Rorug01G0204500

zf-MYND-like zinc finger, mRNA-binding

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
28627764 .. 28665610
37847 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0204500.1

Sequence Viewer

Length: 1947 bp
ATGTGCATTAAGTATACATGGACACCTATAAAAGATGAAACCAGGAAGTTAATCAAGGCACAGTTGCAAAGAAAAATGGCTTCCAATCCTGGCATTCTGACTGAATGGCCATGGACACCTCTTGGAAACTTTAAGTACGTGTTGGTGGCTCCCTGGGCGATACACAGCATATACTCGTTCATTGTTAATGATGGAGAAGACAGAGATCTATCTTACTTCCTCATATTTCCATTCATGTTGTTTAGGATGCTGCACAACCAGTTATGGATCTCTTTTTCTCGATATAAAACCTCCAAAGGCAGCGGCCGGATCATCGACAAGGGCCTAGAGTTCGAACAAGTTGACAGAGAAAGAAACTGGGATGACCAAATTATATTCAATGGACTATTGTTCTTCCTAGGCAGCAGGCACGTGACCGGAGGTCGAAACCTACCGATGTGGAGAGGAGATGGATTCGTTATAACATTTCTGCTTCATGCTGGTCCAGTAGAGTTTCTATACTACTGGTTGCATAGAGCTCTGCACCACCATTACCTATACTCTCGCTACCATTCTCACCACCATTCCTCCATTGTCACTGAGCCAATTACTTCCGTAATTCACCCATTTGGGGAGCACATAGCATATTTTCTCCTTTTCGCAATACCCTTGTACACAATGGCGTTGACGGGAACAGGTTCAATCATATCCTATGCAGTTTATGTTACTTACATTGACTTGATGAACAACATGGGACACTGCAACTTCGAGCTCATTCCAAATTGGACCTTCTCTCTTTTTCCTCCACTCAAGTATTTCATATATACCCCATCGTACCACTCTTTGCATCACACCCTATTTCGAACCAATTATTGCCTCTTCATGCCACTTTATGATTACATTTATGGCACCATGGAAAAGACTAGTGATGAACTGTATGAATCTTCACTCAAAAGAAAAGATGAAGCTCCAGATGTGTTGCATCTAACCCATCTTACAACACCCGACTCCGTCTATCAACTTCCTTTGGGATTCGCTTCCTTGGCCTCTGAGCCGCACACTTCAACATGGTACATGTGGTTGATGTGGCCTGTTACATTTTGGTCGATGATGCTCACATGGATTTATGGTCGCACATTTGTGGTTGAGAGGCAGCGGTTTGATAAACTCAAATTACAAACTTGGGCGATCCCAAAATACAGTTTGCAATACTTCTTGCCATGGCAAAATGAAGCTATCAACAGTTTGATTGAGGAAGCTATACTTAAAGCAGAGGAAAAGGGTGTCAAAGTAGTAAGTTTGGGGCTCTTAAACCAGGGTGAGGAGCTGAATAGATATGGTGGTCTATATACTCGGAGATATCCTCAGCTGAAAGTAAAGGTAGTAGATGGAAGTAGCTTAGCTGTGGCTGCAATCCTCAACAGCATACCAAAAGAGACAACCCAAGTTGTTCTTACAGGCAACCTTACAAAGGTCGCTTATGCAATTGCATTTGCTTTGGGCCAGAGGGGCATTGAGGTAGCTACGTTATACAAGGATGAGTATTTGAAGCTTACCAAATCATTAAGTGCTACTAAGAGTGAGGTGGTTCTTGAAAAAGGCTCTGCTTCAAAGATTTGGTTGGTGGGAGATGGATTGAGTAAAGAAGACCAACTAAATGCACCGAAAGGAACAATGTTTGTTCCCTTCTCCCAATTCCCCCTAAAAAAGTTGCGCAGGGACTGCTTCTACCACTGCACTCCAGCAATGAAGATCCCCAAGTCTCTTGAGAATGTTTACTCGTGTGAGAACTGGTTGCCGAGAAGGGTGATGAGCGCATGGCGCATAGCCGGAATAGTGCATGCCTTGGAAGGTTGGAATGAACATGAATGTGGTTACGCCATGTCCGACATTGACAAGGTTTGGGAAGCTACGCTTCGACATGGCTTTCAGCCTCTGATCCCCAATGCTACTCCGAACAAATATTAA

Protein Analysis

648

Amino Acids

75.2

Weight (kDa)

8.71

Isoelectric Point (pI)

29.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FA_hydroxylase PF04116 158 - 297 4.2e-20 Fatty acid hydroxylase
CER1-like_C PF12076 476 - 638 1.1e-72 CER1-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000204)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G04625 AT1G27220 AT1G27250 AT1G27870 AT1G47497 AT1G47497 AT1G50160 AT1G52990 AT1G52990 AT1G77815 AT2G02650 AT2G04420 AT2G11205 AT2G13980 AT2G33160 AT2G46460 AT3G09510 AT3G23320 AT3G25270 AT3G32130 AT4G03292 AT4G09775 AT5G26617 AT5G44470 AT5G52115 AT5G65005
fragaria_vesca FvH4_1g25222 FvH4_1g28481 FvH4_3g03751 FvH4_3g24081 FvH4_3g35341 FvH4_5g31961 FvH4_6g20891 FvH4_6g23253 FvH4_6g31361 FvH4_6g53051
malus_domestica MD14G1209300.v1.1
prunus_persica Prupe.1G168800_v2.0.a1 Prupe.1G509200_v2.0.a1 Prupe.2G042000_v2.0.a1 Prupe.2G133200_v2.0.a1 Prupe.2G140300_v2.0.a1 Prupe.3G103800_v2.0.a1 Prupe.4G217300_v2.0.a1 Prupe.4G245300_v2.0.a1 Prupe.5G002600_v2.0.a1 Prupe.5G134600_v2.0.a1 Prupe.6G185900_v2.0.a1 Prupe.6G308300_v2.0.a1 Prupe.7G010700_v2.0.a1 Prupe.8G078100_v2.0.a1 Prupe.8G128400_v2.0.a1
pyrus_communis pycom01g14230 pycom03g12410 pycom08g15160 pycom08g21670 pycom10g25730 pycom10g25740 pycom11g15380 pycom14g10440 pycom14g11510 pycom15g31840 pycom16g02370
rosa_chinensis RchiOBHm_Chr4g0440421 RchiOBHm_Chr5g0005841 RchiOBHm_Chr6g0289481 RchiOBHm_Chr7g0218671
rosa_laevigata RLG00000011653 RLG00000031330 RLG00000031331 RLG00000032722
rosa_multiflora Rmu_co8243061.1_g000001 Rmu_sc0000470.1_g000036 Rmu_sc0000581.1_g000008 Rmu_sc0000666.1_g000017 Rmu_sc0000905.1_g000019 Rmu_sc0000976.1_g000013 Rmu_sc0001066.1_g000001 Rmu_sc0001103.1_g000007 Rmu_sc0001180.1_g000001 Rmu_sc0001643.1_g000034 Rmu_sc0001759.1_g000007 Rmu_sc0001850.1_g000051 Rmu_sc0001910.1_g000008 Rmu_sc0001981.1_g000015 Rmu_sc0001981.1_g000029 Rmu_sc0002209.1_g000015 Rmu_sc0002406.1_g000010 Rmu_sc0003743.1_g000002 Rmu_sc0006416.1_g000026 Rmu_sc0006513.1_g000006 Rmu_sc0006577.1_g000010 Rmu_sc0014652.1_g000001 Rmu_sc0016202.1_g000003
rosa_roxburghii Rroxscaffold_1G00001530 Rroxscaffold_1G00047250 Rroxscaffold_5G00340720 Rroxscaffold_7G00171110 Rroxscaffold_7G00177650
rosa_rugosa Rorug01G0044800 Rorug01G0204500 Rorug01G0224700 Rorug01G0267800 Rorug02G0038400 Rorug02G0107100 Rorug02G0180700 Rorug02G0363800 Rorug02G0374300 Rorug02G0491400 Rorug02G0491400 Rorug03G0104200 Rorug03G0109800 Rorug03G0334200 Rorug04G0007100 Rorug04G0061400.1 Rorug04G0080000 Rorug05G0152200 Rorug05G0188800 Rorug05G0234800 Rorug05G0239900 Rorug05G0284800 Rorug06G0044700 Rorug06G0205700 Rorug06G0266900 Rorug06G0440700 Rorug07G0037400 Rorug07G0192100 Rorug07G0196900 Rorug07G0237500 Rorug07G0336400.1 RorugPtG0002500.1
rosa_samantha Rh1BG014800 Rh1CG017500 Rh2CG332500 Rh3BG371800 Rh5AG046000 Rh5AG046100 Rh5BG044700 Rh5BG044800 Rh5BG248000 Rh5CG053600 Rh5CG053700 Rh5DG044500 Rh5DG044600 Rh6AG052800 Rh6AG315400 Rh6DG021400 Rh7AG409500
rosa_wichuraiana Rw3G007750 Rw3G018750 Rw4G008820 Rw5G004630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 461
Acc16I TGCGCA 1 cut(s) 1694
AccB1I GGYRCC 1 cut(s) 887
AccI GTMKAC 1 cut(s) 14
AciI CCGC 3 cut(s) 303, 1034, 1135
AclWI GGATC 5 cut(s) 275, 317, 1162, 1726, 1912
AcoI YGGCCR 2 cut(s) 107, 304
AcvI CACGTG 1 cut(s) 412
AfaI GTAC 4 cut(s) 137, 653, 815, 1052
AfiI CCNNNNNNNGG 3 cut(s) 610, 1300, 1450
AflIII ACRYGT 2 cut(s) 138, 1053
AgsI TTSAA 6 cut(s) 379, 681, 1044, 1528, 1574, 1590
AhdI GACNNNNNGTC 1 cut(s) 420
AhlI ACTAGT 1 cut(s) 902
AjnI CCWGG 4 cut(s) 41, 88, 152, 1293
AleI CACNNNNGTG 1 cut(s) 1118
Alw21I GWGCWC 3 cut(s) 520, 618, 753
Alw26I GTCTC 2 cut(s) 1409, 1746
AlwI GGATC 5 cut(s) 275, 317, 1162, 1726, 1912
AlwNI CAGNNNCTG 2 cut(s) 1701, 1915
AoxI GGCC 6 cut(s) 107, 304, 322, 1023, 1067, 1480
ApeKI GCWGC 5 cut(s) 250, 300, 402, 1132, 1388
Asp700I GAANNNNTTC 1 cut(s) 676
AspA2I CCTAGG 1 cut(s) 397
AspLEI GCGC 3 cut(s) 1695, 1796, 1803
AspS9I GGNCC 4 cut(s) 322, 482, 765, 1480
AsuHPI GGTGA 4 cut(s) 548, 593, 1310, 1798
AsuII TTCGAA 2 cut(s) 333, 841
AvaII GGWCC 2 cut(s) 482, 765
AvrII CCTAGG 1 cut(s) 397
BalI TGGCCA 1 cut(s) 109
BanI GGYRCC 1 cut(s) 887
BanII GRGCYC 3 cut(s) 520, 753, 1287
BauI CACGAG 1 cut(s) 1759
BbrPI CACGTG 1 cut(s) 412
BbsI GAAGAC 2 cut(s) 204, 1632
Bbv12I GWGCWC 3 cut(s) 520, 618, 753
BbvCI CCTCAGC 1 cut(s) 1344
BbvI GCAGC 5 cut(s) 237, 312, 414, 1144, 1375
BccI CCATC 6 cut(s) 185, 443, 817, 978, 1361, 1604
BciT130I CCWGG 4 cut(s) 43, 90, 154, 1295
BcoDI GTCTC 2 cut(s) 1409, 1746
BcuI ACTAGT 1 cut(s) 902
BfaI CTAG 3 cut(s) 326, 398, 903
BglI GCCNNNNNGGC 1 cut(s) 1488
BglII AGATCT 1 cut(s) 205
BisI GCNGC 7 cut(s) 251, 301, 304, 403, 1034, 1133, 1389
BlnI CCTAGG 1 cut(s) 397
BlpI GCTNAGC 1 cut(s) 1378
BlsI GCNGC 7 cut(s) 252, 302, 305, 404, 1035, 1134, 1390
Bme1390I CCNGG 4 cut(s) 43, 90, 154, 1295
Bme18I GGWCC 2 cut(s) 482, 765
BmeRI GACNNNNNGTC 1 cut(s) 420
BmgT120I GGNCC 4 cut(s) 322, 482, 765, 1480
BmiI GGNNCC 2 cut(s) 150, 889
BmrFI CCNGG 4 cut(s) 43, 90, 154, 1295
BmrI ACTGGG 1 cut(s) 367
BmsI GCATC 4 cut(s) 237, 835, 970, 1080
BmuI ACTGGG 1 cut(s) 367
BpiI GAAGAC 2 cut(s) 204, 1632
BplI GAGNNNNNCTC 2 cut(s) 1327, 1359
BpmI CTGGAG 2 cut(s) 933, 1704
Bpu10I CCTNAGC 1 cut(s) 1344
Bpu1102I GCTNAGC 1 cut(s) 1378
Bpu14I TTCGAA 2 cut(s) 333, 841
BpuEI CTTGAG 2 cut(s) 773, 1766
BsaAI YACGTR 2 cut(s) 139, 412
BsaJI CCNNGG 9 cut(s) 110, 152, 153, 397, 891, 1020, 1199, 1294, 1824
BsaWI WCCGGW 1 cut(s) 416
BsaXI ACNNNNNCTCC 2 cut(s) 551, 581
Bsc4I CCNNNNNNNGG 3 cut(s) 610, 1300, 1450
Bse1I ACTGG 5 cut(s) 259, 362, 485, 509, 1775
Bse3DI GCAATG 1 cut(s) 1731
BseBI CCWGG 4 cut(s) 43, 90, 154, 1295
BseDI CCNNGG 9 cut(s) 110, 152, 153, 397, 891, 1020, 1199, 1294, 1824
BseGI GGATG 3 cut(s) 252, 367, 1522
BseLI CCNNNNNNNGG 3 cut(s) 610, 1300, 1450
BseMI GCAATG 1 cut(s) 1731
BseMII CTCAG 3 cut(s) 570, 1020, 1358
BseNI ACTGG 5 cut(s) 259, 362, 485, 509, 1775
BseRI GAGGAG 2 cut(s) 459, 1316
BseX3I CGGCCG 1 cut(s) 304
BseXI GCAGC 5 cut(s) 237, 312, 414, 1144, 1375
BsgI GTGCAG 3 cut(s) 236, 506, 1699
Bsh1285I CGRYCG 1 cut(s) 307
BshFI GGCC 6 cut(s) 109, 306, 324, 1025, 1069, 1482
BshNI GGYRCC 1 cut(s) 887
BsiEI CGRYCG 1 cut(s) 307
BsiHKAI GWGCWC 3 cut(s) 520, 618, 753
BsiSI CCGG 3 cut(s) 307, 417, 1809
BslFI GGGAC 2 cut(s) 747, 1712
BslI CCNNNNNNNGG 3 cut(s) 610, 1300, 1450
BsmAI GTCTC 2 cut(s) 1409, 1746
BsmFI GGGAC 2 cut(s) 747, 1712
BsmI GAATGC 1 cut(s) 93
BsnI GGCC 6 cut(s) 109, 306, 324, 1025, 1069, 1482
Bsp119I TTCGAA 2 cut(s) 333, 841
Bsp1286I GDGCHC 4 cut(s) 520, 618, 753, 1287
Bsp1407I TGTACA 1 cut(s) 651
Bsp143I GATC 6 cut(s) 205, 267, 309, 1167, 1731, 1917
Bsp1720I GCTNAGC 1 cut(s) 1378
Bsp19I CCATGG 3 cut(s) 110, 891, 1199
BspACI CCGC 3 cut(s) 303, 1034, 1135
BspANI GGCC 6 cut(s) 109, 306, 324, 1025, 1069, 1482
BspCNI CTCAG 3 cut(s) 571, 1021, 1357
BspLI GGNNCC 2 cut(s) 150, 889
BspPI GGATC 5 cut(s) 275, 317, 1162, 1726, 1912
BspT104I TTCGAA 2 cut(s) 333, 841
BspT107I GGYRCC 1 cut(s) 887
BsrDI GCAATG 1 cut(s) 1731
BsrGI TGTACA 1 cut(s) 651
BsrI ACTGG 5 cut(s) 259, 362, 485, 509, 1775
BssECI CCNNGG 9 cut(s) 110, 152, 153, 397, 891, 1020, 1199, 1294, 1824
BssMI GATC 6 cut(s) 205, 267, 309, 1167, 1731, 1917
BssNAI GTATAC 1 cut(s) 15
BssSI CACGAG 1 cut(s) 1759
BssT1I CCWWGG 6 cut(s) 110, 397, 891, 1020, 1199, 1824
Bst1107I GTATAC 1 cut(s) 15
Bst2BI CACGAG 1 cut(s) 1759
Bst2UI CCWGG 4 cut(s) 43, 90, 154, 1295
Bst4CI ACNGT 4 cut(s) 63, 915, 1181, 1223
Bst6I CTCTTC 1 cut(s) 863
BstAPI GCANNNNNTGC 1 cut(s) 1701
BstAUI TGTACA 1 cut(s) 651
BstBAI YACGTR 2 cut(s) 139, 412
BstBI TTCGAA 2 cut(s) 333, 841
BstC8I GCNNGC 2 cut(s) 407, 1821
BstDEI CTNAG 5 cut(s) 579, 1029, 1344, 1378, 1554
BstDSI CCRYGG 3 cut(s) 110, 891, 1199
BstENI CCTNNNNNAGG 1 cut(s) 1448
BstF5I GGATG 3 cut(s) 252, 367, 1522
BstHHI GCGC 3 cut(s) 1695, 1796, 1803
BstKTI GATC 6 cut(s) 208, 270, 312, 1170, 1734, 1920
BstMAI GTCTC 2 cut(s) 1409, 1746
BstMBI GATC 6 cut(s) 205, 267, 309, 1167, 1731, 1917
BstMCI CGRYCG 1 cut(s) 307
BstMWI GCNNNNNNNGC 6 cut(s) 155, 1022, 1388, 1488, 1701, 1800
BstNI CCWGG 4 cut(s) 43, 90, 154, 1295
BstNSI RCATGY 2 cut(s) 1057, 1823
BstSCI CCNGG 4 cut(s) 41, 88, 152, 1293
BstV1I GCAGC 5 cut(s) 237, 312, 414, 1144, 1375
BstV2I GAAGAC 2 cut(s) 204, 1632
BstX2I RGATCY 3 cut(s) 205, 267, 1731
BstYI RGATCY 3 cut(s) 205, 267, 1731
BstZ17I GTATAC 1 cut(s) 15
BstZI CGGCCG 1 cut(s) 304
BsuRI GGCC 6 cut(s) 109, 306, 324, 1025, 1069, 1482
BtgI CCRYGG 3 cut(s) 110, 891, 1199
BtsCI GGATG 3 cut(s) 252, 367, 1522
BtsI GCAGTG 2 cut(s) 736, 1711
BtsIMutI CAGTG 3 cut(s) 576, 736, 1711
Cac8I GCNNGC 2 cut(s) 407, 1821
CaiI CAGNNNCTG 2 cut(s) 1701, 1915
CfoI GCGC 3 cut(s) 1695, 1796, 1803
Cfr13I GGNCC 4 cut(s) 322, 482, 765, 1480
Csp6I GTAC 4 cut(s) 136, 652, 814, 1051
CviQI GTAC 4 cut(s) 136, 652, 814, 1051
DdeI CTNAG 5 cut(s) 579, 1029, 1344, 1378, 1554
DpnI GATC 6 cut(s) 207, 269, 311, 1169, 1733, 1919
DpnII GATC 6 cut(s) 205, 267, 309, 1167, 1731, 1917
DriI GACNNNNNGTC 1 cut(s) 420
EaeI YGGCCR 2 cut(s) 107, 304
EagI CGGCCG 1 cut(s) 304
Eam1104I CTCTTC 1 cut(s) 863
Eam1105I GACNNNNNGTC 1 cut(s) 420
EarI CTCTTC 1 cut(s) 863
Ecl136II GAGCTC 2 cut(s) 518, 751
EclXI CGGCCG 1 cut(s) 304
Eco130I CCWWGG 6 cut(s) 110, 397, 891, 1020, 1199, 1824
Eco24I GRGCYC 3 cut(s) 520, 753, 1287
Eco32I GATATC 1 cut(s) 1340
Eco47I GGWCC 2 cut(s) 482, 765
Eco52I CGGCCG 1 cut(s) 304
Eco53kI GAGCTC 2 cut(s) 518, 751
Eco72I CACGTG 1 cut(s) 412
EcoICRI GAGCTC 2 cut(s) 518, 751
EcoNI CCTNNNNNAGG 1 cut(s) 1448
EcoO109I RGGNCCY 1 cut(s) 322
EcoRII CCWGG 4 cut(s) 41, 88, 152, 1293
EcoRV GATATC 1 cut(s) 1340
EcoT14I CCWWGG 6 cut(s) 110, 397, 891, 1020, 1199, 1824
EcoT38I GRGCYC 3 cut(s) 520, 753, 1287
ErhI CCWWGG 6 cut(s) 110, 397, 891, 1020, 1199, 1824
FalI AAGNNNNNCTT 6 cut(s) 1227, 1259, 1416, 1448, 1878, 1910
FaqI GGGAC 2 cut(s) 747, 1712
FblI GTMKAC 1 cut(s) 14
Fnu4HI GCNGC 7 cut(s) 251, 301, 304, 403, 1034, 1133, 1389
FokI GGATG 3 cut(s) 259, 374, 1529
FriOI GRGCYC 3 cut(s) 520, 753, 1287
Fsp4HI GCNGC 7 cut(s) 251, 301, 304, 403, 1034, 1133, 1389
FspBI CTAG 3 cut(s) 326, 398, 903
FspI TGCGCA 1 cut(s) 1694
GlaI GCGC 3 cut(s) 1694, 1795, 1802
GluI GCNGC 7 cut(s) 251, 301, 304, 403, 1034, 1133, 1389
GsuI CTGGAG 2 cut(s) 933, 1704
HaeIII GGCC 6 cut(s) 109, 306, 324, 1025, 1069, 1482
HapII CCGG 3 cut(s) 307, 417, 1809
HhaI GCGC 3 cut(s) 1695, 1796, 1803
Hin6I GCGC 3 cut(s) 1693, 1794, 1801
HinP1I GCGC 3 cut(s) 1693, 1794, 1801
HincII GTYRAC 2 cut(s) 343, 666
HindII GTYRAC 2 cut(s) 343, 666
HindIII AAGCTT 1 cut(s) 1529
HinfI GANTC 4 cut(s) 453, 920, 986, 1011
HpaII CCGG 3 cut(s) 307, 417, 1809
HphI GGTGA 4 cut(s) 548, 593, 1310, 1798
Hpy166II GTNNAC 5 cut(s) 15, 343, 654, 666, 1756
Hpy188I TCNGA 6 cut(s) 99, 1030, 1335, 1867, 1917, 1935
Hpy188III TCNNGA 4 cut(s) 279, 950, 1571, 1745
Hpy8I GTNNAC 5 cut(s) 15, 343, 654, 666, 1756
HpyAV CCTTC 4 cut(s) 778, 1675, 1776, 1823
HpyCH4III ACNGT 4 cut(s) 63, 915, 1181, 1223
HpyCH4IV ACGT 3 cut(s) 138, 411, 1505
HpyF10VI GCNNNNNNNGC 6 cut(s) 155, 1022, 1388, 1488, 1701, 1800
HpyF3I CTNAG 5 cut(s) 579, 1029, 1344, 1378, 1554
HpySE526I ACGT 3 cut(s) 138, 411, 1505
HspAI GCGC 3 cut(s) 1693, 1794, 1801
Kzo9I GATC 6 cut(s) 205, 267, 309, 1167, 1731, 1917
LmnI GCTCC 4 cut(s) 154, 613, 952, 1303
Lsp1109I GCAGC 5 cut(s) 237, 312, 414, 1144, 1375
LweI GCATC 4 cut(s) 237, 835, 970, 1080
MaeI CTAG 3 cut(s) 326, 398, 903
MaeII ACGT 3 cut(s) 138, 411, 1505
MaeIII GTNAC 5 cut(s) 412, 574, 703, 1072, 1853
MalI GATC 6 cut(s) 207, 269, 311, 1169, 1733, 1919
MboI GATC 6 cut(s) 205, 267, 309, 1167, 1731, 1917
MboII GAAGA 6 cut(s) 209, 385, 850, 915, 1637, 1741
MfeI CAATTG 1 cut(s) 1464
MflI RGATCY 3 cut(s) 205, 267, 1731
MhlI GDGCHC 4 cut(s) 520, 618, 753, 1287
MlsI TGGCCA 1 cut(s) 109
MluCI AATT 8 cut(s) 369, 585, 597, 760, 847, 1151, 1464, 1673
MluNI TGGCCA 1 cut(s) 109
MlyI GAGTC 1 cut(s) 980
MmeI TCCRAC 2 cut(s) 1814, 1890
Mox20I TGGCCA 1 cut(s) 109
MroXI GAANNNNTTC 1 cut(s) 676
MscI TGGCCA 1 cut(s) 109
MseI TTAA 8 cut(s) 9, 50, 132, 186, 1245, 1289, 1544, 1945
MslI CAYNNNNRTG 2 cut(s) 1118, 1848
Msp20I TGGCCA 1 cut(s) 109
MspA1I CMGCKG 3 cut(s) 303, 1135, 1348
MspI CCGG 3 cut(s) 307, 417, 1809
MspR9I CCNGG 4 cut(s) 43, 90, 154, 1295
MunI CAATTG 1 cut(s) 1464
Mva1269I GAATGC 1 cut(s) 93
MvaI CCWGG 4 cut(s) 43, 90, 154, 1295
MwoI GCNNNNNNNGC 6 cut(s) 155, 1022, 1388, 1488, 1701, 1800
NcoI CCATGG 3 cut(s) 110, 891, 1199
NdeII GATC 6 cut(s) 205, 267, 309, 1167, 1731, 1917
NlaIV GGNNCC 2 cut(s) 150, 889
NmeAIII GCCGAG 1 cut(s) 1803
NmuCI GTSAC 2 cut(s) 412, 574
NsbI TGCGCA 1 cut(s) 1694
NspI RCATGY 2 cut(s) 1057, 1823
NspV TTCGAA 2 cut(s) 333, 841
OliI CACNNNNGTG 1 cut(s) 1118
PaeI GCATGC 1 cut(s) 1823
PasI CCCWGGG 1 cut(s) 153
PciI ACATGT 1 cut(s) 1053
PcsI WCGNNNNNNNCGW 1 cut(s) 1863
PctI GAATGC 1 cut(s) 93
PdmI GAANNNNTTC 1 cut(s) 676
PfeI GAWTC 3 cut(s) 453, 920, 1011
PflFI GACNNNGTC 1 cut(s) 989
PkrI GCNGC 7 cut(s) 252, 302, 305, 404, 1035, 1134, 1390
PleI GAGTC 1 cut(s) 980
PmaCI CACGTG 1 cut(s) 412
PmlI CACGTG 1 cut(s) 412
PpsI GAGTC 1 cut(s) 980
Ppu21I YACGTR 2 cut(s) 139, 412
PscI ACATGT 1 cut(s) 1053
PsiI TTATAA 1 cut(s) 461
Psp124BI GAGCTC 2 cut(s) 520, 753
Psp6I CCWGG 4 cut(s) 41, 88, 152, 1293
PspCI CACGTG 1 cut(s) 412
PspGI CCWGG 4 cut(s) 41, 88, 152, 1293
PspN4I GGNNCC 2 cut(s) 150, 889
PspPI GGNCC 4 cut(s) 322, 482, 765, 1480
PstNI CAGNNNCTG 2 cut(s) 1701, 1915
PsuI RGATCY 3 cut(s) 205, 267, 1731
PsyI GACNNNGTC 1 cut(s) 989
PvuII CAGCTG 1 cut(s) 1348
RsaI GTAC 4 cut(s) 137, 653, 815, 1052
RsaNI GTAC 4 cut(s) 136, 652, 814, 1051
RseI CAYNNNNRTG 2 cut(s) 1118, 1848
SacI GAGCTC 2 cut(s) 520, 753
SaqAI TTAA 8 cut(s) 9, 50, 132, 186, 1245, 1289, 1544, 1945
SatI GCNGC 7 cut(s) 251, 301, 304, 403, 1034, 1133, 1389
Sau3AI GATC 6 cut(s) 205, 267, 309, 1167, 1731, 1917
Sau96I GGNCC 4 cut(s) 322, 482, 765, 1480
SchI GAGTC 1 cut(s) 980
ScrFI CCNGG 4 cut(s) 43, 90, 154, 1295
SduI GDGCHC 4 cut(s) 520, 618, 753, 1287
SfaNI GCATC 4 cut(s) 237, 835, 970, 1080
SfuI TTCGAA 2 cut(s) 333, 841
SinI GGWCC 2 cut(s) 482, 765
SmiMI CAYNNNNRTG 2 cut(s) 1118, 1848
SmlI CTYRAG 2 cut(s) 788, 1745
SmoI CTYRAG 2 cut(s) 788, 1745
SpeI ACTAGT 1 cut(s) 902
SphI GCATGC 1 cut(s) 1823
Sse9I AATT 8 cut(s) 369, 585, 597, 760, 847, 1151, 1464, 1673
SsiI CCGC 3 cut(s) 303, 1034, 1135
SspI AATATT 1 cut(s) 1943
SspMI CTAG 3 cut(s) 326, 398, 903
SstI GAGCTC 2 cut(s) 520, 753
StyD4I CCNGG 4 cut(s) 41, 88, 152, 1293
StyI CCWWGG 6 cut(s) 110, 397, 891, 1020, 1199, 1824
TaaI ACNGT 4 cut(s) 63, 915, 1181, 1223
TaiI ACGT 3 cut(s) 141, 414, 1508
TaqI TCGA 8 cut(s) 280, 315, 333, 424, 747, 841, 1085, 1897
TasI AATT 8 cut(s) 369, 585, 597, 760, 847, 1151, 1464, 1673
TatI WGTACW 1 cut(s) 651
TauI GCSGC 2 cut(s) 306, 1036
TfiI GAWTC 3 cut(s) 453, 920, 1011
Tru1I TTAA 8 cut(s) 9, 50, 132, 186, 1245, 1289, 1544, 1945
Tru9I TTAA 8 cut(s) 9, 50, 132, 186, 1245, 1289, 1544, 1945
TscAI CASTG 3 cut(s) 583, 743, 1718
TseFI GTSAC 2 cut(s) 412, 574
TseI GCWGC 5 cut(s) 250, 300, 402, 1132, 1388
Tsp45I GTSAC 2 cut(s) 412, 574
TspGWI ACGGA 2 cut(s) 583, 979
TspRI CASTG 3 cut(s) 583, 743, 1718
Tth111I GACNNNGTC 1 cut(s) 989
VpaK11BI GGWCC 2 cut(s) 482, 765
XagI CCTNNNNNAGG 1 cut(s) 1448
XceI RCATGY 2 cut(s) 1057, 1823
XmaJI CCTAGG 1 cut(s) 397
XmiI GTMKAC 1 cut(s) 14
XmnI GAANNNNTTC 1 cut(s) 676
XspI CTAG 3 cut(s) 326, 398, 903
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.