Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0006046

Physical Location & Seq

Genomic Coordinates Forward (+)

8254957 .. 8262552

Gene Structure 7596 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g13600.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2376 bp

ATGGCGGTGCCAGCCGTCAGCTCCTGCGCAATCTTCCGCTCCGCCGCTTCTCCTACTCTCTTCGCCTTCCGCTGCTGCCCTTGCCACTTCCAATTCCGCCGCTTCTCCAACTTCGCTATCCGCTTCCCGCCGTCTTGGTCCGGCAAGCTCTCTCCCGGCCATGGCGCCGCTCAGACCAGCTCCGTCCACAGCCTCGTCGATTCTGTCATGGAAGAGCTCGAGTACTTGCGCTCAAGAAGACTCCGCGCCTCCGTCAAGGTGGTACTCACAAGCAATGGAGAGGTACTAGAGGATAAGCTTGTGAGCCGGACACTCCAAAAAGGGGTGCTGCTTGAGTTCAAGAAGGATGCTGAAAGAGTGTTGCTAGCCGTTGCTCAGAAGCCCGACGGCAAGAAGAACTGGATGGTGTCCGATCAGAATGGTGTTACATCATCCATCAAACCGCAACAAATTACATATATTGTTCCTGGTGTTGAAAATTTTGACCACGCAGAGATATCAGACTTTGTTCAGAAAGCTAAGGAAAACTTGGATCCAGCACTGTTAGAATTTGCTTGGGTTGAACTCCTTGAAAAGAATAAGCGGGTCAAGGTGGAAGAATTAGCAGAGATGATATTTGGTAGTGTGGAGTCCCTTGAATGCTACTGCGCTCATCTTTTGCTTTCAGAAGACGAAATATACTTCACTGTCCTGGAGACAAAAGGTTCTCGCTCTATATATGGACCTCGACCTGCTGAGCAGGTTGAGGAACTTCTACGTAGGAAGCTTGCAAAGGAGGCTGCTGAGAAAGAGCAGCAGGAGTTTGTAACCCTGCTGAAAGCTGCGAAGGCTATGCCTTTAGATGCTAAACCTCCCAAGTCTTCTTGGATGGTTGAAGAGAAAATCAAACACAGGATTGAGTCTCTTGAACGTTATGCTATTGATGACTGCAAAACCGATGACCAAAGGAAAACAGCTGGAACAATCCTAAAAGCAATGGGAATGGTGAAAACAGCATCATCAGCTCTGAATCTCCTCATCGACATTGGGTATTTCCCTGTACATGTGAATTTGGACTTATTGAAGTTCAACATTCATACGGATCATTCAGATGAAGTTATATCAGCTGCAGAAAGTCTTCTGTCTGATCCAACAGATCCAGATGAGATTGAAAGGAAAGATCTCACTCACTTGAAGGTCTATGCTATTGATGTGGATGAGGCTGATGAGCTTGATGATGCCTTAAGTGCAACGAGGCTGCAACATGGACGCATTAAAATATGGATTCATGTTGCAGACCCGACTAGGCTTGTTCAACCTGGGAGCATCCTAGACAGGGAGGCTATGAGAAGAGGAACTTCCGTCTTCTTGCCTACTGCTACTTATCCCATGTTCCCAGAAAAACTTGCCATGGAGGGAATGAGTTTGCAGCAAGGAGAGATTTGCAATGCTGTTACAGTTTCTGTTGTGCTGCACTCTGATGGCAGTATTGCAGAATATTCAGTGGACAGCTCCATCATTAGACCAACATATATGCTAACGTATGAAAGTGCATCTGAGCTTCTTCATTTGAACCTGGAAGAAGAGTCTGAACTGAAAATGTTGTCTGAGGCTGCAACTCTCCGAAGAAGATGGCGTCACGAACAGGGTGGCATTGATACTGCCACATTGGAAGCACGCATAAAAGTCGTGAATCCAGAGGATCCAGAACCTGTAATAAATCTCTATGTTGAGGACCAGGCTGACCCTGCAATGCGACTGGTCTCTGAGATGATGATACTCTGTGGAGAAGTTATAGCTACTTTTGGTTGTAGCAATAACATTCCTTTACCATACAGGGGACAGCCCCAATCCAACATTGACACATCTGTATTTGCCCATCTTCCAGAAGGACCTGTTAGAAGCTCTGCCCTTGTCAAAATAATGCGTGCTGCTGAAATAGATTTCAGGAAACCTCTACGCCATGGAATTTTAGGACTTCCTGGGTATGTTCAATTTACATCTCCCATCCGCAGATATCTGGATCTACTAGCTCATTATCAGATCAAAGCTTTTCTTATTGGAGATTCTCCTCCTTTCTCAGCTAGTCAGTTGGAAGGGATAGCGTCTATAGTGAACATGAATACTAGAGTAGCAAAGCGGCTCTTTAACAGCAGTCTGCGGTATTGGATATTAGAGTATCTGAGAAGGCAGCCAAAAGAAAAAAGATTCCGTGCATTGATTCTTAGATTCATTAAGGATCGCATTGCAGCCTTATTATTAGTTGAGGTGGGACTTCAAGCATCTGTGTGGGTGTCTGTGGGATCACAAATTGGAGATGAAGTTCTGGTTCGGGTAGATGAAGCTCATCCACGTGATGATGTGCTTTTTCTCAAAGAGGTGGTCATTGATAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000175 GO:0000178 GO:0000932 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006364 GO:0006396 GO:0006401 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008408 GO:0009056 GO:0009057 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016072 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019439 GO:0022613 GO:0032991 GO:0034470 GO:0034641 GO:0034655 GO:0034660 GO:0035770 GO:0036464 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575 GO:1902494 GO:1905354 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RNB

Protein Analysis

792

Amino Acids

88.94

Weight (kDa)

5.8

Isoelectric Point (pI)

46.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CSD_RNase_II	PF23163	105 - 166	6e-28	CSD-like barrel domain
WHD_RNase_II	PF25255	168 - 247	1.6e-30	Ribonuclease II, winged helix domain
HTH_RNase_II	PF23161	248 - 351	1.3e-28	Double HTH domain
RNB	PF00773	385 - 677	1.4e-75	RNB domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006046)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02250
fragaria_vesca	FvH4_6g13600 FvH4_6g13600 FvH4_6g13600 FvH4_6g13600 FvH4_6g13600 FvH4_6g13600 FvH4_6g13600
malus_domestica	MD04G1129900.v1.1 MD12G1143000.v1.1
prunus_persica	Prupe.6G256600_v2.0.a1 Prupe.6G256600_v2.0.a1 Prupe.6G256600_v2.0.a1 Prupe.6G256600_v2.0.a1 Prupe.6G256600_v2.0.a1
pyrus_communis	pycom04g11820
rosa_chinensis	RchiOBHm_Chr3g0466451
rosa_laevigata	RLG00000024573
rosa_multiflora	Rmu_sc0036233.1_g000001
rosa_roxburghii	Rroxscaffold_1G00002460 Rroxscaffold_6G00414460
rosa_rugosa	Rorug03G0082000
rosa_samantha	Rh3AG128500 Rh3BG149900 Rh3DG150600
rosa_wichuraiana	Rw3G012140 Rw3G012150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	28
Acc36I	ACCTGC	2 cut(s)	730, 739
AccB1I	GGYRCC	2 cut(s)	7, 164
AccBSI	CCGCTC	2 cut(s)	39, 170
AccII	CGCG	1 cut(s)	246
AclI	AACGTT	1 cut(s)	910
AcoI	YGGCCR	1 cut(s)	157
AcsI	RAATTY	4 cut(s)	478, 548, 1048, 1947
AcvI	CACGTG	1 cut(s)	2333
AcyI	GRCGYC	2 cut(s)	165, 1615
AfaI	GTAC	4 cut(s)	224, 264, 285, 1041
AfiI	CCNNNNNNNGG	4 cut(s)	161, 322, 1315, 1817
AflII	CTTAAG	1 cut(s)	1222
AflIII	ACRYGT	1 cut(s)	1042
AjnI	CCWGG	6 cut(s)	466, 690, 1297, 1554, 1716, 1960
AloI	GAACNNNNNNTCC	2 cut(s)	2286, 2318
Alw21I	GWGCWC	1 cut(s)	219
Alw26I	GTCTC	3 cut(s)	689, 906, 1747
AlwNI	CAGNNNCTG	3 cut(s)	24, 1442, 1691
Ama87I	CYCGRG	1 cut(s)	218
AoxI	GGCC	1 cut(s)	157
ApoI	RAATTY	4 cut(s)	478, 548, 1048, 1947
ArsI	GACNNNNNNTTYG	1 cut(s)	2346
Asp700I	GAANNNNTTC	1 cut(s)	1116
AspLEI	GCGC	5 cut(s)	29, 167, 231, 248, 650
AspS9I	GGNCC	4 cut(s)	138, 722, 1714, 1871
AsuC2I	CCSGG	1 cut(s)	156
AsuHPI	GGTGA	1 cut(s)	997
AsuNHI	GCTAGC	1 cut(s)	364
AvaI	CYCGRG	1 cut(s)	218
AvaII	GGWCC	4 cut(s)	138, 722, 1714, 1871
BamHI	GGATCC	2 cut(s)	532, 1681
BanI	GGYRCC	2 cut(s)	7, 164
BanII	GRGCYC	1 cut(s)	219
BbrPI	CACGTG	1 cut(s)	2333
BbsI	GAAGAC	5 cut(s)	244, 675, 852, 1109, 1336
Bbv12I	GWGCWC	1 cut(s)	219
BccI	CCATC	8 cut(s)	397, 443, 862, 1454, 1502, 1605, 1866, 1994
BceAI	ACGGC	3 cut(s)	115, 353, 403
BcgI	CGANNNNNNTGC	4 cut(s)	814, 848, 1648, 1682
BciT130I	CCWGG	6 cut(s)	468, 692, 1299, 1556, 1718, 1962
BcnI	CCSGG	1 cut(s)	156
BcoDI	GTCTC	3 cut(s)	689, 906, 1747
BfaI	CTAG	7 cut(s)	287, 365, 1284, 1310, 2009, 2064, 2106
BfmI	CTRYAG	2 cut(s)	1107, 2088
BfoI	RGCGCY	1 cut(s)	168
BfrI	CTTAAG	1 cut(s)	1222
BfuAI	ACCTGC	2 cut(s)	730, 739
BglII	AGATCT	1 cut(s)	1159
BlpI	GCTNAGC	1 cut(s)	735
BmcAI	AGTACT	1 cut(s)	224
Bme1390I	CCNGG	7 cut(s)	156, 468, 692, 1299, 1556, 1718, 1962
Bme18I	GGWCC	4 cut(s)	138, 722, 1714, 1871
BmeT110I	CYCGRG	1 cut(s)	218
BmgT120I	GGNCC	4 cut(s)	138, 722, 1714, 1871
BmiI	GGNNCC	4 cut(s)	9, 166, 534, 1683
BmrFI	CCNGG	7 cut(s)	156, 468, 692, 1299, 1556, 1718, 1962
BmsI	GCATC	7 cut(s)	337, 832, 1004, 1207, 1314, 1541, 2270
BmtI	GCTAGC	1 cut(s)	368
BpiI	GAAGAC	5 cut(s)	244, 675, 852, 1109, 1336
BpmI	CTGGAG	1 cut(s)	713
Bpu10I	CCTNAGC	1 cut(s)	519
Bpu1102I	GCTNAGC	1 cut(s)	735
BpuEI	CTTGAG	2 cut(s)	217, 353
BpuMI	CCSGG	1 cut(s)	156
BsaAI	YACGTR	2 cut(s)	758, 2333
BsaHI	GRCGYC	2 cut(s)	165, 1615
BsaI	GGTCTC	1 cut(s)	1747
BsaJI	CCNNGG	5 cut(s)	160, 1298, 1389, 1942, 1961
BsaXI	ACNNNNNCTCC	2 cut(s)	2286, 2316
Bsc4I	CCNNNNNNNGG	4 cut(s)	161, 322, 1315, 1817
Bse1I	ACTGG	2 cut(s)	404, 1743
Bse3DI	GCAATG	5 cut(s)	280, 981, 1432, 1737, 2223
BseBI	CCWGG	6 cut(s)	468, 692, 1299, 1556, 1718, 1962
BseDI	CCNNGG	5 cut(s)	160, 1298, 1389, 1942, 1961
BseGI	GGATG	8 cut(s)	352, 408, 431, 873, 1201, 1305, 1986, 2326
BseLI	CCNNNNNNNGG	4 cut(s)	161, 322, 1315, 1817
BseMI	GCAATG	5 cut(s)	280, 981, 1432, 1737, 2223
BseMII	CTCAG	9 cut(s)	185, 389, 726, 774, 1527, 1578, 1737, 2073, 2153
BseNI	ACTGG	2 cut(s)	404, 1743
BseRI	GAGGAG	2 cut(s)	1004, 2040
BsgI	GTGCAG	1 cut(s)	1436
Bsh1236I	CGCG	1 cut(s)	246
BshFI	GGCC	1 cut(s)	159
BshNI	GGYRCC	2 cut(s)	7, 164
BsiHKAI	GWGCWC	1 cut(s)	219
BsiHKCI	CYCGRG	1 cut(s)	218
BsiSI	CCGG	3 cut(s)	141, 156, 307
BslFI	GGGAC	3 cut(s)	616, 1833, 2265
BslI	CCNNNNNNNGG	4 cut(s)	161, 322, 1315, 1817
BsmAI	GTCTC	3 cut(s)	689, 906, 1747
BsmFI	GGGAC	3 cut(s)	616, 1833, 2265
BsmI	GAATGC	1 cut(s)	644
BsnI	GGCC	1 cut(s)	159
Bso31I	GGTCTC	1 cut(s)	1747
BsoBI	CYCGRG	1 cut(s)	218
Bsp1286I	GDGCHC	1 cut(s)	219
Bsp1407I	TGTACA	1 cut(s)	1039
Bsp1720I	GCTNAGC	1 cut(s)	735
Bsp19I	CCATGG	3 cut(s)	160, 1389, 1942
BspANI	GGCC	1 cut(s)	159
BspCNI	CTCAG	9 cut(s)	184, 388, 727, 775, 1528, 1579, 1738, 2072, 2154
BspFNI	CGCG	1 cut(s)	246
BspLI	GGNNCC	4 cut(s)	9, 166, 534, 1683
BspMAI	CTGCAG	1 cut(s)	1111
BspMI	ACCTGC	2 cut(s)	730, 739
BspOI	GCTAGC	1 cut(s)	368
BspQI	GCTCTTC	1 cut(s)	207
BspT107I	GGYRCC	2 cut(s)	7, 164
BspTI	CTTAAG	1 cut(s)	1222
BspTNI	GGTCTC	1 cut(s)	1747
BsrBI	CCGCTC	2 cut(s)	39, 170
BsrDI	GCAATG	5 cut(s)	280, 981, 1432, 1737, 2223
BsrGI	TGTACA	1 cut(s)	1039
BsrI	ACTGG	2 cut(s)	404, 1743
BssECI	CCNNGG	5 cut(s)	160, 1298, 1389, 1942, 1961
BssNI	GRCGYC	2 cut(s)	165, 1615
BssT1I	CCWWGG	3 cut(s)	160, 1389, 1942
Bst2UI	CCWGG	6 cut(s)	468, 692, 1299, 1556, 1718, 1962
Bst4CI	ACNGT	3 cut(s)	543, 688, 1438
Bst6I	CTCTTC	5 cut(s)	65, 207, 870, 1324, 1557
BstACI	GRCGYC	2 cut(s)	165, 1615
BstAFI	CTTAAG	1 cut(s)	1222
BstAUI	TGTACA	1 cut(s)	1039
BstBAI	YACGTR	2 cut(s)	758, 2333
BstC8I	GCNNGC	6 cut(s)	12, 146, 366, 768, 1657, 1908
BstDSI	CCRYGG	3 cut(s)	160, 1389, 1942
BstF5I	GGATG	8 cut(s)	352, 408, 431, 873, 1201, 1305, 1986, 2326
BstFNI	CGCG	1 cut(s)	246
BstH2I	RGCGCY	1 cut(s)	168
BstHHI	GCGC	5 cut(s)	29, 167, 231, 248, 650
BstMAI	GTCTC	3 cut(s)	689, 906, 1747
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 81, 776, 827, 1001, 1226, 1727
BstNI	CCWGG	6 cut(s)	468, 692, 1299, 1556, 1718, 1962
BstNSI	RCATGY	1 cut(s)	1046
BstSCI	CCNGG	7 cut(s)	154, 466, 690, 1297, 1554, 1716, 1960
BstSFI	CTRYAG	2 cut(s)	1107, 2088
BstSNI	TACGTA	1 cut(s)	758
BstUI	CGCG	1 cut(s)	246
BstV2I	GAAGAC	5 cut(s)	244, 675, 852, 1109, 1336
BstX2I	RGATCY	5 cut(s)	532, 1135, 1159, 1681, 2002
BstYI	RGATCY	5 cut(s)	532, 1135, 1159, 1681, 2002
BsuRI	GGCC	1 cut(s)	159
BtgI	CCRYGG	3 cut(s)	160, 1389, 1942
BtsCI	GGATG	8 cut(s)	352, 408, 431, 873, 1201, 1305, 1986, 2326
BtsIMutI	CAGTG	3 cut(s)	539, 684, 1488
BveI	ACCTGC	2 cut(s)	730, 739
Cac8I	GCNNGC	6 cut(s)	12, 146, 366, 768, 1657, 1908
CaiI	CAGNNNCTG	3 cut(s)	24, 1442, 1691
CfoI	GCGC	5 cut(s)	29, 167, 231, 248, 650
Cfr13I	GGNCC	4 cut(s)	138, 722, 1714, 1871
CseI	GACGC	3 cut(s)	1257, 1604, 2073
Csp6I	GTAC	4 cut(s)	223, 263, 284, 1040
CviAII	CATG	9 cut(s)	161, 208, 1043, 1244, 1268, 1369, 1390, 1943, 2098
CviQI	GTAC	4 cut(s)	223, 263, 284, 1040
DinI	GGCGCC	1 cut(s)	166
EaeI	YGGCCR	1 cut(s)	157
Eam1104I	CTCTTC	5 cut(s)	65, 207, 870, 1324, 1557
EarI	CTCTTC	5 cut(s)	65, 207, 870, 1324, 1557
EciI	GGCGGA	2 cut(s)	31, 86
Ecl136II	GAGCTC	1 cut(s)	217
Eco105I	TACGTA	1 cut(s)	758
Eco130I	CCWWGG	3 cut(s)	160, 1389, 1942
Eco24I	GRGCYC	1 cut(s)	219
Eco31I	GGTCTC	1 cut(s)	1747
Eco32I	GATATC	2 cut(s)	498, 1997
Eco47I	GGWCC	4 cut(s)	138, 722, 1714, 1871
Eco53kI	GAGCTC	1 cut(s)	217
Eco72I	CACGTG	1 cut(s)	2333
Eco88I	CYCGRG	1 cut(s)	218
EcoICRI	GAGCTC	1 cut(s)	217
EcoO109I	RGGNCCY	1 cut(s)	1871
EcoRII	CCWGG	6 cut(s)	466, 690, 1297, 1554, 1716, 1960
EcoRV	GATATC	2 cut(s)	498, 1997
EcoT14I	CCWWGG	3 cut(s)	160, 1389, 1942
EcoT38I	GRGCYC	1 cut(s)	219
EgeI	GGCGCC	1 cut(s)	166
EheI	GGCGCC	1 cut(s)	166
ErhI	CCWWGG	3 cut(s)	160, 1389, 1942
FaeI	CATG	9 cut(s)	164, 211, 1046, 1247, 1271, 1372, 1393, 1946, 2101
FalI	AAGNNNNNCTT	8 cut(s)	512, 544, 1321, 1353, 2019, 2051, 2108, 2140
FaqI	GGGAC	3 cut(s)	616, 1833, 2265
FatI	CATG	9 cut(s)	160, 207, 1042, 1243, 1267, 1368, 1389, 1942, 2097
FauI	CCCGC	2 cut(s)	135, 576
FokI	GGATG	8 cut(s)	359, 415, 418, 880, 1208, 1292, 1973, 2313
FriOI	GRGCYC	1 cut(s)	219
FspBI	CTAG	7 cut(s)	287, 365, 1284, 1310, 2009, 2064, 2106
FspI	TGCGCA	1 cut(s)	28
GlaI	GCGC	5 cut(s)	28, 166, 230, 247, 649
GsuI	CTGGAG	1 cut(s)	713
HaeII	RGCGCY	1 cut(s)	168
HaeIII	GGCC	1 cut(s)	159
HapII	CCGG	3 cut(s)	141, 156, 307
HgaI	GACGC	3 cut(s)	1257, 1604, 2073
HhaI	GCGC	5 cut(s)	29, 167, 231, 248, 650
Hin1I	GRCGYC	2 cut(s)	165, 1615
Hin1II	CATG	9 cut(s)	164, 211, 1046, 1247, 1271, 1372, 1393, 1946, 2101
Hin6I	GCGC	5 cut(s)	27, 165, 229, 246, 648
HinP1I	GCGC	5 cut(s)	27, 165, 229, 246, 648
HindIII	AAGCTT	3 cut(s)	296, 764, 2028
HpaII	CCGG	3 cut(s)	141, 156, 307
HphI	GGTGA	1 cut(s)	997
Hpy166II	GTNNAC	3 cut(s)	187, 1486, 2095
Hpy8I	GTNNAC	3 cut(s)	187, 1486, 2095
Hpy99I	CGWCG	2 cut(s)	200, 389
HpyAV	CCTTC	7 cut(s)	76, 337, 820, 1168, 1862, 2069, 2160
HpyCH4III	ACNGT	3 cut(s)	543, 688, 1438
HpyCH4IV	ACGT	4 cut(s)	757, 910, 1520, 2332
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 81, 776, 827, 1001, 1226, 1727
HpySE526I	ACGT	4 cut(s)	757, 910, 1520, 2332
Hsp92I	GRCGYC	2 cut(s)	165, 1615
Hsp92II	CATG	9 cut(s)	164, 211, 1046, 1247, 1271, 1372, 1393, 1946, 2101
HspAI	GCGC	5 cut(s)	27, 165, 229, 246, 648
KasI	GGCGCC	1 cut(s)	164
LguI	GCTCTTC	1 cut(s)	207
LmnI	GCTCC	5 cut(s)	26, 44, 185, 1302, 1496
LweI	GCATC	7 cut(s)	337, 832, 1004, 1207, 1314, 1541, 2270
MaeI	CTAG	7 cut(s)	287, 365, 1284, 1310, 2009, 2064, 2106
MaeII	ACGT	4 cut(s)	757, 910, 1520, 2332
MaeIII	GTNAC	4 cut(s)	424, 805, 1432, 1616
MbiI	CCGCTC	2 cut(s)	39, 170
MflI	RGATCY	5 cut(s)	532, 1135, 1159, 1681, 2002
MhlI	GDGCHC	1 cut(s)	219
MluCI	AATT	9 cut(s)	92, 450, 478, 548, 599, 1048, 1947, 1973, 2289
Mly113I	GGCGCC	1 cut(s)	165
MlyI	GAGTC	4 cut(s)	234, 638, 908, 1574
MmeI	TCCRAC	4 cut(s)	132, 1154, 1857, 2052
MroXI	GAANNNNTTC	1 cut(s)	1116
MseI	TTAA	4 cut(s)	1223, 1254, 2127, 2214
MslI	CAYNNNNRTG	4 cut(s)	1089, 1458, 2266, 2331
MspA1I	CMGCKG	3 cut(s)	72, 956, 1106
MspCI	CTTAAG	1 cut(s)	1222
MspI	CCGG	3 cut(s)	141, 156, 307
MspR9I	CCNGG	7 cut(s)	156, 468, 692, 1299, 1556, 1718, 1962
Mva1269I	GAATGC	1 cut(s)	644
MvaI	CCWGG	6 cut(s)	468, 692, 1299, 1556, 1718, 1962
MvnI	CGCG	1 cut(s)	246
MwoI	GCNNNNNNNGC	7 cut(s)	11, 81, 776, 827, 1001, 1226, 1727
NarI	GGCGCC	1 cut(s)	165
NciI	CCSGG	1 cut(s)	156
NcoI	CCATGG	3 cut(s)	160, 1389, 1942
NheI	GCTAGC	1 cut(s)	364
NlaIII	CATG	9 cut(s)	164, 211, 1046, 1247, 1271, 1372, 1393, 1946, 2101
NlaIV	GGNNCC	4 cut(s)	9, 166, 534, 1683
NmuCI	GTSAC	1 cut(s)	1616
NsbI	TGCGCA	1 cut(s)	28
NspI	RCATGY	1 cut(s)	1046
PaeR7I	CTCGAG	1 cut(s)	218
PciI	ACATGT	1 cut(s)	1042
PciSI	GCTCTTC	1 cut(s)	207
PctI	GAATGC	1 cut(s)	644
PdmI	GAANNNNTTC	1 cut(s)	1116
PfeI	GAWTC	8 cut(s)	200, 1009, 1264, 1672, 2045, 2187, 2200, 2208
PfoI	TCCNGGA	1 cut(s)	690
PleI	GAGTC	4 cut(s)	234, 637, 907, 1573
PluTI	GGCGCC	1 cut(s)	168
PmaCI	CACGTG	1 cut(s)	2333
PmlI	CACGTG	1 cut(s)	2333
PpsI	GAGTC	4 cut(s)	234, 637, 907, 1573
Ppu21I	YACGTR	2 cut(s)	758, 2333
PpuMI	RGGWCCY	1 cut(s)	1871
PscI	ACATGT	1 cut(s)	1042
Psp124BI	GAGCTC	1 cut(s)	219
Psp1406I	AACGTT	1 cut(s)	910
Psp5II	RGGWCCY	1 cut(s)	1871
Psp6I	CCWGG	6 cut(s)	466, 690, 1297, 1554, 1716, 1960
PspCI	CACGTG	1 cut(s)	2333
PspGI	CCWGG	6 cut(s)	466, 690, 1297, 1554, 1716, 1960
PspN4I	GGNNCC	4 cut(s)	9, 166, 534, 1683
PspPI	GGNCC	4 cut(s)	138, 722, 1714, 1871
PspPPI	RGGWCCY	1 cut(s)	1871
PspXI	VCTCGAGB	1 cut(s)	218
PstI	CTGCAG	1 cut(s)	1111
PstNI	CAGNNNCTG	3 cut(s)	24, 1442, 1691
PsuI	RGATCY	5 cut(s)	532, 1135, 1159, 1681, 2002
PvuII	CAGCTG	2 cut(s)	956, 1106
RsaI	GTAC	4 cut(s)	224, 264, 285, 1041
RsaNI	GTAC	4 cut(s)	223, 263, 284, 1040
RseI	CAYNNNNRTG	4 cut(s)	1089, 1458, 2266, 2331
SacI	GAGCTC	1 cut(s)	219
SapI	GCTCTTC	1 cut(s)	207
SaqAI	TTAA	4 cut(s)	1223, 1254, 2127, 2214
Sau96I	GGNCC	4 cut(s)	138, 722, 1714, 1871
ScaI	AGTACT	1 cut(s)	224
SchI	GAGTC	4 cut(s)	234, 638, 908, 1574
ScrFI	CCNGG	7 cut(s)	156, 468, 692, 1299, 1556, 1718, 1962
SduI	GDGCHC	1 cut(s)	219
SfaNI	GCATC	7 cut(s)	337, 832, 1004, 1207, 1314, 1541, 2270
SfcI	CTRYAG	2 cut(s)	1107, 2088
SfoI	GGCGCC	1 cut(s)	166
Sfr274I	CTCGAG	1 cut(s)	218
SinI	GGWCC	4 cut(s)	138, 722, 1714, 1871
SlaI	CTCGAG	1 cut(s)	218
SmiMI	CAYNNNNRTG	4 cut(s)	1089, 1458, 2266, 2331
SmlI	CTYRAG	4 cut(s)	218, 232, 332, 1222
SmoI	CTYRAG	4 cut(s)	218, 232, 332, 1222
SnaBI	TACGTA	1 cut(s)	758
Sse9I	AATT	9 cut(s)	92, 450, 478, 548, 599, 1048, 1947, 1973, 2289
SspDI	GGCGCC	1 cut(s)	164
SspI	AATATT	1 cut(s)	1478
SspMI	CTAG	7 cut(s)	287, 365, 1284, 1310, 2009, 2064, 2106
SstI	GAGCTC	1 cut(s)	219
StyD4I	CCNGG	7 cut(s)	154, 466, 690, 1297, 1554, 1716, 1960
StyI	CCWWGG	3 cut(s)	160, 1389, 1942
TaaI	ACNGT	3 cut(s)	543, 688, 1438
TaiI	ACGT	4 cut(s)	760, 913, 1523, 2335
TaqI	TCGA	4 cut(s)	198, 219, 727, 1020
TasI	AATT	9 cut(s)	92, 450, 478, 548, 599, 1048, 1947, 1973, 2289
TatI	WGTACW	2 cut(s)	222, 1039
TauI	GCSGC	4 cut(s)	47, 102, 170, 2122
TfiI	GAWTC	8 cut(s)	200, 1009, 1264, 1672, 2045, 2187, 2200, 2208
Tru1I	TTAA	4 cut(s)	1223, 1254, 2127, 2214
Tru9I	TTAA	4 cut(s)	1223, 1254, 2127, 2214
TscAI	CASTG	3 cut(s)	546, 691, 1488
TseFI	GTSAC	1 cut(s)	1616
Tsp45I	GTSAC	1 cut(s)	1616
TspDTI	ATGAA	9 cut(s)	1064, 1107, 1256, 1535, 1539, 2114, 2200, 2313, 2334
TspGWI	ACGGA	5 cut(s)	172, 241, 1094, 1330, 2180
TspRI	CASTG	3 cut(s)	546, 691, 1488
Vha464I	CTTAAG	1 cut(s)	1222
VpaK11BI	GGWCC	4 cut(s)	138, 722, 1714, 1871
XapI	RAATTY	4 cut(s)	478, 548, 1048, 1947
XceI	RCATGY	1 cut(s)	1046
XhoI	CTCGAG	1 cut(s)	218
XmnI	GAANNNNTTC	1 cut(s)	1116
XspI	CTAG	7 cut(s)	287, 365, 1284, 1310, 2009, 2064, 2106
ZrmI	AGTACT	1 cut(s)	224

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.