Rroxscaffold_6G00422030

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0013694
Physical Location & Seq
Reverse (-)
43054636 .. 43058144
3509 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00422030.1

Sequence Viewer

Length: 2019 bp
ATGAACACAACCACCACCACCACCACAAACCTTCCTCATCACATCAAACCAAAGGAAGCCTCACCAGAAACCAAACCTACCTTCAAGCTCTCCCAGAAAACAATCCTAGACATCTTGAACACAAAATGCACCACTTCTCTACAAAACCTCAAGCAAGCCCATGGTGTTGTCCTGAGGTCAGGCCACTTTCAAGACCATTATGTAGCAGGCACCATACTAAAATGCTATGCAAGTCCTCACTTCAACGACTTTGGGTTTGCTTTGAAGGTGTTTGATAATGTGTGGAGGCCAAATGTGTTTGTATGGAACATTATGATCAAAGGGTGTGTGGAGAACTATGAGGCACTGGAAGCTATTTCATTTTATTGTAAGATGGTGGATATGAATTCCAGGCCTAACAAGTTCACCTATCCTATGTTGTTCAAGGCCTGCAGATTAGTTCAAGCAGTGGAGGAAGGTCTGCAAATTCATGCACATGTGGTGAAGCAAAAGCTTAGTGAAGATGGGCACATAAGAAGTGCTGGGATTCAAATGTATGCGTCTTTTGGGCTTGTGGAGGAGGCAAGGAGGATATTGCTAGACGACGCAGCATCTTCTGATGTTGTTTGTTGGAATGCAATGATTGATGGGTACATGAAATGTGGGGATGTAGAAGCAGCTAAGGAGTTGTTTGATAAGCACATGCCAATTAAGAATGTTGGGTCTTGGAATGCAATGGTGAGTGGTTTTGCCAAGTGTGGGAGGTTGAAAGATGCAAGGGCGGTATTTGATGAAATGACTGAGAGAGATGAGATTTCTTGGAGTGCTATGATTGATGGTTATGTGCAAGGAGGGTATCACAAGGAGGCATTGGACGTTTTCAATGAGATGCAAAAGGAGAAGATTGTTAGTCCAAGGAAATTCGTATTTTCGAGTGTGTTAGCTGCTTGTGCCAATGTGGGAGCACTTGATCAAGGAAAGTGGATTCATGGTTATATTAAGAAGAACTCAATTCAGGTGGATGCACTACTGGGGACTGCTTTGGTTGATATGTATGCCAAATGTGGGAGGCTTGACATGGCATGGGAAGTGTTTGAAAATGTGAAACGGAAAGAGGTTTCGACATGGAATGCCATGATTGGTGGGCTTGCTATGCACGGCCGAGCAGATGATGCATTGGATGTGTTCTTCAAGATGCAAGGGAATAATTTGGAACCAAATGGGATTACTTTTCTGAATGCTCTAAGTGCTTGTGCTCATGGGGGTTTTGTTGATGAAGGTCTTACAATATTTAGTTCTATGAAGGAAATGTATGGTATGGAGGCTGAGGTAGAGCACTATGGGTGTGTGGTTGATATGTTTGGAAGGGCAGGGCTATTGGAAGAGGCAGAGCAGGTAATAAATTCAATGCCAATTGAACCTAGTGCAGCTGTTTATGGTGCCCTGTTGGGCGCTTGCAGGATACATGGAAATGTTGAAATGGGTGAGAGAGTAGGGAGGATTTTGCTTGAATTGGAACCGCAGAATAGTGGACGTTACACGTTGTTATCTAACATCTATGCAAAGGCAGGTATGTGGGATGATGCTGCAGAGGTAAGAAAATTGATGAAGGAAAGGGGAGTAAAGACTATTCCTGGAATTAGCACGGTTGATATTGGTGGCAAAGTGCATGAATTCAAAATGGGAGATGGGTCACACCCACAAATGAAGGAGGTCTACTTGATGCTTGAAAAGATTATAGAAAAGCTGGAGACGGAGGGTTATTCACCGAATACATCTCACGTTTTGTTTGACATTGCAGAGGAGGAGAAGGAAACAGCACTGCGGTACCACAGTGAGAAGCTTGCAATTGCTTTCGGAGTACTCAACACAAAACCTGGAACAACCATCCGTGTTGTGAAGAACTTGAGGATTTGTGAGGACTGTCATTCTGCCATAAAGCTCTTTTCACAAGTATACAACCGGGATATAATTGTGAGGGACCGTATGCGCTATCATCATTTTAGAAATGGAAAGTGTTCGTGCAAGGATTTTTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

672

Amino Acids

75.43

Weight (kDa)

6.46

Isoelectric Point (pI)

35.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 97 - 144 2.4e-10 PPR repeat family
PPR_2 PF13041 200 - 225 8.8e-07 PPR repeat family
PPR PF01535 202 - 226 1.8e-06 PPR repeat
PPR_1 PF12854 232 - 260 3.2e-06 PPR repeat
PPR PF01535 235 - 262 3.7e-07 PPR repeat
PPR_2 PF13041 263 - 312 2.3e-07 PPR repeat family
PPR PF01535 265 - 294 2.4e-08 PPR repeat
PPR_2 PF13041 366 - 412 1.4e-08 PPR repeat family
PPR PF01535 367 - 396 5.2e-07 PPR repeat
E_motif PF20431 482 - 544 5.9e-22 E motif
DYW_deaminase PF14432 580 - 672 2.5e-41 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1363, 1538
Acc65I GGTACC 1 cut(s) 1806
AccB1I GGYRCC 3 cut(s) 209, 1418, 1806
AccI GTMKAC 2 cut(s) 1695, 1935
AciI CCGC 3 cut(s) 761, 1499, 1804
AcoI YGGCCR 1 cut(s) 1138
AcsI RAATTY 5 cut(s) 385, 465, 899, 1381, 1652
AfaI GTAC 3 cut(s) 632, 1808, 1842
AfiI CCNNNNNNNGG 2 cut(s) 738, 1044
AflIII ACRYGT 2 cut(s) 475, 1518
AjnI CCWGG 3 cut(s) 389, 1612, 1855
AjuI GAANNNNNNNTTGG 2 cut(s) 65, 97
AluBI AGCT 9 cut(s) 88, 353, 493, 659, 923, 1409, 1726, 1822, 1921
AluI AGCT 9 cut(s) 88, 353, 493, 659, 923, 1409, 1726, 1822, 1921
Alw21I GWGCWC 3 cut(s) 946, 1237, 1317
Alw26I GTCTC 1 cut(s) 1724
AoxI GGCC 5 cut(s) 181, 287, 392, 426, 1138
ApeKI GCWGC 5 cut(s) 587, 656, 923, 1406, 1565
ApoI RAATTY 5 cut(s) 385, 465, 899, 1381, 1652
ArsI GACNNNNNNTTYG 2 cut(s) 239, 271
Asp700I GAANNNNTTC 1 cut(s) 1996
Asp718I GGTACC 1 cut(s) 1806
AspLEI GCGC 2 cut(s) 1433, 1971
AspS9I GGNCC 1 cut(s) 1960
AsuC2I CCSGG 1 cut(s) 1943
AsuHPI GGTGA 6 cut(s) 54, 397, 493, 730, 1475, 1737
AvaII GGWCC 1 cut(s) 1960
AxyI CCTNAGG 1 cut(s) 173
BaeGI GKGCMC 2 cut(s) 510, 1423
BaeI ACNNNNGTAYC 4 cut(s) 1790, 1798, 1823, 1831
BanI GGYRCC 3 cut(s) 209, 1418, 1806
BarI GAAGNNNNNNTAC 2 cut(s) 1679, 1711
Bbv12I GWGCWC 3 cut(s) 946, 1237, 1317
BbvCI CCTCAGC 1 cut(s) 1305
BbvI GCAGC 5 cut(s) 599, 668, 910, 1418, 1552
BccI CCATC 6 cut(s) 367, 497, 620, 809, 1661, 1874
BceAI ACGGC 1 cut(s) 1153
BciT130I CCWGG 3 cut(s) 391, 1614, 1857
BciVI GTATCC 1 cut(s) 1434
BclI TGATCA 2 cut(s) 315, 949
BcnI CCSGG 1 cut(s) 1943
BcoDI GTCTC 1 cut(s) 1724
BfaI CTAG 3 cut(s) 107, 578, 1401
BfmI CTRYAG 2 cut(s) 430, 1566
BfoI RGCGCY 1 cut(s) 1434
BfuAI ACCTGC 2 cut(s) 1363, 1538
BfuI GTATCC 1 cut(s) 1434
BisI GCNGC 5 cut(s) 588, 657, 924, 1407, 1566
BlsI GCNGC 5 cut(s) 589, 658, 925, 1408, 1567
BmcAI AGTACT 1 cut(s) 1842
Bme1390I CCNGG 4 cut(s) 391, 1614, 1857, 1943
Bme18I GGWCC 1 cut(s) 1960
BmgT120I GGNCC 1 cut(s) 1960
BmiI GGNNCC 6 cut(s) 211, 1194, 1420, 1497, 1808, 1961
BmrFI CCNGG 4 cut(s) 391, 1614, 1857, 1943
BmrI ACTGGG 1 cut(s) 1019
BmsI GCATC 8 cut(s) 599, 742, 858, 991, 1141, 1164, 1552, 1692
BmuI ACTGGG 1 cut(s) 1019
BpmI CTGGAG 1 cut(s) 1748
Bpu10I CCTNAGC 2 cut(s) 660, 1305
BpuEI CTTGAG 2 cut(s) 134, 1906
BpuMI CCSGG 1 cut(s) 1943
BsaJI CCNNGG 2 cut(s) 160, 893
Bsc4I CCNNNNNNNGG 2 cut(s) 738, 1044
Bse1I ACTGG 2 cut(s) 351, 1014
Bse21I CCTNAGG 1 cut(s) 173
Bse3DI GCAATG 3 cut(s) 624, 720, 1773
BseBI CCWGG 3 cut(s) 391, 1614, 1857
BseDI CCNNGG 2 cut(s) 160, 893
BseGI GGATG 5 cut(s) 652, 1006, 1165, 1564, 1866
BseLI CCNNNNNNNGG 2 cut(s) 738, 1044
BseMI GCAATG 3 cut(s) 624, 720, 1773
BseMII CTCAG 3 cut(s) 164, 771, 1296
BseNI ACTGG 2 cut(s) 351, 1014
BseRI GAGGAG 3 cut(s) 572, 1796, 1799
BseSI GKGCMC 2 cut(s) 510, 1423
BseX3I CGGCCG 1 cut(s) 1138
BseXI GCAGC 5 cut(s) 599, 668, 910, 1418, 1552
BseYI CCCAGC 1 cut(s) 521
BsgI GTGCAG 1 cut(s) 1425
Bsh1285I CGRYCG 1 cut(s) 1141
BshFI GGCC 5 cut(s) 183, 289, 394, 428, 1140
BshNI GGYRCC 3 cut(s) 209, 1418, 1806
BsiEI CGRYCG 1 cut(s) 1141
BsiHKAI GWGCWC 3 cut(s) 946, 1237, 1317
BsiSI CCGG 1 cut(s) 1942
BslFI GGGAC 2 cut(s) 1027, 1973
BslI CCNNNNNNNGG 2 cut(s) 738, 1044
BsmAI GTCTC 1 cut(s) 1724
BsmBI CGTCTC 1 cut(s) 1724
BsmFI GGGAC 2 cut(s) 1027, 1973
BsmI GAATGC 4 cut(s) 619, 715, 1114, 1222
BsnI GGCC 5 cut(s) 183, 289, 394, 428, 1140
Bsp1286I GDGCHC 5 cut(s) 510, 946, 1237, 1317, 1423
Bsp143I GATC 2 cut(s) 315, 949
Bsp19I CCATGG 1 cut(s) 160
BspACI CCGC 3 cut(s) 761, 1499, 1804
BspANI GGCC 5 cut(s) 183, 289, 394, 428, 1140
BspCNI CTCAG 3 cut(s) 165, 772, 1297
BspLI GGNNCC 6 cut(s) 211, 1194, 1420, 1497, 1808, 1961
BspMAI CTGCAG 2 cut(s) 434, 1570
BspMI ACCTGC 2 cut(s) 1363, 1538
BspT107I GGYRCC 3 cut(s) 209, 1418, 1806
BsrDI GCAATG 3 cut(s) 624, 720, 1773
BsrI ACTGG 2 cut(s) 351, 1014
BssECI CCNNGG 2 cut(s) 160, 893
BssMI GATC 2 cut(s) 315, 949
BssNAI GTATAC 1 cut(s) 1936
BssT1I CCWWGG 2 cut(s) 160, 893
Bst1107I GTATAC 1 cut(s) 1936
Bst2UI CCWGG 3 cut(s) 391, 1614, 1857
Bst4CI ACNGT 4 cut(s) 1627, 1814, 1904, 1964
Bst6I CTCTTC 1 cut(s) 1356
BstAPI GCANNNNNTGC 1 cut(s) 1151
BstC8I GCNNGC 6 cut(s) 156, 208, 430, 1128, 1435, 1824
BstDEI CTNAG 6 cut(s) 173, 494, 660, 780, 1223, 1305
BstDSI CCRYGG 1 cut(s) 160
BstF5I GGATG 5 cut(s) 652, 1006, 1165, 1564, 1866
BstH2I RGCGCY 1 cut(s) 1434
BstHHI GCGC 2 cut(s) 1433, 1971
BstKTI GATC 2 cut(s) 318, 952
BstMAI GTCTC 1 cut(s) 1724
BstMBI GATC 2 cut(s) 315, 949
BstMCI CGRYCG 1 cut(s) 1141
BstMWI GCNNNNNNNGC 5 cut(s) 350, 929, 1132, 1151, 1226
BstNI CCWGG 3 cut(s) 391, 1614, 1857
BstNSI RCATGY 2 cut(s) 479, 685
BstSCI CCNGG 4 cut(s) 389, 1612, 1855, 1941
BstSFI CTRYAG 2 cut(s) 430, 1566
BstSLI GKGCMC 2 cut(s) 510, 1423
BstV1I GCAGC 5 cut(s) 599, 668, 910, 1418, 1552
BstZ17I GTATAC 1 cut(s) 1936
BstZI CGGCCG 1 cut(s) 1138
Bsu36I CCTNAGG 1 cut(s) 173
BsuI GTATCC 1 cut(s) 1434
BsuRI GGCC 5 cut(s) 183, 289, 394, 428, 1140
BtgI CCRYGG 1 cut(s) 160
BtsCI GGATG 5 cut(s) 652, 1006, 1165, 1564, 1866
BtsI GCAGTG 2 cut(s) 453, 1799
BtsIMutI CAGTG 4 cut(s) 344, 453, 1799, 1819
BveI ACCTGC 2 cut(s) 1363, 1538
Cac8I GCNNGC 6 cut(s) 156, 208, 430, 1128, 1435, 1824
CfoI GCGC 2 cut(s) 1433, 1971
Cfr13I GGNCC 1 cut(s) 1960
CseI GACGC 2 cut(s) 528, 593
Csp6I GTAC 3 cut(s) 631, 1807, 1841
CspCI CAANNNNNGTGG 4 cut(s) 941, 976, 978, 1013
CviQI GTAC 3 cut(s) 631, 1807, 1841
DdeI CTNAG 6 cut(s) 173, 494, 660, 780, 1223, 1305
DpnI GATC 2 cut(s) 317, 951
DpnII GATC 2 cut(s) 315, 949
EaeI YGGCCR 1 cut(s) 1138
EagI CGGCCG 1 cut(s) 1138
Eam1104I CTCTTC 1 cut(s) 1356
EarI CTCTTC 1 cut(s) 1356
EclXI CGGCCG 1 cut(s) 1138
Eco130I CCWWGG 2 cut(s) 160, 893
Eco147I AGGCCT 2 cut(s) 394, 428
Eco47I GGWCC 1 cut(s) 1960
Eco52I CGGCCG 1 cut(s) 1138
Eco81I CCTNAGG 1 cut(s) 173
EcoRI GAATTC 2 cut(s) 385, 1652
EcoRII CCWGG 3 cut(s) 389, 1612, 1855
EcoT14I CCWWGG 2 cut(s) 160, 893
EcoT22I ATGCAT 1 cut(s) 1156
ErhI CCWWGG 2 cut(s) 160, 893
Esp3I CGTCTC 1 cut(s) 1724
FaqI GGGAC 2 cut(s) 1027, 1973
FbaI TGATCA 2 cut(s) 315, 949
FblI GTMKAC 2 cut(s) 1695, 1935
Fnu4HI GCNGC 5 cut(s) 588, 657, 924, 1407, 1566
FokI GGATG 5 cut(s) 659, 1013, 1172, 1571, 1853
Fsp4HI GCNGC 5 cut(s) 588, 657, 924, 1407, 1566
FspBI CTAG 3 cut(s) 107, 578, 1401
GlaI GCGC 2 cut(s) 1432, 1970
GluI GCNGC 5 cut(s) 588, 657, 924, 1407, 1566
GsaI CCCAGC 1 cut(s) 525
GsuI CTGGAG 1 cut(s) 1748
HaeII RGCGCY 1 cut(s) 1434
HaeIII GGCC 5 cut(s) 183, 289, 394, 428, 1140
HapII CCGG 1 cut(s) 1942
HgaI GACGC 2 cut(s) 528, 593
HhaI GCGC 2 cut(s) 1433, 1971
Hin6I GCGC 2 cut(s) 1431, 1969
HinP1I GCGC 2 cut(s) 1431, 1969
HindIII AAGCTT 2 cut(s) 491, 1820
HinfI GANTC 2 cut(s) 526, 964
HpaII CCGG 1 cut(s) 1942
HphI GGTGA 6 cut(s) 54, 397, 493, 730, 1475, 1737
Hpy166II GTNNAC 4 cut(s) 405, 1511, 1696, 1936
Hpy188I TCNGA 3 cut(s) 598, 1215, 1838
Hpy188III TCNNGA 4 cut(s) 115, 172, 191, 1171
Hpy8I GTNNAC 4 cut(s) 405, 1511, 1696, 1936
Hpy99I CGWCG 1 cut(s) 587
HpyCH4III ACNGT 4 cut(s) 1627, 1814, 1904, 1964
HpyCH4IV ACGT 4 cut(s) 855, 1513, 1520, 1761
HpyF10VI GCNNNNNNNGC 5 cut(s) 350, 929, 1132, 1151, 1226
HpyF3I CTNAG 6 cut(s) 173, 494, 660, 780, 1223, 1305
HpySE526I ACGT 4 cut(s) 855, 1513, 1520, 1761
HspAI GCGC 2 cut(s) 1431, 1969
KpnI GGTACC 1 cut(s) 1810
Ksp22I TGATCA 2 cut(s) 315, 949
Kzo9I GATC 2 cut(s) 315, 949
LmnI GCTCC 1 cut(s) 941
Lsp1109I GCAGC 5 cut(s) 599, 668, 910, 1418, 1552
LweI GCATC 8 cut(s) 599, 742, 858, 991, 1141, 1164, 1552, 1692
MaeI CTAG 3 cut(s) 107, 578, 1401
MaeII ACGT 4 cut(s) 855, 1513, 1520, 1761
MaeIII GTNAC 2 cut(s) 1514, 1671
MalI GATC 2 cut(s) 317, 951
MboI GATC 2 cut(s) 315, 949
MboII GAAGA 7 cut(s) 512, 585, 892, 994, 1159, 1373, 1891
MfeI CAATTG 2 cut(s) 1392, 1827
MhlI GDGCHC 5 cut(s) 510, 946, 1237, 1317, 1423
MmeI TCCRAC 1 cut(s) 590
Mph1103I ATGCAT 1 cut(s) 1156
MroXI GAANNNNTTC 1 cut(s) 1996
MseI TTAA 2 cut(s) 690, 978
MslI CAYNNNNRTG 2 cut(s) 474, 1449
MspA1I CMGCKG 1 cut(s) 1409
MspI CCGG 1 cut(s) 1942
MspR9I CCNGG 4 cut(s) 391, 1614, 1857, 1943
MunI CAATTG 2 cut(s) 1392, 1827
Mva1269I GAATGC 4 cut(s) 619, 715, 1114, 1222
MvaI CCWGG 3 cut(s) 391, 1614, 1857
MwoI GCNNNNNNNGC 5 cut(s) 350, 929, 1132, 1151, 1226
NciI CCSGG 1 cut(s) 1943
NcoI CCATGG 1 cut(s) 160
NdeII GATC 2 cut(s) 315, 949
NlaIV GGNNCC 6 cut(s) 211, 1194, 1420, 1497, 1808, 1961
NmeAIII GCCGAG 1 cut(s) 1166
NmuCI GTSAC 1 cut(s) 1671
NsiI ATGCAT 1 cut(s) 1156
NspI RCATGY 2 cut(s) 479, 685
PceI AGGCCT 2 cut(s) 394, 428
PciI ACATGT 1 cut(s) 475
PctI GAATGC 4 cut(s) 619, 715, 1114, 1222
PdmI GAANNNNTTC 1 cut(s) 1996
PfeI GAWTC 2 cut(s) 526, 964
PfoI TCCNGGA 1 cut(s) 1612
PkrI GCNGC 5 cut(s) 589, 658, 925, 1408, 1567
PscI ACATGT 1 cut(s) 475
Psp6I CCWGG 3 cut(s) 389, 1612, 1855
PspFI CCCAGC 1 cut(s) 521
PspGI CCWGG 3 cut(s) 389, 1612, 1855
PspN4I GGNNCC 6 cut(s) 211, 1194, 1420, 1497, 1808, 1961
PspPI GGNCC 1 cut(s) 1960
PstI CTGCAG 2 cut(s) 434, 1570
PvuII CAGCTG 1 cut(s) 1409
RsaI GTAC 3 cut(s) 632, 1808, 1842
RsaNI GTAC 3 cut(s) 631, 1807, 1841
RseI CAYNNNNRTG 2 cut(s) 474, 1449
SaqAI TTAA 2 cut(s) 690, 978
SatI GCNGC 5 cut(s) 588, 657, 924, 1407, 1566
Sau3AI GATC 2 cut(s) 315, 949
Sau96I GGNCC 1 cut(s) 1960
ScaI AGTACT 1 cut(s) 1842
ScrFI CCNGG 4 cut(s) 391, 1614, 1857, 1943
SduI GDGCHC 5 cut(s) 510, 946, 1237, 1317, 1423
SfaNI GCATC 8 cut(s) 599, 742, 858, 991, 1141, 1164, 1552, 1692
SfcI CTRYAG 2 cut(s) 430, 1566
SinI GGWCC 1 cut(s) 1960
SmiMI CAYNNNNRTG 2 cut(s) 474, 1449
SmlI CTYRAG 2 cut(s) 149, 1885
SmoI CTYRAG 2 cut(s) 149, 1885
SseBI AGGCCT 2 cut(s) 394, 428
SsiI CCGC 3 cut(s) 761, 1499, 1804
SspI AATATT 1 cut(s) 1269
SspMI CTAG 3 cut(s) 107, 578, 1401
StuI AGGCCT 2 cut(s) 394, 428
StyD4I CCNGG 4 cut(s) 389, 1612, 1855, 1941
StyI CCWWGG 2 cut(s) 160, 893
TaaI ACNGT 4 cut(s) 1627, 1814, 1904, 1964
TaiI ACGT 4 cut(s) 858, 1516, 1523, 1764
TaqI TCGA 2 cut(s) 911, 1100
TatI WGTACW 1 cut(s) 1840
TfiI GAWTC 2 cut(s) 526, 964
Tru1I TTAA 2 cut(s) 690, 978
Tru9I TTAA 2 cut(s) 690, 978
TscAI CASTG 4 cut(s) 351, 453, 1806, 1819
TseFI GTSAC 1 cut(s) 1671
TseI GCWGC 5 cut(s) 587, 656, 923, 1406, 1565
Tsp45I GTSAC 1 cut(s) 1671
TspGWI ACGGA 3 cut(s) 1102, 1748, 1859
TspRI CASTG 4 cut(s) 351, 453, 1806, 1819
VpaK11BI GGWCC 1 cut(s) 1960
XapI RAATTY 5 cut(s) 385, 465, 899, 1381, 1652
XceI RCATGY 2 cut(s) 479, 685
XmiI GTMKAC 2 cut(s) 1695, 1935
XmnI GAANNNNTTC 1 cut(s) 1996
XspI CTAG 3 cut(s) 107, 578, 1401
ZrmI AGTACT 1 cut(s) 1842
Zsp2I ATGCAT 1 cut(s) 1156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.