Rorug06G0266900

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000204
Physical Location & Seq
Reverse (-)
41336041 .. 41337312
1272 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0266900.1

Sequence Viewer

Length: 729 bp
ATGGCTTCTTTCTCTCCCCTCCTCCTCCTCCTCCTGATCTCCCTCTCGGCTCTGCTAATCTTACCCTCTCAGTCAGCCGACTGCCCCTCCGCCAAGTTCAAGAACAACAAGTCCTTCAGCAACTGCACCGCCCTCTCCTCCCTCAGCTCCTACCTCCACTATACCTACAACGCCTCCAACTCCTCCCTCGCCGTCGCCTTCATCGCCAAACCTCCCAAGTCCGGCGGCTGGATCGCCTGGGCCATCAACCCCAACGGCACCAAAATGCCCGGCGCTCAAGCCATAGTCGCCTACACCAAAGAAGACGGCACCCCCATGATCAAAACCCTCGACATCAAATCCTACAGCGAACTGAATCCCGGAAAGCTCGCCTTCGACGTCTGGGACACCAGCGCCGAGCTCACCGCCGACGGAAACTTAACGCTCTTCGCCACCGTCAAGGTTCCGGAGAAGGCAGAGACGCTGAACCAGGTCTGGCAGGTGGGCCCTGGAGTCAACCAGTCCAACGGCTTTATCATGAAGCACGAAATGGGCAAGGAAAATCTCGCCGCGTACGGTCTCTTGAGATTGGCCGGCACCGGCAGTACCAACACCACAAACACCACTAGTGGCGGCGCGGCTAGTCCCACGAGTGCTAAGAGTGGAGCGCCCTTGAGGATTCGTGAAGGAGGACACGTGGGTTTGTTCTCTATTTTGCTCTTGGTCCTTGGGACTCTTCTTGTTTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_3 zf-RVT

Protein Analysis

242

Amino Acids

25.46

Weight (kDa)

9.02

Isoelectric Point (pI)

26.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF568 PF04526 89 - 189 4.2e-24 Protein of unknown function (DUF568)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000204)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G04625 AT1G27220 AT1G27250 AT1G27870 AT1G47497 AT1G47497 AT1G50160 AT1G52990 AT1G52990 AT1G77815 AT2G02650 AT2G04420 AT2G11205 AT2G13980 AT2G33160 AT2G46460 AT3G09510 AT3G23320 AT3G25270 AT3G32130 AT4G03292 AT4G09775 AT5G26617 AT5G44470 AT5G52115 AT5G65005
fragaria_vesca FvH4_1g25222 FvH4_1g28481 FvH4_3g03751 FvH4_3g24081 FvH4_3g35341 FvH4_5g31961 FvH4_6g20891 FvH4_6g23253 FvH4_6g31361 FvH4_6g53051
malus_domestica MD14G1209300.v1.1
prunus_persica Prupe.1G168800_v2.0.a1 Prupe.1G509200_v2.0.a1 Prupe.2G042000_v2.0.a1 Prupe.2G133200_v2.0.a1 Prupe.2G140300_v2.0.a1 Prupe.3G103800_v2.0.a1 Prupe.4G217300_v2.0.a1 Prupe.4G245300_v2.0.a1 Prupe.5G002600_v2.0.a1 Prupe.5G134600_v2.0.a1 Prupe.6G185900_v2.0.a1 Prupe.6G308300_v2.0.a1 Prupe.7G010700_v2.0.a1 Prupe.8G078100_v2.0.a1 Prupe.8G128400_v2.0.a1
pyrus_communis pycom01g14230 pycom03g12410 pycom08g15160 pycom08g21670 pycom10g25730 pycom10g25740 pycom11g15380 pycom14g10440 pycom14g11510 pycom15g31840 pycom16g02370
rosa_chinensis RchiOBHm_Chr4g0440421 RchiOBHm_Chr5g0005841 RchiOBHm_Chr6g0289481 RchiOBHm_Chr7g0218671
rosa_laevigata RLG00000011653 RLG00000031330 RLG00000031331 RLG00000032722
rosa_multiflora Rmu_co8243061.1_g000001 Rmu_sc0000470.1_g000036 Rmu_sc0000581.1_g000008 Rmu_sc0000666.1_g000017 Rmu_sc0000905.1_g000019 Rmu_sc0000976.1_g000013 Rmu_sc0001066.1_g000001 Rmu_sc0001103.1_g000007 Rmu_sc0001180.1_g000001 Rmu_sc0001643.1_g000034 Rmu_sc0001759.1_g000007 Rmu_sc0001850.1_g000051 Rmu_sc0001910.1_g000008 Rmu_sc0001981.1_g000015 Rmu_sc0001981.1_g000029 Rmu_sc0002209.1_g000015 Rmu_sc0002406.1_g000010 Rmu_sc0003743.1_g000002 Rmu_sc0006416.1_g000026 Rmu_sc0006513.1_g000006 Rmu_sc0006577.1_g000010 Rmu_sc0014652.1_g000001 Rmu_sc0016202.1_g000003
rosa_roxburghii Rroxscaffold_1G00001530 Rroxscaffold_1G00047250 Rroxscaffold_5G00340720 Rroxscaffold_7G00171110 Rroxscaffold_7G00177650
rosa_rugosa Rorug01G0044800 Rorug01G0204500 Rorug01G0224700 Rorug01G0267800 Rorug02G0038400 Rorug02G0107100 Rorug02G0180700 Rorug02G0363800 Rorug02G0374300 Rorug02G0491400 Rorug02G0491400 Rorug03G0104200 Rorug03G0109800 Rorug03G0334200 Rorug04G0007100 Rorug04G0061400.1 Rorug04G0080000 Rorug05G0152200 Rorug05G0188800 Rorug05G0234800 Rorug05G0239900 Rorug05G0284800 Rorug06G0044700 Rorug06G0205700 Rorug06G0266900 Rorug06G0440700 Rorug07G0037400 Rorug07G0192100 Rorug07G0196900 Rorug07G0237500 Rorug07G0336400.1 RorugPtG0002500.1
rosa_samantha Rh1BG014800 Rh1CG017500 Rh2CG332500 Rh3BG371800 Rh5AG046000 Rh5AG046100 Rh5BG044700 Rh5BG044800 Rh5BG248000 Rh5CG053600 Rh5CG053700 Rh5DG044500 Rh5DG044600 Rh6AG052800 Rh6AG315400 Rh6DG021400 Rh7AG409500
rosa_wichuraiana Rw3G007750 Rw3G018750 Rw4G008820 Rw5G004630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 469
AatII GACGTC 1 cut(s) 381
Acc36I ACCTGC 1 cut(s) 469
AccB1I GGYRCC 3 cut(s) 257, 308, 575
AccII CGCG 2 cut(s) 551, 617
AccIII TCCGGA 1 cut(s) 445
AciI CCGC 7 cut(s) 90, 129, 225, 405, 549, 612, 617
AclWI GGATC 1 cut(s) 239
AcoI YGGCCR 1 cut(s) 570
AcuI CTGAAG 1 cut(s) 100
AcvI CACGTG 1 cut(s) 676
AcyI GRCGYC 1 cut(s) 378
AfaI GTAC 2 cut(s) 554, 586
AfiI CCNNNNNNNGG 2 cut(s) 221, 228
AflIII ACRYGT 1 cut(s) 673
AgsI TTSAA 1 cut(s) 100
AhlI ACTAGT 1 cut(s) 605
AjnI CCWGG 3 cut(s) 236, 468, 487
AloI GAACNNNNNNTCC 2 cut(s) 95, 127
AluBI AGCT 3 cut(s) 147, 367, 400
AluI AGCT 3 cut(s) 147, 367, 400
Alw21I GWGCWC 1 cut(s) 402
Alw26I GTCTC 2 cut(s) 452, 563
AlwI GGATC 1 cut(s) 239
AlwNI CAGNNNCTG 1 cut(s) 123
Aor13HI TCCGGA 1 cut(s) 445
AoxI GGCC 3 cut(s) 240, 484, 570
ApaI GGGCCC 1 cut(s) 488
AspLEI GCGC 4 cut(s) 275, 395, 617, 649
AspS9I GGNCC 4 cut(s) 240, 484, 485, 703
AsuC2I CCSGG 2 cut(s) 270, 360
AsuHPI GGTGA 1 cut(s) 394
AvaII GGWCC 1 cut(s) 703
BaeGI GKGCMC 1 cut(s) 488
BanI GGYRCC 3 cut(s) 257, 308, 575
BanII GRGCYC 2 cut(s) 402, 488
BauI CACGAG 1 cut(s) 628
BbrPI CACGTG 1 cut(s) 676
BbsI GAAGAC 1 cut(s) 309
Bbv12I GWGCWC 1 cut(s) 402
BbvCI CCTCAGC 1 cut(s) 143
BccI CCATC 1 cut(s) 251
BceAI ACGGC 4 cut(s) 176, 271, 322, 523
BciT130I CCWGG 3 cut(s) 238, 470, 489
BclI TGATCA 1 cut(s) 318
BcnI CCSGG 2 cut(s) 270, 360
BcoDI GTCTC 2 cut(s) 452, 563
BcuI ACTAGT 1 cut(s) 605
BfaI CTAG 3 cut(s) 606, 621, 727
BfmI CTRYAG 1 cut(s) 343
BfoI RGCGCY 3 cut(s) 276, 396, 650
BfuAI ACCTGC 1 cut(s) 469
BisI GCNGC 4 cut(s) 226, 549, 613, 618
BlsI GCNGC 4 cut(s) 227, 550, 614, 619
Bme1390I CCNGG 5 cut(s) 238, 270, 360, 470, 489
Bme18I GGWCC 1 cut(s) 703
BmgT120I GGNCC 4 cut(s) 240, 484, 485, 703
BmiI GGNNCC 5 cut(s) 259, 310, 444, 486, 577
BmrFI CCNGG 5 cut(s) 238, 270, 360, 470, 489
BpiI GAAGAC 1 cut(s) 309
BpmI CTGGAG 1 cut(s) 510
Bpu10I CCTNAGC 1 cut(s) 143
BpuEI CTTGAG 3 cut(s) 261, 583, 673
BpuMI CCSGG 2 cut(s) 270, 360
BsaAI YACGTR 1 cut(s) 676
BsaHI GRCGYC 1 cut(s) 378
BsaI GGTCTC 1 cut(s) 563
BsaJI CCNNGG 3 cut(s) 237, 487, 706
BsaWI WCCGGW 1 cut(s) 445
BsaXI ACNNNNNCTCC 6 cut(s) 71, 101, 158, 188, 660, 690
Bsc4I CCNNNNNNNGG 2 cut(s) 221, 228
Bse118I RCCGGY 2 cut(s) 572, 578
Bse1I ACTGG 1 cut(s) 499
BseAI TCCGGA 1 cut(s) 445
BseBI CCWGG 3 cut(s) 238, 470, 489
BseDI CCNNGG 3 cut(s) 237, 487, 706
BseLI CCNNNNNNNGG 2 cut(s) 221, 228
BseMII CTCAG 2 cut(s) 83, 157
BseNI ACTGG 1 cut(s) 499
BseRI GAGGAG 6 cut(s) 11, 14, 17, 20, 127, 172
BseSI GKGCMC 1 cut(s) 488
BsgI GTGCAG 1 cut(s) 109
Bsh1236I CGCG 2 cut(s) 551, 617
BshFI GGCC 3 cut(s) 242, 486, 572
BshNI GGYRCC 3 cut(s) 257, 308, 575
BsiHKAI GWGCWC 1 cut(s) 402
BsiSI CCGG 6 cut(s) 222, 270, 360, 446, 573, 579
BsiWI CGTACG 1 cut(s) 552
BslFI GGGAC 3 cut(s) 398, 609, 724
BslI CCNNNNNNNGG 2 cut(s) 221, 228
BsmAI GTCTC 2 cut(s) 452, 563
BsmBI CGTCTC 1 cut(s) 452
BsmFI GGGAC 3 cut(s) 398, 609, 724
BsnI GGCC 3 cut(s) 242, 486, 572
Bso31I GGTCTC 1 cut(s) 563
Bsp120I GGGCCC 1 cut(s) 484
Bsp1286I GDGCHC 2 cut(s) 402, 488
Bsp13I TCCGGA 1 cut(s) 445
Bsp143I GATC 3 cut(s) 36, 231, 318
BspACI CCGC 7 cut(s) 90, 129, 225, 405, 549, 612, 617
BspANI GGCC 3 cut(s) 242, 486, 572
BspCNI CTCAG 2 cut(s) 82, 156
BspEI TCCGGA 1 cut(s) 445
BspFNI CGCG 2 cut(s) 551, 617
BspHI TCATGA 1 cut(s) 516
BspLI GGNNCC 5 cut(s) 259, 310, 444, 486, 577
BspMI ACCTGC 1 cut(s) 469
BspPI GGATC 1 cut(s) 239
BspQI GCTCTTC 1 cut(s) 431
BspT107I GGYRCC 3 cut(s) 257, 308, 575
BspTNI GGTCTC 1 cut(s) 563
BsrFI RCCGGY 2 cut(s) 572, 578
BsrI ACTGG 1 cut(s) 499
BssAI RCCGGY 2 cut(s) 572, 578
BssECI CCNNGG 3 cut(s) 237, 487, 706
BssMI GATC 3 cut(s) 36, 231, 318
BssNI GRCGYC 1 cut(s) 378
BssSI CACGAG 1 cut(s) 628
BssT1I CCWWGG 1 cut(s) 706
Bst2BI CACGAG 1 cut(s) 628
Bst2UI CCWGG 3 cut(s) 238, 470, 489
Bst4CI ACNGT 2 cut(s) 436, 557
Bst6I CTCTTC 2 cut(s) 431, 720
BstACI GRCGYC 1 cut(s) 378
BstBAI YACGTR 1 cut(s) 676
BstC8I GCNNGC 2 cut(s) 369, 574
BstDEI CTNAG 3 cut(s) 69, 143, 636
BstFNI CGCG 2 cut(s) 551, 617
BstH2I RGCGCY 3 cut(s) 276, 396, 650
BstHHI GCGC 4 cut(s) 275, 395, 617, 649
BstKTI GATC 3 cut(s) 39, 234, 321
BstMAI GTCTC 2 cut(s) 452, 563
BstMBI GATC 3 cut(s) 36, 231, 318
BstMWI GCNNNNNNNGC 2 cut(s) 203, 287
BstNI CCWGG 3 cut(s) 238, 470, 489
BstSCI CCNGG 5 cut(s) 236, 268, 358, 468, 487
BstSFI CTRYAG 1 cut(s) 343
BstSLI GKGCMC 1 cut(s) 488
BstUI CGCG 2 cut(s) 551, 617
BstV2I GAAGAC 1 cut(s) 309
BsuRI GGCC 3 cut(s) 242, 486, 572
BtgZI GCGATG 1 cut(s) 187
BveI ACCTGC 1 cut(s) 469
Cac8I GCNNGC 2 cut(s) 369, 574
CaiI CAGNNNCTG 1 cut(s) 123
CciI TCATGA 1 cut(s) 516
CfoI GCGC 4 cut(s) 275, 395, 617, 649
Cfr10I RCCGGY 2 cut(s) 572, 578
Cfr13I GGNCC 4 cut(s) 240, 484, 485, 703
CseI GACGC 1 cut(s) 469
CsiI ACCWGGT 1 cut(s) 468
Csp6I GTAC 2 cut(s) 553, 585
CviAII CATG 2 cut(s) 316, 517
CviQI GTAC 2 cut(s) 553, 585
DdeI CTNAG 3 cut(s) 69, 143, 636
DpnI GATC 3 cut(s) 38, 233, 320
DpnII GATC 3 cut(s) 36, 231, 318
EaeI YGGCCR 1 cut(s) 570
Eam1104I CTCTTC 2 cut(s) 431, 720
EarI CTCTTC 2 cut(s) 431, 720
EciI GGCGGA 1 cut(s) 79
Ecl136II GAGCTC 1 cut(s) 400
Eco130I CCWWGG 1 cut(s) 706
Eco24I GRGCYC 2 cut(s) 402, 488
Eco31I GGTCTC 1 cut(s) 563
Eco47I GGWCC 1 cut(s) 703
Eco53kI GAGCTC 1 cut(s) 400
Eco57I CTGAAG 1 cut(s) 100
Eco72I CACGTG 1 cut(s) 676
EcoICRI GAGCTC 1 cut(s) 400
EcoO109I RGGNCCY 1 cut(s) 485
EcoRII CCWGG 3 cut(s) 236, 468, 487
EcoT14I CCWWGG 1 cut(s) 706
EcoT38I GRGCYC 2 cut(s) 402, 488
ErhI CCWWGG 1 cut(s) 706
Esp3I CGTCTC 1 cut(s) 452
FaeI CATG 2 cut(s) 319, 520
FaiI YATR 4 cut(s) 162, 284, 317, 518
FalI AAGNNNNNCTT 2 cut(s) 356, 388
FaqI GGGAC 3 cut(s) 398, 609, 724
FatI CATG 2 cut(s) 315, 516
FbaI TGATCA 1 cut(s) 318
Fnu4HI GCNGC 4 cut(s) 226, 549, 613, 618
FriOI GRGCYC 2 cut(s) 402, 488
Fsp4HI GCNGC 4 cut(s) 226, 549, 613, 618
FspBI CTAG 3 cut(s) 606, 621, 727
GlaI GCGC 4 cut(s) 274, 394, 616, 648
GluI GCNGC 4 cut(s) 226, 549, 613, 618
GsuI CTGGAG 1 cut(s) 510
HaeII RGCGCY 3 cut(s) 276, 396, 650
HaeIII GGCC 3 cut(s) 242, 486, 572
HapII CCGG 6 cut(s) 222, 270, 360, 446, 573, 579
HgaI GACGC 1 cut(s) 469
HhaI GCGC 4 cut(s) 275, 395, 617, 649
Hin1I GRCGYC 1 cut(s) 378
Hin1II CATG 2 cut(s) 319, 520
Hin6I GCGC 4 cut(s) 273, 393, 615, 647
HinP1I GCGC 4 cut(s) 273, 393, 615, 647
HincII GTYRAC 1 cut(s) 496
HindII GTYRAC 1 cut(s) 496
HinfI GANTC 4 cut(s) 355, 492, 658, 712
HpaII CCGG 6 cut(s) 222, 270, 360, 446, 573, 579
HphI GGTGA 1 cut(s) 394
Hpy166II GTNNAC 1 cut(s) 496
Hpy188III TCNNGA 6 cut(s) 34, 100, 446, 517, 562, 662
Hpy8I GTNNAC 1 cut(s) 496
Hpy99I CGWCG 3 cut(s) 197, 380, 413
HpyAV CCTTC 5 cut(s) 124, 208, 382, 445, 659
HpyCH4III ACNGT 2 cut(s) 436, 557
HpyCH4IV ACGT 2 cut(s) 378, 675
HpyCH4V TGCA 1 cut(s) 126
HpyF10VI GCNNNNNNNGC 2 cut(s) 203, 287
HpyF3I CTNAG 3 cut(s) 69, 143, 636
HpySE526I ACGT 2 cut(s) 378, 675
Hsp92I GRCGYC 1 cut(s) 378
Hsp92II CATG 2 cut(s) 319, 520
HspAI GCGC 4 cut(s) 273, 393, 615, 647
Kpn2I TCCGGA 1 cut(s) 445
KroI GCCGGC 1 cut(s) 572
KroNI GCCGGC 1 cut(s) 574
Ksp22I TGATCA 1 cut(s) 318
Kzo9I GATC 3 cut(s) 36, 231, 318
LguI GCTCTTC 1 cut(s) 431
LmnI GCTCC 2 cut(s) 152, 644
MabI ACCWGGT 1 cut(s) 468
MaeI CTAG 3 cut(s) 606, 621, 727
MaeII ACGT 2 cut(s) 378, 675
MalI GATC 3 cut(s) 38, 233, 320
MboI GATC 3 cut(s) 36, 231, 318
MboII GAAGA 3 cut(s) 314, 418, 707
MhlI GDGCHC 2 cut(s) 402, 488
MlyI GAGTC 2 cut(s) 501, 706
MmeI TCCRAC 2 cut(s) 201, 528
MroI TCCGGA 1 cut(s) 445
MroNI GCCGGC 1 cut(s) 572
MseI TTAA 1 cut(s) 419
MslI CAYNNNNRTG 2 cut(s) 263, 314
MspI CCGG 6 cut(s) 222, 270, 360, 446, 573, 579
MspR9I CCNGG 5 cut(s) 238, 270, 360, 470, 489
MvaI CCWGG 3 cut(s) 238, 470, 489
MvnI CGCG 2 cut(s) 551, 617
MwoI GCNNNNNNNGC 2 cut(s) 203, 287
NaeI GCCGGC 1 cut(s) 574
NciI CCSGG 2 cut(s) 270, 360
NdeII GATC 3 cut(s) 36, 231, 318
NgoMIV GCCGGC 1 cut(s) 572
NlaIII CATG 2 cut(s) 319, 520
NlaIV GGNNCC 5 cut(s) 259, 310, 444, 486, 577
NmeAIII GCCGAG 2 cut(s) 26, 421
PagI TCATGA 1 cut(s) 516
PaqCI CACCTGC 1 cut(s) 469
PciSI GCTCTTC 1 cut(s) 431
PcsI WCGNNNNNNNCGW 1 cut(s) 375
PdiI GCCGGC 1 cut(s) 574
PfeI GAWTC 2 cut(s) 355, 658
Pfl23II CGTACG 1 cut(s) 552
PfoI TCCNGGA 1 cut(s) 358
PkrI GCNGC 4 cut(s) 227, 550, 614, 619
PleI GAGTC 2 cut(s) 500, 706
PmaCI CACGTG 1 cut(s) 676
PmlI CACGTG 1 cut(s) 676
PpsI GAGTC 2 cut(s) 500, 706
Ppu21I YACGTR 1 cut(s) 676
Psp124BI GAGCTC 1 cut(s) 402
Psp6I CCWGG 3 cut(s) 236, 468, 487
PspCI CACGTG 1 cut(s) 676
PspGI CCWGG 3 cut(s) 236, 468, 487
PspLI CGTACG 1 cut(s) 552
PspN4I GGNNCC 5 cut(s) 259, 310, 444, 486, 577
PspOMI GGGCCC 1 cut(s) 484
PspPI GGNCC 4 cut(s) 240, 484, 485, 703
PstNI CAGNNNCTG 1 cut(s) 123
RsaI GTAC 2 cut(s) 554, 586
RsaNI GTAC 2 cut(s) 553, 585
RseI CAYNNNNRTG 2 cut(s) 263, 314
SacI GAGCTC 1 cut(s) 402
SapI GCTCTTC 1 cut(s) 431
SaqAI TTAA 1 cut(s) 419
SatI GCNGC 4 cut(s) 226, 549, 613, 618
Sau3AI GATC 3 cut(s) 36, 231, 318
Sau96I GGNCC 4 cut(s) 240, 484, 485, 703
SchI GAGTC 2 cut(s) 501, 706
ScrFI CCNGG 5 cut(s) 238, 270, 360, 470, 489
SduI GDGCHC 2 cut(s) 402, 488
SexAI ACCWGGT 1 cut(s) 468
SfcI CTRYAG 1 cut(s) 343
SinI GGWCC 1 cut(s) 703
SmiMI CAYNNNNRTG 2 cut(s) 263, 314
SmlI CTYRAG 3 cut(s) 276, 562, 652
SmoI CTYRAG 3 cut(s) 276, 562, 652
SpeI ACTAGT 1 cut(s) 605
SsiI CCGC 7 cut(s) 90, 129, 225, 405, 549, 612, 617
SspMI CTAG 3 cut(s) 606, 621, 727
SstI GAGCTC 1 cut(s) 402
StyD4I CCNGG 5 cut(s) 236, 268, 358, 468, 487
StyI CCWWGG 1 cut(s) 706
TaaI ACNGT 2 cut(s) 436, 557
TaiI ACGT 2 cut(s) 381, 678
TaqI TCGA 2 cut(s) 330, 375
TauI GCSGC 4 cut(s) 228, 551, 615, 620
TfiI GAWTC 2 cut(s) 355, 658
Tru1I TTAA 1 cut(s) 419
Tru9I TTAA 1 cut(s) 419
TspDTI ATGAA 2 cut(s) 190, 533
TspGWI ACGGA 1 cut(s) 426
VpaK11BI GGWCC 1 cut(s) 703
XspI CTAG 3 cut(s) 606, 621, 727
ZraI GACGTC 1 cut(s) 379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.