FvH4_6g20891

Reverse transcriptase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000204
Physical Location & Seq
Forward (+)
14386193 .. 14390699
4507 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g20891.t1

Sequence Viewer

Length: 1728 bp
ATGGCTGGAGATAAGAAGCAAGACCATTCAGATGAAGATCGTTCACGTGAAGACCACACGTGTCCACCAGCTCTAAAAAAGAACCAACATTCTTCGAGTGCAAGAGCCGGCGGTTTAATTTCTCCAACAGCATTGGGGATCCCAACTTTCTCTTTGACCGAAACCCTCTCTCTTCTTCTCTCTGCATGGCTTCACTGGCTGTTATTTGCTTCCACTTTGCAATCCTTCTTGTCACTTGGCGTGCGCTACTCTTCCACGCCATTGTTTCTTGCTGTGCTGGAGATTTACTTCAAGATCTTGCCTCTCTGTCTAACCCTAGCTCTCATTATTACAGACCCGGTTCAGAGTGTCAATGGTCGTGTCTTAAATGCTATTGGGTTTCCATTGCGGTGGTCGTCTTTCGAGAGCTTTCAAGGCCCTTTTACTGTCACTATTGATGATAATGGTCCCCTTGATATCCATATCCCTAGGCACAACTCTGTGTTATCCATGAGTAAATACCAAAGGTGTTGTTTGGTTGGGAAAGTGTTTGGGGAACGGGTTTCCAAACATATGGGCCAAATCTTTGCTCTTCGCCATTGGACTCCTAGTTTTAACCATGCAAGGGATGAGCTTACCTCTTTGATTCTTTGGATTGGAACTAGTGTTCGTATTGATCCTGCTACATTAGACGGCTCAAGGTCTATGTATGCTAGGGTGTGTGTTGAAATGAATTTACTTGCGCCTTGGCCCTGTGCTATTAATTTGTTTCCTGATCCTGACTCTACTGATCACTCTGTTATTAATCTTAACTATGAAACCCTGCTTACTAGTGAACCTGCAGCTTTCCCTCCTCATGTCCTGCTTCCACAAGATATGTCTGATACTCTTCATCTTGATGTTATGCTTGTCTTCCTTCAGCCCAGATCAGCTCCTACTACTGATCAGGAAGTTCCTAGAGCTTCTGCTGAACCTAACTCTTCTAACCCTAACTCTCCGGGTTGGCAAAAGCTTGGAAAGGGATCCTTGATAGTCGACATTTACTTTGTCAAGGACTTCGGTGGATTGTTGGGGACGGCCAATGTTTTAGCTAATGGTCAATGGAACTTGTCTTCAGTCAGCTCCTTTCTAGATGCTGATACTATTGCCTCTATTACAACAATCCCTCTTCCTCTTTTTCCTACTCCGGATGAAGTTGTTTGGGGTCTTACTGGCCATGGAAAGTTTAGTATCAAATCGGCTTCTGACCTTCTTCAAGCTAATACTCTTCCGCACCTCCGGCAAAAACTTCTTAATTGCATGTGGAAATTCAATCTTCCTCCTAAAGTTCGCAATTCTGATGGTCTCCCAGTTCTTGCTACAAGCCAAAATCTTGGTCGGATGGACATTCTTCTTGCTGAGGCTGTTGCTCTCCATACTGCCCTGCAGCTGCTCACTACCTGCACTACTCAACCAATTATTGTAGAAGGAGACTCTAAGCTTCTCCTGAATGCATTCAATGGTCGTTGTCAGATTTCGTGGTACCTTAAAGTGCTAGTTCGAGATATCCAAGCTTTATCATCTCATTTTCAGTCTATTTCCTTTAAACATGTTTGGAGAGAAACAAACTTTCTAGCTGATAGTCTCGCTAAATTAGGACACTCTTGTACTAGTCCTCAGTTATGGGGTTCTTCTCTTTCTTTTTCCTCGGCTACCGCCTTCCAGCTTGATCTTTATGGGGGCGGGTGTGCGCAAGGGTTCTATTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_3

Protein Analysis

576

Amino Acids

63.23

Weight (kDa)

6.4

Isoelectric Point (pI)

41.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_3 PF13456 436 - 538 2.1e-19 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000204)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G04625 AT1G27220 AT1G27250 AT1G27870 AT1G47497 AT1G47497 AT1G50160 AT1G52990 AT1G52990 AT1G77815 AT2G02650 AT2G04420 AT2G11205 AT2G13980 AT2G33160 AT2G46460 AT3G09510 AT3G23320 AT3G25270 AT3G32130 AT4G03292 AT4G09775 AT5G26617 AT5G44470 AT5G52115 AT5G65005
fragaria_vesca FvH4_1g25222 FvH4_1g28481 FvH4_3g03751 FvH4_3g24081 FvH4_3g35341 FvH4_5g31961 FvH4_6g20891 FvH4_6g23253 FvH4_6g31361 FvH4_6g53051
malus_domestica MD14G1209300.v1.1
prunus_persica Prupe.1G168800_v2.0.a1 Prupe.1G509200_v2.0.a1 Prupe.2G042000_v2.0.a1 Prupe.2G133200_v2.0.a1 Prupe.2G140300_v2.0.a1 Prupe.3G103800_v2.0.a1 Prupe.4G217300_v2.0.a1 Prupe.4G245300_v2.0.a1 Prupe.5G002600_v2.0.a1 Prupe.5G134600_v2.0.a1 Prupe.6G185900_v2.0.a1 Prupe.6G308300_v2.0.a1 Prupe.7G010700_v2.0.a1 Prupe.8G078100_v2.0.a1 Prupe.8G128400_v2.0.a1
pyrus_communis pycom01g14230 pycom03g12410 pycom08g15160 pycom08g21670 pycom10g25730 pycom10g25740 pycom11g15380 pycom14g10440 pycom14g11510 pycom15g31840 pycom16g02370
rosa_chinensis RchiOBHm_Chr4g0440421 RchiOBHm_Chr5g0005841 RchiOBHm_Chr6g0289481 RchiOBHm_Chr7g0218671
rosa_laevigata RLG00000011653 RLG00000031330 RLG00000031331 RLG00000032722
rosa_multiflora Rmu_co8243061.1_g000001 Rmu_sc0000470.1_g000036 Rmu_sc0000581.1_g000008 Rmu_sc0000666.1_g000017 Rmu_sc0000905.1_g000019 Rmu_sc0000976.1_g000013 Rmu_sc0001066.1_g000001 Rmu_sc0001103.1_g000007 Rmu_sc0001180.1_g000001 Rmu_sc0001643.1_g000034 Rmu_sc0001759.1_g000007 Rmu_sc0001850.1_g000051 Rmu_sc0001910.1_g000008 Rmu_sc0001981.1_g000015 Rmu_sc0001981.1_g000029 Rmu_sc0002209.1_g000015 Rmu_sc0002406.1_g000010 Rmu_sc0003743.1_g000002 Rmu_sc0006416.1_g000026 Rmu_sc0006513.1_g000006 Rmu_sc0006577.1_g000010 Rmu_sc0014652.1_g000001 Rmu_sc0016202.1_g000003
rosa_roxburghii Rroxscaffold_1G00001530 Rroxscaffold_1G00047250 Rroxscaffold_5G00340720 Rroxscaffold_7G00171110 Rroxscaffold_7G00177650
rosa_rugosa Rorug01G0044800 Rorug01G0204500 Rorug01G0224700 Rorug01G0267800 Rorug02G0038400 Rorug02G0107100 Rorug02G0180700 Rorug02G0363800 Rorug02G0374300 Rorug02G0491400 Rorug02G0491400 Rorug03G0104200 Rorug03G0109800 Rorug03G0334200 Rorug04G0007100 Rorug04G0061400.1 Rorug04G0080000 Rorug05G0152200 Rorug05G0188800 Rorug05G0234800 Rorug05G0239900 Rorug05G0284800 Rorug06G0044700 Rorug06G0205700 Rorug06G0266900 Rorug06G0440700 Rorug07G0037400 Rorug07G0192100 Rorug07G0196900 Rorug07G0237500 Rorug07G0336400.1 RorugPtG0002500.1
rosa_samantha Rh1BG014800 Rh1CG017500 Rh2CG332500 Rh3BG371800 Rh5AG046000 Rh5AG046100 Rh5BG044700 Rh5BG044800 Rh5BG248000 Rh5CG053600 Rh5CG053700 Rh5DG044500 Rh5DG044600 Rh6AG052800 Rh6AG315400 Rh6DG021400 Rh7AG409500
rosa_wichuraiana Rw3G007750 Rw3G018750 Rw4G008820 Rw5G004630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1710
Acc36I ACCTGC 2 cut(s) 826, 1427
Acc65I GGTACC 1 cut(s) 1500
AccB1I GGYRCC 1 cut(s) 1500
AccI GTMKAC 1 cut(s) 1014
AccIII TCCGGA 1 cut(s) 1165
AciI CCGC 5 cut(s) 111, 388, 1250, 1674, 1701
AclWI GGATC 6 cut(s) 133, 146, 650, 749, 996, 1009
AcoI YGGCCR 2 cut(s) 1056, 1192
AcsI RAATTY 2 cut(s) 712, 1286
AcuI CTGAAG 2 cut(s) 881, 1077
AcvI CACGTG 2 cut(s) 47, 60
AfaI GTAC 2 cut(s) 1502, 1627
AfiI CCNNNNNNNGG 1 cut(s) 604
AflIII ACRYGT 3 cut(s) 57, 59, 1567
AgsI TTSAA 6 cut(s) 292, 413, 707, 1235, 1291, 1477
AhlI ACTAGT 3 cut(s) 641, 809, 1628
AloI GAACNNNNNNTCC 2 cut(s) 630, 662
Alw26I GTCTC 3 cut(s) 1328, 1443, 1607
AlwI GGATC 6 cut(s) 133, 146, 650, 749, 996, 1009
Aor13HI TCCGGA 1 cut(s) 1165
AoxI GGCC 5 cut(s) 415, 556, 728, 1056, 1192
ApeKI GCWGC 3 cut(s) 821, 1405, 1408
ApoI RAATTY 2 cut(s) 712, 1286
ArsI GACNNNNNNTTYG 4 cut(s) 1007, 1039, 1339, 1371
AseI ATTAAT 2 cut(s) 741, 783
Asp700I GAANNNNTTC 1 cut(s) 1472
Asp718I GGTACC 1 cut(s) 1500
AspA2I CCTAGG 1 cut(s) 467
AspLEI GCGC 3 cut(s) 246, 724, 1711
AspS9I GGNCC 4 cut(s) 416, 446, 556, 729
AsuC2I CCSGG 2 cut(s) 338, 978
AvaII GGWCC 1 cut(s) 446
AvrII CCTAGG 1 cut(s) 467
BalI TGGCCA 1 cut(s) 1194
BamHI GGATCC 2 cut(s) 138, 1001
BanI GGYRCC 1 cut(s) 1500
BbrPI CACGTG 2 cut(s) 47, 60
BbsI GAAGAC 3 cut(s) 57, 883, 1083
BbvCI CCTCAGC 1 cut(s) 1377
BbvI GCAGC 3 cut(s) 833, 1395, 1417
BccI CCATC 2 cut(s) 1313, 1354
BceAI ACGGC 2 cut(s) 688, 1071
BclI TGATCA 2 cut(s) 769, 922
BcnI CCSGG 2 cut(s) 338, 978
BcoDI GTCTC 3 cut(s) 1328, 1443, 1607
BcuI ACTAGT 3 cut(s) 641, 809, 1628
BfmI CTRYAG 2 cut(s) 819, 1403
BfuAI ACCTGC 2 cut(s) 826, 1427
BglII AGATCT 1 cut(s) 294
BisI GCNGC 3 cut(s) 822, 1406, 1409
BlnI CCTAGG 1 cut(s) 467
BlsI GCNGC 3 cut(s) 823, 1407, 1410
Bme1390I CCNGG 2 cut(s) 338, 978
Bme18I GGWCC 1 cut(s) 446
BmgT120I GGNCC 4 cut(s) 416, 446, 556, 729
BmiI GGNNCC 4 cut(s) 140, 448, 1003, 1502
BmrFI CCNGG 2 cut(s) 338, 978
BmrI ACTGGG 1 cut(s) 1322
BmsI GCATC 1 cut(s) 1102
BmuI ACTGGG 1 cut(s) 1322
BpiI GAAGAC 3 cut(s) 57, 883, 1083
BplI GAGNNNNNCTC 2 cut(s) 602, 634
BpmI CTGGAG 2 cut(s) 27, 299
Bpu10I CCTNAGC 1 cut(s) 1377
BpuEI CTTGAG 1 cut(s) 661
BpuMI CCSGG 2 cut(s) 338, 978
BsaAI YACGTR 2 cut(s) 47, 60
BsaBI GATNNNNATC 1 cut(s) 36
BsaI GGTCTC 1 cut(s) 1328
BsaJI CCNNGG 4 cut(s) 467, 725, 1195, 1665
BsaWI WCCGGW 1 cut(s) 1165
Bsc4I CCNNNNNNNGG 1 cut(s) 604
Bse118I RCCGGY 1 cut(s) 107
Bse1I ACTGG 3 cut(s) 200, 1195, 1328
Bse3DI GCAATG 1 cut(s) 383
Bse8I GATNNNNATC 1 cut(s) 36
BseAI TCCGGA 1 cut(s) 1165
BseDI CCNNGG 4 cut(s) 467, 725, 1195, 1665
BseGI GGATG 3 cut(s) 613, 1174, 1365
BseJI GATNNNNATC 1 cut(s) 36
BseLI CCNNNNNNNGG 1 cut(s) 604
BseMI GCAATG 1 cut(s) 383
BseMII CTCAG 2 cut(s) 1368, 1649
BseNI ACTGG 3 cut(s) 200, 1195, 1328
BseRI GAGGAG 1 cut(s) 822
BseXI GCAGC 3 cut(s) 833, 1395, 1417
BsgI GTGCAG 1 cut(s) 1405
BshFI GGCC 5 cut(s) 417, 558, 730, 1058, 1194
BshNI GGYRCC 1 cut(s) 1500
BsiSI CCGG 5 cut(s) 108, 338, 977, 1166, 1258
BslFI GGGAC 2 cut(s) 432, 1066
BslI CCNNNNNNNGG 1 cut(s) 604
BsmAI GTCTC 3 cut(s) 1328, 1443, 1607
BsmFI GGGAC 2 cut(s) 432, 1066
BsmI GAATGC 2 cut(s) 1472, 1474
BsnI GGCC 5 cut(s) 417, 558, 730, 1058, 1194
Bso31I GGTCTC 1 cut(s) 1328
Bsp13I TCCGGA 1 cut(s) 1165
Bsp19I CCATGG 1 cut(s) 1195
BspACI CCGC 5 cut(s) 111, 388, 1250, 1674, 1701
BspANI GGCC 5 cut(s) 417, 558, 730, 1058, 1194
BspCNI CTCAG 2 cut(s) 1369, 1648
BspEI TCCGGA 1 cut(s) 1165
BspLI GGNNCC 4 cut(s) 140, 448, 1003, 1502
BspMAI CTGCAG 2 cut(s) 823, 1407
BspMI ACCTGC 2 cut(s) 826, 1427
BspPI GGATC 6 cut(s) 133, 146, 650, 749, 996, 1009
BspQI GCTCTTC 1 cut(s) 576
BspT107I GGYRCC 1 cut(s) 1500
BspTNI GGTCTC 1 cut(s) 1328
BsrDI GCAATG 1 cut(s) 383
BsrFI RCCGGY 1 cut(s) 107
BsrI ACTGG 3 cut(s) 200, 1195, 1328
BssAI RCCGGY 1 cut(s) 107
BssECI CCNNGG 4 cut(s) 467, 725, 1195, 1665
BssT1I CCWWGG 3 cut(s) 467, 725, 1195
Bst4CI ACNGT 1 cut(s) 427
Bst6I CTCTTC 7 cut(s) 177, 256, 576, 873, 964, 1152, 1251
BstBAI YACGTR 2 cut(s) 47, 60
BstC8I GCNNGC 2 cut(s) 109, 242
BstDEI CTNAG 3 cut(s) 1377, 1455, 1635
BstDSI CCRYGG 1 cut(s) 1195
BstF5I GGATG 3 cut(s) 613, 1174, 1365
BstHHI GCGC 3 cut(s) 246, 724, 1711
BstMAI GTCTC 3 cut(s) 1328, 1443, 1607
BstMWI GCNNNNNNNGC 3 cut(s) 196, 414, 1258
BstNSI RCATGY 2 cut(s) 1282, 1571
BstSCI CCNGG 2 cut(s) 336, 976
BstSFI CTRYAG 2 cut(s) 819, 1403
BstV1I GCAGC 3 cut(s) 833, 1395, 1417
BstV2I GAAGAC 3 cut(s) 57, 883, 1083
BstX2I RGATCY 3 cut(s) 138, 294, 1001
BstXI CCANNNNNNTGG 3 cut(s) 390, 553, 1352
BstYI RGATCY 3 cut(s) 138, 294, 1001
BsuRI GGCC 5 cut(s) 417, 558, 730, 1058, 1194
BtgI CCRYGG 1 cut(s) 1195
BtsCI GGATG 3 cut(s) 613, 1174, 1365
BtsIMutI CAGTG 1 cut(s) 193
BveI ACCTGC 2 cut(s) 826, 1427
Cac8I GCNNGC 2 cut(s) 109, 242
CfoI GCGC 3 cut(s) 246, 724, 1711
Cfr10I RCCGGY 1 cut(s) 107
Cfr13I GGNCC 4 cut(s) 416, 446, 556, 729
Csp6I GTAC 2 cut(s) 1501, 1626
CviAII CATG 7 cut(s) 186, 490, 599, 836, 1196, 1279, 1568
CviQI GTAC 2 cut(s) 1501, 1626
DdeI CTNAG 3 cut(s) 1377, 1455, 1635
DraI TTTAAA 1 cut(s) 1564
EaeI YGGCCR 2 cut(s) 1056, 1192
Eam1104I CTCTTC 7 cut(s) 177, 256, 576, 873, 964, 1152, 1251
EarI CTCTTC 7 cut(s) 177, 256, 576, 873, 964, 1152, 1251
Eco130I CCWWGG 3 cut(s) 467, 725, 1195
Eco31I GGTCTC 1 cut(s) 1328
Eco32I GATATC 2 cut(s) 457, 1525
Eco47I GGWCC 1 cut(s) 446
Eco57I CTGAAG 2 cut(s) 881, 1077
Eco72I CACGTG 2 cut(s) 47, 60
EcoO109I RGGNCCY 1 cut(s) 416
EcoRV GATATC 2 cut(s) 457, 1525
EcoT14I CCWWGG 3 cut(s) 467, 725, 1195
EcoT22I ATGCAT 1 cut(s) 1474
ErhI CCWWGG 3 cut(s) 467, 725, 1195
FaeI CATG 7 cut(s) 189, 493, 602, 839, 1199, 1282, 1571
FalI AAGNNNNNCTT 2 cut(s) 989, 1021
FaqI GGGAC 2 cut(s) 432, 1066
FatI CATG 7 cut(s) 185, 489, 598, 835, 1195, 1278, 1567
FauI CCCGC 1 cut(s) 1694
FauNDI CATATG 1 cut(s) 552
FbaI TGATCA 2 cut(s) 769, 922
FblI GTMKAC 1 cut(s) 1014
Fnu4HI GCNGC 3 cut(s) 822, 1406, 1409
FokI GGATG 3 cut(s) 620, 1181, 1372
Fsp4HI GCNGC 3 cut(s) 822, 1406, 1409
FspI TGCGCA 1 cut(s) 1710
GlaI GCGC 3 cut(s) 245, 723, 1710
GluI GCNGC 3 cut(s) 822, 1406, 1409
GsuI CTGGAG 2 cut(s) 27, 299
HaeIII GGCC 5 cut(s) 417, 558, 730, 1058, 1194
HapII CCGG 5 cut(s) 108, 338, 977, 1166, 1258
HhaI GCGC 3 cut(s) 246, 724, 1711
Hin1II CATG 7 cut(s) 189, 493, 602, 839, 1199, 1282, 1571
Hin6I GCGC 3 cut(s) 244, 722, 1709
HinP1I GCGC 3 cut(s) 244, 722, 1709
HincII GTYRAC 1 cut(s) 1015
HindII GTYRAC 1 cut(s) 1015
HindIII AAGCTT 3 cut(s) 989, 1457, 1530
HinfI GANTC 4 cut(s) 583, 625, 761, 1451
HpaII CCGG 5 cut(s) 108, 338, 977, 1166, 1258
Hpy166II GTNNAC 4 cut(s) 44, 65, 815, 1015
Hpy188I TCNGA 7 cut(s) 31, 345, 862, 1225, 1318, 1359, 1491
Hpy8I GTNNAC 4 cut(s) 44, 65, 815, 1015
HpyAV CCTTC 5 cut(s) 235, 905, 1238, 1439, 1687
HpyCH4III ACNGT 1 cut(s) 427
HpyCH4IV ACGT 2 cut(s) 46, 59
HpyCH4V TGCA 9 cut(s) 101, 185, 220, 602, 821, 1278, 1405, 1422, 1472
HpyF10VI GCNNNNNNNGC 3 cut(s) 196, 414, 1258
HpyF3I CTNAG 3 cut(s) 1377, 1455, 1635
HpySE526I ACGT 2 cut(s) 46, 59
Hsp92II CATG 7 cut(s) 189, 493, 602, 839, 1199, 1282, 1571
HspAI GCGC 3 cut(s) 244, 722, 1709
Kpn2I TCCGGA 1 cut(s) 1165
KpnI GGTACC 1 cut(s) 1504
KroI GCCGGC 1 cut(s) 107
KroNI GCCGGC 1 cut(s) 109
Ksp22I TGATCA 2 cut(s) 769, 922
LguI GCTCTTC 1 cut(s) 576
LmnI GCTCC 2 cut(s) 916, 1106
Lsp1109I GCAGC 3 cut(s) 833, 1395, 1417
LweI GCATC 1 cut(s) 1102
MaeII ACGT 2 cut(s) 46, 59
MaeIII GTNAC 2 cut(s) 231, 427
MflI RGATCY 3 cut(s) 138, 294, 1001
MlsI TGGCCA 1 cut(s) 1194
MluCI AATT 8 cut(s) 117, 712, 742, 1273, 1286, 1312, 1434, 1610
MluNI TGGCCA 1 cut(s) 1194
MlyI GAGTC 3 cut(s) 577, 755, 1445
MmeI TCCRAC 2 cut(s) 149, 1337
Mox20I TGGCCA 1 cut(s) 1194
Mph1103I ATGCAT 1 cut(s) 1474
MroI TCCGGA 1 cut(s) 1165
MroNI GCCGGC 1 cut(s) 107
MroXI GAANNNNTTC 1 cut(s) 1472
MscI TGGCCA 1 cut(s) 1194
MseI TTAA 9 cut(s) 116, 365, 594, 741, 783, 789, 1272, 1506, 1563
MslI CAYNNNNRTG 3 cut(s) 30, 388, 876
Msp20I TGGCCA 1 cut(s) 1194
MspA1I CMGCKG 1 cut(s) 1408
MspI CCGG 5 cut(s) 108, 338, 977, 1166, 1258
MspR9I CCNGG 2 cut(s) 338, 978
Mva1269I GAATGC 2 cut(s) 1472, 1474
MwoI GCNNNNNNNGC 3 cut(s) 196, 414, 1258
NaeI GCCGGC 1 cut(s) 109
NciI CCSGG 2 cut(s) 338, 978
NcoI CCATGG 1 cut(s) 1195
NdeI CATATG 1 cut(s) 552
NgoMIV GCCGGC 1 cut(s) 107
NlaIII CATG 7 cut(s) 189, 493, 602, 839, 1199, 1282, 1571
NlaIV GGNNCC 4 cut(s) 140, 448, 1003, 1502
NmeAIII GCCGAG 1 cut(s) 1646
NmuCI GTSAC 2 cut(s) 231, 427
NsbI TGCGCA 1 cut(s) 1710
NsiI ATGCAT 1 cut(s) 1474
NspI RCATGY 2 cut(s) 1282, 1571
PciI ACATGT 1 cut(s) 1567
PciSI GCTCTTC 1 cut(s) 576
PctI GAATGC 2 cut(s) 1472, 1474
PdiI GCCGGC 1 cut(s) 109
PdmI GAANNNNTTC 1 cut(s) 1472
PfeI GAWTC 1 cut(s) 625
PkrI GCNGC 3 cut(s) 823, 1407, 1410
PleI GAGTC 3 cut(s) 577, 755, 1445
PmaCI CACGTG 2 cut(s) 47, 60
PmlI CACGTG 2 cut(s) 47, 60
PpsI GAGTC 3 cut(s) 577, 755, 1445
Ppu21I YACGTR 2 cut(s) 47, 60
PscI ACATGT 1 cut(s) 1567
PshBI ATTAAT 2 cut(s) 741, 783
PspCI CACGTG 2 cut(s) 47, 60
PspN4I GGNNCC 4 cut(s) 140, 448, 1003, 1502
PspPI GGNCC 4 cut(s) 416, 446, 556, 729
PstI CTGCAG 2 cut(s) 823, 1407
PsuI RGATCY 3 cut(s) 138, 294, 1001
PvuII CAGCTG 1 cut(s) 1408
RsaI GTAC 2 cut(s) 1502, 1627
RsaNI GTAC 2 cut(s) 1501, 1626
RseI CAYNNNNRTG 3 cut(s) 30, 388, 876
SalI GTCGAC 1 cut(s) 1013
SapI GCTCTTC 1 cut(s) 576
SaqAI TTAA 9 cut(s) 116, 365, 594, 741, 783, 789, 1272, 1506, 1563
SatI GCNGC 3 cut(s) 822, 1406, 1409
Sau96I GGNCC 4 cut(s) 416, 446, 556, 729
SchI GAGTC 3 cut(s) 577, 755, 1445
ScrFI CCNGG 2 cut(s) 338, 978
SfaNI GCATC 1 cut(s) 1102
SfcI CTRYAG 2 cut(s) 819, 1403
SinI GGWCC 1 cut(s) 446
SmiMI CAYNNNNRTG 3 cut(s) 30, 388, 876
SmlI CTYRAG 1 cut(s) 676
SmoI CTYRAG 1 cut(s) 676
SpeI ACTAGT 3 cut(s) 641, 809, 1628
Sse9I AATT 8 cut(s) 117, 712, 742, 1273, 1286, 1312, 1434, 1610
SsiI CCGC 5 cut(s) 111, 388, 1250, 1674, 1701
StyD4I CCNGG 2 cut(s) 336, 976
StyI CCWWGG 3 cut(s) 467, 725, 1195
TaaI ACNGT 1 cut(s) 427
TaiI ACGT 2 cut(s) 49, 62
TaqI TCGA 4 cut(s) 95, 402, 1014, 1519
TaqII GACCGA 1 cut(s) 173
TasI AATT 8 cut(s) 117, 712, 742, 1273, 1286, 1312, 1434, 1610
TatI WGTACW 1 cut(s) 1625
TfiI GAWTC 1 cut(s) 625
Tru1I TTAA 9 cut(s) 116, 365, 594, 741, 783, 789, 1272, 1506, 1563
Tru9I TTAA 9 cut(s) 116, 365, 594, 741, 783, 789, 1272, 1506, 1563
TscAI CASTG 1 cut(s) 200
TseFI GTSAC 2 cut(s) 231, 427
TseI GCWGC 3 cut(s) 821, 1405, 1408
Tsp45I GTSAC 2 cut(s) 231, 427
TspDTI ATGAA 5 cut(s) 48, 725, 810, 860, 1185
TspRI CASTG 1 cut(s) 200
VpaK11BI GGWCC 1 cut(s) 446
VspI ATTAAT 2 cut(s) 741, 783
XapI RAATTY 2 cut(s) 712, 1286
XbaI TCTAGA 1 cut(s) 1108
XceI RCATGY 2 cut(s) 1282, 1571
XmaJI CCTAGG 1 cut(s) 467
XmiI GTMKAC 1 cut(s) 1014
XmnI GAANNNNTTC 1 cut(s) 1472
Zsp2I ATGCAT 1 cut(s) 1474
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.