Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0009697

Physical Location & Seq

Genomic Coordinates Forward (+)

21681413 .. 21686950

Gene Structure 5538 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1130300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGGTATTGCAGCGGAGGTTGGATTATGGCTTCAGTGGCTACCGGATGCCCGAGGTTCCTCGAGCTTCTAGATCAGCTAGGGGGAGGGGACCTATCAGGAAGAAACTTGAGGCCAATCAGATTCATGCGTTTGAGATTTTGGCTAGTGTAGCTGGTAAATTATTGCAGGAGAGCAAGGATCCCCCACCGACTGATGATTCTTGTGGAAAGGACCAGCATTTCAAATTTGGCGGTATTACTAAAAGTGAACAACAGGATAAAGGAAGCTTGTTGAAGGAAGAACCTTGTGAGTTGGGAAGCTGTGATGAGGAAACGTTTTTATACGTGCACGGGTTGCAAGAGCGCAGGAAAAGCTATACGTTGAATGGGGTTTCACATTCTCAGGAAGATTTTAGTTATGAGATCAACACGGTGTCAAAAAGCCTAGATTCAGAGAGGATCAATTTTGGTAAGGGATTGGGTGCGGTTGATAGCAGAAATTCTTGTGGAAGCTTTTCTAACAAAGTAGTCGATGACTCTACCCTATCTGGAGATTCCATTGCAGAGAAGCCACAGGGTCTATTTAAGAGGAAGCGAGTGACTGAACCATCACAGGATACGAGTATAAAGGAAGAAAGAACCGAGTTTCTCGGCAGTTCAGAGGATGTAATGGAAGTTGAAGAAGGGCCTCATGAGCTGGTCAGTTCTAGACATGATGTGAAGACTCTGTTTTCAGGGGACTGCAAAAATCACGGTCCTTTTCTCTGCCATTGTGCTAACATTAGAGTAGTTAATAGAGATGATGACGAAAACACCATGACAAAGGAATTTGAACATCCACCAGACGACGGTGATAAGAAAATAACAAATCTGGCTGCACCCGGTCATGATGGGCAAATAAGGCAAGCTAACTGTAACTGGAGAACTTGTTACGCACACCAAAGGTCACAAAAGATATATCCTTTCAAAAAGAGAAAGTTCTTTAATTGGAGGCCACTCGCTACATCTGATAGAGGGTGTAACTGTGAAGGCATATTTAGCTCTCCTGACAAGATACTAAATGGCGACAACTGCTGCGCAGTTGGATCATCCTCAACAACGGGTCAGCAAGTACCTCCAAAGTCTAACGATTGTAATGTGAAGCTTAGCATTAAATCCTTCAAGGTTCCAGAGCTCTTTATTGAAGTTCCTACAACCGCAACTGTTGGTTCGTTGAAGAGAACAGTAATGGAGGCAGTAACGTCTATACTCGGAGATGGATTACATGTTGGCATCCTGGTCCAGGGAAAAAAGGTCAGAGATGACAACAAAACTCTACTTCAGACAGGGATTTCTCAGGATGACAAGCGACATAATTTGGGTTTCATCTTGGAGCCCAAACGGGCAAAGCTTACATATCCTCCATGCAGTGAAGATCCATCTTTGGTATCTGGCAGATCTCAGGAGTTAACCAGGCATTCGGCATCTTTGGTGTCACAACCTGGGACTTCAGATGTCTCGATGAGTCCTCCAGTACTAAGTTTGGGTGGCTGCATTGAAAGAGACTTCAAGGAAGTTCCTTCTCTTGCTAGTACCTCAACTGACAAAAACCTGCCAACATCCCAAGCTCTCATCGCAGTTCCACCAATTAGCATGAAGGCATTGGCTGTGGTTCCTTTTCATCGGAAATCTGGGCATCAAGAGTATGTACAGCGCCGAATCAGGAGACCTTTCTCTGTTCCAGAAGTAGAAGCATTGGTTCAGGCTGTTGAGAAACTCGGAACGGGAAGGTGGCGCGATGTTAAGTTGCGTGCTTTCGAAAGTACAAAACATCGAACTTACGTGGATCTGAAGGACAAGTGGAAAACATTGGTGCACACAGCGAGGATCTCCCCGCAGCAAAGGAGGGGAGAGCCGGTTCCACAGGAGCTCTTGGACCGCGTCCTAGCCGCCCATGCCTACTGGTCTCAGCGGCACGCCAAGCAGCAGGTGAAAGCGGCGGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000723 GO:0000781 GO:0000782 GO:0000783 GO:0000784 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003691 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0031627 GO:0031974 GO:0031981 GO:0032200 GO:0032991 GO:0032993 GO:0034641 GO:0042162 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0051276 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098687 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

655

Amino Acids

72.82

Weight (kDa)

8.81

Isoelectric Point (pI)

50.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ubiquitin_TPR1	PF23603	372 - 440	3.5e-39	Telomere repeat-binding protein 1-like, ubiquitin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009697)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g13540 FvH4_6g13540
malus_domestica	MD04G1130300.v1.1 MD12G1143400.v1.1
prunus_persica	Prupe.6G256900_v2.0.a1 Prupe.6G256900_v2.0.a1 Prupe.6G256900_v2.0.a1 Prupe.6G256900_v2.0.a1
pyrus_communis	pycom12g13810
rosa_chinensis	RchiOBHm_Chr3g0466401
rosa_laevigata	RLG00000024577
rosa_multiflora	Rmu_sc0001716.1_g000002 Rmu_sc0003332.1_g000029 Rmu_sc0003480.1_g000002
rosa_roxburghii	Rroxscaffold_6G00414500
rosa_rugosa	Rorug03G0081500 Rorug03G0081600 Rorug03G0081700
rosa_samantha	Rh3AG128100 Rh3BG149400 Rh3DG150100
rosa_wichuraiana	Rw3G012100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1936
Acc16I	TGCGCA	1 cut(s)	1057
Acc36I	ACCTGC	2 cut(s)	1578, 1936
AccII	CGCG	2 cut(s)	1755, 1899
AclI	AACGTT	1 cut(s)	314
AclWI	GGATC	7 cut(s)	173, 186, 446, 1072, 1388, 1812, 1853
AcsI	RAATTY	3 cut(s)	224, 478, 806
AcuI	CTGAAG	4 cut(s)	16, 1283, 1452, 1829
AfaI	GTAC	5 cut(s)	1092, 1494, 1552, 1668, 1783
AfiI	CCNNNNNNNGG	2 cut(s)	827, 1261
AflIII	ACRYGT	1 cut(s)	1243
AjnI	CCWGG	4 cut(s)	1254, 1260, 1430, 1459
AloI	GAACNNNNNNTCC	2 cut(s)	1860, 1892
Alw21I	GWGCWC	4 cut(s)	330, 1155, 1836, 1890
Alw26I	GTCTC	4 cut(s)	1480, 1515, 1678, 1929
Alw44I	GTGCAC	2 cut(s)	326, 1832
AlwI	GGATC	7 cut(s)	173, 186, 446, 1072, 1388, 1812, 1853
Ama87I	CYCGRG	2 cut(s)	50, 60
AoxI	GGCC	3 cut(s)	111, 665, 971
ApaLI	GTGCAC	2 cut(s)	326, 1832
ApeKI	GCWGC	6 cut(s)	10, 854, 1053, 1509, 1855, 1942
ApoI	RAATTY	3 cut(s)	224, 478, 806
Asp700I	GAANNNNTTC	1 cut(s)	493
AspLEI	GCGC	4 cut(s)	345, 1058, 1674, 1755
AspS9I	GGNCC	6 cut(s)	89, 211, 665, 734, 1258, 1894
AsuC2I	CCSGG	1 cut(s)	861
AsuHPI	GGTGA	2 cut(s)	842, 1960
AsuII	TTCGAA	1 cut(s)	1776
AvaI	CYCGRG	2 cut(s)	50, 60
AvaII	GGWCC	5 cut(s)	89, 211, 734, 1258, 1894
BaeGI	GKGCMC	2 cut(s)	330, 1836
BamHI	GGATCC	1 cut(s)	178
BanII	GRGCYC	3 cut(s)	1155, 1356, 1890
BbsI	GAAGAC	1 cut(s)	707
Bbv12I	GWGCWC	4 cut(s)	330, 1155, 1836, 1890
BbvI	GCAGC	6 cut(s)	22, 841, 1040, 1496, 1867, 1954
BccI	CCATC	4 cut(s)	595, 863, 1229, 1405
BciT130I	CCWGG	4 cut(s)	1256, 1262, 1432, 1461
BciVI	GTATCC	1 cut(s)	589
BcnI	CCSGG	1 cut(s)	861
BcoDI	GTCTC	4 cut(s)	1480, 1515, 1678, 1929
BfaI	CTAG	7 cut(s)	69, 78, 144, 425, 687, 1548, 1904
BfoI	RGCGCY	1 cut(s)	1675
BfuAI	ACCTGC	2 cut(s)	1578, 1936
BfuI	GTATCC	1 cut(s)	589
BglII	AGATCT	1 cut(s)	1415
BisI	GCNGC	9 cut(s)	11, 855, 1054, 1510, 1856, 1908, 1931, 1943, 1956
BlpI	GCTNAGC	1 cut(s)	1124
BlsI	GCNGC	9 cut(s)	12, 856, 1055, 1511, 1857, 1909, 1932, 1944, 1957
BmcAI	AGTACT	1 cut(s)	1494
Bme1390I	CCNGG	5 cut(s)	861, 1256, 1262, 1432, 1461
Bme18I	GGWCC	5 cut(s)	89, 211, 734, 1258, 1894
BmeT110I	CYCGRG	2 cut(s)	50, 60
BmgT120I	GGNCC	6 cut(s)	89, 211, 665, 734, 1258, 1894
BmiI	GGNNCC	7 cut(s)	57, 90, 180, 1146, 1353, 1632, 1878
BmrFI	CCNGG	5 cut(s)	861, 1256, 1262, 1432, 1461
BmsI	GCATC	4 cut(s)	36, 1260, 1451, 1663
BpiI	GAAGAC	1 cut(s)	707
BpmI	CTGGAG	3 cut(s)	549, 919, 1473
Bpu1102I	GCTNAGC	1 cut(s)	1124
Bpu14I	TTCGAA	1 cut(s)	1776
BpuEI	CTTGAG	1 cut(s)	128
BpuMI	CCSGG	1 cut(s)	861
BsaAI	YACGTR	2 cut(s)	325, 1801
BsaI	GGTCTC	2 cut(s)	1678, 1929
BsaJI	CCNNGG	3 cut(s)	51, 1261, 1460
BsaWI	WCCGGW	1 cut(s)	42
BsaXI	ACNNNNNCTCC	6 cut(s)	892, 922, 1363, 1393, 1860, 1890
Bsc4I	CCNNNNNNNGG	2 cut(s)	827, 1261
Bse118I	RCCGGY	1 cut(s)	1873
Bse1I	ACTGG	3 cut(s)	902, 1490, 1925
Bse3DI	GCAATG	1 cut(s)	537
BseBI	CCWGG	4 cut(s)	1256, 1262, 1432, 1461
BseDI	CCNNGG	3 cut(s)	51, 1261, 1460
BseGI	GGATG	7 cut(s)	51, 649, 814, 1067, 1251, 1324, 1577
BseLI	CCNNNNNNNGG	2 cut(s)	827, 1261
BseMI	GCAATG	1 cut(s)	537
BseMII	CTCAG	4 cut(s)	395, 1328, 1433, 1940
BseNI	ACTGG	3 cut(s)	902, 1490, 1925
BseSI	GKGCMC	2 cut(s)	330, 1836
BseXI	GCAGC	6 cut(s)	22, 841, 1040, 1496, 1867, 1954
BsgI	GTGCAG	1 cut(s)	840
Bsh1236I	CGCG	2 cut(s)	1755, 1899
BshFI	GGCC	3 cut(s)	113, 667, 973
BsiHKAI	GWGCWC	4 cut(s)	330, 1155, 1836, 1890
BsiHKCI	CYCGRG	2 cut(s)	50, 60
BsiSI	CCGG	3 cut(s)	43, 861, 1874
BslFI	GGGAC	3 cut(s)	102, 731, 1477
BslI	CCNNNNNNNGG	2 cut(s)	827, 1261
BsmAI	GTCTC	4 cut(s)	1480, 1515, 1678, 1929
BsmFI	GGGAC	3 cut(s)	102, 731, 1477
BsmI	GAATGC	1 cut(s)	1435
BsnI	GGCC	3 cut(s)	113, 667, 973
Bso31I	GGTCTC	2 cut(s)	1678, 1929
BsoBI	CYCGRG	2 cut(s)	50, 60
Bsp119I	TTCGAA	1 cut(s)	1776
Bsp1286I	GDGCHC	5 cut(s)	330, 1155, 1356, 1836, 1890
Bsp1407I	TGTACA	1 cut(s)	1666
Bsp143I	GATC	9 cut(s)	71, 178, 402, 438, 1064, 1393, 1415, 1804, 1845
Bsp1720I	GCTNAGC	1 cut(s)	1124
BspANI	GGCC	3 cut(s)	113, 667, 973
BspCNI	CTCAG	4 cut(s)	394, 1327, 1432, 1939
BspFNI	CGCG	2 cut(s)	1755, 1899
BspHI	TCATGA	2 cut(s)	670, 865
BspLI	GGNNCC	7 cut(s)	57, 90, 180, 1146, 1353, 1632, 1878
BspMI	ACCTGC	2 cut(s)	1578, 1936
BspPI	GGATC	7 cut(s)	173, 186, 446, 1072, 1388, 1812, 1853
BspT104I	TTCGAA	1 cut(s)	1776
BspTNI	GGTCTC	2 cut(s)	1678, 1929
BsrDI	GCAATG	1 cut(s)	537
BsrFI	RCCGGY	1 cut(s)	1873
BsrGI	TGTACA	1 cut(s)	1666
BsrI	ACTGG	3 cut(s)	902, 1490, 1925
BssAI	RCCGGY	1 cut(s)	1873
BssECI	CCNNGG	3 cut(s)	51, 1261, 1460
BssMI	GATC	9 cut(s)	71, 178, 402, 438, 1064, 1393, 1415, 1804, 1845
Bst2UI	CCWGG	4 cut(s)	1256, 1262, 1432, 1461
Bst4CI	ACNGT	7 cut(s)	412, 734, 830, 893, 1004, 1183, 1204
Bst6I	CTCTTC	1 cut(s)	1190
BstAPI	GCANNNNNTGC	1 cut(s)	334
BstAUI	TGTACA	1 cut(s)	1666
BstBAI	YACGTR	2 cut(s)	325, 1801
BstBI	TTCGAA	1 cut(s)	1776
BstC8I	GCNNGC	3 cut(s)	885, 1770, 1935
BstDEI	CTNAG	6 cut(s)	381, 1124, 1314, 1419, 1496, 1926
BstENI	CCTNNNNNAGG	1 cut(s)	1259
BstF5I	GGATG	7 cut(s)	51, 649, 814, 1067, 1251, 1324, 1577
BstFNI	CGCG	2 cut(s)	1755, 1899
BstH2I	RGCGCY	1 cut(s)	1675
BstHHI	GCGC	4 cut(s)	345, 1058, 1674, 1755
BstKTI	GATC	9 cut(s)	74, 181, 405, 441, 1067, 1396, 1418, 1807, 1848
BstMAI	GTCTC	4 cut(s)	1480, 1515, 1678, 1929
BstMBI	GATC	9 cut(s)	71, 178, 402, 438, 1064, 1393, 1415, 1804, 1845
BstNI	CCWGG	4 cut(s)	1256, 1262, 1432, 1461
BstNSI	RCATGY	1 cut(s)	1247
BstSCI	CCNGG	5 cut(s)	859, 1254, 1260, 1430, 1459
BstSLI	GKGCMC	2 cut(s)	330, 1836
BstUI	CGCG	2 cut(s)	1755, 1899
BstV1I	GCAGC	6 cut(s)	22, 841, 1040, 1496, 1867, 1954
BstV2I	GAAGAC	1 cut(s)	707
BstX2I	RGATCY	5 cut(s)	178, 1393, 1415, 1804, 1845
BstYI	RGATCY	5 cut(s)	178, 1393, 1415, 1804, 1845
BsuI	GTATCC	1 cut(s)	589
BsuRI	GGCC	3 cut(s)	113, 667, 973
BtgZI	GCGATG	2 cut(s)	1576, 1770
BtsCI	GGATG	7 cut(s)	51, 649, 814, 1067, 1251, 1324, 1577
BtsI	GCAGTG	1 cut(s)	1393
BtsIMutI	CAGTG	2 cut(s)	40, 1393
BveI	ACCTGC	2 cut(s)	1578, 1936
Cac8I	GCNNGC	3 cut(s)	885, 1770, 1935
CciI	TCATGA	2 cut(s)	670, 865
CfoI	GCGC	4 cut(s)	345, 1058, 1674, 1755
Cfr10I	RCCGGY	1 cut(s)	1873
Cfr13I	GGNCC	6 cut(s)	89, 211, 665, 734, 1258, 1894
CseI	GACGC	1 cut(s)	1888
Csp6I	GTAC	5 cut(s)	1091, 1493, 1551, 1667, 1782
CviAII	CATG	9 cut(s)	125, 671, 692, 796, 866, 1244, 1383, 1612, 1913
CviQI	GTAC	5 cut(s)	1091, 1493, 1551, 1667, 1782
DdeI	CTNAG	6 cut(s)	381, 1124, 1314, 1419, 1496, 1926
DpnI	GATC	9 cut(s)	73, 180, 404, 440, 1066, 1395, 1417, 1806, 1847
DpnII	GATC	9 cut(s)	71, 178, 402, 438, 1064, 1393, 1415, 1804, 1845
Eam1104I	CTCTTC	1 cut(s)	1190
EarI	CTCTTC	1 cut(s)	1190
Ecl136II	GAGCTC	2 cut(s)	1153, 1888
Eco24I	GRGCYC	3 cut(s)	1155, 1356, 1890
Eco31I	GGTCTC	2 cut(s)	1678, 1929
Eco47I	GGWCC	5 cut(s)	89, 211, 734, 1258, 1894
Eco53kI	GAGCTC	2 cut(s)	1153, 1888
Eco57I	CTGAAG	4 cut(s)	16, 1283, 1452, 1829
Eco88I	CYCGRG	2 cut(s)	50, 60
EcoICRI	GAGCTC	2 cut(s)	1153, 1888
EcoNI	CCTNNNNNAGG	1 cut(s)	1259
EcoO109I	RGGNCCY	2 cut(s)	89, 665
EcoRII	CCWGG	4 cut(s)	1254, 1260, 1430, 1459
EcoT38I	GRGCYC	3 cut(s)	1155, 1356, 1890
FaeI	CATG	9 cut(s)	128, 674, 695, 799, 869, 1247, 1386, 1615, 1916
FaqI	GGGAC	3 cut(s)	102, 731, 1477
FatI	CATG	9 cut(s)	124, 670, 691, 795, 865, 1243, 1382, 1611, 1912
FauI	CCCGC	1 cut(s)	1860
Fnu4HI	GCNGC	9 cut(s)	11, 855, 1054, 1510, 1856, 1908, 1931, 1943, 1956
FokI	GGATG	7 cut(s)	58, 656, 801, 1054, 1238, 1331, 1564
FriOI	GRGCYC	3 cut(s)	1155, 1356, 1890
Fsp4HI	GCNGC	9 cut(s)	11, 855, 1054, 1510, 1856, 1908, 1931, 1943, 1956
FspBI	CTAG	7 cut(s)	69, 78, 144, 425, 687, 1548, 1904
FspI	TGCGCA	1 cut(s)	1057
GlaI	GCGC	4 cut(s)	344, 1057, 1673, 1754
GluI	GCNGC	9 cut(s)	11, 855, 1054, 1510, 1856, 1908, 1931, 1943, 1956
GsuI	CTGGAG	3 cut(s)	549, 919, 1473
HaeII	RGCGCY	1 cut(s)	1675
HaeIII	GGCC	3 cut(s)	113, 667, 973
HapII	CCGG	3 cut(s)	43, 861, 1874
HgaI	GACGC	1 cut(s)	1888
HhaI	GCGC	4 cut(s)	345, 1058, 1674, 1755
Hin1II	CATG	9 cut(s)	128, 674, 695, 799, 869, 1247, 1386, 1615, 1916
Hin6I	GCGC	4 cut(s)	343, 1056, 1672, 1753
HinP1I	GCGC	4 cut(s)	343, 1056, 1672, 1753
HincII	GTYRAC	1 cut(s)	1428
HindII	GTYRAC	1 cut(s)	1428
HindIII	AAGCTT	4 cut(s)	265, 490, 1121, 1367
HinfI	GANTC	8 cut(s)	121, 197, 428, 515, 533, 703, 1483, 1677
HpaI	GTTAAC	1 cut(s)	1428
HpaII	CCGG	3 cut(s)	43, 861, 1874
HphI	GGTGA	2 cut(s)	842, 1960
Hpy166II	GTNNAC	4 cut(s)	248, 328, 1428, 1834
Hpy8I	GTNNAC	4 cut(s)	248, 328, 1428, 1834
Hpy99I	CGWCG	1 cut(s)	830
HpyAV	CCTTC	8 cut(s)	268, 656, 1001, 1147, 1548, 1609, 1740, 1804
HpyCH4III	ACNGT	7 cut(s)	412, 734, 830, 893, 1004, 1183, 1204
HpyCH4IV	ACGT	5 cut(s)	314, 324, 359, 1220, 1800
HpyF3I	CTNAG	6 cut(s)	381, 1124, 1314, 1419, 1496, 1926
HpySE526I	ACGT	5 cut(s)	314, 324, 359, 1220, 1800
Hsp92II	CATG	9 cut(s)	128, 674, 695, 799, 869, 1247, 1386, 1615, 1916
HspAI	GCGC	4 cut(s)	343, 1056, 1672, 1753
KspAI	GTTAAC	1 cut(s)	1428
Kzo9I	GATC	9 cut(s)	71, 178, 402, 438, 1064, 1393, 1415, 1804, 1845
LmnI	GCTCC	2 cut(s)	1351, 1885
Lsp1109I	GCAGC	6 cut(s)	22, 841, 1040, 1496, 1867, 1954
LweI	GCATC	4 cut(s)	36, 1260, 1451, 1663
MaeI	CTAG	7 cut(s)	69, 78, 144, 425, 687, 1548, 1904
MaeII	ACGT	5 cut(s)	314, 324, 359, 1220, 1800
MaeIII	GTNAC	7 cut(s)	577, 893, 908, 924, 998, 1216, 1452
MalI	GATC	9 cut(s)	73, 180, 404, 440, 1066, 1395, 1417, 1806, 1847
MboI	GATC	9 cut(s)	71, 178, 402, 438, 1064, 1393, 1415, 1804, 1845
MboII	GAAGA	8 cut(s)	112, 290, 398, 623, 671, 712, 1207, 1403
MflI	RGATCY	5 cut(s)	178, 1393, 1415, 1804, 1845
MhlI	GDGCHC	5 cut(s)	330, 1155, 1356, 1836, 1890
MluCI	AATT	8 cut(s)	158, 224, 442, 478, 806, 964, 1333, 1605
MlyI	GAGTC	3 cut(s)	509, 697, 1492
MmeI	TCCRAC	1 cut(s)	1042
MroXI	GAANNNNTTC	1 cut(s)	493
MseI	TTAA	6 cut(s)	564, 771, 963, 1131, 1427, 1761
MspA1I	CMGCKG	2 cut(s)	13, 1930
MspI	CCGG	3 cut(s)	43, 861, 1874
MspR9I	CCNGG	5 cut(s)	861, 1256, 1262, 1432, 1461
Mva1269I	GAATGC	1 cut(s)	1435
MvaI	CCWGG	4 cut(s)	1256, 1262, 1432, 1461
MvnI	CGCG	2 cut(s)	1755, 1899
NciI	CCSGG	1 cut(s)	861
NdeII	GATC	9 cut(s)	71, 178, 402, 438, 1064, 1393, 1415, 1804, 1845
NlaIII	CATG	9 cut(s)	128, 674, 695, 799, 869, 1247, 1386, 1615, 1916
NlaIV	GGNNCC	7 cut(s)	57, 90, 180, 1146, 1353, 1632, 1878
NmeAIII	GCCGAG	1 cut(s)	609
NmuCI	GTSAC	3 cut(s)	577, 924, 1452
NsbI	TGCGCA	1 cut(s)	1057
NspI	RCATGY	1 cut(s)	1247
NspV	TTCGAA	1 cut(s)	1776
PaeR7I	CTCGAG	1 cut(s)	60
PagI	TCATGA	2 cut(s)	670, 865
PaqCI	CACCTGC	1 cut(s)	1936
PciI	ACATGT	1 cut(s)	1243
PctI	GAATGC	1 cut(s)	1435
PdmI	GAANNNNTTC	1 cut(s)	493
PfeI	GAWTC	5 cut(s)	121, 197, 428, 533, 1677
PflFI	GACNNNGTC	1 cut(s)	1898
PkrI	GCNGC	9 cut(s)	12, 856, 1055, 1511, 1857, 1909, 1932, 1944, 1957
PleI	GAGTC	3 cut(s)	509, 697, 1491
PpsI	GAGTC	3 cut(s)	509, 697, 1491
Ppu21I	YACGTR	2 cut(s)	325, 1801
PpuMI	RGGWCCY	1 cut(s)	89
PscI	ACATGT	1 cut(s)	1243
Psp124BI	GAGCTC	2 cut(s)	1155, 1890
Psp1406I	AACGTT	1 cut(s)	314
Psp5II	RGGWCCY	1 cut(s)	89
Psp6I	CCWGG	4 cut(s)	1254, 1260, 1430, 1459
PspGI	CCWGG	4 cut(s)	1254, 1260, 1430, 1459
PspN4I	GGNNCC	7 cut(s)	57, 90, 180, 1146, 1353, 1632, 1878
PspPI	GGNCC	6 cut(s)	89, 211, 665, 734, 1258, 1894
PspPPI	RGGWCCY	1 cut(s)	89
PspXI	VCTCGAGB	1 cut(s)	60
PsuI	RGATCY	5 cut(s)	178, 1393, 1415, 1804, 1845
PsyI	GACNNNGTC	1 cut(s)	1898
RsaI	GTAC	5 cut(s)	1092, 1494, 1552, 1668, 1783
RsaNI	GTAC	5 cut(s)	1091, 1493, 1551, 1667, 1782
SacI	GAGCTC	2 cut(s)	1155, 1890
SaqAI	TTAA	6 cut(s)	564, 771, 963, 1131, 1427, 1761
SatI	GCNGC	9 cut(s)	11, 855, 1054, 1510, 1856, 1908, 1931, 1943, 1956
Sau3AI	GATC	9 cut(s)	71, 178, 402, 438, 1064, 1393, 1415, 1804, 1845
Sau96I	GGNCC	6 cut(s)	89, 211, 665, 734, 1258, 1894
ScaI	AGTACT	1 cut(s)	1494
SchI	GAGTC	3 cut(s)	509, 697, 1492
ScrFI	CCNGG	5 cut(s)	861, 1256, 1262, 1432, 1461
SduI	GDGCHC	5 cut(s)	330, 1155, 1356, 1836, 1890
SfaNI	GCATC	4 cut(s)	36, 1260, 1451, 1663
Sfr274I	CTCGAG	1 cut(s)	60
SfuI	TTCGAA	1 cut(s)	1776
SinI	GGWCC	5 cut(s)	89, 211, 734, 1258, 1894
SlaI	CTCGAG	1 cut(s)	60
SmlI	CTYRAG	2 cut(s)	60, 107
SmoI	CTYRAG	2 cut(s)	60, 107
Sse9I	AATT	8 cut(s)	158, 224, 442, 478, 806, 964, 1333, 1605
SspMI	CTAG	7 cut(s)	69, 78, 144, 425, 687, 1548, 1904
SstI	GAGCTC	2 cut(s)	1155, 1890
StyD4I	CCNGG	5 cut(s)	859, 1254, 1260, 1430, 1459
TaaI	ACNGT	7 cut(s)	412, 734, 830, 893, 1004, 1183, 1204
TaiI	ACGT	5 cut(s)	317, 327, 362, 1223, 1803
TaqI	TCGA	5 cut(s)	61, 510, 1478, 1776, 1792
TasI	AATT	8 cut(s)	158, 224, 442, 478, 806, 964, 1333, 1605
TatI	WGTACW	3 cut(s)	1492, 1666, 1781
TauI	GCSGC	3 cut(s)	1910, 1933, 1958
TfiI	GAWTC	5 cut(s)	121, 197, 428, 533, 1677
Tru1I	TTAA	6 cut(s)	564, 771, 963, 1131, 1427, 1761
Tru9I	TTAA	6 cut(s)	564, 771, 963, 1131, 1427, 1761
TscAI	CASTG	2 cut(s)	40, 1393
TseFI	GTSAC	3 cut(s)	577, 924, 1452
TseI	GCWGC	6 cut(s)	10, 854, 1053, 1509, 1855, 1942
Tsp45I	GTSAC	3 cut(s)	577, 924, 1452
TspDTI	ATGAA	4 cut(s)	113, 1333, 1628, 1628
TspRI	CASTG	2 cut(s)	40, 1393
Tth111I	GACNNNGTC	1 cut(s)	1898
VneI	GTGCAC	2 cut(s)	326, 1832
VpaK11BI	GGWCC	5 cut(s)	89, 211, 734, 1258, 1894
XagI	CCTNNNNNAGG	1 cut(s)	1259
XapI	RAATTY	3 cut(s)	224, 478, 806
XbaI	TCTAGA	2 cut(s)	68, 686
XceI	RCATGY	1 cut(s)	1247
XhoI	CTCGAG	1 cut(s)	60
XmnI	GAANNNNTTC	1 cut(s)	493
XspI	CTAG	7 cut(s)	69, 78, 144, 425, 687, 1548, 1904
ZrmI	AGTACT	1 cut(s)	1494

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.