Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 3 cut(s) | 46, 158, 348 |
| AciI | CCGC | 1 cut(s) | 413 |
| AcsI | RAATTY | 1 cut(s) | 178 |
| AgsI | TTSAA | 3 cut(s) | 176, 197, 338 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 318, 350 |
| AluBI | AGCT | 5 cut(s) | 155, 277, 357, 466, 508 |
| AluI | AGCT | 5 cut(s) | 155, 277, 357, 466, 508 |
| Alw26I | GTCTC | 2 cut(s) | 224, 392 |
| AoxI | GGCC | 1 cut(s) | 433 |
| ApoI | RAATTY | 1 cut(s) | 178 |
| AseI | ATTAAT | 1 cut(s) | 96 |
| AsuHPI | GGTGA | 1 cut(s) | 278 |
| BanI | GGYRCC | 3 cut(s) | 46, 158, 348 |
| BanII | GRGCYC | 1 cut(s) | 444 |
| BccI | CCATC | 1 cut(s) | 209 |
| BcoDI | GTCTC | 2 cut(s) | 224, 392 |
| BfaI | CTAG | 3 cut(s) | 152, 431, 528 |
| BmiI | GGNNCC | 3 cut(s) | 48, 160, 350 |
| BmsI | GCATC | 1 cut(s) | 22 |
| Bpu10I | CCTNAGC | 1 cut(s) | 353 |
| BsaI | GGTCTC | 1 cut(s) | 224 |
| BsaJI | CCNNGG | 2 cut(s) | 314, 436 |
| Bse1I | ACTGG | 1 cut(s) | 118 |
| BseDI | CCNNGG | 2 cut(s) | 314, 436 |
| BseGI | GGATG | 1 cut(s) | 220 |
| BseMII | CTCAG | 1 cut(s) | 310 |
| BseNI | ACTGG | 1 cut(s) | 118 |
| BshFI | GGCC | 1 cut(s) | 435 |
| BshNI | GGYRCC | 3 cut(s) | 46, 158, 348 |
| BsmAI | GTCTC | 2 cut(s) | 224, 392 |
| BsnI | GGCC | 1 cut(s) | 435 |
| Bso31I | GGTCTC | 1 cut(s) | 224 |
| Bsp1286I | GDGCHC | 1 cut(s) | 444 |
| Bsp19I | CCATGG | 1 cut(s) | 436 |
| BspACI | CCGC | 1 cut(s) | 413 |
| BspANI | GGCC | 1 cut(s) | 435 |
| BspCNI | CTCAG | 1 cut(s) | 309 |
| BspLI | GGNNCC | 3 cut(s) | 48, 160, 350 |
| BspT107I | GGYRCC | 3 cut(s) | 46, 158, 348 |
| BspTNI | GGTCTC | 1 cut(s) | 224 |
| BsrI | ACTGG | 1 cut(s) | 118 |
| BssECI | CCNNGG | 2 cut(s) | 314, 436 |
| BssT1I | CCWWGG | 1 cut(s) | 436 |
| Bst4CI | ACNGT | 2 cut(s) | 172, 304 |
| BstDEI | CTNAG | 3 cut(s) | 273, 296, 353 |
| BstDSI | CCRYGG | 1 cut(s) | 436 |
| BstF5I | GGATG | 1 cut(s) | 220 |
| BstMAI | GTCTC | 2 cut(s) | 224, 392 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 448, 514 |
| BstNSI | RCATGY | 1 cut(s) | 389 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 190 |
| BsuRI | GGCC | 1 cut(s) | 435 |
| BtgI | CCRYGG | 1 cut(s) | 436 |
| BtgZI | GCGATG | 1 cut(s) | 432 |
| BtsCI | GGATG | 1 cut(s) | 220 |
| BtsI | GCAGTG | 1 cut(s) | 408 |
| BtsIMutI | CAGTG | 3 cut(s) | 111, 168, 408 |
| CviAII | CATG | 3 cut(s) | 143, 386, 437 |
| DdeI | CTNAG | 3 cut(s) | 273, 296, 353 |
| Eco130I | CCWWGG | 1 cut(s) | 436 |
| Eco24I | GRGCYC | 1 cut(s) | 444 |
| Eco31I | GGTCTC | 1 cut(s) | 224 |
| Eco32I | GATATC | 1 cut(s) | 343 |
| EcoRV | GATATC | 1 cut(s) | 343 |
| EcoT14I | CCWWGG | 1 cut(s) | 436 |
| EcoT38I | GRGCYC | 1 cut(s) | 444 |
| ErhI | CCWWGG | 1 cut(s) | 436 |
| FaeI | CATG | 3 cut(s) | 146, 389, 440 |
| FatI | CATG | 3 cut(s) | 142, 385, 436 |
| FokI | GGATG | 1 cut(s) | 227 |
| FriOI | GRGCYC | 1 cut(s) | 444 |
| FspBI | CTAG | 3 cut(s) | 152, 431, 528 |
| HaeIII | GGCC | 1 cut(s) | 435 |
| Hin1II | CATG | 3 cut(s) | 146, 389, 440 |
| HindIII | AAGCTT | 1 cut(s) | 275 |
| HinfI | GANTC | 1 cut(s) | 269 |
| HphI | GGTGA | 1 cut(s) | 278 |
| Hpy188I | TCNGA | 3 cut(s) | 252, 299, 318 |
| Hpy188III | TCNNGA | 2 cut(s) | 221, 338 |
| HpyAV | CCTTC | 1 cut(s) | 257 |
| HpyCH4III | ACNGT | 2 cut(s) | 172, 304 |
| HpyCH4V | TGCA | 1 cut(s) | 365 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 448, 514 |
| HpyF3I | CTNAG | 3 cut(s) | 273, 296, 353 |
| Hsp92II | CATG | 3 cut(s) | 146, 389, 440 |
| LmnI | GCTCC | 1 cut(s) | 463 |
| LpnPI | CCDG | 4 cut(s) | 99, 141, 331, 395 |
| LweI | GCATC | 1 cut(s) | 22 |
| MaeI | CTAG | 3 cut(s) | 152, 431, 528 |
| MaeIII | GTNAC | 2 cut(s) | 147, 266 |
| MhlI | GDGCHC | 1 cut(s) | 444 |
| MluCI | AATT | 6 cut(s) | 61, 72, 97, 178, 307, 330 |
| MlyI | GAGTC | 1 cut(s) | 263 |
| MmeI | TCCRAC | 1 cut(s) | 349 |
| MnlI | CCTC | 5 cut(s) | 63, 233, 305, 324, 524 |
| MseI | TTAA | 4 cut(s) | 69, 75, 96, 306 |
| MslI | CAYNNNNRTG | 1 cut(s) | 188 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 448, 514 |
| NcoI | CCATGG | 1 cut(s) | 436 |
| NlaIII | CATG | 3 cut(s) | 146, 389, 440 |
| NlaIV | GGNNCC | 3 cut(s) | 48, 160, 350 |
| NmuCI | GTSAC | 1 cut(s) | 266 |
| NspI | RCATGY | 1 cut(s) | 389 |
| PflFI | GACNNNGTC | 1 cut(s) | 290 |
| PleI | GAGTC | 1 cut(s) | 263 |
| PpsI | GAGTC | 1 cut(s) | 263 |
| PshBI | ATTAAT | 1 cut(s) | 96 |
| PspN4I | GGNNCC | 3 cut(s) | 48, 160, 350 |
| PsyI | GACNNNGTC | 1 cut(s) | 290 |
| RseI | CAYNNNNRTG | 1 cut(s) | 188 |
| SaqAI | TTAA | 4 cut(s) | 69, 75, 96, 306 |
| SchI | GAGTC | 1 cut(s) | 263 |
| SduI | GDGCHC | 1 cut(s) | 444 |
| SetI | ASST | 9 cut(s) | 157, 244, 268, 279, 354, 359, 468, 510, 535 |
| SfaNI | GCATC | 1 cut(s) | 22 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 188 |
| Sse9I | AATT | 6 cut(s) | 61, 72, 97, 178, 307, 330 |
| SsiI | CCGC | 1 cut(s) | 413 |
| SspMI | CTAG | 3 cut(s) | 152, 431, 528 |
| StyI | CCWWGG | 1 cut(s) | 436 |
| TaaI | ACNGT | 2 cut(s) | 172, 304 |
| TaqI | TCGA | 1 cut(s) | 222 |
| TasI | AATT | 6 cut(s) | 61, 72, 97, 178, 307, 330 |
| Tru1I | TTAA | 4 cut(s) | 69, 75, 96, 306 |
| Tru9I | TTAA | 4 cut(s) | 69, 75, 96, 306 |
| TscAI | CASTG | 3 cut(s) | 118, 175, 415 |
| TseFI | GTSAC | 1 cut(s) | 266 |
| Tsp45I | GTSAC | 1 cut(s) | 266 |
| TspDTI | ATGAA | 1 cut(s) | 112 |
| TspRI | CASTG | 3 cut(s) | 118, 175, 415 |
| Tth111I | GACNNNGTC | 1 cut(s) | 290 |
| VspI | ATTAAT | 1 cut(s) | 96 |
| XapI | RAATTY | 1 cut(s) | 178 |
| XceI | RCATGY | 1 cut(s) | 389 |
| XspI | CTAG | 3 cut(s) | 152, 431, 528 |