MD12G1204800.v1.1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
OG0013694
Physical Location & Seq
Reverse (-)
28557971 .. 28559977
2007 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1204800.v1.1.491

Sequence Viewer

Length: 2007 bp
ATGAGCACATCCAGCACCACAAATCTTCCTCACAACATCAAACCAAATGAATCCACAGAAGATATCAAATCTCCCACCCCCAAGCTCTCCCAGAAAACAATCTTACACATCGTAAACACGAAATGCGCAACTTCGCTGCAACGTCTCAAGCAAGCTCATGGTGTTGCCCTGAGGTCAGGCCACTTCCAAGACCATTACGTGGCGGGGGCTGTCGTGAAATGCTACGCAAGCAACAACTTCGGGCTTGCGTTGAAGGTCTTCGATTGCGTGTGGAGGCCGAATGTGTTTGTGTGGAATATTGTGATCAAAGGGTGCCTAGAGCACAATGAGGCATTCAGTTGTGTGTCATATTATTGTAAGATGGTGGATATGAATGCCAGGCCTAATAAGTTCACGTATTCCATGTTGTTCAAAGCCTGCACGTTGGCTCAAGCGGTGGAGGAAGGCCTGCAAATCCACGCGCATGTTGTTAAAAATCAGTTTGGTGAAGATGGGCACATAAGGAGCGCTGGGATTCAAATGTACGCGTCTTTTGGGCTCGTGGAGGAGGCAAGGATAATGCTCGATGAGGGTGGGGAAGCGAACGATGTTGTTTGTTGGAACGCGATGATAGATGGTTACATGAAATGTGGAGATGTGGAGGCAGCTAAAGAACTGTTTTATAAGCATATGCCGAGTAAAAACATCGGTTCTTGGAATGCAATGGTGAGTGGTCTTGCTAGGTGTGGCAGGATTGAAGAGGCGAGGGAGTTGTTTGACGGCATGAGCGAAAGGGACGAGATATCTTGGAGTGCTATGATTGATGGCTACATACAAGGAGGGTTTCACAAGGAGGCATTGGAAATATTCAATGATATGCAAAAGGAGAACTTAATTAGTCCGAAAAAATTCGTGTTGTCAAGTGTGCTATCTGCTTGTGCTAATGTGGGAGCACTTGATCAAGGAAAATGGATTCATGCTCACATCAAGAAGAACAATATTCAACTGGATGCGGTTCTTGGGACTGCTTTGCTTGACATGTATGCAAAATGCGGGCGGATTGACATGGCGTGGGAGGTGTTTGAAAATGTCAAACAGAAAGAGATTTCGACATGGAATGCCATGATTGGAGCGCTTGCTATGCACGGGCGAGCAGAGGATGCAATTGAGCTTTTCGCCAAGATGCAGATGCGTAAGTTGGAACCAAATGGAATTACATTTTTGAATGCCTTAAATGCTTGTGCTCATTCGGGTTTTGTCGAGAAAGGTCTTGAAATCTTCAGTTCTATGAAGAGATTTTATGGCATTGAGCCTGAGGTGGAGCACTACGGGTGTGTGGTTGATATGTTTGGAAGGGCAGGGAAATTGGAAGAGGCAGAGCAGCTCATAAACTTGATGCCAATCGAACCCAATGCAGCAGTTTGGGGGGCGTTATTAGGCGCTTGCAGGATACATGGAAATGTCGAAATGGGAGAGAGAGTAGGAAAGATTTTGCTCGAATTGGAGCCTCAAAACAGCGGTCGCTACACGTTGTTATCGAACATTTACGCGAAGGCAGGCAGGTTTGATGATGCTGCAAAAGTAAGAGCTTTGATGAAGGAGAGAGGGGTTAAGACGAGTCGAGGGATTAGCATGGTCGACATTGGTGGCATTGTTCATGAATTCAAAGTGGGAGACGGATCACACCCGAGTACTAAGGAGGTCTATTCGACGCTGGAAAGGATCATAGAGAAGCTGCAGACGGAGGGTTATTCGCCGAGTAGCTCACAAGTCTTGTTTGACATTGCAGAGGAGGAGAAGGAAACTGCACTGCAGTACCACAGTGAAAAGCTTGCCATTGCTTTCGGAGTCCTCAACACAAAACCCGGAACAGCCATTCGCGTCACGAAGAACTTGAGGATCTGTGAGGATTGCCATTCTGCAGTAAAGATCTTCTCAAAAGTATACGAAAGGGATGTGATCGTTAGGGACCGGATGCGGTATCATCATTTTAGAAATGGAAGGTGTTCATGTAAGGATTTTTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

669

Amino Acids

74.69

Weight (kDa)

6.77

Isoelectric Point (pI)

45.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 93 - 140 7.5e-10 PPR repeat family
PPR_2 PF13041 196 - 227 1.6e-06 PPR repeat family
PPR PF01535 198 - 221 5.2e-06 PPR repeat
PPR PF01535 231 - 258 4e-07 PPR repeat
PPR_2 PF13041 259 - 307 9.3e-06 PPR repeat family
PPR PF01535 261 - 290 1.9e-07 PPR repeat
PPR_2 PF13041 362 - 409 5.7e-10 PPR repeat family
PPR PF01535 363 - 391 9.5e-07 PPR repeat
E_motif PF20431 478 - 539 8.4e-19 E motif
DYW_deaminase PF14432 576 - 668 2.1e-39 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 663
Acc16I TGCGCA 1 cut(s) 127
Acc36I ACCTGC 1 cut(s) 1530
AccB1I GGYRCC 1 cut(s) 312
AccB7I CCANNNNNTGG 1 cut(s) 199
AccI GTMKAC 2 cut(s) 1617, 1923
AccII CGCG 5 cut(s) 461, 527, 605, 1529, 1860
AciI CCGC 7 cut(s) 203, 434, 992, 1032, 1036, 1497, 1957
AclWI GGATC 3 cut(s) 1666, 1709, 1886
AcsI RAATTY 2 cut(s) 887, 1640
AcuI CTGAAG 1 cut(s) 1243
AfaI GTAC 3 cut(s) 524, 1672, 1796
AfeI AGCGCT 2 cut(s) 508, 1113
AfiI CCNNNNNNNGG 1 cut(s) 199
AflIII ACRYGT 3 cut(s) 525, 1017, 1506
AjnI CCWGG 1 cut(s) 377
AluBI AGCT 9 cut(s) 85, 155, 647, 1150, 1363, 1568, 1714, 1743, 1810
AluI AGCT 9 cut(s) 85, 155, 647, 1150, 1363, 1568, 1714, 1743, 1810
Alw21I GWGCWC 5 cut(s) 8, 324, 934, 1225, 1305
Alw26I GTCTC 2 cut(s) 149, 1647
AlwI GGATC 3 cut(s) 1666, 1709, 1886
Ama87I CYCGRG 1 cut(s) 1666
Aor51HI AGCGCT 2 cut(s) 508, 1113
AoxI GGCC 4 cut(s) 178, 275, 380, 445
ApeKI GCWGC 6 cut(s) 136, 644, 1360, 1394, 1553, 1714
ApoI RAATTY 2 cut(s) 887, 1640
ArsI GACNNNNNNTTYG 2 cut(s) 1483, 1515
Asp700I GAANNNNTTC 3 cut(s) 257, 887, 1984
AspLEI GCGC 5 cut(s) 128, 463, 509, 1114, 1421
AspS9I GGNCC 1 cut(s) 1948
AsuC2I CCSGG 1 cut(s) 1845
AsuHPI GGTGA 2 cut(s) 497, 718
AvaI CYCGRG 1 cut(s) 1666
AvaII GGWCC 1 cut(s) 1948
AxyI CCTNAGG 2 cut(s) 170, 1293
BaeGI GKGCMC 1 cut(s) 498
BaeI ACNNNNGTAYC 2 cut(s) 1778, 1811
BanI GGYRCC 1 cut(s) 312
BanII GRGCYC 1 cut(s) 540
BauI CACGAG 1 cut(s) 539
BbsI GAAGAC 1 cut(s) 250
Bbv12I GWGCWC 5 cut(s) 8, 324, 934, 1225, 1305
BbvI GCAGC 6 cut(s) 123, 656, 1372, 1406, 1540, 1701
BccI CCATC 4 cut(s) 355, 485, 608, 797
BceAI ACGGC 1 cut(s) 775
BcgI CGANNNNNNTGC 4 cut(s) 220, 254, 1373, 1407
BciT130I CCWGG 1 cut(s) 379
BciVI GTATCC 1 cut(s) 1422
BclI TGATCA 2 cut(s) 303, 937
BcnI CCSGG 1 cut(s) 1845
BcoDI GTCTC 2 cut(s) 149, 1647
BfaI CTAG 2 cut(s) 317, 720
BfmI CTRYAG 3 cut(s) 1715, 1790, 1899
BfoI RGCGCY 3 cut(s) 510, 1115, 1422
BfuAI ACCTGC 1 cut(s) 1530
BfuI GTATCC 1 cut(s) 1422
BglII AGATCT 1 cut(s) 1908
BisI GCNGC 6 cut(s) 137, 645, 1361, 1395, 1554, 1715
BlsI GCNGC 6 cut(s) 138, 646, 1362, 1396, 1555, 1716
BmcAI AGTACT 1 cut(s) 1672
Bme1390I CCNGG 2 cut(s) 379, 1845
Bme18I GGWCC 1 cut(s) 1948
BmeT110I CYCGRG 1 cut(s) 1666
BmgT120I GGNCC 1 cut(s) 1948
BmiI GGNNCC 4 cut(s) 314, 1182, 1485, 1949
BmrFI CCNGG 2 cut(s) 379, 1845
BmsI GCATC 7 cut(s) 979, 1129, 1152, 1158, 1365, 1540, 1944
BpiI GAAGAC 1 cut(s) 250
BpuEI CTTGAG 3 cut(s) 131, 414, 1894
BpuMI CCSGG 1 cut(s) 1845
BsaAI YACGTR 2 cut(s) 199, 396
BsaBI GATNNNNATC 1 cut(s) 1379
BsaWI WCCGGW 1 cut(s) 1950
BsaXI ACNNNNNCTCC 2 cut(s) 1443, 1473
Bsc4I CCNNNNNNNGG 1 cut(s) 199
Bse1I ACTGG 1 cut(s) 990
Bse21I CCTNAGG 2 cut(s) 170, 1293
Bse3DI GCAATG 3 cut(s) 708, 1761, 1815
Bse8I GATNNNNATC 1 cut(s) 1379
BseBI CCWGG 1 cut(s) 379
BseGI GGATG 5 cut(s) 8, 994, 1144, 1939, 1959
BseJI GATNNNNATC 1 cut(s) 1379
BseLI CCNNNNNNNGG 1 cut(s) 199
BseMI GCAATG 3 cut(s) 708, 1761, 1815
BseMII CTCAG 2 cut(s) 161, 1284
BseNI ACTGG 1 cut(s) 990
BseRI GAGGAG 3 cut(s) 560, 1784, 1787
BseSI GKGCMC 1 cut(s) 498
BseXI GCAGC 6 cut(s) 123, 656, 1372, 1406, 1540, 1701
BseYI CCCAGC 1 cut(s) 509
BsgI GTGCAG 2 cut(s) 403, 1770
Bsh1236I CGCG 5 cut(s) 461, 527, 605, 1529, 1860
Bsh1285I CGRYCG 1 cut(s) 1501
BshFI GGCC 4 cut(s) 180, 277, 382, 447
BshNI GGYRCC 1 cut(s) 312
BsiEI CGRYCG 1 cut(s) 1501
BsiHKAI GWGCWC 5 cut(s) 8, 324, 934, 1225, 1305
BsiHKCI CYCGRG 1 cut(s) 1666
BsiSI CCGG 2 cut(s) 1845, 1951
BslFI GGGAC 3 cut(s) 788, 1015, 1961
BslI CCNNNNNNNGG 1 cut(s) 199
BsmAI GTCTC 2 cut(s) 149, 1647
BsmBI CGTCTC 2 cut(s) 149, 1647
BsmFI GGGAC 3 cut(s) 788, 1015, 1961
BsmI GAATGC 5 cut(s) 332, 379, 703, 1102, 1210
BsnI GGCC 4 cut(s) 180, 277, 382, 447
BsoBI CYCGRG 1 cut(s) 1666
Bsp1286I GDGCHC 7 cut(s) 8, 324, 498, 540, 934, 1225, 1305
Bsp143I GATC 7 cut(s) 303, 937, 1658, 1701, 1878, 1908, 1938
BspACI CCGC 7 cut(s) 203, 434, 992, 1032, 1036, 1497, 1957
BspANI GGCC 4 cut(s) 180, 277, 382, 447
BspCNI CTCAG 2 cut(s) 162, 1285
BspFNI CGCG 5 cut(s) 461, 527, 605, 1529, 1860
BspHI TCATGA 1 cut(s) 1636
BspLI GGNNCC 4 cut(s) 314, 1182, 1485, 1949
BspMAI CTGCAG 3 cut(s) 1719, 1794, 1903
BspMI ACCTGC 1 cut(s) 1530
BspPI GGATC 3 cut(s) 1666, 1709, 1886
BspT107I GGYRCC 1 cut(s) 312
BsrDI GCAATG 3 cut(s) 708, 1761, 1815
BsrI ACTGG 1 cut(s) 990
BssMI GATC 7 cut(s) 303, 937, 1658, 1701, 1878, 1908, 1938
BssNAI GTATAC 1 cut(s) 1924
BssSI CACGAG 1 cut(s) 539
Bst1107I GTATAC 1 cut(s) 1924
Bst2BI CACGAG 1 cut(s) 539
Bst2UI CCWGG 1 cut(s) 379
Bst4CI ACNGT 2 cut(s) 657, 1802
Bst6I CTCTTC 3 cut(s) 732, 1265, 1344
BstAPI GCANNNNNTGC 1 cut(s) 1139
BstBAI YACGTR 2 cut(s) 199, 396
BstDEI CTNAG 3 cut(s) 170, 1293, 1674
BstF5I GGATG 5 cut(s) 8, 994, 1144, 1939, 1959
BstFNI CGCG 5 cut(s) 461, 527, 605, 1529, 1860
BstH2I RGCGCY 3 cut(s) 510, 1115, 1422
BstHHI GCGC 5 cut(s) 128, 463, 509, 1114, 1421
BstKTI GATC 7 cut(s) 306, 940, 1661, 1704, 1881, 1911, 1941
BstMAI GTCTC 2 cut(s) 149, 1647
BstMBI GATC 7 cut(s) 303, 937, 1658, 1701, 1878, 1908, 1938
BstMCI CGRYCG 1 cut(s) 1501
BstMWI GCNNNNNNNGC 5 cut(s) 12, 228, 1120, 1139, 1214
BstNI CCWGG 1 cut(s) 379
BstNSI RCATGY 2 cut(s) 467, 1021
BstSCI CCNGG 2 cut(s) 377, 1843
BstSFI CTRYAG 3 cut(s) 1715, 1790, 1899
BstSLI GKGCMC 1 cut(s) 498
BstUI CGCG 5 cut(s) 461, 527, 605, 1529, 1860
BstV1I GCAGC 6 cut(s) 123, 656, 1372, 1406, 1540, 1701
BstV2I GAAGAC 1 cut(s) 250
BstX2I RGATCY 2 cut(s) 1878, 1908
BstYI RGATCY 2 cut(s) 1878, 1908
BstZ17I GTATAC 1 cut(s) 1924
Bsu36I CCTNAGG 2 cut(s) 170, 1293
BsuI GTATCC 1 cut(s) 1422
BsuRI GGCC 4 cut(s) 180, 277, 382, 447
BtgZI GCGATG 1 cut(s) 620
BtsCI GGATG 5 cut(s) 8, 994, 1144, 1939, 1959
BtsI GCAGTG 1 cut(s) 1787
BtsIMutI CAGTG 2 cut(s) 1787, 1807
BveI ACCTGC 1 cut(s) 1530
CciI TCATGA 1 cut(s) 1636
CfoI GCGC 5 cut(s) 128, 463, 509, 1114, 1421
Cfr13I GGNCC 1 cut(s) 1948
CseI GACGC 3 cut(s) 516, 1699, 1849
Csp6I GTAC 3 cut(s) 523, 1671, 1795
CviQI GTAC 3 cut(s) 523, 1671, 1795
DdeI CTNAG 3 cut(s) 170, 1293, 1674
DpnI GATC 7 cut(s) 305, 939, 1660, 1703, 1880, 1910, 1940
DpnII GATC 7 cut(s) 303, 937, 1658, 1701, 1878, 1908, 1938
Eam1104I CTCTTC 3 cut(s) 732, 1265, 1344
EarI CTCTTC 3 cut(s) 732, 1265, 1344
EciI GGCGGA 1 cut(s) 1051
Eco147I AGGCCT 2 cut(s) 382, 447
Eco24I GRGCYC 1 cut(s) 540
Eco32I GATATC 2 cut(s) 64, 783
Eco47I GGWCC 1 cut(s) 1948
Eco47III AGCGCT 2 cut(s) 508, 1113
Eco57I CTGAAG 1 cut(s) 1243
Eco81I CCTNAGG 2 cut(s) 170, 1293
Eco88I CYCGRG 1 cut(s) 1666
EcoRI GAATTC 1 cut(s) 1640
EcoRII CCWGG 1 cut(s) 377
EcoRV GATATC 2 cut(s) 64, 783
EcoT38I GRGCYC 1 cut(s) 540
Esp3I CGTCTC 2 cut(s) 149, 1647
FalI AAGNNNNNCTT 2 cut(s) 854, 886
FaqI GGGAC 3 cut(s) 788, 1015, 1961
FauI CCCGC 2 cut(s) 196, 1025
FauNDI CATATG 1 cut(s) 669
FbaI TGATCA 2 cut(s) 303, 937
FblI GTMKAC 2 cut(s) 1617, 1923
Fnu4HI GCNGC 6 cut(s) 137, 645, 1361, 1395, 1554, 1715
FokI GGATG 4 cut(s) 1001, 1151, 1946, 1966
FriOI GRGCYC 1 cut(s) 540
Fsp4HI GCNGC 6 cut(s) 137, 645, 1361, 1395, 1554, 1715
FspBI CTAG 2 cut(s) 317, 720
FspI TGCGCA 1 cut(s) 127
GlaI GCGC 5 cut(s) 127, 462, 508, 1113, 1420
GluI GCNGC 6 cut(s) 137, 645, 1361, 1395, 1554, 1715
GsaI CCCAGC 1 cut(s) 513
HaeII RGCGCY 3 cut(s) 510, 1115, 1422
HaeIII GGCC 4 cut(s) 180, 277, 382, 447
HapII CCGG 2 cut(s) 1845, 1951
HgaI GACGC 3 cut(s) 516, 1699, 1849
HhaI GCGC 5 cut(s) 128, 463, 509, 1114, 1421
Hin6I GCGC 5 cut(s) 126, 461, 507, 1112, 1419
HinP1I GCGC 5 cut(s) 126, 461, 507, 1112, 1419
HincII GTYRAC 1 cut(s) 1618
HindII GTYRAC 1 cut(s) 1618
HindIII AAGCTT 1 cut(s) 1808
HinfI GANTC 5 cut(s) 50, 514, 952, 1597, 1827
HpaII CCGG 2 cut(s) 1845, 1951
HphI GGTGA 2 cut(s) 497, 718
Hpy166II GTNNAC 4 cut(s) 115, 393, 1618, 1924
Hpy188I TCNGA 2 cut(s) 882, 1826
Hpy188III TCNNGA 6 cut(s) 214, 967, 1240, 1250, 1637, 1864
Hpy8I GTNNAC 4 cut(s) 115, 393, 1618, 1924
Hpy99I CGWCG 1 cut(s) 1693
HpyAV CCTTC 7 cut(s) 247, 437, 1326, 1525, 1570, 1771, 1974
HpyCH4III ACNGT 2 cut(s) 657, 1802
HpyCH4IV ACGT 5 cut(s) 142, 198, 395, 422, 1508
HpyF10VI GCNNNNNNNGC 5 cut(s) 12, 228, 1120, 1139, 1214
HpyF3I CTNAG 3 cut(s) 170, 1293, 1674
HpySE526I ACGT 5 cut(s) 142, 198, 395, 422, 1508
HspAI GCGC 5 cut(s) 126, 461, 507, 1112, 1419
Ksp22I TGATCA 2 cut(s) 303, 937
Kzo9I GATC 7 cut(s) 303, 937, 1658, 1701, 1878, 1908, 1938
LmnI GCTCC 5 cut(s) 504, 929, 1109, 1300, 1483
Lsp1109I GCAGC 6 cut(s) 123, 656, 1372, 1406, 1540, 1701
LweI GCATC 7 cut(s) 979, 1129, 1152, 1158, 1365, 1540, 1944
MaeI CTAG 2 cut(s) 317, 720
MaeII ACGT 5 cut(s) 142, 198, 395, 422, 1508
MaeIII GTNAC 2 cut(s) 617, 1861
MalI GATC 7 cut(s) 305, 939, 1660, 1703, 1880, 1910, 1940
MboI GATC 7 cut(s) 303, 937, 1658, 1701, 1878, 1908, 1938
MfeI CAATTG 1 cut(s) 1143
MflI RGATCY 2 cut(s) 1878, 1908
MhlI GDGCHC 7 cut(s) 8, 324, 498, 540, 934, 1225, 1305
MluCI AATT 7 cut(s) 873, 887, 1143, 1191, 1343, 1478, 1640
MluI ACGCGT 1 cut(s) 525
MlyI GAGTC 2 cut(s) 1606, 1836
MmeI TCCRAC 2 cut(s) 578, 1158
MroXI GAANNNNTTC 3 cut(s) 257, 887, 1984
MseI TTAA 4 cut(s) 471, 872, 1211, 1590
MslI CAYNNNNRTG 2 cut(s) 462, 1437
MspA1I CMGCKG 1 cut(s) 1497
MspI CCGG 2 cut(s) 1845, 1951
MspR9I CCNGG 2 cut(s) 379, 1845
MunI CAATTG 1 cut(s) 1143
Mva1269I GAATGC 5 cut(s) 332, 379, 703, 1102, 1210
MvaI CCWGG 1 cut(s) 379
MvnI CGCG 5 cut(s) 461, 527, 605, 1529, 1860
MwoI GCNNNNNNNGC 5 cut(s) 12, 228, 1120, 1139, 1214
NciI CCSGG 1 cut(s) 1845
NdeI CATATG 1 cut(s) 669
NdeII GATC 7 cut(s) 303, 937, 1658, 1701, 1878, 1908, 1938
NlaIV GGNNCC 4 cut(s) 314, 1182, 1485, 1949
NmeAIII GCCGAG 2 cut(s) 699, 1761
NmuCI GTSAC 1 cut(s) 1861
NsbI TGCGCA 1 cut(s) 127
NspI RCATGY 2 cut(s) 467, 1021
PagI TCATGA 1 cut(s) 1636
PceI AGGCCT 2 cut(s) 382, 447
PciI ACATGT 1 cut(s) 1017
PcsI WCGNNNNNNNCGW 2 cut(s) 765, 1514
PctI GAATGC 5 cut(s) 332, 379, 703, 1102, 1210
PdmI GAANNNNTTC 3 cut(s) 257, 887, 1984
PfeI GAWTC 3 cut(s) 50, 514, 952
PflMI CCANNNNNTGG 1 cut(s) 199
PkrI GCNGC 6 cut(s) 138, 646, 1362, 1396, 1555, 1716
PleI GAGTC 2 cut(s) 1605, 1835
PpsI GAGTC 2 cut(s) 1605, 1835
Ppu21I YACGTR 2 cut(s) 199, 396
PscI ACATGT 1 cut(s) 1017
PsiI TTATAA 1 cut(s) 663
Psp6I CCWGG 1 cut(s) 377
PspFI CCCAGC 1 cut(s) 509
PspGI CCWGG 1 cut(s) 377
PspN4I GGNNCC 4 cut(s) 314, 1182, 1485, 1949
PspPI GGNCC 1 cut(s) 1948
PstI CTGCAG 3 cut(s) 1719, 1794, 1903
PsuI RGATCY 2 cut(s) 1878, 1908
RsaI GTAC 3 cut(s) 524, 1672, 1796
RsaNI GTAC 3 cut(s) 523, 1671, 1795
RseI CAYNNNNRTG 2 cut(s) 462, 1437
SalI GTCGAC 1 cut(s) 1616
SaqAI TTAA 4 cut(s) 471, 872, 1211, 1590
SatI GCNGC 6 cut(s) 137, 645, 1361, 1395, 1554, 1715
Sau3AI GATC 7 cut(s) 303, 937, 1658, 1701, 1878, 1908, 1938
Sau96I GGNCC 1 cut(s) 1948
ScaI AGTACT 1 cut(s) 1672
SchI GAGTC 2 cut(s) 1606, 1836
ScrFI CCNGG 2 cut(s) 379, 1845
SduI GDGCHC 7 cut(s) 8, 324, 498, 540, 934, 1225, 1305
SfaNI GCATC 7 cut(s) 979, 1129, 1152, 1158, 1365, 1540, 1944
SfcI CTRYAG 3 cut(s) 1715, 1790, 1899
SinI GGWCC 1 cut(s) 1948
SmiMI CAYNNNNRTG 2 cut(s) 462, 1437
SmlI CTYRAG 3 cut(s) 146, 429, 1873
SmoI CTYRAG 3 cut(s) 146, 429, 1873
Sse9I AATT 7 cut(s) 873, 887, 1143, 1191, 1343, 1478, 1640
SseBI AGGCCT 2 cut(s) 382, 447
SsiI CCGC 7 cut(s) 203, 434, 992, 1032, 1036, 1497, 1957
SspI AATATT 3 cut(s) 298, 846, 979
SspMI CTAG 2 cut(s) 317, 720
StuI AGGCCT 2 cut(s) 382, 447
StyD4I CCNGG 2 cut(s) 377, 1843
TaaI ACNGT 2 cut(s) 657, 1802
TaiI ACGT 5 cut(s) 145, 201, 398, 425, 1511
TasI AATT 7 cut(s) 873, 887, 1143, 1191, 1343, 1478, 1640
TatI WGTACW 1 cut(s) 1670
TfiI GAWTC 3 cut(s) 50, 514, 952
Tru1I TTAA 4 cut(s) 471, 872, 1211, 1590
Tru9I TTAA 4 cut(s) 471, 872, 1211, 1590
TscAI CASTG 2 cut(s) 1794, 1807
TseFI GTSAC 1 cut(s) 1861
TseI GCWGC 6 cut(s) 136, 644, 1360, 1394, 1553, 1714
Tsp45I GTSAC 1 cut(s) 1861
TspDTI ATGAA 9 cut(s) 63, 386, 638, 944, 1283, 1589, 1625, 1653, 1977
TspGWI ACGGA 2 cut(s) 1671, 1736
TspRI CASTG 2 cut(s) 1794, 1807
Van91I CCANNNNNTGG 1 cut(s) 199
VpaK11BI GGWCC 1 cut(s) 1948
XapI RAATTY 2 cut(s) 887, 1640
XceI RCATGY 2 cut(s) 467, 1021
XmiI GTMKAC 2 cut(s) 1617, 1923
XmnI GAANNNNTTC 3 cut(s) 257, 887, 1984
XspI CTAG 2 cut(s) 317, 720
ZrmI AGTACT 1 cut(s) 1672
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.