNNNNNNNGC 4 cut(s) 932, 1135, 1154, 1229
BstNI CCWGG 3 cut(s) 400, 1617, 1860
BstSCI CCNGG 5 cut(s) 398, 530, 1615, 1858, 1944
BstSFI CTRYAG 2 cut(s) 439, 470
BstSLI GKGCMC 2 cut(s) 519, 1426
BstUI CGCG 1 cut(s) 596
BstV1I GCAGC 3 cut(s) 674, 913, 1421
BstZI CGGCCG 1 cut(s) 1141
Bsu36I CCTNAGG 1 cut(s) 182
BsuI GTATCC 2 cut(s) 573, 1437
BsuRI GGCC 4 cut(s) 192, 403, 437, 1143
BtrI CACGTC 1 cut(s) 49
BtsCI GGATG 5 cut(s) 658, 1009, 1168, 1567, 1869
BtsI GCAGTG 2 cut(s) 462, 1014
BtsIMutI CAGTG 4 cut(s) 353, 462, 1014, 1822
BveI ACCTGC 2 cut(s) 1366, 1541
Cac8I GCNNGC 6 cut(s) 165, 217, 439, 1131, 1438, 1827
CfoI GCGC 1 cut(s) 1974
Cfr13I GGNCC 1 cut(s) 1963
CseI GACGC 4 cut(s) 537, 588, 602, 1524
Csp6I GTAC 3 cut(s) 637, 838, 1844
CspCI CAANNNNNGTGG 4 cut(s) 944, 979, 981, 1016
CviQI GTAC 3 cut(s) 637, 838, 1844
DdeI CTNAG 5 cut(s) 182, 503, 666, 1226, 1308
DpnI GATC 3 cut(s) 326, 954, 1718
DpnII GATC 3 cut(s) 324, 952, 1716
DraIII CACNNNGTG 2 cut(s) 173, 490
DriI GACNNNNNGTC 1 cut(s) 598
EaeI YGGCCR 1 cut(s) 1141
EagI CGGCCG 1 cut(s) 1141
Eam1104I CTCTTC 1 cut(s) 1359
Eam1105I GACNNNNNGTC 1 cut(s) 598
EarI CTCTTC 1 cut(s) 1359
EclXI CGGCCG 1 cut(s) 1141
Eco147I AGGCCT 2 cut(s) 403, 437
Eco47I GGWCC 1 cut(s) 1963
Eco52I CGGCCG 1 cut(s) 1141
Eco57I CTGAAG 1 cut(s) 1782
Eco72I CACGTG 1 cut(s) 487
Eco81I CCTNAGG 1 cut(s) 182
EcoRI GAATTC 1 cut(s) 1655
EcoRII CCWGG 3 cut(s) 398, 1615, 1858
EcoT22I ATGCAT 1 cut(s) 1159
FaqI GGGAC 2 cut(s) 1030, 1976
FauNDI CATATG 1 cut(s) 684
FbaI TGATCA 2 cut(s) 324, 952
FblI GTMKAC 1 cut(s) 1698
Fnu4HI GCNGC 4 cut(s) 597, 663, 927, 1410
FokI GGATG 5 cut(s) 665, 1016, 1175, 1574, 1856
Fsp4HI GCNGC 4 cut(s) 597, 663, 927, 1410
FspBI CTAG 5 cut(s) 587, 735, 891, 897, 1404
GlaI GCGC 1 cut(s) 1973
GluI GCNGC 4 cut(s) 597, 663, 927, 1410
GsaI CCCAGC 1 cut(s) 1016
GsuI CTGGAG 2 cut(s) 382, 1751
HaeIII GGCC 4 cut(s) 192, 403, 437, 1143
HapII CCGG 2 cut(s) 531, 1945
HgaI GACGC 4 cut(s) 537, 588, 602, 1524
HhaI GCGC 1 cut(s) 1974
Hin1I GRCGYC 1 cut(s) 599
Hin6I GCGC 1 cut(s) 1972
HinP1I GCGC 1 cut(s) 1972
HindIII AAGCTT 1 cut(s) 1823
HinfI GANTC 5 cut(s) 74, 475, 535, 773, 1620
HpaII CCGG 2 cut(s) 531, 1945
HphI GGTGA 6 cut(s) 60, 406, 502, 733, 1478, 1740
Hpy166II GTNNAC 3 cut(s) 414, 1514, 1699
Hpy188I TCNGA 5 cut(s) 604, 1218, 1762, 1841, 1988
Hpy188III TCNNGA 2 cut(s) 124, 1174
Hpy8I GTNNAC 3 cut(s) 414, 1514, 1699
HpyCH4III ACNGT 3 cut(s) 1817, 1907, 1967
HpyCH4IV ACGT 2 cut(s) 48, 486
HpyF10VI GCNNNNNNNGC 4 cut(s) 932, 1135, 1154, 1229
HpyF3I CTNAG 5 cut(s) 182, 503, 666, 1226, 1308
HpySE526I ACGT 2 cut(s) 48, 486
Hsp92I GRCGYC 1 cut(s) 599
HspAI GCGC 1 cut(s) 1972
KpnI GGTACC 1 cut(s) 841
Ksp22I TGATCA 2 cut(s) 324, 952
Kzo9I GATC 3 cut(s) 324, 952, 1716
LmnI GCTCC 2 cut(s) 944, 1433
Lsp1109I GCAGC 3 cut(s) 674, 913, 1421
LweI GCATC 6 cut(s) 745, 861, 994, 1144, 1167, 1695
MaeI CTAG 5 cut(s) 587, 735, 891, 897, 1404
MaeII ACGT 2 cut(s) 48, 486
MaeIII GTNAC 1 cut(s) 1674
MalI GATC 3 cut(s) 326, 954, 1718
MboI GATC 3 cut(s) 324, 952, 1716
MboII GAAGA 9 cut(s) 521, 895, 997, 1162, 1198, 1376, 1726, 1894, 2007
MfeI CAATTG 2 cut(s) 1395, 1830
MhlI GDGCHC 6 cut(s) 8, 519, 949, 1240, 1320, 1426
MluCI AATT 9 cut(s) 993, 1269, 1384, 1395, 1493, 1583, 1655, 1830, 1934
MmeI TCCRAC 1 cut(s) 596
Mph1103I ATGCAT 1 cut(s) 1159
MroXI GAANNNNTTC 1 cut(s) 1999
MseI TTAA 1 cut(s) 981
MslI CAYNNNNRTG 1 cut(s) 1452
MspA1I CMGCKG 1 cut(s) 1412
MspI CCGG 2 cut(s) 531, 1945
MspR9I CCNGG 5 cut(s) 400, 532, 1617, 1860, 1946
MunI CAATTG 2 cut(s) 1395, 1830
Mva1269I GAATGC 4 cut(s) 625, 718, 1117, 1225
MvaI CCWGG 3 cut(s) 400, 1617, 1860
MvnI CGCG 1 cut(s) 596
MwoI GCNNNNNNNGC 4 cut(s) 932, 1135, 1154, 1229
NciI CCSGG 2 cut(s) 532, 1946
NdeI CATATG 1 cut(s) 684
NdeII GATC 3 cut(s) 324, 952, 1716
NlaIV GGNNCC 6 cut(s) 220, 839, 1197, 1423, 1500, 1964
NmeAIII GCCGAG 1 cut(s) 1169
NmuCI GTSAC 1 cut(s) 1674
NsiI ATGCAT 1 cut(s) 1159
PceI AGGCCT 2 cut(s) 403, 437
PctI GAATGC 4 cut(s) 625, 718, 1117, 1225
PdmI GAANNNNTTC 1 cut(s) 1999
PfeI GAWTC 5 cut(s) 74, 475, 535, 773, 1620
PflMI CCANNNNNTGG 1 cut(s) 1508
PfoI TCCNGGA 1 cut(s) 1615
PkrI GCNGC 4 cut(s) 598, 664, 928, 1411
PmaCI CACGTG 1 cut(s) 487
PmlI CACGTG 1 cut(s) 487
Ppu21I YACGTR 1 cut(s) 487
PsiI TTATAA 2 cut(s) 378, 1382
Psp6I CCWGG 3 cut(s) 398, 1615, 1858
PspCI CACGTG 1 cut(s) 487
PspFI CCCAGC 1 cut(s) 1012
PspGI CCWGG 3 cut(s) 398, 1615, 1858
PspN4I GGNNCC 6 cut(s) 220, 839, 1197, 1423, 1500, 1964
PspPI GGNCC 1 cut(s) 1963
PstI CTGCAG 2 cut(s) 443, 474
PvuII CAGCTG 1 cut(s) 1412
RsaI GTAC 3 cut(s) 638, 839, 1845
RsaNI GTAC 3 cut(s) 637, 838, 1844
RseI CAYNNNNRTG 1 cut(s) 1452
SaqAI TTAA 1 cut(s) 981
SatI GCNGC 4 cut(s) 597, 663, 927, 1410
Sau3AI GATC 3 cut(s) 324, 952, 1716
Sau96I GGNCC 1 cut(s) 1963
ScaI AGTACT 1 cut(s) 1845
ScrFI CCNGG 5 cut(s) 400, 532, 1617, 1860, 1946
SduI GDGCHC 6 cut(s) 8, 519, 949, 1240, 1320, 1426
SfaNI GCATC 6 cut(s) 745, 861, 994, 1144, 1167, 1695
SfcI CTRYAG 2 cut(s) 439, 470
SinI GGWCC 1 cut(s) 1963
SmiMI CAYNNNNRTG 1 cut(s) 1452
SmlI CTYRAG 3 cut(s) 158, 1709, 1888
SmoI CTYRAG 3 cut(s) 158, 1709, 1888
Sse9I AATT 9 cut(s) 993, 1269, 1384, 1395, 1493, 1583, 1655, 1830, 1934
SseBI AGGCCT 2 cut(s) 403, 437
SsiI CCGC 1 cut(s) 596
SspMI CTAG 5 cut(s) 587, 735, 891, 897, 1404
StuI AGGCCT 2 cut(s) 403, 437
StyD4I CCNGG 5 cut(s) 398, 530, 1615, 1858, 1944
TaaI ACNGT 3 cut(s) 1817, 1907, 1967
TaiI ACGT 2 cut(s) 51, 489
TaqI TCGA 3 cut(s) 914, 1103, 1773
TaqII GACCGA 1 cut(s) 797
TasI AATT 9 cut(s) 993, 1269, 1384, 1395, 1493, 1583, 1655, 1830, 1934
TatI WGTACW 1 cut(s) 1843
TauI GCSGC 1 cut(s) 599
TfiI GAWTC 5 cut(s) 74, 475, 535, 773, 1620
Tru1I TTAA 1 cut(s) 981
Tru9I TTAA 1 cut(s) 981
TscAI CASTG 4 cut(s) 360, 462, 1014, 1822
TseFI GTSAC 1 cut(s) 1674
TseI GCWGC 3 cut(s) 662, 926, 1409
Tsp45I GTSAC 1 cut(s) 1674
TspDTI ATGAA 9 cut(s) 357, 407, 467, 959, 1272, 1298, 1604, 1668, 1703
TspGWI ACGGA 2 cut(s) 1105, 1862
TspRI CASTG 4 cut(s) 360, 462, 1014, 1822
Van91I CCANNNNNTGG 1 cut(s) 1508
VpaK11BI GGWCC 1 cut(s) 1963
XapI RAATTY 2 cut(s) 1384, 1655
XmiI GTMKAC 1 cut(s) 1698
XmnI GAANNNNTTC 1 cut(s) 1999
XspI CTAG 5 cut(s) 587, 735, 891, 897, 1404
ZrmI AGTACT 1 cut(s) 1845
Zsp2I ATGCAT 1 cut(s) 1159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.