Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0009697

Physical Location & Seq

Genomic Coordinates Reverse (-)

12656071 .. 12661007

Gene Structure 4937 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG149400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

ATGGTACCGCAGAGGAGGGTGGATTATGGCTTCAATGGCTACCAAGTGCCTGAGGTTCCTCGAGCTTCTAGATCAGCTAGGGGAAAGGGACCTATCAGGAAGAAACTTGAAGGCAACCAGATTCATGCGTTTGAGATTTTGGCTAGTGTAGCTGGTAAACTATTGGAGAGTGAAAAACCTCTACCTAGTAATGCTTCTAGTGGAAAGGATCCTCATTACACATTTGATGATACCATAAGGAAGCAACAGAATAAAGGAAACTCATTGAAGGAAGAACCTTGTGAGTGGGGAAGCTGTGATGAAGAAGCCTCTTTCCGTGCCTGTGGGGTGCAAGGGCAAAGTCATACTCTGAATCAGTTTTCACATCTACAAGAAAACTTTAGTTTTGAGATGAGTGGGACATCAAAAACTAATGTTCACTCGGGGAAGGTTTGTTTTGCTAAAAAGTTGGGTACGGTTGACAGCAGTTCTTCTTGTGGAAGCTATTCTAACAAAGTAATCAGTGACTGTTTCTTATCTGGGGATTATATTGAAGAGGAAGACAAAGCACATGTTGTACTAAAGAGGAAACTAGAGGCTGAACCATCAAAGGATACAAGTGTAAAGGATGGAAAAGCCAATGTTTTAGTCTGTTCAGAAGATTTGCTAGAAATGGAAGGAAAGCCTCCTGAATTGGTCTGTTCTGAACATGATGTAAAGGTTCCTTTTTCAGGGGAATGCAAAATTCATGGTTCTTTCCCCTGCCATTGTGTTAAAGTAGTTAGTAGAGATGATGACGAAAATTCTGTTGGGTATGTCCAACCCTGTACCATGGTAGAGGAGTTTGAGCACACATCTGTTGGTGATAGGAAAATAAAGAATCTGTCAGCATCCAAGCACTGGAGAATAGCTCCAGATATGAAGATTGGGGGTTATCATAGAACTGATGGGAAAATAAAGCAAGTTTACCGTAATGGGAGACCTTGTTACGCACATCAAAGATCACAGAAGATTTATCCTTTTAAGAAGAGAAATTTCTTTAACCGGAGGCCATTTACTACGTCTGATAGAGGCTGTAACTGTGAAAACATATGCAGTTCACCTGACAAGAGAGAAGATGGTGGCAACTGCAACGCAGCAATTGGACGGTCATCCTCAACAACAGGTCGAGAACCTTCCAAGTCCAATGATCGTAATGTGAGGCTGAGTATTAAATCCTTCAAAGTTCCCGAACTTTTCTTTGAAATTCCTACAACTGCAACTGTTGGTTCATTGAAGAGGACAGTAATGGAGGCTGTAACTTCTATACTTGGAGAGGGATTACATGTTGGGATCCTAGTTCAGGGAAAGAAGGTCAGAGATGACAGCAAAACATTACTTCAGACTGGGATTTCGCATGATGACAAGCTTGACAATTTGGGTTTTACCTTGGAGCCCAAACATTCCAAGCTTATATATTCTCAATGCGGCAATGATCCTTCCTCTGTTTCTGGCAGAACTCAAGAGTTAACCAGGCATTCTGCATCTTTGGTCTCACGACCAGGGACTTCAAATGTCTCCCTGAATCCTCCAGCAACCAATTTGGGTAGCTGTGTTGACAAAGGCTTGAATGCAGTGCCCTCTTTTGCTAGTACTTCAATTGACAAAACCCCACCAGCATCCCAAGCTCTGGTTGCAGTTCCACCAATTAACGCAAAGCCACTGGCTGTGGTTCCTTTTCATAGGAGATCTGGGCATCCAGCATATGTACAGCGCCGGATGAGGAGACCTTTCTCTGTTTCAGAAGTAGAAGCATTAGTTCAGGCTGTTGAGAAACTTGGAACAGGAAGGTTGGTTTGCTTATTGTCCTTTTTGCTAGGGTTGATGAATATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000723 GO:0000781 GO:0000782 GO:0000783 GO:0000784 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003691 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0031627 GO:0031974 GO:0031981 GO:0032200 GO:0032991 GO:0032993 GO:0034641 GO:0042162 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0051276 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098687 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

617

Amino Acids

67.76

Weight (kDa)

8.93

Isoelectric Point (pI)

42.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ubiquitin_TPR1	PF23603	392 - 460	6e-38	Telomere repeat-binding protein 1-like, ubiquitin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009697)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g13540 FvH4_6g13540
malus_domestica	MD04G1130300.v1.1 MD12G1143400.v1.1
prunus_persica	Prupe.6G256900_v2.0.a1 Prupe.6G256900_v2.0.a1 Prupe.6G256900_v2.0.a1 Prupe.6G256900_v2.0.a1
pyrus_communis	pycom12g13810
rosa_chinensis	RchiOBHm_Chr3g0466401
rosa_laevigata	RLG00000024577
rosa_multiflora	Rmu_sc0001716.1_g000002 Rmu_sc0003332.1_g000029 Rmu_sc0003480.1_g000002
rosa_roxburghii	Rroxscaffold_6G00414500
rosa_rugosa	Rorug03G0081500 Rorug03G0081600 Rorug03G0081700
rosa_samantha	Rh3AG128100 Rh3BG149400 Rh3DG150100
rosa_wichuraiana	Rw3G012100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	4
AccB1I	GGYRCC	1 cut(s)	4
AccB7I	CCANNNNNTGG	2 cut(s)	879, 1648
AciI	CCGC	2 cut(s)	8, 1446
AclWI	GGATC	5 cut(s)	203, 216, 1306, 1319, 1448
AcsI	RAATTY	4 cut(s)	723, 781, 1012, 1224
AcuI	CTGAAG	1 cut(s)	1343
AfaI	GTAC	6 cut(s)	6, 454, 558, 808, 1612, 1728
AfiI	CCNNNNNNNGG	4 cut(s)	710, 879, 1321, 1648
AflIII	ACRYGT	2 cut(s)	550, 1303
AjnI	CCWGG	2 cut(s)	1490, 1519
AjuI	GAANNNNNNNTTGG	2 cut(s)	771, 803
Alw21I	GWGCWC	1 cut(s)	831
Alw26I	GTCTC	4 cut(s)	952, 1516, 1540, 1738
AlwI	GGATC	5 cut(s)	203, 216, 1306, 1319, 1448
AlwNI	CAGNNNCTG	1 cut(s)	507
Ama87I	CYCGRG	2 cut(s)	60, 421
AoxI	GGCC	1 cut(s)	1028
ApeKI	GCWGC	1 cut(s)	1115
ApoI	RAATTY	4 cut(s)	723, 781, 1012, 1224
ArsI	GACNNNNNNTTYG	2 cut(s)	1354, 1386
Asp700I	GAANNNNTTC	1 cut(s)	484
Asp718I	GGTACC	1 cut(s)	4
AspLEI	GCGC	1 cut(s)	1734
AspS9I	GGNCC	1 cut(s)	89
AsuHPI	GGTGA	2 cut(s)	854, 1071
AvaI	CYCGRG	2 cut(s)	60, 421
AvaII	GGWCC	1 cut(s)	89
AxyI	CCTNAGG	1 cut(s)	51
BaeGI	GKGCMC	1 cut(s)	1599
BaeI	ACNNNNGTAYC	2 cut(s)	585, 618
BamHI	GGATCC	2 cut(s)	208, 1311
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	1 cut(s)	1416
BbsI	GAAGAC	1 cut(s)	546
Bbv12I	GWGCWC	1 cut(s)	831
BbvI	GCAGC	1 cut(s)	1127
BccI	CCATC	4 cut(s)	592, 602, 920, 1091
BciT130I	CCWGG	2 cut(s)	1492, 1521
BciVI	GTATCC	1 cut(s)	586
BcoDI	GTCTC	4 cut(s)	952, 1516, 1540, 1738
BfoI	RGCGCY	1 cut(s)	1735
BfuI	GTATCC	1 cut(s)	586
BglII	AGATCT	1 cut(s)	1706
BisI	GCNGC	2 cut(s)	1116, 1447
BlsI	GCNGC	2 cut(s)	1117, 1448
BmcAI	AGTACT	1 cut(s)	1612
Bme1390I	CCNGG	2 cut(s)	1492, 1521
Bme18I	GGWCC	1 cut(s)	89
BmeT110I	CYCGRG	2 cut(s)	60, 421
BmgT120I	GGNCC	1 cut(s)	89
BmiI	GGNNCC	8 cut(s)	6, 57, 90, 210, 702, 1313, 1413, 1692
BmrFI	CCNGG	2 cut(s)	1492, 1521
BmrI	ACTGGG	1 cut(s)	1374
BmsI	GCATC	4 cut(s)	878, 1511, 1646, 1723
BmuI	ACTGGG	1 cut(s)	1374
BpiI	GAAGAC	1 cut(s)	546
BplI	GAGNNNNNCTC	2 cut(s)	874, 906
BpmI	CTGGAG	3 cut(s)	876, 901, 1533
BpuEI	CTTGAG	1 cut(s)	1464
BsaI	GGTCTC	3 cut(s)	952, 1516, 1738
BsaJI	CCNNGG	3 cut(s)	810, 1407, 1520
BsaWI	WCCGGW	1 cut(s)	1023
BsaXI	ACNNNNNCTCC	2 cut(s)	949, 979
Bsc4I	CCNNNNNNNGG	4 cut(s)	710, 879, 1321, 1648
Bse1I	ACTGG	3 cut(s)	884, 1369, 1686
Bse21I	CCTNAGG	1 cut(s)	51
Bse3DI	GCAATG	1 cut(s)	1456
BseBI	CCWGG	2 cut(s)	1492, 1521
BseDI	CCNNGG	3 cut(s)	810, 1407, 1520
BseGI	GGATG	6 cut(s)	613, 869, 1130, 1637, 1714, 1743
BseLI	CCNNNNNNNGG	4 cut(s)	710, 879, 1321, 1648
BseMI	GCAATG	1 cut(s)	1456
BseMII	CTCAG	2 cut(s)	42, 1175
BseNI	ACTGG	3 cut(s)	884, 1369, 1686
BseRI	GAGGAG	3 cut(s)	28, 833, 1756
BseSI	GKGCMC	1 cut(s)	1599
BseXI	GCAGC	1 cut(s)	1127
BshFI	GGCC	1 cut(s)	1030
BshNI	GGYRCC	1 cut(s)	4
BsiHKAI	GWGCWC	1 cut(s)	831
BsiHKCI	CYCGRG	2 cut(s)	60, 421
BsiSI	CCGG	2 cut(s)	1024, 1735
BslFI	GGGAC	3 cut(s)	102, 412, 1537
BslI	CCNNNNNNNGG	4 cut(s)	710, 879, 1321, 1648
BsmAI	GTCTC	4 cut(s)	952, 1516, 1540, 1738
BsmFI	GGGAC	3 cut(s)	102, 412, 1537
BsmI	GAATGC	3 cut(s)	722, 1495, 1594
BsnI	GGCC	1 cut(s)	1030
Bso31I	GGTCTC	3 cut(s)	952, 1516, 1738
BsoBI	CYCGRG	2 cut(s)	60, 421
Bsp1286I	GDGCHC	3 cut(s)	831, 1416, 1599
Bsp1407I	TGTACA	1 cut(s)	1726
Bsp143I	GATC	7 cut(s)	71, 208, 980, 1168, 1311, 1453, 1706
Bsp19I	CCATGG	1 cut(s)	810
BspACI	CCGC	2 cut(s)	8, 1446
BspANI	GGCC	1 cut(s)	1030
BspCNI	CTCAG	2 cut(s)	43, 1176
BspLI	GGNNCC	8 cut(s)	6, 57, 90, 210, 702, 1313, 1413, 1692
BspPI	GGATC	5 cut(s)	203, 216, 1306, 1319, 1448
BspT107I	GGYRCC	1 cut(s)	4
BspTNI	GGTCTC	3 cut(s)	952, 1516, 1738
BsrDI	GCAATG	1 cut(s)	1456
BsrGI	TGTACA	1 cut(s)	1726
BsrI	ACTGG	3 cut(s)	884, 1369, 1686
BssECI	CCNNGG	3 cut(s)	810, 1407, 1520
BssMI	GATC	7 cut(s)	71, 208, 980, 1168, 1311, 1453, 1706
BssT1I	CCWWGG	2 cut(s)	810, 1407
Bst2UI	CCWGG	2 cut(s)	1492, 1521
Bst4CI	ACNGT	7 cut(s)	457, 509, 950, 1061, 1128, 1243, 1264
Bst6I	CTCTTC	3 cut(s)	528, 1001, 1250
BstAUI	TGTACA	1 cut(s)	1726
BstDEI	CTNAG	2 cut(s)	51, 1184
BstDSI	CCRYGG	1 cut(s)	810
BstENI	CCTNNNNNAGG	2 cut(s)	708, 1319
BstF5I	GGATG	6 cut(s)	613, 869, 1130, 1637, 1714, 1743
BstH2I	RGCGCY	1 cut(s)	1735
BstHHI	GCGC	1 cut(s)	1734
BstKTI	GATC	7 cut(s)	74, 211, 983, 1171, 1314, 1456, 1709
BstMAI	GTCTC	4 cut(s)	952, 1516, 1540, 1738
BstMBI	GATC	7 cut(s)	71, 208, 980, 1168, 1311, 1453, 1706
BstMWI	GCNNNNNNNGC	4 cut(s)	36, 149, 1643, 1652
BstNI	CCWGG	2 cut(s)	1492, 1521
BstNSI	RCATGY	2 cut(s)	554, 1307
BstSCI	CCNGG	2 cut(s)	1490, 1519
BstSLI	GKGCMC	1 cut(s)	1599
BstV1I	GCAGC	1 cut(s)	1127
BstV2I	GAAGAC	1 cut(s)	546
BstX2I	RGATCY	3 cut(s)	208, 1311, 1706
BstYI	RGATCY	3 cut(s)	208, 1311, 1706
Bsu36I	CCTNAGG	1 cut(s)	51
BsuI	GTATCC	1 cut(s)	586
BsuRI	GGCC	1 cut(s)	1030
BtgI	CCRYGG	1 cut(s)	810
BtsCI	GGATG	6 cut(s)	613, 869, 1130, 1637, 1714, 1743
BtsI	GCAGTG	1 cut(s)	1599
BtsIMutI	CAGTG	4 cut(s)	508, 877, 1599, 1679
CaiI	CAGNNNCTG	1 cut(s)	507
CfoI	GCGC	1 cut(s)	1734
Cfr13I	GGNCC	1 cut(s)	89
Csp6I	GTAC	6 cut(s)	5, 453, 557, 807, 1611, 1727
CviAII	CATG	7 cut(s)	125, 551, 689, 728, 811, 1304, 1376
CviQI	GTAC	6 cut(s)	5, 453, 557, 807, 1611, 1727
DdeI	CTNAG	2 cut(s)	51, 1184
DpnI	GATC	7 cut(s)	73, 210, 982, 1170, 1313, 1455, 1708
DpnII	GATC	7 cut(s)	71, 208, 980, 1168, 1311, 1453, 1706
Eam1104I	CTCTTC	3 cut(s)	528, 1001, 1250
EarI	CTCTTC	3 cut(s)	528, 1001, 1250
Eco130I	CCWWGG	2 cut(s)	810, 1407
Eco24I	GRGCYC	1 cut(s)	1416
Eco31I	GGTCTC	3 cut(s)	952, 1516, 1738
Eco47I	GGWCC	1 cut(s)	89
Eco57I	CTGAAG	1 cut(s)	1343
Eco81I	CCTNAGG	1 cut(s)	51
Eco88I	CYCGRG	2 cut(s)	60, 421
EcoNI	CCTNNNNNAGG	2 cut(s)	708, 1319
EcoO109I	RGGNCCY	1 cut(s)	89
EcoRII	CCWGG	2 cut(s)	1490, 1519
EcoT14I	CCWWGG	2 cut(s)	810, 1407
EcoT38I	GRGCYC	1 cut(s)	1416
ErhI	CCWWGG	2 cut(s)	810, 1407
FaeI	CATG	7 cut(s)	128, 554, 692, 731, 814, 1307, 1379
FaqI	GGGAC	3 cut(s)	102, 412, 1537
FatI	CATG	7 cut(s)	124, 550, 688, 727, 810, 1303, 1375
FauNDI	CATATG	2 cut(s)	1070, 1723
Fnu4HI	GCNGC	2 cut(s)	1116, 1447
FokI	GGATG	6 cut(s)	620, 856, 1117, 1624, 1701, 1750
FriOI	GRGCYC	1 cut(s)	1416
Fsp4HI	GCNGC	2 cut(s)	1116, 1447
GlaI	GCGC	1 cut(s)	1733
GluI	GCNGC	2 cut(s)	1116, 1447
GsuI	CTGGAG	3 cut(s)	876, 901, 1533
HaeII	RGCGCY	1 cut(s)	1735
HaeIII	GGCC	1 cut(s)	1030
HapII	CCGG	2 cut(s)	1024, 1735
HhaI	GCGC	1 cut(s)	1734
Hin1II	CATG	7 cut(s)	128, 554, 692, 731, 814, 1307, 1379
Hin6I	GCGC	1 cut(s)	1732
HinP1I	GCGC	1 cut(s)	1732
HincII	GTYRAC	3 cut(s)	460, 1488, 1576
HindII	GTYRAC	3 cut(s)	460, 1488, 1576
HindIII	AAGCTT	2 cut(s)	1385, 1427
HinfI	GANTC	4 cut(s)	121, 352, 859, 1543
HpaI	GTTAAC	1 cut(s)	1488
HpaII	CCGG	2 cut(s)	1024, 1735
HphI	GGTGA	2 cut(s)	854, 1071
Hpy166II	GTNNAC	7 cut(s)	158, 418, 460, 946, 1079, 1488, 1576
Hpy188I	TCNGA	7 cut(s)	351, 637, 685, 1045, 1337, 1362, 1762
Hpy188III	TCNNGA	8 cut(s)	69, 97, 668, 893, 1148, 1208, 1481, 1515
Hpy8I	GTNNAC	7 cut(s)	158, 418, 460, 946, 1079, 1488, 1576
HpyAV	CCTTC	9 cut(s)	104, 262, 421, 650, 1164, 1207, 1324, 1467, 1800
HpyCH4III	ACNGT	7 cut(s)	457, 509, 950, 1061, 1128, 1243, 1264
HpyCH4IV	ACGT	1 cut(s)	1040
HpyCH4V	TGCA	8 cut(s)	331, 720, 1074, 1110, 1238, 1502, 1592, 1655
HpyF10VI	GCNNNNNNNGC	4 cut(s)	36, 149, 1643, 1652
HpyF3I	CTNAG	2 cut(s)	51, 1184
HpySE526I	ACGT	1 cut(s)	1040
Hsp92II	CATG	7 cut(s)	128, 554, 692, 731, 814, 1307, 1379
HspAI	GCGC	1 cut(s)	1732
KpnI	GGTACC	1 cut(s)	8
KspAI	GTTAAC	1 cut(s)	1488
Kzo9I	GATC	7 cut(s)	71, 208, 980, 1168, 1311, 1453, 1706
LmnI	GCTCC	2 cut(s)	895, 1411
Lsp1109I	GCAGC	1 cut(s)	1127
LweI	GCATC	4 cut(s)	878, 1511, 1646, 1723
MaeII	ACGT	1 cut(s)	1040
MaeIII	GTNAC	4 cut(s)	503, 965, 1055, 1276
MalI	GATC	7 cut(s)	73, 210, 982, 1170, 1313, 1455, 1708
MboI	GATC	7 cut(s)	71, 208, 980, 1168, 1311, 1453, 1706
MfeI	CAATTG	2 cut(s)	1119, 1617
MflI	RGATCY	3 cut(s)	208, 1311, 1706
MhlI	GDGCHC	3 cut(s)	831, 1416, 1599
MmeI	TCCRAC	1 cut(s)	823
MroXI	GAANNNNTTC	1 cut(s)	484
MseI	TTAA	6 cut(s)	753, 1002, 1020, 1191, 1487, 1668
MspI	CCGG	2 cut(s)	1024, 1735
MspR9I	CCNGG	2 cut(s)	1492, 1521
MunI	CAATTG	2 cut(s)	1119, 1617
Mva1269I	GAATGC	3 cut(s)	722, 1495, 1594
MvaI	CCWGG	2 cut(s)	1492, 1521
MwoI	GCNNNNNNNGC	4 cut(s)	36, 149, 1643, 1652
NcoI	CCATGG	1 cut(s)	810
NdeI	CATATG	2 cut(s)	1070, 1723
NdeII	GATC	7 cut(s)	71, 208, 980, 1168, 1311, 1453, 1706
NlaIII	CATG	7 cut(s)	128, 554, 692, 731, 814, 1307, 1379
NlaIV	GGNNCC	8 cut(s)	6, 57, 90, 210, 702, 1313, 1413, 1692
NmuCI	GTSAC	1 cut(s)	503
NspI	RCATGY	2 cut(s)	554, 1307
PaeR7I	CTCGAG	1 cut(s)	60
PciI	ACATGT	2 cut(s)	550, 1303
PctI	GAATGC	3 cut(s)	722, 1495, 1594
PdmI	GAANNNNTTC	1 cut(s)	484
PfeI	GAWTC	4 cut(s)	121, 352, 859, 1543
PflMI	CCANNNNNTGG	2 cut(s)	879, 1648
PkrI	GCNGC	2 cut(s)	1117, 1448
PpuMI	RGGWCCY	1 cut(s)	89
PscI	ACATGT	2 cut(s)	550, 1303
Psp5II	RGGWCCY	1 cut(s)	89
Psp6I	CCWGG	2 cut(s)	1490, 1519
PspGI	CCWGG	2 cut(s)	1490, 1519
PspN4I	GGNNCC	8 cut(s)	6, 57, 90, 210, 702, 1313, 1413, 1692
PspPI	GGNCC	1 cut(s)	89
PspPPI	RGGWCCY	1 cut(s)	89
PspXI	VCTCGAGB	1 cut(s)	60
PstNI	CAGNNNCTG	1 cut(s)	507
PsuI	RGATCY	3 cut(s)	208, 1311, 1706
RsaI	GTAC	6 cut(s)	6, 454, 558, 808, 1612, 1728
RsaNI	GTAC	6 cut(s)	5, 453, 557, 807, 1611, 1727
SaqAI	TTAA	6 cut(s)	753, 1002, 1020, 1191, 1487, 1668
SatI	GCNGC	2 cut(s)	1116, 1447
Sau3AI	GATC	7 cut(s)	71, 208, 980, 1168, 1311, 1453, 1706
Sau96I	GGNCC	1 cut(s)	89
ScaI	AGTACT	1 cut(s)	1612
ScrFI	CCNGG	2 cut(s)	1492, 1521
SduI	GDGCHC	3 cut(s)	831, 1416, 1599
SfaNI	GCATC	4 cut(s)	878, 1511, 1646, 1723
Sfr274I	CTCGAG	1 cut(s)	60
SinI	GGWCC	1 cut(s)	89
SlaI	CTCGAG	1 cut(s)	60
SmlI	CTYRAG	2 cut(s)	60, 1479
SmoI	CTYRAG	2 cut(s)	60, 1479
SsiI	CCGC	2 cut(s)	8, 1446
SspI	AATATT	1 cut(s)	1849
StyD4I	CCNGG	2 cut(s)	1490, 1519
StyI	CCWWGG	2 cut(s)	810, 1407
TaaI	ACNGT	7 cut(s)	457, 509, 950, 1061, 1128, 1243, 1264
TaiI	ACGT	1 cut(s)	1043
TaqI	TCGA	2 cut(s)	61, 1147
TatI	WGTACW	3 cut(s)	556, 1610, 1726
TauI	GCSGC	1 cut(s)	1449
TfiI	GAWTC	4 cut(s)	121, 352, 859, 1543
Tru1I	TTAA	6 cut(s)	753, 1002, 1020, 1191, 1487, 1668
Tru9I	TTAA	6 cut(s)	753, 1002, 1020, 1191, 1487, 1668
TscAI	CASTG	4 cut(s)	508, 884, 1599, 1686
TseFI	GTSAC	1 cut(s)	503
TseI	GCWGC	1 cut(s)	1115
Tsp45I	GTSAC	1 cut(s)	503
TspDTI	ATGAA	6 cut(s)	113, 315, 716, 914, 1239, 1688
TspGWI	ACGGA	1 cut(s)	305
TspRI	CASTG	4 cut(s)	508, 884, 1599, 1686
Van91I	CCANNNNNTGG	2 cut(s)	879, 1648
VpaK11BI	GGWCC	1 cut(s)	89
XagI	CCTNNNNNAGG	2 cut(s)	708, 1319
XapI	RAATTY	4 cut(s)	723, 781, 1012, 1224
XbaI	TCTAGA	1 cut(s)	68
XceI	RCATGY	2 cut(s)	554, 1307
XhoI	CTCGAG	1 cut(s)	60
XmnI	GAANNNNTTC	1 cut(s)	484
ZrmI	AGTACT	1 cut(s)	1612

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.