Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0009697

Physical Location & Seq

Genomic Coordinates Reverse (-)

11890407 .. 11893835

Gene Structure 3429 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G012100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGGTACCGCAGAGGAGGGTGGATTATGGCTTCAATGGCTACCAAGTGCCTGAGGTTCCTCGAGCTTCTAGATCAGCTAGGGGAAAGGGACCTATCAGGAAGAAACTTGAAGGCAACCAGATTCATGCGTTTGAGATTTTGGCTAGTGTAGCTGGTAAACTATTGGAGAGTGAAAAACCTCTACCTAGTAATGCTTCTAGTGGAAAGGATCCTCATTACACATTTGATGATACCATAAGGAAGCAACAGAATAAGGGAAACTCATTGAAGGAAGAACCTTGTGAGTGGGGAAGCTGTGATGAAGAAGCCTCTTTCCGTGCCTGTGGGGTGCAAGGGCAAAGTCATACTCTGAATCAGTTTTCACATCTACAAGAAAACTTTAGTTTTGAGATGAGTGGGACATCAAAAACTAATGATCACTCGGGGAAGGTTTGTTTTGCTAAAAAGTTGGGTACGGTTGACAGCAGTTCTTCTTGTGGAAGCTATTCTAACAAAGTAATCAGTGACTGTTTCTTATCTGGGGATTATATTGAAGAGGAAGACAAAGCACATGTTGTACTAAAGAGGAAACTAGAGGCTGAACCATCAAAGGATACAAGTGTAAAGGATGGAAAAGCCAATGTTTTAGTCTGTTCAGAAGATTTGCTAGAAATGGAAGGAAAGCCTCCTGAATTGGTCTGTTCTGAACATGATGTAAAGGTTCCTTTTTCAGGGGAATGCAAAATTCATGGTTCTTTCCCCTGCCATTGTGTTAAAGTAGTTAGTAGAGATGATGACGAAAATTCTGTTGGGTATGTCCAACCCTGTACCATGGTAGAGGAGTTTGAGCACACATCTGTTGGTGATAGGAAAATAAAGAATCTGTCAGCATCCAAGCACTGGAGAATAGCTCCAGATATGAAGATTGGGGATGGGAAAATAAAGCAAGTTTACCGTAATGGGAGACCTTGTTACGCACATCAAAGATCACAGAAGATTTATCCTTTTAAGAAGAGAAATTTCTTTAACCGGAGGCCATTTACTACGTCTGATAGAGGCTGTAACTGTGAAAACATATGCAGTTCACCTGACAAGAGAGAAGATGGTGGCAACTGCAACGCAGCAATTGGACGGTCATCCTCAACAACAGGTCGAGAACCTTCCAAGTCCAATGATCGTAATGTGAGGCTGAGTATTAAATCCTTCAAAGTTCCCGAACTTTTCTTTGAAATTCCTACAACTGCAACTGTTGGTTCATTGAAGAGGACAGTAATGGAGGCTGTAACTTCTATACTTGGAGAGGGATTACATGTTGGGATCCTAGTTCAGGGAAAGAAGGTCAGAGATGACAGCAAAACATTACTTCAGACTGGGATTTCGCATGATGACAAGCTTGACAATTTGGGTTTTACCTTGGAGCCCAAACATTCCAAGCTTATATATTCTCAATGCGGCAATGATCCTTCCTCTGTTTCTGGCAGAACTCAAGAGTTAACCAGGCATTCTGCATCTTTGGTCTCACGACCAGGGACTTCAAATGTCTCCCTGAATCCTCCAGCAACCAATTTGGGTAGCTGTGTTGACAAAGGCTTGAATGCAGTGCCCTCTCTTGCTAGTACTTCAATTGACAAAACCCCACCAGCATCCCAAGCTCTGGTTGCAGTTCCACCAATTAACGCAAAGCCACTGGCTGTGGTTCCTTTTCATAGGAGATCTGGGCATCCAGCATATGTACAGCGCCGGATGAGGAGACCTTTCTCTGTTTCAGAAGTAGAAGCATTGGTTCAGGCTGTTGAGAAACTTGGAACAGGAAGGTGGCGTGATGTTAAAATGCGTGCTTTTGATAATGCAAAACATCGAACTTATGTGGATTTGAAGGACAAGTGGAAAACATTGGTGCACACAGCAAGGATCTCACCTCAGCAAAGGAGAGGAGAACCTGTTCCTCAGGAACTTTTGGACAGAGTCCTAGCCGCCCATGCCTACTGGTCTCAGCGGCAAGCCAAGCAGCAGCTCAGAGCAGCAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000723 GO:0000781 GO:0000782 GO:0000783 GO:0000784 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003691 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0031627 GO:0031974 GO:0031981 GO:0032200 GO:0032991 GO:0032993 GO:0034641 GO:0042162 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0051276 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098687 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

669

Amino Acids

74.02

Weight (kDa)

9.17

Isoelectric Point (pI)

44.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ubiquitin_TPR1	PF23603	387 - 455	6.7e-38	Telomere repeat-binding protein 1-like, ubiquitin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009697)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g13540 FvH4_6g13540
malus_domestica	MD04G1130300.v1.1 MD12G1143400.v1.1
prunus_persica	Prupe.6G256900_v2.0.a1 Prupe.6G256900_v2.0.a1 Prupe.6G256900_v2.0.a1 Prupe.6G256900_v2.0.a1
pyrus_communis	pycom12g13810
rosa_chinensis	RchiOBHm_Chr3g0466401
rosa_laevigata	RLG00000024577
rosa_multiflora	Rmu_sc0001716.1_g000002 Rmu_sc0003332.1_g000029 Rmu_sc0003480.1_g000002
rosa_roxburghii	Rroxscaffold_6G00414500
rosa_rugosa	Rorug03G0081500 Rorug03G0081600 Rorug03G0081700
rosa_samantha	Rh3AG128100 Rh3BG149400 Rh3DG150100
rosa_wichuraiana	Rw3G012100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	4
AccB1I	GGYRCC	1 cut(s)	4
AccB7I	CCANNNNNTGG	2 cut(s)	879, 1633
AciI	CCGC	4 cut(s)	8, 1431, 1953, 1975
AclWI	GGATC	6 cut(s)	203, 216, 1291, 1304, 1433, 1898
AcsI	RAATTY	4 cut(s)	723, 781, 997, 1209
AcuI	CTGAAG	1 cut(s)	1328
AfaI	GTAC	6 cut(s)	6, 454, 558, 808, 1597, 1713
AfiI	CCNNNNNNNGG	4 cut(s)	710, 879, 1306, 1633
AflIII	ACRYGT	2 cut(s)	550, 1288
AjnI	CCWGG	2 cut(s)	1475, 1504
AjuI	GAANNNNNNNTTGG	2 cut(s)	771, 803
AloI	GAACNNNNNNTCC	2 cut(s)	1905, 1937
Alw21I	GWGCWC	2 cut(s)	831, 1881
Alw26I	GTCTC	5 cut(s)	937, 1501, 1525, 1723, 1974
Alw44I	GTGCAC	1 cut(s)	1877
AlwI	GGATC	6 cut(s)	203, 216, 1291, 1304, 1433, 1898
AlwNI	CAGNNNCTG	1 cut(s)	507
Ama87I	CYCGRG	2 cut(s)	60, 421
AoxI	GGCC	1 cut(s)	1013
ApaLI	GTGCAC	1 cut(s)	1877
ApeKI	GCWGC	5 cut(s)	1100, 1987, 1990, 2000, 2003
ApoI	RAATTY	4 cut(s)	723, 781, 997, 1209
ArsI	GACNNNNNNTTYG	2 cut(s)	1339, 1371
Asp700I	GAANNNNTTC	2 cut(s)	484, 1920
Asp718I	GGTACC	1 cut(s)	4
AspLEI	GCGC	1 cut(s)	1719
AspS9I	GGNCC	1 cut(s)	89
AsuHPI	GGTGA	3 cut(s)	854, 1056, 1887
AvaI	CYCGRG	2 cut(s)	60, 421
AvaII	GGWCC	1 cut(s)	89
AxyI	CCTNAGG	2 cut(s)	51, 1926
BaeGI	GKGCMC	2 cut(s)	1584, 1881
BaeI	ACNNNNGTAYC	2 cut(s)	585, 618
BamHI	GGATCC	2 cut(s)	208, 1296
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	1 cut(s)	1401
BbsI	GAAGAC	1 cut(s)	546
Bbv12I	GWGCWC	2 cut(s)	831, 1881
BbvCI	CCTCAGC	1 cut(s)	1899
BbvI	GCAGC	3 cut(s)	1112, 1999, 2002
BccI	CCATC	4 cut(s)	592, 602, 905, 1076
BciT130I	CCWGG	2 cut(s)	1477, 1506
BciVI	GTATCC	1 cut(s)	586
BclI	TGATCA	1 cut(s)	415
BcoDI	GTCTC	5 cut(s)	937, 1501, 1525, 1723, 1974
BfoI	RGCGCY	1 cut(s)	1720
BfuI	GTATCC	1 cut(s)	586
BglII	AGATCT	1 cut(s)	1691
BisI	GCNGC	8 cut(s)	1101, 1432, 1953, 1976, 1988, 1991, 2001, 2004
BlsI	GCNGC	8 cut(s)	1102, 1433, 1954, 1977, 1989, 1992, 2002, 2005
BmcAI	AGTACT	1 cut(s)	1597
Bme1390I	CCNGG	2 cut(s)	1477, 1506
Bme18I	GGWCC	1 cut(s)	89
BmeT110I	CYCGRG	2 cut(s)	60, 421
BmgT120I	GGNCC	1 cut(s)	89
BmiI	GGNNCC	8 cut(s)	6, 57, 90, 210, 702, 1298, 1398, 1677
BmrFI	CCNGG	2 cut(s)	1477, 1506
BmrI	ACTGGG	1 cut(s)	1359
BmsI	GCATC	4 cut(s)	878, 1496, 1631, 1708
BmuI	ACTGGG	1 cut(s)	1359
BpiI	GAAGAC	1 cut(s)	546
BplI	GAGNNNNNCTC	2 cut(s)	874, 906
BpmI	CTGGAG	3 cut(s)	876, 901, 1518
Bpu10I	CCTNAGC	1 cut(s)	1899
BpuEI	CTTGAG	1 cut(s)	1449
BsaI	GGTCTC	4 cut(s)	937, 1501, 1723, 1974
BsaJI	CCNNGG	3 cut(s)	810, 1392, 1505
BsaWI	WCCGGW	1 cut(s)	1008
BsaXI	ACNNNNNCTCC	4 cut(s)	934, 964, 1905, 1935
Bsc4I	CCNNNNNNNGG	4 cut(s)	710, 879, 1306, 1633
Bse1I	ACTGG	4 cut(s)	884, 1354, 1671, 1970
Bse21I	CCTNAGG	2 cut(s)	51, 1926
Bse3DI	GCAATG	1 cut(s)	1441
BseBI	CCWGG	2 cut(s)	1477, 1506
BseDI	CCNNGG	3 cut(s)	810, 1392, 1505
BseGI	GGATG	7 cut(s)	613, 869, 916, 1115, 1622, 1699, 1728
BseLI	CCNNNNNNNGG	4 cut(s)	710, 879, 1306, 1633
BseMI	GCAATG	1 cut(s)	1441
BseMII	CTCAG	6 cut(s)	42, 1160, 1913, 1940, 1985, 2008
BseNI	ACTGG	4 cut(s)	884, 1354, 1671, 1970
BseRI	GAGGAG	4 cut(s)	28, 833, 1741, 1926
BseSI	GKGCMC	2 cut(s)	1584, 1881
BseXI	GCAGC	3 cut(s)	1112, 1999, 2002
BshFI	GGCC	1 cut(s)	1015
BshNI	GGYRCC	1 cut(s)	4
BsiHKAI	GWGCWC	2 cut(s)	831, 1881
BsiHKCI	CYCGRG	2 cut(s)	60, 421
BsiSI	CCGG	2 cut(s)	1009, 1720
BslFI	GGGAC	3 cut(s)	102, 412, 1522
BslI	CCNNNNNNNGG	4 cut(s)	710, 879, 1306, 1633
BsmAI	GTCTC	5 cut(s)	937, 1501, 1525, 1723, 1974
BsmFI	GGGAC	3 cut(s)	102, 412, 1522
BsmI	GAATGC	3 cut(s)	722, 1480, 1579
BsnI	GGCC	1 cut(s)	1015
Bso31I	GGTCTC	4 cut(s)	937, 1501, 1723, 1974
BsoBI	CYCGRG	2 cut(s)	60, 421
Bsp1286I	GDGCHC	4 cut(s)	831, 1401, 1584, 1881
Bsp1407I	TGTACA	1 cut(s)	1711
Bsp143I	GATC	9 cut(s)	71, 208, 415, 965, 1153, 1296, 1438, 1691, 1890
Bsp19I	CCATGG	1 cut(s)	810
BspACI	CCGC	4 cut(s)	8, 1431, 1953, 1975
BspANI	GGCC	1 cut(s)	1015
BspCNI	CTCAG	6 cut(s)	43, 1161, 1912, 1939, 1984, 2007
BspLI	GGNNCC	8 cut(s)	6, 57, 90, 210, 702, 1298, 1398, 1677
BspPI	GGATC	6 cut(s)	203, 216, 1291, 1304, 1433, 1898
BspT107I	GGYRCC	1 cut(s)	4
BspTNI	GGTCTC	4 cut(s)	937, 1501, 1723, 1974
BsrDI	GCAATG	1 cut(s)	1441
BsrGI	TGTACA	1 cut(s)	1711
BsrI	ACTGG	4 cut(s)	884, 1354, 1671, 1970
BssECI	CCNNGG	3 cut(s)	810, 1392, 1505
BssMI	GATC	9 cut(s)	71, 208, 415, 965, 1153, 1296, 1438, 1691, 1890
BssT1I	CCWWGG	2 cut(s)	810, 1392
Bst2UI	CCWGG	2 cut(s)	1477, 1506
Bst4CI	ACNGT	7 cut(s)	457, 509, 935, 1046, 1113, 1228, 1249
Bst6I	CTCTTC	3 cut(s)	528, 986, 1235
BstAUI	TGTACA	1 cut(s)	1711
BstC8I	GCNNGC	2 cut(s)	1815, 1980
BstDEI	CTNAG	6 cut(s)	51, 1169, 1899, 1926, 1971, 1994
BstDSI	CCRYGG	1 cut(s)	810
BstENI	CCTNNNNNAGG	2 cut(s)	708, 1304
BstF5I	GGATG	7 cut(s)	613, 869, 916, 1115, 1622, 1699, 1728
BstH2I	RGCGCY	1 cut(s)	1720
BstHHI	GCGC	1 cut(s)	1719
BstKTI	GATC	9 cut(s)	74, 211, 418, 968, 1156, 1299, 1441, 1694, 1893
BstMAI	GTCTC	5 cut(s)	937, 1501, 1525, 1723, 1974
BstMBI	GATC	9 cut(s)	71, 208, 415, 965, 1153, 1296, 1438, 1691, 1890
BstMWI	GCNNNNNNNGC	6 cut(s)	36, 149, 1628, 1637, 1958, 1984
BstNI	CCWGG	2 cut(s)	1477, 1506
BstNSI	RCATGY	2 cut(s)	554, 1292
BstSCI	CCNGG	2 cut(s)	1475, 1504
BstSLI	GKGCMC	2 cut(s)	1584, 1881
BstV1I	GCAGC	3 cut(s)	1112, 1999, 2002
BstV2I	GAAGAC	1 cut(s)	546
BstX2I	RGATCY	4 cut(s)	208, 1296, 1691, 1890
BstYI	RGATCY	4 cut(s)	208, 1296, 1691, 1890
Bsu36I	CCTNAGG	2 cut(s)	51, 1926
BsuI	GTATCC	1 cut(s)	586
BsuRI	GGCC	1 cut(s)	1015
BtgI	CCRYGG	1 cut(s)	810
BtsCI	GGATG	7 cut(s)	613, 869, 916, 1115, 1622, 1699, 1728
BtsI	GCAGTG	1 cut(s)	1584
BtsIMutI	CAGTG	4 cut(s)	508, 877, 1584, 1664
Cac8I	GCNNGC	2 cut(s)	1815, 1980
CaiI	CAGNNNCTG	1 cut(s)	507
CfoI	GCGC	1 cut(s)	1719
Cfr13I	GGNCC	1 cut(s)	89
Csp6I	GTAC	6 cut(s)	5, 453, 557, 807, 1596, 1712
CviAII	CATG	8 cut(s)	125, 551, 689, 728, 811, 1289, 1361, 1958
CviQI	GTAC	6 cut(s)	5, 453, 557, 807, 1596, 1712
DdeI	CTNAG	6 cut(s)	51, 1169, 1899, 1926, 1971, 1994
DpnI	GATC	9 cut(s)	73, 210, 417, 967, 1155, 1298, 1440, 1693, 1892
DpnII	GATC	9 cut(s)	71, 208, 415, 965, 1153, 1296, 1438, 1691, 1890
Eam1104I	CTCTTC	3 cut(s)	528, 986, 1235
EarI	CTCTTC	3 cut(s)	528, 986, 1235
Eco130I	CCWWGG	2 cut(s)	810, 1392
Eco24I	GRGCYC	1 cut(s)	1401
Eco31I	GGTCTC	4 cut(s)	937, 1501, 1723, 1974
Eco47I	GGWCC	1 cut(s)	89
Eco57I	CTGAAG	1 cut(s)	1328
Eco81I	CCTNAGG	2 cut(s)	51, 1926
Eco88I	CYCGRG	2 cut(s)	60, 421
EcoNI	CCTNNNNNAGG	2 cut(s)	708, 1304
EcoO109I	RGGNCCY	1 cut(s)	89
EcoRII	CCWGG	2 cut(s)	1475, 1504
EcoT14I	CCWWGG	2 cut(s)	810, 1392
EcoT38I	GRGCYC	1 cut(s)	1401
ErhI	CCWWGG	2 cut(s)	810, 1392
FaeI	CATG	8 cut(s)	128, 554, 692, 731, 814, 1292, 1364, 1961
FaqI	GGGAC	3 cut(s)	102, 412, 1522
FatI	CATG	8 cut(s)	124, 550, 688, 727, 810, 1288, 1360, 1957
FauNDI	CATATG	2 cut(s)	1055, 1708
FbaI	TGATCA	1 cut(s)	415
Fnu4HI	GCNGC	8 cut(s)	1101, 1432, 1953, 1976, 1988, 1991, 2001, 2004
FokI	GGATG	7 cut(s)	620, 856, 923, 1102, 1609, 1686, 1735
FriOI	GRGCYC	1 cut(s)	1401
Fsp4HI	GCNGC	8 cut(s)	1101, 1432, 1953, 1976, 1988, 1991, 2001, 2004
GlaI	GCGC	1 cut(s)	1718
GluI	GCNGC	8 cut(s)	1101, 1432, 1953, 1976, 1988, 1991, 2001, 2004
GsuI	CTGGAG	3 cut(s)	876, 901, 1518
HaeII	RGCGCY	1 cut(s)	1720
HaeIII	GGCC	1 cut(s)	1015
HapII	CCGG	2 cut(s)	1009, 1720
HhaI	GCGC	1 cut(s)	1719
Hin1II	CATG	8 cut(s)	128, 554, 692, 731, 814, 1292, 1364, 1961
Hin6I	GCGC	1 cut(s)	1717
HinP1I	GCGC	1 cut(s)	1717
HincII	GTYRAC	3 cut(s)	460, 1473, 1561
HindII	GTYRAC	3 cut(s)	460, 1473, 1561
HindIII	AAGCTT	2 cut(s)	1370, 1412
HinfI	GANTC	5 cut(s)	121, 352, 859, 1528, 1944
HpaI	GTTAAC	1 cut(s)	1473
HpaII	CCGG	2 cut(s)	1009, 1720
HphI	GGTGA	3 cut(s)	854, 1056, 1887
Hpy166II	GTNNAC	7 cut(s)	158, 460, 931, 1064, 1473, 1561, 1879
Hpy188I	TCNGA	8 cut(s)	351, 637, 685, 1030, 1322, 1347, 1747, 1997
Hpy188III	TCNNGA	9 cut(s)	69, 97, 668, 893, 1133, 1193, 1466, 1500, 1928
Hpy8I	GTNNAC	7 cut(s)	158, 460, 931, 1064, 1473, 1561, 1879
HpyCH4III	ACNGT	7 cut(s)	457, 509, 935, 1046, 1113, 1228, 1249
HpyCH4IV	ACGT	1 cut(s)	1025
HpyF10VI	GCNNNNNNNGC	6 cut(s)	36, 149, 1628, 1637, 1958, 1984
HpyF3I	CTNAG	6 cut(s)	51, 1169, 1899, 1926, 1971, 1994
HpySE526I	ACGT	1 cut(s)	1025
Hsp92II	CATG	8 cut(s)	128, 554, 692, 731, 814, 1292, 1364, 1961
HspAI	GCGC	1 cut(s)	1717
KpnI	GGTACC	1 cut(s)	8
Ksp22I	TGATCA	1 cut(s)	415
KspAI	GTTAAC	1 cut(s)	1473
Kzo9I	GATC	9 cut(s)	71, 208, 415, 965, 1153, 1296, 1438, 1691, 1890
LmnI	GCTCC	2 cut(s)	895, 1396
Lsp1109I	GCAGC	3 cut(s)	1112, 1999, 2002
LweI	GCATC	4 cut(s)	878, 1496, 1631, 1708
MaeII	ACGT	1 cut(s)	1025
MaeIII	GTNAC	4 cut(s)	503, 950, 1040, 1261
MalI	GATC	9 cut(s)	73, 210, 417, 967, 1155, 1298, 1440, 1693, 1892
MboI	GATC	9 cut(s)	71, 208, 415, 965, 1153, 1296, 1438, 1691, 1890
MfeI	CAATTG	2 cut(s)	1104, 1602
MflI	RGATCY	4 cut(s)	208, 1296, 1691, 1890
MhlI	GDGCHC	4 cut(s)	831, 1401, 1584, 1881
MlyI	GAGTC	1 cut(s)	1953
MmeI	TCCRAC	1 cut(s)	823
MroXI	GAANNNNTTC	2 cut(s)	484, 1920
MseI	TTAA	7 cut(s)	753, 987, 1005, 1176, 1472, 1653, 1806
MspA1I	CMGCKG	1 cut(s)	1975
MspI	CCGG	2 cut(s)	1009, 1720
MspR9I	CCNGG	2 cut(s)	1477, 1506
MunI	CAATTG	2 cut(s)	1104, 1602
Mva1269I	GAATGC	3 cut(s)	722, 1480, 1579
MvaI	CCWGG	2 cut(s)	1477, 1506
MwoI	GCNNNNNNNGC	6 cut(s)	36, 149, 1628, 1637, 1958, 1984
NcoI	CCATGG	1 cut(s)	810
NdeI	CATATG	2 cut(s)	1055, 1708
NdeII	GATC	9 cut(s)	71, 208, 415, 965, 1153, 1296, 1438, 1691, 1890
NlaIII	CATG	8 cut(s)	128, 554, 692, 731, 814, 1292, 1364, 1961
NlaIV	GGNNCC	8 cut(s)	6, 57, 90, 210, 702, 1298, 1398, 1677
NmuCI	GTSAC	1 cut(s)	503
NspI	RCATGY	2 cut(s)	554, 1292
PaeR7I	CTCGAG	1 cut(s)	60
PciI	ACATGT	2 cut(s)	550, 1288
PctI	GAATGC	3 cut(s)	722, 1480, 1579
PdmI	GAANNNNTTC	2 cut(s)	484, 1920
PfeI	GAWTC	4 cut(s)	121, 352, 859, 1528
PflFI	GACNNNGTC	1 cut(s)	1943
PflMI	CCANNNNNTGG	2 cut(s)	879, 1633
PkrI	GCNGC	8 cut(s)	1102, 1433, 1954, 1977, 1989, 1992, 2002, 2005
PleI	GAGTC	1 cut(s)	1952
PpsI	GAGTC	1 cut(s)	1952
PpuMI	RGGWCCY	1 cut(s)	89
PscI	ACATGT	2 cut(s)	550, 1288
Psp5II	RGGWCCY	1 cut(s)	89
Psp6I	CCWGG	2 cut(s)	1475, 1504
PspGI	CCWGG	2 cut(s)	1475, 1504
PspN4I	GGNNCC	8 cut(s)	6, 57, 90, 210, 702, 1298, 1398, 1677
PspPI	GGNCC	1 cut(s)	89
PspPPI	RGGWCCY	1 cut(s)	89
PspXI	VCTCGAGB	1 cut(s)	60
PstNI	CAGNNNCTG	1 cut(s)	507
PsuI	RGATCY	4 cut(s)	208, 1296, 1691, 1890
PsyI	GACNNNGTC	1 cut(s)	1943
RsaI	GTAC	6 cut(s)	6, 454, 558, 808, 1597, 1713
RsaNI	GTAC	6 cut(s)	5, 453, 557, 807, 1596, 1712
SaqAI	TTAA	7 cut(s)	753, 987, 1005, 1176, 1472, 1653, 1806
SatI	GCNGC	8 cut(s)	1101, 1432, 1953, 1976, 1988, 1991, 2001, 2004
Sau3AI	GATC	9 cut(s)	71, 208, 415, 965, 1153, 1296, 1438, 1691, 1890
Sau96I	GGNCC	1 cut(s)	89
ScaI	AGTACT	1 cut(s)	1597
SchI	GAGTC	1 cut(s)	1953
ScrFI	CCNGG	2 cut(s)	1477, 1506
SduI	GDGCHC	4 cut(s)	831, 1401, 1584, 1881
SfaNI	GCATC	4 cut(s)	878, 1496, 1631, 1708
Sfr274I	CTCGAG	1 cut(s)	60
SinI	GGWCC	1 cut(s)	89
SlaI	CTCGAG	1 cut(s)	60
SmlI	CTYRAG	2 cut(s)	60, 1464
SmoI	CTYRAG	2 cut(s)	60, 1464
SsiI	CCGC	4 cut(s)	8, 1431, 1953, 1975
StyD4I	CCNGG	2 cut(s)	1475, 1504
StyI	CCWWGG	2 cut(s)	810, 1392
TaaI	ACNGT	7 cut(s)	457, 509, 935, 1046, 1113, 1228, 1249
TaiI	ACGT	1 cut(s)	1028
TaqI	TCGA	3 cut(s)	61, 1132, 1837
TatI	WGTACW	3 cut(s)	556, 1595, 1711
TauI	GCSGC	3 cut(s)	1434, 1955, 1978
TfiI	GAWTC	4 cut(s)	121, 352, 859, 1528
Tru1I	TTAA	7 cut(s)	753, 987, 1005, 1176, 1472, 1653, 1806
Tru9I	TTAA	7 cut(s)	753, 987, 1005, 1176, 1472, 1653, 1806
TscAI	CASTG	4 cut(s)	508, 884, 1584, 1671
TseFI	GTSAC	1 cut(s)	503
TseI	GCWGC	5 cut(s)	1100, 1987, 1990, 2000, 2003
Tsp45I	GTSAC	1 cut(s)	503
TspDTI	ATGAA	6 cut(s)	113, 315, 716, 914, 1224, 1673
TspGWI	ACGGA	1 cut(s)	305
TspRI	CASTG	4 cut(s)	508, 884, 1584, 1671
Tth111I	GACNNNGTC	1 cut(s)	1943
Van91I	CCANNNNNTGG	2 cut(s)	879, 1633
VneI	GTGCAC	1 cut(s)	1877
VpaK11BI	GGWCC	1 cut(s)	89
XagI	CCTNNNNNAGG	2 cut(s)	708, 1304
XapI	RAATTY	4 cut(s)	723, 781, 997, 1209
XbaI	TCTAGA	1 cut(s)	68
XceI	RCATGY	2 cut(s)	554, 1292
XhoI	CTCGAG	1 cut(s)	60
XmnI	GAANNNNTTC	2 cut(s)	484, 1920
ZrmI	AGTACT	1 cut(s)	1597

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.