Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0009697

Physical Location & Seq

Genomic Coordinates Reverse (-)

8203233 .. 8208276

Gene Structure 5044 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g13540.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2022 bp

ATGGTACCACAGAGGAAGGTGGATTATGGCTTCAATGGCTACCAAATGCCTGAGGTTCCTCGAGCTTCTAGATCAGCTAGGGGAAAGGGACCTATAAGGAAGAAACTTGAAGACAATCAGATTCATGCATTTGAGATTTTGGCTAGTGTAGCGGGTAAACTTTTGGAGAGTGAAAATCCTCTACCTAGTAATGCTTCTTGTGGAAAGGATCCTCATTACATGGTTGATGATATCATAGGGAAGCAACAGACTGAAGGAAACTCATTGAAGGAAGAACTGTGTGAGTTGGGAAGCTGGGAAGATGAAGCCTCTCAACTTGCCTGTGGGGTGCAAGGTCACCAACAAAGTCATACTCTGAATCAGTTCTCACATCCACAAGAAAACTTCAGTTTTGAGATGAGCGCAACATCAAAAAGTAATGATCACTTGGGGAAGGTTTGTTTTGCTAAAAAGTTGGGTACAGTTGATAGCAGTTCTTCTTGTGGAAGCTATTCTAACAAAGTAATCAGTGACTGTCCCTTATCTGGGGATTTGATTGATGAGGAAGAGAAAGCACATGCTGTACAAAAGAGGAAACTAGAGGCTGAACCTTCAAAGGATACAAACATAAAGGATGCAAATGCCCATGTTTTAGTCTGTTCAGAAGATTGGATAGAAATGAAAGGAAACCCTCCTGAACTGGTCAGTTCTGAACATGATGTAAAGGAGCCTTTCTCAGGGGACTGCAAAATTCATGGTTCTTTCCTCTGCCATTGTGTTAAAGTAATTAGTAGAGATGATGACGAAAATTCTGTTGGGTATGTCCAACCCTGTACCATCATAGAGGAGTTTGAGCACAAACCAAATGTTGGTGATAGGAAAATAAAGAATATGTCGGCATCCAAGCGCTGGAGAATAGCTCCAGATATGAAGATTGGGGGTTATCATAGAACTGATGGGAAAGTTTACCGTAATGGGAGACCTTGTTACGCGCATCAAAGATCACAGAAGAATTATCCTTTTAAGAAGAGAAAGTTCTTTAACCAGAAGCCATTTGCTACGTCTGATAGAGACTGTAACTGTGAAAACATAGTTAGTTCTCCTGACAACAGAGAGGACGGTGGCAACTGTAATGCAGCAAGTGGACGGTCATCCTCAGCAACAGGTCGAGAACCTCTCAAGTCCAGTGATCGTAATGTGAGGCTTAGTATTAAATCCTTCAAAGTTCCCGAGCTTTTCTTTGAAATTCCCGCAACTGCAACTGTCGGTTCTTTGAAGAGGACAGTAATGGAGGCAGTAACTTCTATACTTGGAGATGGACTACATGTTGGTATGCTGCTTCAGGGAAAGAAGGTCAGAGATGACAACAAAACATTACTTCAGACTGGGATTTCGCATGATGACAAGCTTGACAATTTGGGTTTCTCCTTGGAGCCCAAACATACAAAGCTGATGTATTCTCAATGCGGCGATGATCCTTCCTCTGTATCTGGCAGACGCCAGGAGTTAATTAGGCATTCGTCTTTGGTCTCACGACCAAGGACTTCAAATATCTCTCTGAATCCTCCGATAATCAATTTGGGCAGCAGTGTTGACAAAGACTTAAAAGCAGTACTCCCTCCTGCTAGTACTTCAATTGACAAATCTCCACCAGTATCCCAAGCTCTGGTTGCAGTTCCACCAATTACCGCAAAGCCACTGGCTGTGGTTCCTTTTCATAGGAGATCTGGGCATTCAGCATATGTACAGCGCCGGATGAGGAGACCTTTCTCTGTTTCAGAAGTAGAAGCATTGGTTCAGGCTGTTGAGAAACTTGGAACGGGAAGGTGGCGTGATGTTAAAATGCATGCTTTTGATAATGCAAAACATCGTACTTATGTGGATTTGAAGGACAAGTGGAAAACATTGGTGCACACAGCAAGGATCTCACCTCAGCAAAGGAGAGGAGAACCAGTTCCTCAGGAGCTTTTGGACAGAGTCCTAGCCGCACATGCCTATTGGTCTCAACGGCAAGCCAAGCAACAGCTCAGAGTAGCGGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000723 GO:0000781 GO:0000782 GO:0000783 GO:0000784 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003691 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0031627 GO:0031974 GO:0031981 GO:0032200 GO:0032991 GO:0032993 GO:0034641 GO:0042162 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0051276 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098687 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

674

Amino Acids

74.85

Weight (kDa)

8.95

Isoelectric Point (pI)

51.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ubiquitin_TPR1	PF23603	392 - 460	2.7e-38	Telomere repeat-binding protein 1-like, ubiquitin-like domain
Myb_DNA-binding	PF00249	580 - 629	5.4e-06	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009697)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g13540 FvH4_6g13540
malus_domestica	MD04G1130300.v1.1 MD12G1143400.v1.1
prunus_persica	Prupe.6G256900_v2.0.a1 Prupe.6G256900_v2.0.a1 Prupe.6G256900_v2.0.a1 Prupe.6G256900_v2.0.a1
pyrus_communis	pycom12g13810
rosa_chinensis	RchiOBHm_Chr3g0466401
rosa_laevigata	RLG00000024577
rosa_multiflora	Rmu_sc0001716.1_g000002 Rmu_sc0003332.1_g000029 Rmu_sc0003480.1_g000002
rosa_roxburghii	Rroxscaffold_6G00414500
rosa_rugosa	Rorug03G0081500 Rorug03G0081600 Rorug03G0081700
rosa_samantha	Rh3AG128100 Rh3BG149400 Rh3DG150100
rosa_wichuraiana	Rw3G012100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	4
AccB1I	GGYRCC	1 cut(s)	4
AccB7I	CCANNNNNTGG	3 cut(s)	848, 888, 1645
AccII	CGCG	1 cut(s)	971
AciI	CCGC	6 cut(s)	152, 1230, 1446, 1668, 1965, 2015
AclWI	GGATC	4 cut(s)	203, 216, 1448, 1910
AcsI	RAATTY	3 cut(s)	729, 787, 1224
AcuI	CTGAAG	4 cut(s)	273, 370, 1304, 1343
AcyI	GRCGYC	1 cut(s)	1477
AfaI	GTAC	8 cut(s)	6, 460, 564, 814, 1593, 1609, 1725, 1852
AfeI	AGCGCT	1 cut(s)	887
AfiI	CCNNNNNNNGG	6 cut(s)	524, 525, 716, 848, 888, 1645
AflIII	ACRYGT	1 cut(s)	1303
AjnI	CCWGG	1 cut(s)	1479
AjuI	GAANNNNNNNTTGG	2 cut(s)	777, 809
AloI	GAACNNNNNNTCC	2 cut(s)	1917, 1949
Alw21I	GWGCWC	2 cut(s)	837, 1893
Alw26I	GTCTC	5 cut(s)	952, 1044, 1513, 1735, 1986
Alw44I	GTGCAC	1 cut(s)	1889
AlwI	GGATC	4 cut(s)	203, 216, 1448, 1910
AlwNI	CAGNNNCTG	1 cut(s)	513
Ama87I	CYCGRG	2 cut(s)	60, 1208
Aor51HI	AGCGCT	1 cut(s)	887
ApaLI	GTGCAC	1 cut(s)	1889
ApeKI	GCWGC	3 cut(s)	1115, 1315, 1563
ApoI	RAATTY	3 cut(s)	729, 787, 1224
ArsI	GACNNNNNNTTYG	2 cut(s)	1354, 1386
Asp700I	GAANNNNTTC	3 cut(s)	362, 490, 1932
Asp718I	GGTACC	1 cut(s)	4
AspLEI	GCGC	4 cut(s)	404, 888, 973, 1731
AspS9I	GGNCC	1 cut(s)	89
AsuHPI	GGTGA	3 cut(s)	329, 863, 1899
AvaI	CYCGRG	2 cut(s)	60, 1208
AvaII	GGWCC	1 cut(s)	89
AxyI	CCTNAGG	2 cut(s)	51, 1938
BaeGI	GKGCMC	1 cut(s)	1893
BamHI	GGATCC	1 cut(s)	208
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	1 cut(s)	1416
BbsI	GAAGAC	1 cut(s)	117
Bbv12I	GWGCWC	2 cut(s)	837, 1893
BbvCI	CCTCAGC	2 cut(s)	1135, 1911
BbvI	GCAGC	3 cut(s)	1127, 1302, 1575
BccI	CCATC	3 cut(s)	824, 929, 1289
BceAI	ACGGC	1 cut(s)	2003
BciT130I	CCWGG	1 cut(s)	1481
BciVI	GTATCC	2 cut(s)	592, 1645
BclI	TGATCA	1 cut(s)	421
BcoDI	GTCTC	5 cut(s)	952, 1044, 1513, 1735, 1986
BfaI	CTAG	7 cut(s)	69, 78, 144, 186, 578, 1605, 1961
BfoI	RGCGCY	2 cut(s)	889, 1732
BfuI	GTATCC	2 cut(s)	592, 1645
BglII	AGATCT	1 cut(s)	1703
BisI	GCNGC	6 cut(s)	1116, 1316, 1447, 1564, 1965, 2016
BlsI	GCNGC	6 cut(s)	1117, 1317, 1448, 1565, 1966, 2017
BmcAI	AGTACT	2 cut(s)	1593, 1609
Bme1390I	CCNGG	1 cut(s)	1481
Bme18I	GGWCC	1 cut(s)	89
BmeT110I	CYCGRG	2 cut(s)	60, 1208
BmgT120I	GGNCC	1 cut(s)	89
BmiI	GGNNCC	7 cut(s)	6, 57, 90, 210, 708, 1413, 1689
BmrFI	CCNGG	1 cut(s)	1481
BmrI	ACTGGG	1 cut(s)	1374
BmsI	GCATC	3 cut(s)	604, 887, 982
BmuI	ACTGGG	1 cut(s)	1374
BpiI	GAAGAC	1 cut(s)	117
BplI	GAGNNNNNCTC	6 cut(s)	698, 730, 883, 915, 1140, 1172
BpmI	CTGGAG	2 cut(s)	885, 910
Bpu10I	CCTNAGC	2 cut(s)	1135, 1911
BpuEI	CTTGAG	1 cut(s)	1142
BsaHI	GRCGYC	1 cut(s)	1477
BsaI	GGTCTC	4 cut(s)	952, 1513, 1735, 1986
BsaJI	CCNNGG	2 cut(s)	1407, 1517
BsaXI	ACNNNNNCTCC	4 cut(s)	949, 979, 1917, 1947
Bsc4I	CCNNNNNNNGG	6 cut(s)	524, 525, 716, 848, 888, 1645
Bse1I	ACTGG	6 cut(s)	684, 1164, 1369, 1631, 1683, 1931
Bse21I	CCTNAGG	2 cut(s)	51, 1938
BseBI	CCWGG	1 cut(s)	1481
BseDI	CCNNGG	2 cut(s)	1407, 1517
BseGI	GGATG	5 cut(s)	370, 619, 878, 1130, 1740
BseLI	CCNNNNNNNGG	6 cut(s)	524, 525, 716, 848, 888, 1645
BseMII	CTCAG	6 cut(s)	42, 729, 1149, 1925, 1952, 2020
BseNI	ACTGG	6 cut(s)	684, 1164, 1369, 1631, 1683, 1931
BseRI	GAGGAG	3 cut(s)	839, 1753, 1938
BseSI	GKGCMC	1 cut(s)	1893
BseXI	GCAGC	3 cut(s)	1127, 1302, 1575
BseYI	CCCAGC	1 cut(s)	294
Bsh1236I	CGCG	1 cut(s)	971
BshNI	GGYRCC	1 cut(s)	4
BsiHKAI	GWGCWC	2 cut(s)	837, 1893
BsiHKCI	CYCGRG	2 cut(s)	60, 1208
BsiSI	CCGG	1 cut(s)	1732
BslFI	GGGAC	3 cut(s)	102, 501, 734
BslI	CCNNNNNNNGG	6 cut(s)	524, 525, 716, 848, 888, 1645
BsmAI	GTCTC	5 cut(s)	952, 1044, 1513, 1735, 1986
BsmFI	GGGAC	3 cut(s)	102, 501, 734
BsmI	GAATGC	2 cut(s)	1495, 1711
Bso31I	GGTCTC	4 cut(s)	952, 1513, 1735, 1986
BsoBI	CYCGRG	2 cut(s)	60, 1208
Bsp1286I	GDGCHC	3 cut(s)	837, 1416, 1893
Bsp1407I	TGTACA	2 cut(s)	562, 1723
Bsp143I	GATC	8 cut(s)	71, 208, 421, 980, 1168, 1453, 1703, 1902
BspACI	CCGC	6 cut(s)	152, 1230, 1446, 1668, 1965, 2015
BspCNI	CTCAG	6 cut(s)	43, 728, 1148, 1924, 1951, 2019
BspFNI	CGCG	1 cut(s)	971
BspLI	GGNNCC	7 cut(s)	6, 57, 90, 210, 708, 1413, 1689
BspPI	GGATC	4 cut(s)	203, 216, 1448, 1910
BspT107I	GGYRCC	1 cut(s)	4
BspTNI	GGTCTC	4 cut(s)	952, 1513, 1735, 1986
BsrGI	TGTACA	2 cut(s)	562, 1723
BsrI	ACTGG	6 cut(s)	684, 1164, 1369, 1631, 1683, 1931
BssECI	CCNNGG	2 cut(s)	1407, 1517
BssMI	GATC	8 cut(s)	71, 208, 421, 980, 1168, 1453, 1703, 1902
BssNI	GRCGYC	1 cut(s)	1477
BssT1I	CCWWGG	2 cut(s)	1407, 1517
Bst2UI	CCWGG	1 cut(s)	1481
Bst6I	CTCTTC	3 cut(s)	540, 1001, 1250
BstACI	GRCGYC	1 cut(s)	1477
BstAUI	TGTACA	2 cut(s)	562, 1723
BstC8I	GCNNGC	2 cut(s)	1827, 1992
BstDEI	CTNAG	7 cut(s)	51, 715, 1135, 1184, 1911, 1938, 2006
BstEII	GGTNACC	1 cut(s)	335
BstENI	CCTNNNNNAGG	1 cut(s)	714
BstF5I	GGATG	5 cut(s)	370, 619, 878, 1130, 1740
BstFNI	CGCG	1 cut(s)	971
BstH2I	RGCGCY	2 cut(s)	889, 1732
BstHHI	GCGC	4 cut(s)	404, 888, 973, 1731
BstKTI	GATC	8 cut(s)	74, 211, 424, 983, 1171, 1456, 1706, 1905
BstMAI	GTCTC	5 cut(s)	952, 1044, 1513, 1735, 1986
BstMBI	GATC	8 cut(s)	71, 208, 421, 980, 1168, 1453, 1703, 1902
BstMWI	GCNNNNNNNGC	5 cut(s)	36, 149, 1649, 1970, 1996
BstNI	CCWGG	1 cut(s)	1481
BstNSI	RCATGY	4 cut(s)	560, 1307, 1829, 1973
BstPI	GGTNACC	1 cut(s)	335
BstSCI	CCNGG	1 cut(s)	1479
BstSLI	GKGCMC	1 cut(s)	1893
BstUI	CGCG	1 cut(s)	971
BstV1I	GCAGC	3 cut(s)	1127, 1302, 1575
BstV2I	GAAGAC	1 cut(s)	117
BstX2I	RGATCY	3 cut(s)	208, 1703, 1902
BstYI	RGATCY	3 cut(s)	208, 1703, 1902
Bsu36I	CCTNAGG	2 cut(s)	51, 1938
BsuI	GTATCC	2 cut(s)	592, 1645
BtgZI	GCGATG	1 cut(s)	1464
BtsCI	GGATG	5 cut(s)	370, 619, 878, 1130, 1740
BtsI	GCAGTG	1 cut(s)	1573
BtsIMutI	CAGTG	4 cut(s)	514, 1171, 1573, 1676
Cac8I	GCNNGC	2 cut(s)	1827, 1992
CaiI	CAGNNNCTG	1 cut(s)	513
CfoI	GCGC	4 cut(s)	404, 888, 973, 1731
Cfr13I	GGNCC	1 cut(s)	89
CseI	GACGC	1 cut(s)	1485
Csp6I	GTAC	8 cut(s)	5, 459, 563, 813, 1592, 1608, 1724, 1851
CviQI	GTAC	8 cut(s)	5, 459, 563, 813, 1592, 1608, 1724, 1851
DdeI	CTNAG	7 cut(s)	51, 715, 1135, 1184, 1911, 1938, 2006
DpnI	GATC	8 cut(s)	73, 210, 423, 982, 1170, 1455, 1705, 1904
DpnII	GATC	8 cut(s)	71, 208, 421, 980, 1168, 1453, 1703, 1902
Eam1104I	CTCTTC	3 cut(s)	540, 1001, 1250
EarI	CTCTTC	3 cut(s)	540, 1001, 1250
Eco130I	CCWWGG	2 cut(s)	1407, 1517
Eco24I	GRGCYC	1 cut(s)	1416
Eco31I	GGTCTC	4 cut(s)	952, 1513, 1735, 1986
Eco32I	GATATC	1 cut(s)	232
Eco47I	GGWCC	1 cut(s)	89
Eco47III	AGCGCT	1 cut(s)	887
Eco57I	CTGAAG	4 cut(s)	273, 370, 1304, 1343
Eco81I	CCTNAGG	2 cut(s)	51, 1938
Eco88I	CYCGRG	2 cut(s)	60, 1208
Eco91I	GGTNACC	1 cut(s)	335
EcoNI	CCTNNNNNAGG	1 cut(s)	714
EcoO109I	RGGNCCY	1 cut(s)	89
EcoO65I	GGTNACC	1 cut(s)	335
EcoRII	CCWGG	1 cut(s)	1479
EcoRV	GATATC	1 cut(s)	232
EcoT14I	CCWWGG	2 cut(s)	1407, 1517
EcoT22I	ATGCAT	2 cut(s)	130, 1827
EcoT38I	GRGCYC	1 cut(s)	1416
ErhI	CCWWGG	2 cut(s)	1407, 1517
FaqI	GGGAC	3 cut(s)	102, 501, 734
FauI	CCCGC	2 cut(s)	145, 1237
FauNDI	CATATG	1 cut(s)	1720
FbaI	TGATCA	1 cut(s)	421
Fnu4HI	GCNGC	6 cut(s)	1116, 1316, 1447, 1564, 1965, 2016
FokI	GGATG	5 cut(s)	357, 626, 865, 1117, 1747
FriOI	GRGCYC	1 cut(s)	1416
Fsp4HI	GCNGC	6 cut(s)	1116, 1316, 1447, 1564, 1965, 2016
FspBI	CTAG	7 cut(s)	69, 78, 144, 186, 578, 1605, 1961
GlaI	GCGC	4 cut(s)	403, 887, 972, 1730
GluI	GCNGC	6 cut(s)	1116, 1316, 1447, 1564, 1965, 2016
GsaI	CCCAGC	1 cut(s)	298
GsuI	CTGGAG	2 cut(s)	885, 910
HaeII	RGCGCY	2 cut(s)	889, 1732
HapII	CCGG	1 cut(s)	1732
HgaI	GACGC	1 cut(s)	1485
HhaI	GCGC	4 cut(s)	404, 888, 973, 1731
Hin1I	GRCGYC	1 cut(s)	1477
Hin6I	GCGC	4 cut(s)	402, 886, 971, 1729
HinP1I	GCGC	4 cut(s)	402, 886, 971, 1729
HincII	GTYRAC	1 cut(s)	1573
HindII	GTYRAC	1 cut(s)	1573
HindIII	AAGCTT	1 cut(s)	1385
HinfI	GANTC	4 cut(s)	121, 358, 1540, 1956
HpaII	CCGG	1 cut(s)	1732
HphI	GGTGA	3 cut(s)	329, 863, 1899
Hpy166II	GTNNAC	5 cut(s)	158, 946, 1124, 1573, 1891
Hpy188III	TCNNGA	8 cut(s)	69, 674, 902, 1082, 1148, 1208, 1512, 1940
Hpy8I	GTNNAC	5 cut(s)	158, 946, 1124, 1573, 1891
HpyCH4IV	ACGT	1 cut(s)	1040
HpyF10VI	GCNNNNNNNGC	5 cut(s)	36, 149, 1649, 1970, 1996
HpyF3I	CTNAG	7 cut(s)	51, 715, 1135, 1184, 1911, 1938, 2006
HpySE526I	ACGT	1 cut(s)	1040
Hsp92I	GRCGYC	1 cut(s)	1477
HspAI	GCGC	4 cut(s)	402, 886, 971, 1729
KpnI	GGTACC	1 cut(s)	8
Ksp22I	TGATCA	1 cut(s)	421
Kzo9I	GATC	8 cut(s)	71, 208, 421, 980, 1168, 1453, 1703, 1902
LmnI	GCTCC	4 cut(s)	706, 904, 1411, 1942
Lsp1109I	GCAGC	3 cut(s)	1127, 1302, 1575
LweI	GCATC	3 cut(s)	604, 887, 982
MaeI	CTAG	7 cut(s)	69, 78, 144, 186, 578, 1605, 1961
MaeII	ACGT	1 cut(s)	1040
MaeIII	GTNAC	5 cut(s)	335, 509, 965, 1055, 1276
MalI	GATC	8 cut(s)	73, 210, 423, 982, 1170, 1455, 1705, 1904
MboI	GATC	8 cut(s)	71, 208, 421, 980, 1168, 1453, 1703, 1902
MfeI	CAATTG	1 cut(s)	1614
MflI	RGATCY	3 cut(s)	208, 1703, 1902
MhlI	GDGCHC	3 cut(s)	837, 1416, 1893
MlyI	GAGTC	1 cut(s)	1965
MmeI	TCCRAC	1 cut(s)	829
Mph1103I	ATGCAT	2 cut(s)	130, 1827
MroXI	GAANNNNTTC	3 cut(s)	362, 490, 1932
MseI	TTAA	7 cut(s)	759, 1002, 1020, 1191, 1487, 1583, 1818
MspI	CCGG	1 cut(s)	1732
MspR9I	CCNGG	1 cut(s)	1481
MunI	CAATTG	1 cut(s)	1614
Mva1269I	GAATGC	2 cut(s)	1495, 1711
MvaI	CCWGG	1 cut(s)	1481
MvnI	CGCG	1 cut(s)	971
MwoI	GCNNNNNNNGC	5 cut(s)	36, 149, 1649, 1970, 1996
NdeI	CATATG	1 cut(s)	1720
NdeII	GATC	8 cut(s)	71, 208, 421, 980, 1168, 1453, 1703, 1902
NlaIV	GGNNCC	7 cut(s)	6, 57, 90, 210, 708, 1413, 1689
NmuCI	GTSAC	2 cut(s)	335, 509
NsiI	ATGCAT	2 cut(s)	130, 1827
NspI	RCATGY	4 cut(s)	560, 1307, 1829, 1973
PaeI	GCATGC	1 cut(s)	1829
PaeR7I	CTCGAG	1 cut(s)	60
PciI	ACATGT	1 cut(s)	1303
PctI	GAATGC	2 cut(s)	1495, 1711
PdmI	GAANNNNTTC	3 cut(s)	362, 490, 1932
PfeI	GAWTC	3 cut(s)	121, 358, 1540
PflFI	GACNNNGTC	1 cut(s)	1955
PflMI	CCANNNNNTGG	3 cut(s)	848, 888, 1645
PkrI	GCNGC	6 cut(s)	1117, 1317, 1448, 1565, 1966, 2017
PleI	GAGTC	1 cut(s)	1964
PpsI	GAGTC	1 cut(s)	1964
PpuMI	RGGWCCY	1 cut(s)	89
PscI	ACATGT	1 cut(s)	1303
Psp5II	RGGWCCY	1 cut(s)	89
Psp6I	CCWGG	1 cut(s)	1479
PspEI	GGTNACC	1 cut(s)	335
PspFI	CCCAGC	1 cut(s)	294
PspGI	CCWGG	1 cut(s)	1479
PspN4I	GGNNCC	7 cut(s)	6, 57, 90, 210, 708, 1413, 1689
PspPI	GGNCC	1 cut(s)	89
PspPPI	RGGWCCY	1 cut(s)	89
PspXI	VCTCGAGB	1 cut(s)	60
PstNI	CAGNNNCTG	1 cut(s)	513
PsuI	RGATCY	3 cut(s)	208, 1703, 1902
PsyI	GACNNNGTC	1 cut(s)	1955
RsaI	GTAC	8 cut(s)	6, 460, 564, 814, 1593, 1609, 1725, 1852
RsaNI	GTAC	8 cut(s)	5, 459, 563, 813, 1592, 1608, 1724, 1851
SaqAI	TTAA	7 cut(s)	759, 1002, 1020, 1191, 1487, 1583, 1818
SatI	GCNGC	6 cut(s)	1116, 1316, 1447, 1564, 1965, 2016
Sau3AI	GATC	8 cut(s)	71, 208, 421, 980, 1168, 1453, 1703, 1902
Sau96I	GGNCC	1 cut(s)	89
ScaI	AGTACT	2 cut(s)	1593, 1609
SchI	GAGTC	1 cut(s)	1965
ScrFI	CCNGG	1 cut(s)	1481
SduI	GDGCHC	3 cut(s)	837, 1416, 1893
SfaNI	GCATC	3 cut(s)	604, 887, 982
Sfr274I	CTCGAG	1 cut(s)	60
SinI	GGWCC	1 cut(s)	89
SlaI	CTCGAG	1 cut(s)	60
SmlI	CTYRAG	2 cut(s)	60, 1157
SmoI	CTYRAG	2 cut(s)	60, 1157
SphI	GCATGC	1 cut(s)	1829
SsiI	CCGC	6 cut(s)	152, 1230, 1446, 1668, 1965, 2015
SspMI	CTAG	7 cut(s)	69, 78, 144, 186, 578, 1605, 1961
StyD4I	CCNGG	1 cut(s)	1479
StyI	CCWWGG	2 cut(s)	1407, 1517
TaiI	ACGT	1 cut(s)	1043
TaqI	TCGA	2 cut(s)	61, 1147
TatI	WGTACW	4 cut(s)	562, 1591, 1607, 1723
TauI	GCSGC	3 cut(s)	1449, 1967, 2018
TfiI	GAWTC	3 cut(s)	121, 358, 1540
Tru1I	TTAA	7 cut(s)	759, 1002, 1020, 1191, 1487, 1583, 1818
Tru9I	TTAA	7 cut(s)	759, 1002, 1020, 1191, 1487, 1583, 1818
TscAI	CASTG	4 cut(s)	514, 1171, 1573, 1683
TseFI	GTSAC	2 cut(s)	335, 509
TseI	GCWGC	3 cut(s)	1115, 1315, 1563
Tsp45I	GTSAC	2 cut(s)	335, 509
TspDTI	ATGAA	6 cut(s)	113, 318, 674, 722, 923, 1685
TspRI	CASTG	4 cut(s)	514, 1171, 1573, 1683
Tth111I	GACNNNGTC	1 cut(s)	1955
Van91I	CCANNNNNTGG	3 cut(s)	848, 888, 1645
VneI	GTGCAC	1 cut(s)	1889
VpaK11BI	GGWCC	1 cut(s)	89
XagI	CCTNNNNNAGG	1 cut(s)	714
XapI	RAATTY	3 cut(s)	729, 787, 1224
XbaI	TCTAGA	1 cut(s)	68
XceI	RCATGY	4 cut(s)	560, 1307, 1829, 1973
XhoI	CTCGAG	1 cut(s)	60
XmnI	GAANNNNTTC	3 cut(s)	362, 490, 1932
XspI	CTAG	7 cut(s)	69, 78, 144, 186, 578, 1605, 1961
ZrmI	AGTACT	2 cut(s)	1593, 1609
Zsp2I	ATGCAT	2 cut(s)	130, 1827

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.