Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0009697

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG150100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGGTACCGCAGAGGAGGGTGGATTATGGCTTCAATGGCTACCAAGTGCCTGAGGTTCCTCGAGCTTCTAGATCAGCTAGGGGAAAGGGATCTATCAGGAAGAAACTTGAAGGCAACCAGATTCATGCGTTTGAGATTTTGGCTAGTGTAGCTGGTAAACTATTGGAGAGTGAAAAACCTCTACCTAGTAATGCTTCTAGTGGAAAGGATCCTCATTACACGTTTGATGATACCATAAGGAAGCAACAGAATAAAGGAAACTCATTGAAGGAAGAACCTTGTGAGTGGGGAAGCTGTGATGAAGAAGCCTCTTTCCGTGCCTGTGGGGTGCAAGGGCAAAGTCATACTCTGAATCAGTTTTCACATCCACAAGAAAAATTTAGTTTTGAGATGAGCGGGACATCAAAAAGTAATGATCACTCGGGGAAGGTTTGTTTTGCTAAAAAGTTGGGTACAGTTGACAGCAATTCTTCTTGTGGAAGCTATTCTAACAAAGTAATCAGTGACTGTTTCTTATCTGGGGATTATATTGAAGAGGAAGACAAAGCACATGTTGTACTAAAGAGGAAACTAGAGGCTGAACCATCAAAGGATACAAGTGTAAAGGATGGAAAAGCCAATGTTTTAGTCTGTTCAGAAGATTTGCTAGAAATGGAAGGAAAGCCTCCTGAATTGGTCAGTTCTGAACATGATGTAAAGGTTCCTTTTTCAGGGGAATGCAAAATTCATGGTTCTTTCCCCTGCCATTGTGTTAAAGTAGTTAGTAGAGATGATGACGAAAATTCTGTTGGGTATGTCCAACCCTGTACCATGGTAGAGGAGTTTGAGCACACATCTGTTGGTGATAGGAAAATAAAGAATCTGTCAGCATCCAAGCACTGGAGAATAGCTCCAGATATGAAGATTGGGGGTTGTCATAGAACTGATGGGAAAATAAAGCAAGTTTACCGTAATGGGAGACCTTGTTACGCACATCAAAGATCACAGAAGATTTATCCTTTTAAGAAGAGAAATTTCTTTAACCGGAGGCCATTTACTACGTCTGATAGAGGCTGTAACTGTGAAAACATATGCAGTTCACCTGACAAGAGAGAAGACGGTGGCAACTGCAATGCAGCAATTGGACGGTCATCCTCAACAACAGGTCGAGAACCTTCCAAGTCCAATGATCGTAATGTGAGGCTGAGTATTAAATCCTTCAAAGTTCCCGAACTTTTCTTTGAAATTCCTACAACTGCGACTGTTGGTTCATTGAAGAGGACAGTAATGGAGGCTGTAACTTCTATACTTGGAGAGGGATTACATGTTGGGATCCTGGTTCAGGGAAAGAAGGTCAGAGATGACAGCAAAACATTACTTCAGACTGGGATTTCGCATGATGACAAGCTTGACAATTTGGGTTTTACCTTGGAGCCCAAACATTCAAAGCTTATATATTCTCAATGCGGCAATGATCCTTCCTCTGTTTCTGGCAGAACTCAAGAGTTAACCAGGCATTCTGCATCTTTGGTCTCACGACCAGGGACTTCAAATGTCTCCCTGAATCCTCCAGCAACCAATTTGGGTAGCTGTGTTGACAAAGACTTGAATGCAGTGCCCTCTCTTGCTAGTACTTCAATTGACAAAACCCCACCAGCATCCCAAGCTCTGGTTGCAGTTCCACCAATTAACGCAAAGCCACTGGCTGTGGTTCCTTTTCATAGGAGATCTGGGCATCCAGCATATGTACAGCGCCGGATGAGGAGACCTTTCTCTGTTTCAGAAGTAGAAGCATTGGTTCAGGCTGTTGAGAAACTTGGAACAGGAAGGTGGCGTGATGTTAAAATGCGTGCTTTTGATAATGCAAAACATCGAACTTATGTGGATTTGAAGGACAAGTGGAAAACATTGGTGCACACAGCAAGGATCTCACCTCAGCAAAGGAGAGGAGAACCTGTTCCTCAGGAGCTTTTGGACAGAGTCCTAGCCGCCCATGCCTACTGGTCTCAGCGGCAAGCCAAGCAGCAGCTCAGAGCAGCAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000723 GO:0000781 GO:0000782 GO:0000783 GO:0000784 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003691 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0031627 GO:0031974 GO:0031981 GO:0032200 GO:0032991 GO:0032993 GO:0034641 GO:0042162 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0051276 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098687 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

674

Amino Acids

74.62

Weight (kDa)

9.2

Isoelectric Point (pI)

44.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ubiquitin_TPR1	PF23603	392 - 460	6.8e-38	Telomere repeat-binding protein 1-like, ubiquitin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009697)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g13540 FvH4_6g13540
malus_domestica	MD04G1130300.v1.1 MD12G1143400.v1.1
prunus_persica	Prupe.6G256900_v2.0.a1 Prupe.6G256900_v2.0.a1 Prupe.6G256900_v2.0.a1 Prupe.6G256900_v2.0.a1
pyrus_communis	pycom12g13810
rosa_chinensis	RchiOBHm_Chr3g0466401
rosa_laevigata	RLG00000024577
rosa_multiflora	Rmu_sc0001716.1_g000002 Rmu_sc0003332.1_g000029 Rmu_sc0003480.1_g000002
rosa_roxburghii	Rroxscaffold_6G00414500
rosa_rugosa	Rorug03G0081500 Rorug03G0081600 Rorug03G0081700
rosa_samantha	Rh3AG128100 Rh3BG149400 Rh3DG150100
rosa_wichuraiana	Rw3G012100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	4
AccB1I	GGYRCC	1 cut(s)	4
AccB7I	CCANNNNNTGG	2 cut(s)	879, 1648
AccBSI	CCGCTC	1 cut(s)	396
AciI	CCGC	5 cut(s)	8, 396, 1446, 1968, 1990
AclWI	GGATC	7 cut(s)	97, 203, 216, 1306, 1319, 1448, 1913
AcsI	RAATTY	5 cut(s)	377, 723, 781, 1012, 1224
AcuI	CTGAAG	1 cut(s)	1343
AfaI	GTAC	6 cut(s)	6, 454, 558, 808, 1612, 1728
AfiI	CCNNNNNNNGG	4 cut(s)	710, 879, 1321, 1648
AflIII	ACRYGT	3 cut(s)	219, 550, 1303
AjnI	CCWGG	3 cut(s)	1314, 1490, 1519
AjuI	GAANNNNNNNTTGG	2 cut(s)	771, 803
AloI	GAACNNNNNNTCC	2 cut(s)	1920, 1952
Alw21I	GWGCWC	2 cut(s)	831, 1896
Alw26I	GTCTC	5 cut(s)	952, 1516, 1540, 1738, 1989
Alw44I	GTGCAC	1 cut(s)	1892
AlwI	GGATC	7 cut(s)	97, 203, 216, 1306, 1319, 1448, 1913
AlwNI	CAGNNNCTG	1 cut(s)	507
Ama87I	CYCGRG	2 cut(s)	60, 421
AoxI	GGCC	1 cut(s)	1028
ApaLI	GTGCAC	1 cut(s)	1892
ApeKI	GCWGC	5 cut(s)	1115, 2002, 2005, 2015, 2018
ApoI	RAATTY	5 cut(s)	377, 723, 781, 1012, 1224
ArsI	GACNNNNNNTTYG	2 cut(s)	1354, 1386
Asp700I	GAANNNNTTC	2 cut(s)	484, 1935
Asp718I	GGTACC	1 cut(s)	4
AspLEI	GCGC	1 cut(s)	1734
AsuHPI	GGTGA	3 cut(s)	854, 1071, 1902
AvaI	CYCGRG	2 cut(s)	60, 421
AxyI	CCTNAGG	2 cut(s)	51, 1941
BaeGI	GKGCMC	2 cut(s)	1599, 1896
BaeI	ACNNNNGTAYC	2 cut(s)	585, 618
BamHI	GGATCC	2 cut(s)	208, 1311
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	1 cut(s)	1416
BbsI	GAAGAC	2 cut(s)	546, 1101
Bbv12I	GWGCWC	2 cut(s)	831, 1896
BbvCI	CCTCAGC	1 cut(s)	1914
BbvI	GCAGC	3 cut(s)	1127, 2014, 2017
BccI	CCATC	3 cut(s)	592, 602, 920
BciT130I	CCWGG	3 cut(s)	1316, 1492, 1521
BciVI	GTATCC	1 cut(s)	586
BclI	TGATCA	1 cut(s)	415
BcoDI	GTCTC	5 cut(s)	952, 1516, 1540, 1738, 1989
BfaI	CTAG	9 cut(s)	69, 78, 144, 186, 198, 572, 647, 1608, 1964
BfoI	RGCGCY	1 cut(s)	1735
BfuI	GTATCC	1 cut(s)	586
BglII	AGATCT	1 cut(s)	1706
BisI	GCNGC	8 cut(s)	1116, 1447, 1968, 1991, 2003, 2006, 2016, 2019
BlsI	GCNGC	8 cut(s)	1117, 1448, 1969, 1992, 2004, 2007, 2017, 2020
BmcAI	AGTACT	1 cut(s)	1612
Bme1390I	CCNGG	3 cut(s)	1316, 1492, 1521
BmeT110I	CYCGRG	2 cut(s)	60, 421
BmiI	GGNNCC	7 cut(s)	6, 57, 210, 702, 1313, 1413, 1692
BmrFI	CCNGG	3 cut(s)	1316, 1492, 1521
BmrI	ACTGGG	1 cut(s)	1374
BmsI	GCATC	4 cut(s)	878, 1511, 1646, 1723
BmuI	ACTGGG	1 cut(s)	1374
BpiI	GAAGAC	2 cut(s)	546, 1101
BplI	GAGNNNNNCTC	2 cut(s)	874, 906
BpmI	CTGGAG	3 cut(s)	876, 901, 1533
Bpu10I	CCTNAGC	1 cut(s)	1914
BpuEI	CTTGAG	1 cut(s)	1464
BsaI	GGTCTC	4 cut(s)	952, 1516, 1738, 1989
BsaJI	CCNNGG	3 cut(s)	810, 1407, 1520
BsaWI	WCCGGW	1 cut(s)	1023
BsaXI	ACNNNNNCTCC	4 cut(s)	949, 979, 1920, 1950
Bsc4I	CCNNNNNNNGG	4 cut(s)	710, 879, 1321, 1648
Bse1I	ACTGG	4 cut(s)	884, 1369, 1686, 1985
Bse21I	CCTNAGG	2 cut(s)	51, 1941
Bse3DI	GCAATG	2 cut(s)	1117, 1456
BseBI	CCWGG	3 cut(s)	1316, 1492, 1521
BseDI	CCNNGG	3 cut(s)	810, 1407, 1520
BseGI	GGATG	7 cut(s)	364, 613, 869, 1130, 1637, 1714, 1743
BseLI	CCNNNNNNNGG	4 cut(s)	710, 879, 1321, 1648
BseMI	GCAATG	2 cut(s)	1117, 1456
BseMII	CTCAG	6 cut(s)	42, 1175, 1928, 1955, 2000, 2023
BseNI	ACTGG	4 cut(s)	884, 1369, 1686, 1985
BseRI	GAGGAG	4 cut(s)	28, 833, 1756, 1941
BseSI	GKGCMC	2 cut(s)	1599, 1896
BseXI	GCAGC	3 cut(s)	1127, 2014, 2017
BshFI	GGCC	1 cut(s)	1030
BshNI	GGYRCC	1 cut(s)	4
BsiHKAI	GWGCWC	2 cut(s)	831, 1896
BsiHKCI	CYCGRG	2 cut(s)	60, 421
BsiSI	CCGG	2 cut(s)	1024, 1735
BslFI	GGGAC	2 cut(s)	412, 1537
BslI	CCNNNNNNNGG	4 cut(s)	710, 879, 1321, 1648
BsmAI	GTCTC	5 cut(s)	952, 1516, 1540, 1738, 1989
BsmFI	GGGAC	2 cut(s)	412, 1537
BsmI	GAATGC	3 cut(s)	722, 1495, 1594
BsnI	GGCC	1 cut(s)	1030
Bso31I	GGTCTC	4 cut(s)	952, 1516, 1738, 1989
BsoBI	CYCGRG	2 cut(s)	60, 421
Bsp1286I	GDGCHC	4 cut(s)	831, 1416, 1599, 1896
Bsp1407I	TGTACA	1 cut(s)	1726
Bsp19I	CCATGG	1 cut(s)	810
BspACI	CCGC	5 cut(s)	8, 396, 1446, 1968, 1990
BspANI	GGCC	1 cut(s)	1030
BspCNI	CTCAG	6 cut(s)	43, 1176, 1927, 1954, 1999, 2022
BspLI	GGNNCC	7 cut(s)	6, 57, 210, 702, 1313, 1413, 1692
BspPI	GGATC	7 cut(s)	97, 203, 216, 1306, 1319, 1448, 1913
BspT107I	GGYRCC	1 cut(s)	4
BspTNI	GGTCTC	4 cut(s)	952, 1516, 1738, 1989
BsrBI	CCGCTC	1 cut(s)	396
BsrDI	GCAATG	2 cut(s)	1117, 1456
BsrGI	TGTACA	1 cut(s)	1726
BsrI	ACTGG	4 cut(s)	884, 1369, 1686, 1985
BssECI	CCNNGG	3 cut(s)	810, 1407, 1520
BssT1I	CCWWGG	2 cut(s)	810, 1407
Bst2UI	CCWGG	3 cut(s)	1316, 1492, 1521
Bst4CI	ACNGT	8 cut(s)	457, 509, 950, 1061, 1100, 1128, 1243, 1264
Bst6I	CTCTTC	3 cut(s)	528, 1001, 1250
BstAUI	TGTACA	1 cut(s)	1726
BstC8I	GCNNGC	2 cut(s)	1830, 1995
BstDEI	CTNAG	6 cut(s)	51, 1184, 1914, 1941, 1986, 2009
BstDSI	CCRYGG	1 cut(s)	810
BstENI	CCTNNNNNAGG	2 cut(s)	708, 1319
BstF5I	GGATG	7 cut(s)	364, 613, 869, 1130, 1637, 1714, 1743
BstH2I	RGCGCY	1 cut(s)	1735
BstHHI	GCGC	1 cut(s)	1734
BstMAI	GTCTC	5 cut(s)	952, 1516, 1540, 1738, 1989
BstMWI	GCNNNNNNNGC	6 cut(s)	36, 149, 1643, 1652, 1973, 1999
BstNI	CCWGG	3 cut(s)	1316, 1492, 1521
BstNSI	RCATGY	2 cut(s)	554, 1307
BstSCI	CCNGG	3 cut(s)	1314, 1490, 1519
BstSLI	GKGCMC	2 cut(s)	1599, 1896
BstV1I	GCAGC	3 cut(s)	1127, 2014, 2017
BstV2I	GAAGAC	2 cut(s)	546, 1101
BstX2I	RGATCY	5 cut(s)	89, 208, 1311, 1706, 1905
BstYI	RGATCY	5 cut(s)	89, 208, 1311, 1706, 1905
Bsu36I	CCTNAGG	2 cut(s)	51, 1941
BsuI	GTATCC	1 cut(s)	586
BsuRI	GGCC	1 cut(s)	1030
BtgI	CCRYGG	1 cut(s)	810
BtsCI	GGATG	7 cut(s)	364, 613, 869, 1130, 1637, 1714, 1743
BtsI	GCAGTG	1 cut(s)	1599
BtsIMutI	CAGTG	4 cut(s)	508, 877, 1599, 1679
Cac8I	GCNNGC	2 cut(s)	1830, 1995
CaiI	CAGNNNCTG	1 cut(s)	507
CfoI	GCGC	1 cut(s)	1734
Csp6I	GTAC	6 cut(s)	5, 453, 557, 807, 1611, 1727
CviAII	CATG	8 cut(s)	125, 551, 689, 728, 811, 1304, 1376, 1973
CviQI	GTAC	6 cut(s)	5, 453, 557, 807, 1611, 1727
DdeI	CTNAG	6 cut(s)	51, 1184, 1914, 1941, 1986, 2009
Eam1104I	CTCTTC	3 cut(s)	528, 1001, 1250
EarI	CTCTTC	3 cut(s)	528, 1001, 1250
Eco130I	CCWWGG	2 cut(s)	810, 1407
Eco24I	GRGCYC	1 cut(s)	1416
Eco31I	GGTCTC	4 cut(s)	952, 1516, 1738, 1989
Eco57I	CTGAAG	1 cut(s)	1343
Eco81I	CCTNAGG	2 cut(s)	51, 1941
Eco88I	CYCGRG	2 cut(s)	60, 421
EcoNI	CCTNNNNNAGG	2 cut(s)	708, 1319
EcoRII	CCWGG	3 cut(s)	1314, 1490, 1519
EcoT14I	CCWWGG	2 cut(s)	810, 1407
EcoT38I	GRGCYC	1 cut(s)	1416
ErhI	CCWWGG	2 cut(s)	810, 1407
FaeI	CATG	8 cut(s)	128, 554, 692, 731, 814, 1307, 1379, 1976
FaqI	GGGAC	2 cut(s)	412, 1537
FatI	CATG	8 cut(s)	124, 550, 688, 727, 810, 1303, 1375, 1972
FauI	CCCGC	1 cut(s)	389
FauNDI	CATATG	2 cut(s)	1070, 1723
FbaI	TGATCA	1 cut(s)	415
Fnu4HI	GCNGC	8 cut(s)	1116, 1447, 1968, 1991, 2003, 2006, 2016, 2019
FokI	GGATG	7 cut(s)	351, 620, 856, 1117, 1624, 1701, 1750
FriOI	GRGCYC	1 cut(s)	1416
Fsp4HI	GCNGC	8 cut(s)	1116, 1447, 1968, 1991, 2003, 2006, 2016, 2019
FspBI	CTAG	9 cut(s)	69, 78, 144, 186, 198, 572, 647, 1608, 1964
GlaI	GCGC	1 cut(s)	1733
GluI	GCNGC	8 cut(s)	1116, 1447, 1968, 1991, 2003, 2006, 2016, 2019
GsuI	CTGGAG	3 cut(s)	876, 901, 1533
HaeII	RGCGCY	1 cut(s)	1735
HaeIII	GGCC	1 cut(s)	1030
HapII	CCGG	2 cut(s)	1024, 1735
HhaI	GCGC	1 cut(s)	1734
Hin1II	CATG	8 cut(s)	128, 554, 692, 731, 814, 1307, 1379, 1976
Hin6I	GCGC	1 cut(s)	1732
HinP1I	GCGC	1 cut(s)	1732
HincII	GTYRAC	3 cut(s)	460, 1488, 1576
HindII	GTYRAC	3 cut(s)	460, 1488, 1576
HindIII	AAGCTT	2 cut(s)	1385, 1427
HinfI	GANTC	5 cut(s)	121, 352, 859, 1543, 1959
HpaI	GTTAAC	1 cut(s)	1488
HpaII	CCGG	2 cut(s)	1024, 1735
HphI	GGTGA	3 cut(s)	854, 1071, 1902
Hpy166II	GTNNAC	7 cut(s)	158, 460, 946, 1079, 1488, 1576, 1894
Hpy188I	TCNGA	8 cut(s)	351, 637, 685, 1045, 1337, 1362, 1762, 2012
Hpy188III	TCNNGA	9 cut(s)	69, 97, 668, 893, 1148, 1208, 1481, 1515, 1943
Hpy8I	GTNNAC	7 cut(s)	158, 460, 946, 1079, 1488, 1576, 1894
HpyCH4III	ACNGT	8 cut(s)	457, 509, 950, 1061, 1100, 1128, 1243, 1264
HpyCH4IV	ACGT	2 cut(s)	221, 1040
HpyF10VI	GCNNNNNNNGC	6 cut(s)	36, 149, 1643, 1652, 1973, 1999
HpyF3I	CTNAG	6 cut(s)	51, 1184, 1914, 1941, 1986, 2009
HpySE526I	ACGT	2 cut(s)	221, 1040
Hsp92II	CATG	8 cut(s)	128, 554, 692, 731, 814, 1307, 1379, 1976
HspAI	GCGC	1 cut(s)	1732
KpnI	GGTACC	1 cut(s)	8
Ksp22I	TGATCA	1 cut(s)	415
KspAI	GTTAAC	1 cut(s)	1488
LmnI	GCTCC	3 cut(s)	895, 1411, 1945
Lsp1109I	GCAGC	3 cut(s)	1127, 2014, 2017
LweI	GCATC	4 cut(s)	878, 1511, 1646, 1723
MaeI	CTAG	9 cut(s)	69, 78, 144, 186, 198, 572, 647, 1608, 1964
MaeII	ACGT	2 cut(s)	221, 1040
MaeIII	GTNAC	4 cut(s)	503, 965, 1055, 1276
MbiI	CCGCTC	1 cut(s)	396
MfeI	CAATTG	2 cut(s)	1119, 1617
MflI	RGATCY	5 cut(s)	89, 208, 1311, 1706, 1905
MhlI	GDGCHC	4 cut(s)	831, 1416, 1599, 1896
MlyI	GAGTC	1 cut(s)	1968
MmeI	TCCRAC	1 cut(s)	823
MroXI	GAANNNNTTC	2 cut(s)	484, 1935
MseI	TTAA	7 cut(s)	753, 1002, 1020, 1191, 1487, 1668, 1821
MspA1I	CMGCKG	1 cut(s)	1990
MspI	CCGG	2 cut(s)	1024, 1735
MspR9I	CCNGG	3 cut(s)	1316, 1492, 1521
MunI	CAATTG	2 cut(s)	1119, 1617
Mva1269I	GAATGC	3 cut(s)	722, 1495, 1594
MvaI	CCWGG	3 cut(s)	1316, 1492, 1521
MwoI	GCNNNNNNNGC	6 cut(s)	36, 149, 1643, 1652, 1973, 1999
NcoI	CCATGG	1 cut(s)	810
NdeI	CATATG	2 cut(s)	1070, 1723
NlaIII	CATG	8 cut(s)	128, 554, 692, 731, 814, 1307, 1379, 1976
NlaIV	GGNNCC	7 cut(s)	6, 57, 210, 702, 1313, 1413, 1692
NmuCI	GTSAC	1 cut(s)	503
NspI	RCATGY	2 cut(s)	554, 1307
PaeR7I	CTCGAG	1 cut(s)	60
PciI	ACATGT	2 cut(s)	550, 1303
PctI	GAATGC	3 cut(s)	722, 1495, 1594
PdmI	GAANNNNTTC	2 cut(s)	484, 1935
PfeI	GAWTC	4 cut(s)	121, 352, 859, 1543
PflFI	GACNNNGTC	1 cut(s)	1958
PflMI	CCANNNNNTGG	2 cut(s)	879, 1648
PkrI	GCNGC	8 cut(s)	1117, 1448, 1969, 1992, 2004, 2007, 2017, 2020
PleI	GAGTC	1 cut(s)	1967
PpsI	GAGTC	1 cut(s)	1967
PscI	ACATGT	2 cut(s)	550, 1303
Psp6I	CCWGG	3 cut(s)	1314, 1490, 1519
PspGI	CCWGG	3 cut(s)	1314, 1490, 1519
PspN4I	GGNNCC	7 cut(s)	6, 57, 210, 702, 1313, 1413, 1692
PspXI	VCTCGAGB	1 cut(s)	60
PstNI	CAGNNNCTG	1 cut(s)	507
PsuI	RGATCY	5 cut(s)	89, 208, 1311, 1706, 1905
PsyI	GACNNNGTC	1 cut(s)	1958
RsaI	GTAC	6 cut(s)	6, 454, 558, 808, 1612, 1728
RsaNI	GTAC	6 cut(s)	5, 453, 557, 807, 1611, 1727
SaqAI	TTAA	7 cut(s)	753, 1002, 1020, 1191, 1487, 1668, 1821
SatI	GCNGC	8 cut(s)	1116, 1447, 1968, 1991, 2003, 2006, 2016, 2019
ScaI	AGTACT	1 cut(s)	1612
SchI	GAGTC	1 cut(s)	1968
ScrFI	CCNGG	3 cut(s)	1316, 1492, 1521
SduI	GDGCHC	4 cut(s)	831, 1416, 1599, 1896
SfaNI	GCATC	4 cut(s)	878, 1511, 1646, 1723
Sfr274I	CTCGAG	1 cut(s)	60
SlaI	CTCGAG	1 cut(s)	60
SmlI	CTYRAG	2 cut(s)	60, 1479
SmoI	CTYRAG	2 cut(s)	60, 1479
SsiI	CCGC	5 cut(s)	8, 396, 1446, 1968, 1990
SspMI	CTAG	9 cut(s)	69, 78, 144, 186, 198, 572, 647, 1608, 1964
StyD4I	CCNGG	3 cut(s)	1314, 1490, 1519
StyI	CCWWGG	2 cut(s)	810, 1407
TaaI	ACNGT	8 cut(s)	457, 509, 950, 1061, 1100, 1128, 1243, 1264
TaiI	ACGT	2 cut(s)	224, 1043
TaqI	TCGA	3 cut(s)	61, 1147, 1852
TatI	WGTACW	3 cut(s)	556, 1610, 1726
TauI	GCSGC	3 cut(s)	1449, 1970, 1993
TfiI	GAWTC	4 cut(s)	121, 352, 859, 1543
Tru1I	TTAA	7 cut(s)	753, 1002, 1020, 1191, 1487, 1668, 1821
Tru9I	TTAA	7 cut(s)	753, 1002, 1020, 1191, 1487, 1668, 1821
TscAI	CASTG	4 cut(s)	508, 884, 1599, 1686
TseFI	GTSAC	1 cut(s)	503
TseI	GCWGC	5 cut(s)	1115, 2002, 2005, 2015, 2018
Tsp45I	GTSAC	1 cut(s)	503
TspDTI	ATGAA	6 cut(s)	113, 315, 716, 914, 1239, 1688
TspGWI	ACGGA	1 cut(s)	305
TspRI	CASTG	4 cut(s)	508, 884, 1599, 1686
Tth111I	GACNNNGTC	1 cut(s)	1958
Van91I	CCANNNNNTGG	2 cut(s)	879, 1648
VneI	GTGCAC	1 cut(s)	1892
XagI	CCTNNNNNAGG	2 cut(s)	708, 1319
XapI	RAATTY	5 cut(s)	377, 723, 781, 1012, 1224
XbaI	TCTAGA	1 cut(s)	68
XceI	RCATGY	2 cut(s)	554, 1307
XhoI	CTCGAG	1 cut(s)	60
XmnI	GAANNNNTTC	2 cut(s)	484, 1935
XspI	CTAG	9 cut(s)	69, 78, 144, 186, 198, 572, 647, 1608, 1964
ZrmI	AGTACT	1 cut(s)	1612

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.