Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0000492

Physical Location & Seq

Genomic Coordinates Reverse (-)

6382716 .. 6387368

Gene Structure 4653 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0082000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1239 bp

ATGGCTTCTGTGGGTGTGGCACCTACATCAGGTTTGAGAGAACCAAGTGGTCATGCTGTTGGCGTGGATAAGTTGCCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAAGAAATGGAAGCTACTGTTACAGTTGTTGATGGTAATGGAACCGAGACGGGCCATATAATTGTGACAACAATTGGTGGTAGAAATGGTCAGCCAAAGCAGACAATTAGTTACATGGCTGAGCGTGTTGTCGGGCATGGATCATTTGGAGTTGTGTTCCAAGCAAAGTGCTTAGAGACTGGTGAAACTGTTGCTATAAAGAAGGTTCTGCAAGACAAGAGGTACAAAAACCGTGAGCTGCAAACCATGCGTCTGCTTGACCACCCAAATGTTGTATCTTTGAAGCATTGCTTCTTTTCAACAACTGAAAAGGATGAACTTTATCTCAACCTGGTACTTGAGTATGTTCCTGAAACAGTTCATCGTGTGATTAAACACTACAACAAGTTGAACCAACGGATGCCCCTCATATATGTTAAGCTCTACACGTACCAGATCTTTAGGGCATTATCCTACATTCACCGCTGCATTGGTGTGTGTCATCGGGACATTAAGCCTCAAAACCTTCTGGTGAATCCACATACCCACCAAGTAAAGTTGTGCGACTTTGGAAGTGCAAAAGTTTTGGTAAAAGGAGAGCCAAATATATCTTACATCTGCTCTAGATATTATAGAGCACCAGAACTCATATTTGGAGCAACTGAGTATACCACAGCTATTGACGTCTGGTCTGTTGGATGTGTTCTTGCTGAGCTATTGCTTGGACAGCCGTTGTTTCCTGGTGAGAGTGGAGTCGACCAGCTTGTTGAGATTATCAAGGTATTGGGCACTCCAACAAGGGAGGAAATCAAATGCATGAACCCTAACTATACGGAGTTCAAATTCCCTCAAATTAAAGCTCACCCATGGCACAAGATTTTCCACAAGCGTATGCCTCCAGAAGCTGTTGACCTGGTTTCAAGACTATTGCAATACTCTCCTAACTTGCGGTGCACAGCTCTGGATGCCTTGACCCATCCCTTTTTCGATGAACTTCGTGACTTGAACACCCGCCTGCCAAATGGACGTTTCCTTCCACCTTTGTTCAACTTTAAATCTCATGAATTGAAGGGGGTCCCTGCTGAGATTTTGATGAAATTGGTCCCAGAGCATGCAAGAAAGCAAGTCCCATTCTTTGCGTCCGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000175 GO:0000178 GO:0000932 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006364 GO:0006396 GO:0006401 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008408 GO:0009056 GO:0009057 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016072 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019439 GO:0022613 GO:0032991 GO:0034470 GO:0034641 GO:0034655 GO:0034660 GO:0035770 GO:0036464 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575 GO:1902494 GO:1905354 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RNB

Protein Analysis

412

Amino Acids

46.78

Weight (kDa)

8.58

Isoelectric Point (pI)

35.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	76 - 359	2.7e-62	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	78 - 277	1e-24	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000492)

Species	Orthologous Gene IDs
arabidopsis_thaliana	ATMG01250
fragaria_vesca	FvH4_1g20711 FvH4_3g24611 FvH4_3g24611 FvH4_3g24611 FvH4_3g24611 FvH4_3g24611 FvH4_3g24611 FvH4_3g24611 FvH4_3g24611 FvH4_3g24611 FvH4_3g24611 FvH4_3g24611 FvH4_3g28252 FvH4_3g31041 FvH4_4g00611 FvH4_5g15581 FvH4_5g21911 FvH4_5g35851 FvH4_6g24331 FvH4_6g34741
malus_domestica	MD07G1291800.v1.1 MD09G1222500.v1.1
prunus_persica	Prupe.1G162400_v2.0.a1 Prupe.1G210400_v2.0.a1 Prupe.6G308200_v2.0.a1
pyrus_communis	pycom05g02580 pycom12g09210 pycom12g15310 pycom16g09140
rosa_chinensis	RchiOBHm_Chr3g0484711 RchiOBHm_Chr4g0393411 RchiOBHm_Chr4g0397521 RchiOBHm_Chr4g0404571 RchiOBHm_Chr4g0418351 RchiOBHm_Chr5g0060311 RchiOBHm_Chr6g0301391 RchiOBHm_Chr7g0229871
rosa_laevigata	RLG00000007836 RLG00000025145
rosa_multiflora	Rmu_co8327795.1_g000001 Rmu_sc0000469.1_g000005 Rmu_sc0000498.1_g000050 Rmu_sc0000558.1_g000007 Rmu_sc0000693.1_g000082 Rmu_sc0000711.1_g000011 Rmu_sc0000814.1_g000039 Rmu_sc0001366.1_g000005 Rmu_sc0002205.1_g000004 Rmu_sc0002283.1_g000086 Rmu_sc0002406.1_g000011 Rmu_sc0002735.1_g000022 Rmu_sc0003545.1_g000004 Rmu_sc0004406.1_g000009 Rmu_sc0006301.1_g000009 Rmu_sc0006754.1_g000004 Rmu_sc0007324.1_g000010 Rmu_sc0008199.1_g000002 Rmu_sc0008563.1_g000009 Rmu_sc0009777.1_g000007 Rmu_sc0010560.1_g000011 Rmu_sc0011095.1_g000004 Rmu_sc0012101.1_g000004 Rmu_sc0014150.1_g000009 Rmu_sc0020270.1_g000004 Rmu_sc0021327.1_g000001 Rmu_sc0031326.1_g000003 Rmu_ssc0000116.1_g000050 Rmu_ssc0000368.1_g000056
rosa_roxburghii	Rroxscaffold_2G00110080 Rroxscaffold_2G00141700 Rroxscaffold_2G00142400
rosa_rugosa	Rorug01G0104400 Rorug01G0204500 Rorug02G0225600 Rorug02G0262000.1 Rorug02G0526700 Rorug03G0082000 Rorug03G0102500.1 Rorug04G0106400 Rorug04G0200200 Rorug05G0021900.1 Rorug05G0240000 Rorug05G0326500 Rorug05G0529200 Rorug07G0136100
rosa_samantha	Rh1AG352100 Rh6DG494100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	777
AccB1I	GGYRCC	1 cut(s)	19
AccI	GTMKAC	2 cut(s)	758, 846
AciI	CCGC	3 cut(s)	574, 1039, 1102
AclWI	GGATC	1 cut(s)	259
AcsI	RAATTY	1 cut(s)	932
AcyI	GRCGYC	1 cut(s)	774
AfaI	GTAC	3 cut(s)	335, 447, 542
AfiI	CCNNNNNNNGG	1 cut(s)	29
AflIII	ACRYGT	1 cut(s)	537
AgsI	TTSAA	8 cut(s)	394, 411, 502, 931, 1011, 1096, 1138, 1159
AhdI	GACNNNNNGTC	1 cut(s)	778
AjnI	CCWGG	3 cut(s)	441, 829, 1002
AjuI	GAANNNNNNNTTGG	2 cut(s)	726, 758
AluBI	AGCT	9 cut(s)	125, 349, 532, 767, 805, 853, 950, 995, 1049
AluI	AGCT	9 cut(s)	125, 349, 532, 767, 805, 853, 950, 995, 1049
Alw21I	GWGCWC	2 cut(s)	730, 1046
Alw26I	GTCTC	2 cut(s)	152, 281
Alw44I	GTGCAC	1 cut(s)	1042
AlwI	GGATC	1 cut(s)	259
AlwNI	CAGNNNCTG	1 cut(s)	995
Ama87I	CYCGRG	1 cut(s)	77
AoxI	GGCC	1 cut(s)	163
ApaLI	GTGCAC	1 cut(s)	1042
ApeKI	GCWGC	2 cut(s)	349, 576
ApoI	RAATTY	1 cut(s)	932
ArsI	GACNNNNNNTTYG	2 cut(s)	346, 378
Asp700I	GAANNNNTTC	1 cut(s)	468
AspS9I	GGNCC	3 cut(s)	163, 1165, 1192
AsuHPI	GGTGA	5 cut(s)	305, 563, 634, 845, 944
AvaI	CYCGRG	1 cut(s)	77
AvaII	GGWCC	2 cut(s)	1165, 1192
BaeGI	GKGCMC	2 cut(s)	881, 1046
BaeI	ACNNNNGTAYC	2 cut(s)	437, 470
BanI	GGYRCC	1 cut(s)	19
Bbv12I	GWGCWC	2 cut(s)	730, 1046
BbvI	GCAGC	2 cut(s)	336, 563
BccI	CCATC	2 cut(s)	137, 1074
BceAI	ACGGC	1 cut(s)	805
BciT130I	CCWGG	3 cut(s)	443, 831, 1004
BcoDI	GTCTC	2 cut(s)	152, 281
BfaI	CTAG	2 cut(s)	714, 1237
BglII	AGATCT	1 cut(s)	546
BisI	GCNGC	2 cut(s)	350, 577
BlpI	GCTNAGC	2 cut(s)	231, 801
BlsI	GCNGC	2 cut(s)	351, 578
Bme1390I	CCNGG	3 cut(s)	443, 831, 1004
Bme18I	GGWCC	2 cut(s)	1165, 1192
BmeRI	GACNNNNNGTC	1 cut(s)	778
BmeT110I	CYCGRG	1 cut(s)	77
BmgT120I	GGNCC	3 cut(s)	163, 1165, 1192
BmiI	GGNNCC	5 cut(s)	21, 154, 1166, 1167, 1194
BmrFI	CCNGG	3 cut(s)	443, 831, 1004
BmsI	GCATC	2 cut(s)	501, 1045
BpmI	CTGGAG	1 cut(s)	972
Bpu1102I	GCTNAGC	2 cut(s)	231, 801
BpuEI	CTTGAG	1 cut(s)	470
BsaAI	YACGTR	1 cut(s)	540
BsaHI	GRCGYC	1 cut(s)	774
BsaJI	CCNNGG	2 cut(s)	78, 956
Bsc4I	CCNNNNNNNGG	1 cut(s)	29
Bse1I	ACTGG	1 cut(s)	295
Bse3DI	GCAATG	1 cut(s)	397
BseBI	CCWGG	3 cut(s)	443, 831, 1004
BseDI	CCNNGG	2 cut(s)	78, 956
BseGI	GGATG	6 cut(s)	112, 430, 516, 794, 1060, 1066
BseLI	CCNNNNNNNGG	1 cut(s)	29
BseMI	GCAATG	1 cut(s)	397
BseMII	CTCAG	4 cut(s)	222, 744, 792, 1164
BseNI	ACTGG	1 cut(s)	295
BseRI	GAGGAG	1 cut(s)	95
BseSI	GKGCMC	2 cut(s)	881, 1046
BseXI	GCAGC	2 cut(s)	336, 563
BshFI	GGCC	1 cut(s)	165
BshNI	GGYRCC	1 cut(s)	19
BsiHKAI	GWGCWC	2 cut(s)	730, 1046
BsiHKCI	CYCGRG	1 cut(s)	77
BslFI	GGGAC	4 cut(s)	611, 1151, 1178, 1202
BslI	CCNNNNNNNGG	1 cut(s)	29
BsmAI	GTCTC	2 cut(s)	152, 281
BsmBI	CGTCTC	1 cut(s)	152
BsmFI	GGGAC	4 cut(s)	611, 1151, 1178, 1202
BsnI	GGCC	1 cut(s)	165
BsoBI	CYCGRG	1 cut(s)	77
Bsp1286I	GDGCHC	3 cut(s)	730, 881, 1046
Bsp143I	GATC	2 cut(s)	251, 546
Bsp1720I	GCTNAGC	2 cut(s)	231, 801
Bsp19I	CCATGG	1 cut(s)	956
BspACI	CCGC	3 cut(s)	574, 1039, 1102
BspANI	GGCC	1 cut(s)	165
BspCNI	CTCAG	4 cut(s)	223, 745, 793, 1165
BspHI	TCATGA	1 cut(s)	1150
BspLI	GGNNCC	5 cut(s)	21, 154, 1166, 1167, 1194
BspPI	GGATC	1 cut(s)	259
BspT107I	GGYRCC	1 cut(s)	19
BsrDI	GCAATG	1 cut(s)	397
BsrI	ACTGG	1 cut(s)	295
BssECI	CCNNGG	2 cut(s)	78, 956
BssMI	GATC	2 cut(s)	251, 546
BssNAI	GTATAC	1 cut(s)	759
BssNI	GRCGYC	1 cut(s)	774
BssT1I	CCWWGG	1 cut(s)	956
Bst1107I	GTATAC	1 cut(s)	759
Bst2UI	CCWGG	3 cut(s)	443, 831, 1004
Bst4CI	ACNGT	5 cut(s)	130, 136, 301, 344, 469
BstACI	GRCGYC	1 cut(s)	774
BstAPI	GCANNNNNTGC	1 cut(s)	358
BstBAI	YACGTR	1 cut(s)	540
BstC8I	GCNNGC	2 cut(s)	1106, 1203
BstDEI	CTNAG	5 cut(s)	231, 283, 753, 801, 1173
BstDSI	CCRYGG	1 cut(s)	956
BstENI	CCTNNNNNAGG	1 cut(s)	27
BstF5I	GGATG	6 cut(s)	112, 430, 516, 794, 1060, 1066
BstKTI	GATC	2 cut(s)	254, 549
BstMAI	GTCTC	2 cut(s)	152, 281
BstMBI	GATC	2 cut(s)	251, 546
BstMWI	GCNNNNNNNGC	3 cut(s)	358, 817, 1055
BstNI	CCWGG	3 cut(s)	443, 831, 1004
BstNSI	RCATGY	1 cut(s)	1205
BstSCI	CCNGG	3 cut(s)	441, 829, 1002
BstSLI	GKGCMC	2 cut(s)	881, 1046
BstV1I	GCAGC	2 cut(s)	336, 563
BstX2I	RGATCY	1 cut(s)	546
BstYI	RGATCY	1 cut(s)	546
BstZ17I	GTATAC	1 cut(s)	759
BsuRI	GGCC	1 cut(s)	165
BtgI	CCRYGG	1 cut(s)	956
BtsCI	GGATG	6 cut(s)	112, 430, 516, 794, 1060, 1066
Cac8I	GCNNGC	2 cut(s)	1106, 1203
CaiI	CAGNNNCTG	1 cut(s)	995
CciI	TCATGA	1 cut(s)	1150
Cfr13I	GGNCC	3 cut(s)	163, 1165, 1192
CseI	GACGC	2 cut(s)	350, 1218
CsiI	ACCWGGT	2 cut(s)	441, 1002
Csp6I	GTAC	3 cut(s)	334, 446, 541
CspCI	CAANNNNNGTGG	2 cut(s)	751, 786
CviAII	CATG	9 cut(s)	53, 94, 226, 248, 358, 907, 957, 1151, 1202
CviQI	GTAC	3 cut(s)	334, 446, 541
DdeI	CTNAG	5 cut(s)	231, 283, 753, 801, 1173
DpnI	GATC	2 cut(s)	253, 548
DpnII	GATC	2 cut(s)	251, 546
DraI	TTTAAA	1 cut(s)	1144
DriI	GACNNNNNGTC	1 cut(s)	778
Eam1105I	GACNNNNNGTC	1 cut(s)	778
Eco130I	CCWWGG	1 cut(s)	956
Eco47I	GGWCC	2 cut(s)	1165, 1192
Eco88I	CYCGRG	1 cut(s)	77
EcoNI	CCTNNNNNAGG	1 cut(s)	27
EcoO109I	RGGNCCY	1 cut(s)	1165
EcoRII	CCWGG	3 cut(s)	441, 829, 1002
EcoT14I	CCWWGG	1 cut(s)	956
EcoT22I	ATGCAT	1 cut(s)	908
ErhI	CCWWGG	1 cut(s)	956
Esp3I	CGTCTC	1 cut(s)	152
FaeI	CATG	9 cut(s)	56, 97, 229, 251, 361, 910, 960, 1154, 1205
FalI	AAGNNNNNCTT	2 cut(s)	386, 418
FaqI	GGGAC	4 cut(s)	611, 1151, 1178, 1202
FatI	CATG	9 cut(s)	52, 93, 225, 247, 357, 906, 956, 1150, 1201
FauI	CCCGC	1 cut(s)	1109
FblI	GTMKAC	2 cut(s)	758, 846
Fnu4HI	GCNGC	2 cut(s)	350, 577
FokI	GGATG	6 cut(s)	119, 437, 523, 801, 1053, 1067
Fsp4HI	GCNGC	2 cut(s)	350, 577
FspBI	CTAG	2 cut(s)	714, 1237
GluI	GCNGC	2 cut(s)	350, 577
GsuI	CTGGAG	1 cut(s)	972
HaeIII	GGCC	1 cut(s)	165
HgaI	GACGC	2 cut(s)	350, 1218
Hin1I	GRCGYC	1 cut(s)	774
Hin1II	CATG	9 cut(s)	56, 97, 229, 251, 361, 910, 960, 1154, 1205
HincII	GTYRAC	2 cut(s)	847, 1000
HindII	GTYRAC	2 cut(s)	847, 1000
HinfI	GANTC	2 cut(s)	625, 843
HphI	GGTGA	5 cut(s)	305, 563, 634, 845, 944
Hpy166II	GTNNAC	4 cut(s)	759, 847, 1000, 1044
Hpy188I	TCNGA	1 cut(s)	1234
Hpy188III	TCNNGA	8 cut(s)	461, 596, 714, 989, 1011, 1052, 1088, 1151
Hpy8I	GTNNAC	4 cut(s)	759, 847, 1000, 1044
HpyAV	CCTTC	4 cut(s)	307, 626, 1133, 1153
HpyCH4III	ACNGT	5 cut(s)	130, 136, 301, 344, 469
HpyCH4IV	ACGT	3 cut(s)	539, 774, 1117
HpyCH4V	TGCA	8 cut(s)	322, 352, 579, 668, 906, 1021, 1044, 1205
HpyF10VI	GCNNNNNNNGC	3 cut(s)	358, 817, 1055
HpyF3I	CTNAG	5 cut(s)	231, 283, 753, 801, 1173
HpySE526I	ACGT	3 cut(s)	539, 774, 1117
Hsp92I	GRCGYC	1 cut(s)	774
Hsp92II	CATG	9 cut(s)	56, 97, 229, 251, 361, 910, 960, 1154, 1205
KflI	GGGWCCC	1 cut(s)	1165
Kzo9I	GATC	2 cut(s)	251, 546
LmnI	GCTCC	1 cut(s)	746
Lsp1109I	GCAGC	2 cut(s)	336, 563
LweI	GCATC	2 cut(s)	501, 1045
MabI	ACCWGGT	2 cut(s)	441, 1002
MaeI	CTAG	2 cut(s)	714, 1237
MaeII	ACGT	3 cut(s)	539, 774, 1117
MaeIII	GTNAC	4 cut(s)	130, 175, 221, 1088
MalI	GATC	2 cut(s)	253, 548
MboI	GATC	2 cut(s)	251, 546
MfeI	CAATTG	1 cut(s)	183
MflI	RGATCY	1 cut(s)	546
MhlI	GDGCHC	3 cut(s)	730, 881, 1046
MluCI	AATT	8 cut(s)	99, 171, 183, 216, 932, 942, 1154, 1187
MlyI	GAGTC	1 cut(s)	852
MmeI	TCCRAC	2 cut(s)	766, 908
MnlI	CCTC	7 cut(s)	73, 324, 527, 618, 886, 948, 996
Mph1103I	ATGCAT	1 cut(s)	908
MroXI	GAANNNNTTC	1 cut(s)	468
MseI	TTAA	5 cut(s)	483, 528, 603, 945, 1143
MslI	CAYNNNNRTG	2 cut(s)	378, 584
MspA1I	CMGCKG	1 cut(s)	576
MspR9I	CCNGG	3 cut(s)	443, 831, 1004
MunI	CAATTG	1 cut(s)	183
MvaI	CCWGG	3 cut(s)	443, 831, 1004
MwoI	GCNNNNNNNGC	3 cut(s)	358, 817, 1055
NcoI	CCATGG	1 cut(s)	956
NdeII	GATC	2 cut(s)	251, 546
NlaIII	CATG	9 cut(s)	56, 97, 229, 251, 361, 910, 960, 1154, 1205
NlaIV	GGNNCC	5 cut(s)	21, 154, 1166, 1167, 1194
NmuCI	GTSAC	2 cut(s)	175, 1088
NsiI	ATGCAT	1 cut(s)	908
NspI	RCATGY	1 cut(s)	1205
PaeI	GCATGC	1 cut(s)	1205
PagI	TCATGA	1 cut(s)	1150
PdmI	GAANNNNTTC	1 cut(s)	468
PfeI	GAWTC	1 cut(s)	625
PkrI	GCNGC	2 cut(s)	351, 578
PleI	GAGTC	1 cut(s)	851
PpsI	GAGTC	1 cut(s)	851
Ppu21I	YACGTR	1 cut(s)	540
PpuMI	RGGWCCY	1 cut(s)	1165
Psp5II	RGGWCCY	1 cut(s)	1165
Psp6I	CCWGG	3 cut(s)	441, 829, 1002
PspGI	CCWGG	3 cut(s)	441, 829, 1002
PspN4I	GGNNCC	5 cut(s)	21, 154, 1166, 1167, 1194
PspPI	GGNCC	3 cut(s)	163, 1165, 1192
PspPPI	RGGWCCY	1 cut(s)	1165
PstNI	CAGNNNCTG	1 cut(s)	995
PsuI	RGATCY	1 cut(s)	546
RsaI	GTAC	3 cut(s)	335, 447, 542
RsaNI	GTAC	3 cut(s)	334, 446, 541
RseI	CAYNNNNRTG	2 cut(s)	378, 584
SalI	GTCGAC	1 cut(s)	845
SaqAI	TTAA	5 cut(s)	483, 528, 603, 945, 1143
SatI	GCNGC	2 cut(s)	350, 577
Sau3AI	GATC	2 cut(s)	251, 546
Sau96I	GGNCC	3 cut(s)	163, 1165, 1192
SchI	GAGTC	1 cut(s)	852
ScrFI	CCNGG	3 cut(s)	443, 831, 1004
SduI	GDGCHC	3 cut(s)	730, 881, 1046
SexAI	ACCWGGT	2 cut(s)	441, 1002
SfaNI	GCATC	2 cut(s)	501, 1045
SinI	GGWCC	2 cut(s)	1165, 1192
SmiMI	CAYNNNNRTG	2 cut(s)	378, 584
SmlI	CTYRAG	1 cut(s)	449
SmoI	CTYRAG	1 cut(s)	449
SphI	GCATGC	1 cut(s)	1205
Sse9I	AATT	8 cut(s)	99, 171, 183, 216, 932, 942, 1154, 1187
SsiI	CCGC	3 cut(s)	574, 1039, 1102
SspMI	CTAG	2 cut(s)	714, 1237
StyD4I	CCNGG	3 cut(s)	441, 829, 1002
StyI	CCWWGG	1 cut(s)	956
TaaI	ACNGT	5 cut(s)	130, 136, 301, 344, 469
TaiI	ACGT	3 cut(s)	542, 777, 1120
TaqI	TCGA	2 cut(s)	846, 1077
TasI	AATT	8 cut(s)	99, 171, 183, 216, 932, 942, 1154, 1187
TfiI	GAWTC	1 cut(s)	625
Tru1I	TTAA	5 cut(s)	483, 528, 603, 945, 1143
Tru9I	TTAA	5 cut(s)	483, 528, 603, 945, 1143
TseFI	GTSAC	2 cut(s)	175, 1088
TseI	GCWGC	2 cut(s)	349, 576
Tsp45I	GTSAC	2 cut(s)	175, 1088
TspDTI	ATGAA	8 cut(s)	101, 110, 441, 461, 923, 1095, 1167, 1199
TspGWI	ACGGA	2 cut(s)	523, 938
VneI	GTGCAC	1 cut(s)	1042
VpaK11BI	GGWCC	2 cut(s)	1165, 1192
XagI	CCTNNNNNAGG	1 cut(s)	27
XapI	RAATTY	1 cut(s)	932
XbaI	TCTAGA	1 cut(s)	713
XceI	RCATGY	1 cut(s)	1205
XmiI	GTMKAC	2 cut(s)	758, 846
XmnI	GAANNNNTTC	1 cut(s)	468
XspI	CTAG	2 cut(s)	714, 1237
ZraI	GACGTC	1 cut(s)	775
Zsp2I	ATGCAT	1 cut(s)	908

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.