ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 1 - 82 | 1.8e-13 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 17 |
| AcsI | RAATTY | 1 cut(s) | 173 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 291, 292 |
| AgsI | TTSAA | 4 cut(s) | 98, 119, 302, 325 |
| AluBI | AGCT | 3 cut(s) | 88, 224, 311 |
| AluI | AGCT | 3 cut(s) | 88, 224, 311 |
| ApoI | RAATTY | 1 cut(s) | 173 |
| BccI | CCATC | 1 cut(s) | 48 |
| BfaI | CTAG | 1 cut(s) | 260 |
| BmsI | GCATC | 3 cut(s) | 70, 115, 176 |
| Bpu10I | CCTNAGC | 1 cut(s) | 307 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 291, 292 |
| BseGI | GGATG | 2 cut(s) | 59, 322 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 291, 292 |
| BseYI | CCCAGC | 1 cut(s) | 270 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 291, 292 |
| BspACI | CCGC | 1 cut(s) | 17 |
| Bst6I | CTCTTC | 1 cut(s) | 53 |
| BstDEI | CTNAG | 1 cut(s) | 307 |
| BstF5I | GGATG | 2 cut(s) | 59, 322 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 242 |
| BtsCI | GGATG | 2 cut(s) | 59, 322 |
| CviAII | CATG | 2 cut(s) | 46, 242 |
| CviJI | RGCY | 4 cut(s) | 88, 140, 224, 311 |
| CviKI_1 | RGCY | 4 cut(s) | 88, 140, 224, 311 |
| DdeI | CTNAG | 1 cut(s) | 307 |
| Eam1104I | CTCTTC | 1 cut(s) | 53 |
| EarI | CTCTTC | 1 cut(s) | 53 |
| Eco32I | GATATC | 1 cut(s) | 154 |
| EcoRV | GATATC | 1 cut(s) | 154 |
| FaeI | CATG | 2 cut(s) | 49, 245 |
| FaiI | YATR | 4 cut(s) | 47, 198, 243, 314 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 99, 131 |
| FatI | CATG | 2 cut(s) | 45, 241 |
| FokI | GGATG | 2 cut(s) | 66, 329 |
| FspBI | CTAG | 1 cut(s) | 260 |
| GsaI | CCCAGC | 1 cut(s) | 274 |
| Hin1II | CATG | 2 cut(s) | 49, 245 |
| Hpy188I | TCNGA | 3 cut(s) | 172, 331, 338 |
| Hpy188III | TCNNGA | 1 cut(s) | 23 |
| HpyAV | CCTTC | 1 cut(s) | 29 |
| HpyCH4V | TGCA | 2 cut(s) | 83, 245 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 242 |
| HpyF3I | CTNAG | 1 cut(s) | 307 |
| Hsp92II | CATG | 2 cut(s) | 49, 245 |
| LpnPI | CCDG | 5 cut(s) | 56, 74, 135, 256, 300 |
| LweI | GCATC | 3 cut(s) | 70, 115, 176 |
| MaeI | CTAG | 1 cut(s) | 260 |
| MboII | GAAGA | 1 cut(s) | 70 |
| MluCI | AATT | 3 cut(s) | 173, 231, 325 |
| MnlI | CCTC | 5 cut(s) | 44, 54, 130, 139, 213 |
| MseI | TTAA | 1 cut(s) | 230 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 242 |
| NlaIII | CATG | 2 cut(s) | 49, 245 |
| PspFI | CCCAGC | 1 cut(s) | 270 |
| SaqAI | TTAA | 1 cut(s) | 230 |
| SetI | ASST | 7 cut(s) | 90, 124, 226, 265, 308, 313, 336 |
| SfaNI | GCATC | 3 cut(s) | 70, 115, 176 |
| Sse9I | AATT | 3 cut(s) | 173, 231, 325 |
| SsiI | CCGC | 1 cut(s) | 17 |
| SspMI | CTAG | 1 cut(s) | 260 |
| TaqI | TCGA | 1 cut(s) | 156 |
| TasI | AATT | 3 cut(s) | 173, 231, 325 |
| Tru1I | TTAA | 1 cut(s) | 230 |
| Tru9I | TTAA | 1 cut(s) | 230 |
| XapI | RAATTY | 1 cut(s) | 173 |
| XspI | CTAG | 1 cut(s) | 260 |