RchiOBHm_Chr3g0457261

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0013694
Physical Location & Seq
Forward (+)
6459491 .. 6461749
2259 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ42401

Sequence Viewer

Length: 2019 bp
ATGAACACAACCACCACCACCACCACAAACCTTCCTCATCACATCAAACCAAAGGAAGCCTCACCAGAAACCAAACCTACCTTCAAGCTCTCCCAGAAAACAATCCTAGACATCTTGAGCACAAAATGCACCACTTCTCTACAAAACCTCAAGCAAGCCCATTGTGTTGTCCTGAGGTCAGGCCACTTTCAAGACCATTATGTAGCAGGCACCATACTAAAATGCTATGCAAGTCCTCACTTCAACGACTTTGGGTTTGCTTTGAAGGTGTTTGATAATGTGTGGAGGCCAAATGTGTTTGTTTGGAACATTATGATCAAAGGGTGTGTGGAGAACTATGAGGCACTGCAAGCTATTTCATGTTATTGTAAGATGGTGGATATGAATTCCAGGCCTAACAAGTTCACCTATCCCATGTTGTTCAAGGCCTGCAGATTAGTTCAAGCAGTGGAGGAAGGTCTCCAAATTCATGCACATGTGGTGAAGCAGCAGCTTAGTGAAGATGGGCACATAAGAAGTGCTGGGATTCAAATGTATGCGTCTTTCGGGCTTGTGGAGGAGGCAAGGAGGATATTGCTAGACAACGCGGCGTCGTCTGATGTTGTTTGTTGGAATGCAATGATTGATGGGTACATGAAATGTGGGGATGCAGAAGCAGCTAAGGAGTTGTTTGATAAGCACATGCCAATTAAGAATGTTGGGTCTTGGAATGCAATGGTGAGTGGTTTTGCTAAGTGTGGGAGGTTGACAGATGCAAGGGCGGTGTTTGATGAAATGATTGAGAGAGATGAGATTTCTTGGAGTGCTATGATTGATGGTTATGTGCAAGGAGGGTATCACAAGGAGGCATTGGAAGTTTTCAATGAGATGCAAAAGGAGAAGATTGTTAGTCCAAGGAAATTCGTATTGTCGAGTGTGTTAGCTGCTTGTGCCAATGTGGGAGCACTTGATCAAGGAAAGTGGATTCATGGTTATATTAAGAAGAACTCAATTCAGGTGGATGCACTACTGGGGACTGCTTTAGTTGATATGTATGCCAAATGTGGGAGGCTTGACATGGCATGGGAAGTGTTTGAAAATGTGAAACAGAAAGAGGTTTCGACATGGAATGCCATGATTGGTGGGCTTGCTATGCACGGCCGAGCAGATGATGCATTGGATGTTTTCTTCAAGATGCAAGGGAATAATTTGGAACCAAATGGGATTACTTTTCTGAATGCTCTAAGTGCTTGTGCTCATGGGGGTTTTGTTGATGAAGGTCTTACAATTTTCAGTTCTATGAAGGAAATGTATGGTATGGAGGCTGAGGTAGAGCACTATGGTTGTGTGGTTGATATGTTTGGAAGGGCAGGACTTTTGGAAGAGGCAGAGCAGGTTATAAATTCAATGCCAATTGAACCTAGTGCAGCTGTTTATGGTGCCCTGTTAGGCGCTTGCAGGATACATGGAAATGTTGAAATGGGTGAGAGAGTAGGGAGGATTTTGCTTGAATTGGAACCGCAAAACAGTGGACGTTACGCGTTGTTATCTAACATCTATGCAAAGGCAGGTATGTGGGACGATGTTGCAGAGGTAAGAAAATTGATGAAGGAAAGGGGAGTAAAGACTATTCCTGGAATTAGCATGGTTGATATTGGTGGCAAAGTACATGAATTCAAAATGGGAGATGGGTCACACCCACAAATGAAGGAGGTCTACTTGATGCTTGAAAAGATTATAGAAAAGCTGGAGACAGAGGGTTATTCACCGAATACATCTCAAGTTTTGTTTGACATTGCAGAGGAGGAGAAGGAAACAGCACTGCGGTACCACAGTGAGAAGCTTGCAATTGCTTTCGGAGTACTTAACACAAAACCTGGAACAACCATCCGGGTTGTGAAGAACTTGAGGATTTGTGAGGACTGTCATTCTGCCATAAAGCTCTTTTCACAATCATACAACCGGGATATAATTGTGAGGGACCGTATGCGCTATCATCATTTTAGAAATGGACGGTGTTCGTGCAAGGATTTTTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

672

Amino Acids

75.35

Weight (kDa)

6.36

Isoelectric Point (pI)

38.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 97 - 144 7.6e-10 PPR repeat family
PPR_2 PF13041 200 - 225 5.1e-06 PPR repeat family
PPR PF01535 202 - 226 6.7e-06 PPR repeat
PPR PF01535 235 - 262 4.5e-07 PPR repeat
PPR_2 PF13041 263 - 295 1.1e-06 PPR repeat family
PPR PF01535 265 - 294 1.4e-08 PPR repeat
PPR_2 PF13041 366 - 412 1.4e-08 PPR repeat family
PPR PF01535 367 - 396 5.2e-07 PPR repeat
E_motif PF20431 482 - 543 4.9e-22 E motif
DYW_deaminase PF14432 580 - 672 2.1e-40 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1379
Acc36I ACCTGC 2 cut(s) 1363, 1538
Acc65I GGTACC 1 cut(s) 1806
AccB1I GGYRCC 3 cut(s) 209, 1418, 1806
AccI GTMKAC 1 cut(s) 1695
AccII CGCG 2 cut(s) 587, 1520
AciI CCGC 4 cut(s) 587, 761, 1499, 1804
AcoI YGGCCR 1 cut(s) 1138
AcsI RAATTY 5 cut(s) 385, 465, 899, 1381, 1652
AcyI GRCGYC 1 cut(s) 590
AfaI GTAC 4 cut(s) 632, 1647, 1808, 1842
AfiI CCNNNNNNNGG 1 cut(s) 1044
AflIII ACRYGT 2 cut(s) 475, 1518
AjnI CCWGG 3 cut(s) 389, 1612, 1855
AjuI GAANNNNNNNTTGG 2 cut(s) 65, 97
AluBI AGCT 9 cut(s) 88, 353, 493, 659, 923, 1409, 1726, 1822, 1921
AluI AGCT 9 cut(s) 88, 353, 493, 659, 923, 1409, 1726, 1822, 1921
Alw21I GWGCWC 4 cut(s) 122, 946, 1237, 1317
Alw26I GTCTC 2 cut(s) 464, 1724
AoxI GGCC 5 cut(s) 181, 287, 392, 426, 1138
ApeKI GCWGC 5 cut(s) 487, 490, 656, 923, 1406
ApoI RAATTY 5 cut(s) 385, 465, 899, 1381, 1652
ArsI GACNNNNNNTTYG 2 cut(s) 239, 271
Asp718I GGTACC 1 cut(s) 1806
AspLEI GCGC 2 cut(s) 1433, 1971
AspS9I GGNCC 1 cut(s) 1960
AsuC2I CCSGG 2 cut(s) 1871, 1943
AsuHPI GGTGA 6 cut(s) 54, 397, 493, 730, 1475, 1737
AvaII GGWCC 1 cut(s) 1960
AxyI CCTNAGG 1 cut(s) 173
BaeGI GKGCMC 2 cut(s) 510, 1423
BaeI ACNNNNGTAYC 4 cut(s) 1790, 1798, 1823, 1831
BanI GGYRCC 3 cut(s) 209, 1418, 1806
BarI GAAGNNNNNNTAC 2 cut(s) 1679, 1711
Bbv12I GWGCWC 4 cut(s) 122, 946, 1237, 1317
BbvCI CCTCAGC 1 cut(s) 1305
BbvI GCAGC 5 cut(s) 499, 502, 668, 910, 1418
BccI CCATC 6 cut(s) 367, 497, 620, 809, 1661, 1874
BceAI ACGGC 1 cut(s) 1153
BciT130I CCWGG 3 cut(s) 391, 1614, 1857
BciVI GTATCC 1 cut(s) 1434
BclI TGATCA 2 cut(s) 315, 949
BcnI CCSGG 2 cut(s) 1871, 1943
BcoDI GTCTC 2 cut(s) 464, 1724
BfaI CTAG 3 cut(s) 107, 578, 1401
BfmI CTRYAG 1 cut(s) 430
BfoI RGCGCY 1 cut(s) 1434
BfuAI ACCTGC 2 cut(s) 1363, 1538
BfuI GTATCC 1 cut(s) 1434
BisI GCNGC 6 cut(s) 488, 491, 588, 657, 924, 1407
BlsI GCNGC 6 cut(s) 489, 492, 589, 658, 925, 1408
BmcAI AGTACT 1 cut(s) 1842
Bme1390I CCNGG 5 cut(s) 391, 1614, 1857, 1871, 1943
Bme18I GGWCC 1 cut(s) 1960
BmgT120I GGNCC 1 cut(s) 1960
BmiI GGNNCC 6 cut(s) 211, 1194, 1420, 1497, 1808, 1961
BmrFI CCNGG 5 cut(s) 391, 1614, 1857, 1871, 1943
BmrI ACTGGG 1 cut(s) 1019
BmsI GCATC 7 cut(s) 637, 742, 858, 991, 1141, 1164, 1692
BmuI ACTGGG 1 cut(s) 1019
BpmI CTGGAG 1 cut(s) 1748
Bpu10I CCTNAGC 2 cut(s) 660, 1305
BpuEI CTTGAG 4 cut(s) 134, 136, 1743, 1906
BpuMI CCSGG 2 cut(s) 1871, 1943
BsaHI GRCGYC 1 cut(s) 590
BsaI GGTCTC 1 cut(s) 464
BsaJI CCNNGG 1 cut(s) 893
Bsc4I CCNNNNNNNGG 1 cut(s) 1044
Bse1I ACTGG 1 cut(s) 1014
Bse21I CCTNAGG 1 cut(s) 173
Bse3DI GCAATG 3 cut(s) 624, 720, 1773
BseBI CCWGG 3 cut(s) 391, 1614, 1857
BseDI CCNNGG 1 cut(s) 893
BseGI GGATG 4 cut(s) 652, 1006, 1165, 1866
BseLI CCNNNNNNNGG 1 cut(s) 1044
BseMI GCAATG 3 cut(s) 624, 720, 1773
BseMII CTCAG 2 cut(s) 164, 1296
BseNI ACTGG 1 cut(s) 1014
BseRI GAGGAG 3 cut(s) 572, 1796, 1799
BseSI GKGCMC 2 cut(s) 510, 1423
BseX3I CGGCCG 1 cut(s) 1138
BseXI GCAGC 5 cut(s) 499, 502, 668, 910, 1418
BseYI CCCAGC 1 cut(s) 521
BsgI GTGCAG 1 cut(s) 1425
Bsh1236I CGCG 2 cut(s) 587, 1520
Bsh1285I CGRYCG 1 cut(s) 1141
BshFI GGCC 5 cut(s) 183, 289, 394, 428, 1140
BshNI GGYRCC 3 cut(s) 209, 1418, 1806
BsiEI CGRYCG 1 cut(s) 1141
BsiHKAI GWGCWC 4 cut(s) 122, 946, 1237, 1317
BsiSI CCGG 2 cut(s) 1870, 1942
BslFI GGGAC 3 cut(s) 1027, 1571, 1973
BslI CCNNNNNNNGG 1 cut(s) 1044
BsmAI GTCTC 2 cut(s) 464, 1724
BsmFI GGGAC 3 cut(s) 1027, 1571, 1973
BsmI GAATGC 4 cut(s) 619, 715, 1114, 1222
BsnI GGCC 5 cut(s) 183, 289, 394, 428, 1140
Bso31I GGTCTC 1 cut(s) 464
Bsp1286I GDGCHC 6 cut(s) 122, 510, 946, 1237, 1317, 1423
Bsp143I GATC 2 cut(s) 315, 949
BspACI CCGC 4 cut(s) 587, 761, 1499, 1804
BspANI GGCC 5 cut(s) 183, 289, 394, 428, 1140
BspCNI CTCAG 2 cut(s) 165, 1297
BspFNI CGCG 2 cut(s) 587, 1520
BspLI GGNNCC 6 cut(s) 211, 1194, 1420, 1497, 1808, 1961
BspMAI CTGCAG 1 cut(s) 434
BspMI ACCTGC 2 cut(s) 1363, 1538
BspT107I GGYRCC 3 cut(s) 209, 1418, 1806
BspTNI GGTCTC 1 cut(s) 464
BsrDI GCAATG 3 cut(s) 624, 720, 1773
BsrI ACTGG 1 cut(s) 1014
BssECI CCNNGG 1 cut(s) 893
BssMI GATC 2 cut(s) 315, 949
BssNI GRCGYC 1 cut(s) 590
BssT1I CCWWGG 1 cut(s) 893
Bst2UI CCWGG 3 cut(s) 391, 1614, 1857
Bst4CI ACNGT 5 cut(s) 1508, 1814, 1904, 1964, 1995
Bst6I CTCTTC 1 cut(s) 1356
BstACI GRCGYC 1 cut(s) 590
BstAPI GCANNNNNTGC 2 cut(s) 126, 1151
BstC8I GCNNGC 7 cut(s) 156, 208, 351, 430, 1128, 1435, 1824
BstDEI CTNAG 6 cut(s) 173, 494, 660, 732, 1223, 1305
BstF5I GGATG 4 cut(s) 652, 1006, 1165, 1866
BstFNI CGCG 2 cut(s) 587, 1520
BstH2I RGCGCY 1 cut(s) 1434
BstHHI GCGC 2 cut(s) 1433, 1971
BstKTI GATC 2 cut(s) 318, 952
BstMAI GTCTC 2 cut(s) 464, 1724
BstMBI GATC 2 cut(s) 315, 949
BstMCI CGRYCG 1 cut(s) 1141
BstMWI GCNNNNNNNGC 7 cut(s) 126, 350, 656, 929, 1132, 1151, 1226
BstNI CCWGG 3 cut(s) 391, 1614, 1857
BstNSI RCATGY 2 cut(s) 479, 685
BstSCI CCNGG 5 cut(s) 389, 1612, 1855, 1869, 1941
BstSFI CTRYAG 1 cut(s) 430
BstSLI GKGCMC 2 cut(s) 510, 1423
BstUI CGCG 2 cut(s) 587, 1520
BstV1I GCAGC 5 cut(s) 499, 502, 668, 910, 1418
BstZI CGGCCG 1 cut(s) 1138
Bsu36I CCTNAGG 1 cut(s) 173
BsuI GTATCC 1 cut(s) 1434
BsuRI GGCC 5 cut(s) 183, 289, 394, 428, 1140
BtsCI GGATG 4 cut(s) 652, 1006, 1165, 1866
BtsI GCAGTG 3 cut(s) 344, 453, 1799
BtsIMutI CAGTG 5 cut(s) 344, 453, 1513, 1799, 1819
BveI ACCTGC 2 cut(s) 1363, 1538
Cac8I GCNNGC 7 cut(s) 156, 208, 351, 430, 1128, 1435, 1824
CfoI GCGC 2 cut(s) 1433, 1971
Cfr13I GGNCC 1 cut(s) 1960
CseI GACGC 2 cut(s) 528, 579
Csp6I GTAC 4 cut(s) 631, 1646, 1807, 1841
CspCI CAANNNNNGTGG 4 cut(s) 941, 976, 978, 1013
CviQI GTAC 4 cut(s) 631, 1646, 1807, 1841
DdeI CTNAG 6 cut(s) 173, 494, 660, 732, 1223, 1305
DpnI GATC 2 cut(s) 317, 951
DpnII GATC 2 cut(s) 315, 949
EaeI YGGCCR 1 cut(s) 1138
EagI CGGCCG 1 cut(s) 1138
Eam1104I CTCTTC 1 cut(s) 1356
EarI CTCTTC 1 cut(s) 1356
EclXI CGGCCG 1 cut(s) 1138
Eco130I CCWWGG 1 cut(s) 893
Eco147I AGGCCT 2 cut(s) 394, 428
Eco31I GGTCTC 1 cut(s) 464
Eco47I GGWCC 1 cut(s) 1960
Eco52I CGGCCG 1 cut(s) 1138
Eco81I CCTNAGG 1 cut(s) 173
EcoRI GAATTC 2 cut(s) 385, 1652
EcoRII CCWGG 3 cut(s) 389, 1612, 1855
EcoT14I CCWWGG 1 cut(s) 893
EcoT22I ATGCAT 1 cut(s) 1156
ErhI CCWWGG 1 cut(s) 893
FaqI GGGAC 3 cut(s) 1027, 1571, 1973
FbaI TGATCA 2 cut(s) 315, 949
FblI GTMKAC 1 cut(s) 1695
Fnu4HI GCNGC 6 cut(s) 488, 491, 588, 657, 924, 1407
FokI GGATG 4 cut(s) 659, 1013, 1172, 1853
Fsp4HI GCNGC 6 cut(s) 488, 491, 588, 657, 924, 1407
FspBI CTAG 3 cut(s) 107, 578, 1401
GlaI GCGC 2 cut(s) 1432, 1970
GluI GCNGC 6 cut(s) 488, 491, 588, 657, 924, 1407
GsaI CCCAGC 1 cut(s) 525
GsuI CTGGAG 1 cut(s) 1748
HaeII RGCGCY 1 cut(s) 1434
HaeIII GGCC 5 cut(s) 183, 289, 394, 428, 1140
HapII CCGG 2 cut(s) 1870, 1942
HgaI GACGC 2 cut(s) 528, 579
HhaI GCGC 2 cut(s) 1433, 1971
Hin1I GRCGYC 1 cut(s) 590
Hin6I GCGC 2 cut(s) 1431, 1969
HinP1I GCGC 2 cut(s) 1431, 1969
HincII GTYRAC 1 cut(s) 747
HindII GTYRAC 1 cut(s) 747
HindIII AAGCTT 1 cut(s) 1820
HinfI GANTC 2 cut(s) 526, 964
HpaII CCGG 2 cut(s) 1870, 1942
HphI GGTGA 6 cut(s) 54, 397, 493, 730, 1475, 1737
Hpy166II GTNNAC 4 cut(s) 405, 747, 1511, 1696
Hpy188I TCNGA 3 cut(s) 598, 1215, 1838
Hpy188III TCNNGA 4 cut(s) 115, 172, 191, 1171
Hpy8I GTNNAC 4 cut(s) 405, 747, 1511, 1696
Hpy99I CGWCG 1 cut(s) 595
HpyCH4III ACNGT 5 cut(s) 1508, 1814, 1904, 1964, 1995
HpyCH4IV ACGT 1 cut(s) 1513
HpyF10VI GCNNNNNNNGC 7 cut(s) 126, 350, 656, 929, 1132, 1151, 1226
HpyF3I CTNAG 6 cut(s) 173, 494, 660, 732, 1223, 1305
HpySE526I ACGT 1 cut(s) 1513
Hsp92I GRCGYC 1 cut(s) 590
HspAI GCGC 2 cut(s) 1431, 1969
KpnI GGTACC 1 cut(s) 1810
Ksp22I TGATCA 2 cut(s) 315, 949
Kzo9I GATC 2 cut(s) 315, 949
LmnI GCTCC 1 cut(s) 941
Lsp1109I GCAGC 5 cut(s) 499, 502, 668, 910, 1418
LweI GCATC 7 cut(s) 637, 742, 858, 991, 1141, 1164, 1692
MaeI CTAG 3 cut(s) 107, 578, 1401
MaeII ACGT 1 cut(s) 1513
MaeIII GTNAC 2 cut(s) 1514, 1671
MalI GATC 2 cut(s) 317, 951
MboI GATC 2 cut(s) 315, 949
MboII GAAGA 6 cut(s) 512, 892, 994, 1159, 1373, 1891
MfeI CAATTG 2 cut(s) 1392, 1827
MhlI GDGCHC 6 cut(s) 122, 510, 946, 1237, 1317, 1423
MluI ACGCGT 1 cut(s) 1518
MmeI TCCRAC 1 cut(s) 590
Mph1103I ATGCAT 1 cut(s) 1156
MseI TTAA 3 cut(s) 690, 978, 1845
MslI CAYNNNNRTG 2 cut(s) 474, 1449
MspA1I CMGCKG 1 cut(s) 1409
MspI CCGG 2 cut(s) 1870, 1942
MspR9I CCNGG 5 cut(s) 391, 1614, 1857, 1871, 1943
MunI CAATTG 2 cut(s) 1392, 1827
Mva1269I GAATGC 4 cut(s) 619, 715, 1114, 1222
MvaI CCWGG 3 cut(s) 391, 1614, 1857
MvnI CGCG 2 cut(s) 587, 1520
MwoI GCNNNNNNNGC 7 cut(s) 126, 350, 656, 929, 1132, 1151, 1226
NciI CCSGG 2 cut(s) 1871, 1943
NdeII GATC 2 cut(s) 315, 949
NlaIV GGNNCC 6 cut(s) 211, 1194, 1420, 1497, 1808, 1961
NmeAIII GCCGAG 1 cut(s) 1166
NmuCI GTSAC 1 cut(s) 1671
NsiI ATGCAT 1 cut(s) 1156
NspI RCATGY 2 cut(s) 479, 685
PceI AGGCCT 2 cut(s) 394, 428
PciI ACATGT 1 cut(s) 475
PctI GAATGC 4 cut(s) 619, 715, 1114, 1222
PfeI GAWTC 2 cut(s) 526, 964
PfoI TCCNGGA 1 cut(s) 1612
PkrI GCNGC 6 cut(s) 489, 492, 589, 658, 925, 1408
PscI ACATGT 1 cut(s) 475
PsiI TTATAA 1 cut(s) 1379
Psp6I CCWGG 3 cut(s) 389, 1612, 1855
PspFI CCCAGC 1 cut(s) 521
PspGI CCWGG 3 cut(s) 389, 1612, 1855
PspN4I GGNNCC 6 cut(s) 211, 1194, 1420, 1497, 1808, 1961
PspPI GGNCC 1 cut(s) 1960
PstI CTGCAG 1 cut(s) 434
PvuII CAGCTG 1 cut(s) 1409
RsaI GTAC 4 cut(s) 632, 1647, 1808, 1842
RsaNI GTAC 4 cut(s) 631, 1646, 1807, 1841
RseI CAYNNNNRTG 2 cut(s) 474, 1449
SaqAI TTAA 3 cut(s) 690, 978, 1845
SatI GCNGC 6 cut(s) 488, 491, 588, 657, 924, 1407
Sau3AI GATC 2 cut(s) 315, 949
Sau96I GGNCC 1 cut(s) 1960
ScaI AGTACT 1 cut(s) 1842
ScrFI CCNGG 5 cut(s) 391, 1614, 1857, 1871, 1943
SduI GDGCHC 6 cut(s) 122, 510, 946, 1237, 1317, 1423
SfaNI GCATC 7 cut(s) 637, 742, 858, 991, 1141, 1164, 1692
SfcI CTRYAG 1 cut(s) 430
SinI GGWCC 1 cut(s) 1960
SmiMI CAYNNNNRTG 2 cut(s) 474, 1449
SmlI CTYRAG 4 cut(s) 115, 149, 1758, 1885
SmoI CTYRAG 4 cut(s) 115, 149, 1758, 1885
SseBI AGGCCT 2 cut(s) 394, 428
SsiI CCGC 4 cut(s) 587, 761, 1499, 1804
SspMI CTAG 3 cut(s) 107, 578, 1401
StuI AGGCCT 2 cut(s) 394, 428
StyD4I CCNGG 5 cut(s) 389, 1612, 1855, 1869, 1941
StyI CCWWGG 1 cut(s) 893
TaaI ACNGT 5 cut(s) 1508, 1814, 1904, 1964, 1995
TaiI ACGT 1 cut(s) 1516
TaqI TCGA 2 cut(s) 911, 1100
TatI WGTACW 2 cut(s) 1645, 1840
TauI GCSGC 1 cut(s) 590
TfiI GAWTC 2 cut(s) 526, 964
Tru1I TTAA 3 cut(s) 690, 978, 1845
Tru9I TTAA 3 cut(s) 690, 978, 1845
TscAI CASTG 5 cut(s) 351, 453, 1513, 1806, 1819
TseFI GTSAC 1 cut(s) 1671
TseI GCWGC 5 cut(s) 487, 490, 656, 923, 1406
Tsp45I GTSAC 1 cut(s) 1671
TspRI CASTG 5 cut(s) 351, 453, 1513, 1806, 1819
VpaK11BI GGWCC 1 cut(s) 1960
XapI RAATTY 5 cut(s) 385, 465, 899, 1381, 1652
XceI RCATGY 2 cut(s) 479, 685
XmiI GTMKAC 1 cut(s) 1695
XspI CTAG 3 cut(s) 107, 578, 1401
ZrmI AGTACT 1 cut(s) 1842
Zsp2I ATGCAT 1 cut(s) 1156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.