ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 618 |
| AarI | CACCTGC | 1 cut(s) | 644 |
| Acc36I | ACCTGC | 1 cut(s) | 644 |
| AccI | GTMKAC | 1 cut(s) | 86 |
| AciI | CCGC | 1 cut(s) | 20 |
| AclWI | GGATC | 1 cut(s) | 551 |
| AcsI | RAATTY | 4 cut(s) | 308, 341, 620, 665 |
| AfaI | GTAC | 1 cut(s) | 489 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 218, 737 |
| AflIII | ACRYGT | 1 cut(s) | 89 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 629, 661 |
| AluBI | AGCT | 1 cut(s) | 434 |
| AluI | AGCT | 1 cut(s) | 434 |
| Alw21I | GWGCWC | 2 cut(s) | 126, 211 |
| Alw26I | GTCTC | 4 cut(s) | 103, 353, 520, 783 |
| AlwI | GGATC | 1 cut(s) | 551 |
| ApeKI | GCWGC | 1 cut(s) | 551 |
| ApoI | RAATTY | 4 cut(s) | 308, 341, 620, 665 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 250, 282 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 902 |
| AsuHPI | GGTGA | 1 cut(s) | 668 |
| AxyI | CCTNAGG | 1 cut(s) | 561 |
| Bbv12I | GWGCWC | 2 cut(s) | 126, 211 |
| BbvI | GCAGC | 1 cut(s) | 538 |
| BccI | CCATC | 3 cut(s) | 242, 387, 455 |
| BciVI | GTATCC | 1 cut(s) | 539 |
| BcoDI | GTCTC | 4 cut(s) | 103, 353, 520, 783 |
| BfaI | CTAG | 1 cut(s) | 449 |
| BfuAI | ACCTGC | 1 cut(s) | 644 |
| BfuI | GTATCC | 1 cut(s) | 539 |
| BisI | GCNGC | 1 cut(s) | 552 |
| BlsI | GCNGC | 1 cut(s) | 553 |
| BmiI | GGNNCC | 2 cut(s) | 567, 742 |
| BmrI | ACTGGG | 1 cut(s) | 431 |
| BmsI | GCATC | 3 cut(s) | 20, 53, 601 |
| BmuI | ACTGGG | 1 cut(s) | 431 |
| BoxI | GACNNNNGTC | 1 cut(s) | 47 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 517, 549 |
| BsaAI | YACGTR | 1 cut(s) | 491 |
| BsaI | GGTCTC | 2 cut(s) | 103, 783 |
| BsaJI | CCNNGG | 1 cut(s) | 142 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 218, 737 |
| Bse1I | ACTGG | 1 cut(s) | 426 |
| Bse21I | CCTNAGG | 1 cut(s) | 561 |
| BseDI | CCNNGG | 1 cut(s) | 142 |
| BseGI | GGATG | 2 cut(s) | 253, 257 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 218, 737 |
| BseNI | ACTGG | 1 cut(s) | 426 |
| BseRI | GAGGAG | 1 cut(s) | 219 |
| BseXI | GCAGC | 1 cut(s) | 538 |
| BsiHKAI | GWGCWC | 2 cut(s) | 126, 211 |
| BslFI | GGGAC | 2 cut(s) | 141, 361 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 218, 737 |
| BsmAI | GTCTC | 4 cut(s) | 103, 353, 520, 783 |
| BsmBI | CGTCTC | 1 cut(s) | 353 |
| BsmFI | GGGAC | 2 cut(s) | 141, 361 |
| Bso31I | GGTCTC | 2 cut(s) | 103, 783 |
| Bsp1286I | GDGCHC | 2 cut(s) | 126, 211 |
| Bsp143I | GATC | 1 cut(s) | 556 |
| BspACI | CCGC | 1 cut(s) | 20 |
| BspLI | GGNNCC | 2 cut(s) | 567, 742 |
| BspMI | ACCTGC | 1 cut(s) | 644 |
| BspPI | GGATC | 1 cut(s) | 551 |
| BspTNI | GGTCTC | 2 cut(s) | 103, 783 |
| BsrI | ACTGG | 1 cut(s) | 426 |
| BssECI | CCNNGG | 1 cut(s) | 142 |
| BssMI | GATC | 1 cut(s) | 556 |
| Bst4CI | ACNGT | 1 cut(s) | 165 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 17 |
| BstBAI | YACGTR | 1 cut(s) | 491 |
| BstDEI | CTNAG | 2 cut(s) | 561, 630 |
| BstF5I | GGATG | 2 cut(s) | 253, 257 |
| BstKTI | GATC | 1 cut(s) | 559 |
| BstMAI | GTCTC | 4 cut(s) | 103, 353, 520, 783 |
| BstMBI | GATC | 1 cut(s) | 556 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 17, 727 |
| BstNSI | RCATGY | 1 cut(s) | 93 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 47 |
| BstV1I | GCAGC | 1 cut(s) | 538 |
| Bsu36I | CCTNAGG | 1 cut(s) | 561 |
| BsuI | GTATCC | 1 cut(s) | 539 |
| BtsCI | GGATG | 2 cut(s) | 253, 257 |
| BveI | ACCTGC | 1 cut(s) | 644 |
| Csp6I | GTAC | 1 cut(s) | 488 |
| CviAII | CATG | 7 cut(s) | 40, 90, 213, 674, 815, 859, 895 |
| CviJI | RGCY | 3 cut(s) | 434, 730, 832 |
| CviKI_1 | RGCY | 3 cut(s) | 434, 730, 832 |
| CviQI | GTAC | 1 cut(s) | 488 |
| DdeI | CTNAG | 2 cut(s) | 561, 630 |
| DpnI | GATC | 1 cut(s) | 558 |
| DpnII | GATC | 1 cut(s) | 556 |
| Eco31I | GGTCTC | 2 cut(s) | 103, 783 |
| Eco32I | GATATC | 1 cut(s) | 71 |
| Eco81I | CCTNAGG | 1 cut(s) | 561 |
| EcoRV | GATATC | 1 cut(s) | 71 |
| Esp3I | CGTCTC | 1 cut(s) | 353 |
| FaeI | CATG | 7 cut(s) | 43, 93, 216, 677, 818, 862, 898 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 598, 630 |
| FaqI | GGGAC | 2 cut(s) | 141, 361 |
| FatI | CATG | 7 cut(s) | 39, 89, 212, 673, 814, 858, 894 |
| FauNDI | CATATG | 1 cut(s) | 298 |
| FblI | GTMKAC | 1 cut(s) | 86 |
| Fnu4HI | GCNGC | 1 cut(s) | 552 |
| FokI | GGATG | 2 cut(s) | 260, 264 |
| Fsp4HI | GCNGC | 1 cut(s) | 552 |
| FspBI | CTAG | 1 cut(s) | 449 |
| GluI | GCNGC | 1 cut(s) | 552 |
| Hin1II | CATG | 7 cut(s) | 43, 93, 216, 677, 818, 862, 898 |
| HinfI | GANTC | 1 cut(s) | 349 |
| HphI | GGTGA | 1 cut(s) | 668 |
| Hpy166II | GTNNAC | 2 cut(s) | 87, 584 |
| Hpy188I | TCNGA | 5 cut(s) | 32, 541, 697, 807, 849 |
| Hpy188III | TCNNGA | 2 cut(s) | 100, 449 |
| Hpy8I | GTNNAC | 2 cut(s) | 87, 584 |
| HpyAV | CCTTC | 3 cut(s) | 104, 579, 700 |
| HpyCH4III | ACNGT | 1 cut(s) | 165 |
| HpyCH4IV | ACGT | 3 cut(s) | 106, 389, 490 |
| HpyCH4V | TGCA | 3 cut(s) | 66, 335, 764 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 17, 727 |
| HpyF3I | CTNAG | 2 cut(s) | 561, 630 |
| HpySE526I | ACGT | 3 cut(s) | 106, 389, 490 |
| Hsp92II | CATG | 7 cut(s) | 43, 93, 216, 677, 818, 862, 898 |
| Kzo9I | GATC | 1 cut(s) | 556 |
| LmnI | GCTCC | 2 cut(s) | 206, 416 |
| LpnPI | CCDG | 5 cut(s) | 59, 341, 407, 615, 639 |
| Lsp1109I | GCAGC | 1 cut(s) | 538 |
| LweI | GCATC | 3 cut(s) | 20, 53, 601 |
| MaeI | CTAG | 1 cut(s) | 449 |
| MaeII | ACGT | 3 cut(s) | 106, 389, 490 |
| MaeIII | GTNAC | 3 cut(s) | 171, 625, 656 |
| MalI | GATC | 1 cut(s) | 558 |
| MboI | GATC | 1 cut(s) | 556 |
| MhlI | GDGCHC | 2 cut(s) | 126, 211 |
| MluCI | AATT | 6 cut(s) | 308, 341, 456, 620, 638, 665 |
| MlyI | GAGTC | 1 cut(s) | 343 |
| MnlI | CCTC | 7 cut(s) | 137, 187, 197, 322, 543, 643, 754 |
| MroXI | GAANNNNTTC | 1 cut(s) | 902 |
| MseI | TTAA | 5 cut(s) | 54, 189, 372, 662, 684 |
| MslI | CAYNNNNRTG | 1 cut(s) | 591 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 17, 727 |
| NdeI | CATATG | 1 cut(s) | 298 |
| NdeII | GATC | 1 cut(s) | 556 |
| NlaIII | CATG | 7 cut(s) | 43, 93, 216, 677, 818, 862, 898 |
| NlaIV | GGNNCC | 2 cut(s) | 567, 742 |
| NmeAIII | GCCGAG | 1 cut(s) | 156 |
| NmuCI | GTSAC | 1 cut(s) | 656 |
| NspI | RCATGY | 1 cut(s) | 93 |
| PaqCI | CACCTGC | 1 cut(s) | 644 |
| PciI | ACATGT | 1 cut(s) | 89 |
| PdmI | GAANNNNTTC | 1 cut(s) | 902 |
| PkrI | GCNGC | 1 cut(s) | 553 |
| PleI | GAGTC | 1 cut(s) | 343 |
| PpsI | GAGTC | 1 cut(s) | 343 |
| Ppu21I | YACGTR | 1 cut(s) | 491 |
| PscI | ACATGT | 1 cut(s) | 89 |
| PshAI | GACNNNNGTC | 1 cut(s) | 47 |
| PsiI | TTATAA | 1 cut(s) | 618 |
| PspN4I | GGNNCC | 2 cut(s) | 567, 742 |
| RsaI | GTAC | 1 cut(s) | 489 |
| RsaNI | GTAC | 1 cut(s) | 488 |
| RseI | CAYNNNNRTG | 1 cut(s) | 591 |
| SaqAI | TTAA | 5 cut(s) | 54, 189, 372, 662, 684 |
| SatI | GCNGC | 1 cut(s) | 552 |
| Sau3AI | GATC | 1 cut(s) | 556 |
| SchI | GAGTC | 1 cut(s) | 343 |
| SduI | GDGCHC | 2 cut(s) | 126, 211 |
| SfaNI | GCATC | 3 cut(s) | 20, 53, 601 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 591 |
| Sse9I | AATT | 6 cut(s) | 308, 341, 456, 620, 638, 665 |
| SsiI | CCGC | 1 cut(s) | 20 |
| SspMI | CTAG | 1 cut(s) | 449 |
| TaaI | ACNGT | 1 cut(s) | 165 |
| TaiI | ACGT | 3 cut(s) | 109, 392, 493 |
| TaqI | TCGA | 1 cut(s) | 101 |
| TaqII | GACCGA | 1 cut(s) | 156 |
| TasI | AATT | 6 cut(s) | 308, 341, 456, 620, 638, 665 |
| Tru1I | TTAA | 5 cut(s) | 54, 189, 372, 662, 684 |
| Tru9I | TTAA | 5 cut(s) | 54, 189, 372, 662, 684 |
| TseFI | GTSAC | 1 cut(s) | 656 |
| TseI | GCWGC | 1 cut(s) | 551 |
| Tsp45I | GTSAC | 1 cut(s) | 656 |
| TspDTI | ATGAA | 2 cut(s) | 831, 911 |
| TspGWI | ACGGA | 2 cut(s) | 377, 403 |
| XapI | RAATTY | 4 cut(s) | 308, 341, 620, 665 |
| XbaI | TCTAGA | 1 cut(s) | 448 |
| XceI | RCATGY | 1 cut(s) | 93 |
| XmiI | GTMKAC | 1 cut(s) | 86 |
| XmnI | GAANNNNTTC | 1 cut(s) | 902 |
| XspI | CTAG | 1 cut(s) | 449 |