histone deacetylation
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 550 |
| AciI | CCGC | 3 cut(s) | 5, 275, 433 |
| AclWI | GGATC | 1 cut(s) | 80 |
| AcsI | RAATTY | 1 cut(s) | 124 |
| AfaI | GTAC | 2 cut(s) | 73, 254 |
| AflIII | ACRYGT | 1 cut(s) | 548 |
| AgsI | TTSAA | 4 cut(s) | 214, 344, 398, 546 |
| AluBI | AGCT | 4 cut(s) | 134, 369, 491, 503 |
| AluI | AGCT | 4 cut(s) | 134, 369, 491, 503 |
| Alw26I | GTCTC | 2 cut(s) | 189, 541 |
| AlwI | GGATC | 1 cut(s) | 80 |
| ApeKI | GCWGC | 1 cut(s) | 488 |
| ApoI | RAATTY | 1 cut(s) | 124 |
| AsuHPI | GGTGA | 1 cut(s) | 359 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 264, 296 |
| BbvI | GCAGC | 1 cut(s) | 500 |
| BccI | CCATC | 1 cut(s) | 289 |
| BcoDI | GTCTC | 2 cut(s) | 189, 541 |
| BfaI | CTAG | 1 cut(s) | 269 |
| BfmI | CTRYAG | 1 cut(s) | 281 |
| BisI | GCNGC | 1 cut(s) | 489 |
| BlsI | GCNGC | 1 cut(s) | 490 |
| BmsI | GCATC | 1 cut(s) | 31 |
| Bsa29I | ATCGAT | 1 cut(s) | 496 |
| BsaWI | WCCGGW | 1 cut(s) | 471 |
| BseCI | ATCGAT | 1 cut(s) | 496 |
| BseXI | GCAGC | 1 cut(s) | 500 |
| Bsh1236I | CGCG | 1 cut(s) | 550 |
| BshVI | ATCGAT | 1 cut(s) | 496 |
| BsiSI | CCGG | 1 cut(s) | 472 |
| BsmAI | GTCTC | 2 cut(s) | 189, 541 |
| Bsp143I | GATC | 5 cut(s) | 85, 114, 240, 333, 493 |
| BspACI | CCGC | 3 cut(s) | 5, 275, 433 |
| BspDI | ATCGAT | 1 cut(s) | 496 |
| BspFNI | CGCG | 1 cut(s) | 550 |
| BspHI | TCATGA | 1 cut(s) | 117 |
| BspPI | GGATC | 1 cut(s) | 80 |
| BssMI | GATC | 5 cut(s) | 85, 114, 240, 333, 493 |
| Bst4CI | ACNGT | 3 cut(s) | 34, 64, 361 |
| Bst6I | CTCTTC | 1 cut(s) | 159 |
| BstC8I | GCNNGC | 1 cut(s) | 136 |
| BstFNI | CGCG | 1 cut(s) | 550 |
| BstKTI | GATC | 5 cut(s) | 88, 117, 243, 336, 496 |
| BstMAI | GTCTC | 2 cut(s) | 189, 541 |
| BstMBI | GATC | 5 cut(s) | 85, 114, 240, 333, 493 |
| BstSFI | CTRYAG | 1 cut(s) | 281 |
| BstUI | CGCG | 1 cut(s) | 550 |
| BstV1I | GCAGC | 1 cut(s) | 500 |
| Bsu15I | ATCGAT | 1 cut(s) | 496 |
| BsuTUI | ATCGAT | 1 cut(s) | 496 |
| Cac8I | GCNNGC | 1 cut(s) | 136 |
| CciI | TCATGA | 1 cut(s) | 117 |
| ClaI | ATCGAT | 1 cut(s) | 496 |
| Csp6I | GTAC | 2 cut(s) | 72, 253 |
| CviAII | CATG | 2 cut(s) | 118, 312 |
| CviJI | RGCY | 6 cut(s) | 134, 287, 299, 369, 491, 503 |
| CviKI_1 | RGCY | 6 cut(s) | 134, 287, 299, 369, 491, 503 |
| CviQI | GTAC | 2 cut(s) | 72, 253 |
| DpnI | GATC | 5 cut(s) | 87, 116, 242, 335, 495 |
| DpnII | GATC | 5 cut(s) | 85, 114, 240, 333, 493 |
| DraI | TTTAAA | 1 cut(s) | 130 |
| Eam1104I | CTCTTC | 1 cut(s) | 159 |
| EarI | CTCTTC | 1 cut(s) | 159 |
| EciI | GGCGGA | 1 cut(s) | 448 |
| Eco32I | GATATC | 2 cut(s) | 204, 326 |
| EcoRV | GATATC | 2 cut(s) | 204, 326 |
| EcoT22I | ATGCAT | 3 cut(s) | 46, 52, 220 |
| FaeI | CATG | 2 cut(s) | 121, 315 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 59, 91, 165, 197 |
| FatI | CATG | 2 cut(s) | 117, 311 |
| FauNDI | CATATG | 1 cut(s) | 46 |
| Fnu4HI | GCNGC | 1 cut(s) | 489 |
| Fsp4HI | GCNGC | 1 cut(s) | 489 |
| FspBI | CTAG | 1 cut(s) | 269 |
| GluI | GCNGC | 1 cut(s) | 489 |
| HapII | CCGG | 1 cut(s) | 472 |
| Hin1II | CATG | 2 cut(s) | 121, 315 |
| HincII | GTYRAC | 1 cut(s) | 477 |
| HindII | GTYRAC | 1 cut(s) | 477 |
| HindIII | AAGCTT | 1 cut(s) | 367 |
| HpaII | CCGG | 1 cut(s) | 472 |
| HphI | GGTGA | 1 cut(s) | 359 |
| Hpy166II | GTNNAC | 2 cut(s) | 20, 477 |
| Hpy188III | TCNNGA | 4 cut(s) | 89, 118, 194, 292 |
| Hpy8I | GTNNAC | 2 cut(s) | 20, 477 |
| HpyAV | CCTTC | 3 cut(s) | 5, 19, 338 |
| HpyCH4III | ACNGT | 3 cut(s) | 34, 64, 361 |
| HpyCH4V | TGCA | 5 cut(s) | 44, 50, 159, 218, 304 |
| Hsp92II | CATG | 2 cut(s) | 121, 315 |
| Kzo9I | GATC | 5 cut(s) | 85, 114, 240, 333, 493 |
| LpnPI | CCDG | 4 cut(s) | 102, 269, 340, 485 |
| Lsp1109I | GCAGC | 1 cut(s) | 500 |
| LweI | GCATC | 1 cut(s) | 31 |
| MaeI | CTAG | 1 cut(s) | 269 |
| MaeIII | GTNAC | 1 cut(s) | 526 |
| MalI | GATC | 5 cut(s) | 87, 116, 242, 335, 495 |
| MboI | GATC | 5 cut(s) | 85, 114, 240, 333, 493 |
| MboII | GAAGA | 1 cut(s) | 176 |
| MluCI | AATT | 2 cut(s) | 124, 141 |
| MluI | ACGCGT | 1 cut(s) | 548 |
| MnlI | CCTC | 3 cut(s) | 160, 256, 419 |
| Mph1103I | ATGCAT | 3 cut(s) | 46, 52, 220 |
| MseI | TTAA | 3 cut(s) | 66, 129, 183 |
| MslI | CAYNNNNRTG | 1 cut(s) | 263 |
| MspA1I | CMGCKG | 1 cut(s) | 491 |
| MspI | CCGG | 1 cut(s) | 472 |
| MvnI | CGCG | 1 cut(s) | 550 |
| NdeI | CATATG | 1 cut(s) | 46 |
| NdeII | GATC | 5 cut(s) | 85, 114, 240, 333, 493 |
| NlaIII | CATG | 2 cut(s) | 121, 315 |
| NsiI | ATGCAT | 3 cut(s) | 46, 52, 220 |
| PagI | TCATGA | 1 cut(s) | 117 |
| PkrI | GCNGC | 1 cut(s) | 490 |
| PvuII | CAGCTG | 1 cut(s) | 491 |
| RsaI | GTAC | 2 cut(s) | 73, 254 |
| RsaNI | GTAC | 2 cut(s) | 72, 253 |
| RseI | CAYNNNNRTG | 1 cut(s) | 263 |
| SaqAI | TTAA | 3 cut(s) | 66, 129, 183 |
| SatI | GCNGC | 1 cut(s) | 489 |
| Sau3AI | GATC | 5 cut(s) | 85, 114, 240, 333, 493 |
| SetI | ASST | 9 cut(s) | 77, 136, 171, 267, 349, 371, 411, 493, 505 |
| SfaNI | GCATC | 1 cut(s) | 31 |
| SfcI | CTRYAG | 1 cut(s) | 281 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 263 |
| Sse9I | AATT | 2 cut(s) | 124, 141 |
| SsiI | CCGC | 3 cut(s) | 5, 275, 433 |
| SspMI | CTAG | 1 cut(s) | 269 |
| TaaI | ACNGT | 3 cut(s) | 34, 64, 361 |
| TaqI | TCGA | 3 cut(s) | 193, 328, 496 |
| TasI | AATT | 2 cut(s) | 124, 141 |
| Tru1I | TTAA | 3 cut(s) | 66, 129, 183 |
| Tru9I | TTAA | 3 cut(s) | 66, 129, 183 |
| TseI | GCWGC | 1 cut(s) | 488 |
| TspDTI | ATGAA | 3 cut(s) | 68, 134, 392 |
| XapI | RAATTY | 1 cut(s) | 124 |
| XspI | CTAG | 1 cut(s) | 269 |
| Zsp2I | ATGCAT | 3 cut(s) | 46, 52, 220 |