Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0000204

Physical Location & Seq

Genomic Coordinates Reverse (-)

16355577 .. 16361300

Gene Structure 5724 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0192100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1218 bp

ATGGAGGAAGCGAAGCTGAAGCAATTGAAGCATTTCGTCGAGCAGTGCAAGTCCGATCCCTCCATTCTCGCCGATCCTTCGCTCTCCTTCTTCCGCGATTACCTCGAGAGTCTCGGTGCTACTGTGCCTTCATCTGCTGGCAAGAATGAGGATTCGAAACCGAGGAGCTATGTAGTGGAGGAGAGCGACGACGACATGTCGGAGGAGGCTGAGCCGGAGCAGGTTCATGTTCAGGAAGAAGAGGAAGAAGAGATAGTCGAATCTGATCTCGAGCTCGAAGGCGACATTGTGGAGCCTGACAATGAACCTCCTCAGAAGATGGGAGAAGCATCTGTTGAGGTCACTGAAGACAACCGTGATGCCTCGCAGGCGGCCAAGGGCAAAGCTATGGAGGCCATTTCAGAAGGTAACTTGGAGGAAGCCATTGAGCATCTCACTGAGGCAATTTTGCTCAATCCTACTTCGGCAATTATGTACGGCACCAGAGCCAGTGTGTACATCAAAATGAAAAAACCTAATGCTGCCATTCGTGATGCCAACGCTGCTTTGGAGATTAATCCCGACTCTGCGAAAGGCTACAAGTCTCGTGGCATAGCTCATTCAATGCTTGGTAATTGGGAAGAGGCTGCGAAGGATCTCCACTTGGCATCAAAGCTAGATTTTGATGAGGAAATAAGTGCCGTACTTAAGAAGGTTGAACCTAATGTACACAAGATCCAGGAACACCGTCGTAAGTATGATAGGCTTCGTAAGGAAAGAGAGGACAGAAAGATTGAGCGTGAGAGACAACGTCGCAAAGCTGAGGCGCAGGCTGCGTATGAGAAGGCTAAGAAGCAAGAGCAGTCGTCTTCTAGTAGAAGACCTGGAGGCTTTCCTGGTGGAATGCCTGGAGGTTTTCCAGGGGCAGGAGGGATGCCAGGTGGCTTTCCTGGGGCAGGAGGAATGCCAGGTGGCTTTCCAGGCGCAGGAGGAATGCCTGGAGGCTTTCCAGGCGCAGGAGGTGCGCCTGGAGGCTCTGGAGGAGGGGTTCCCGGAAATGTTGACTTCAGCAAAATATTAAATGACCCAGAACTGATGGCTGCATTTAGTGATCCAGAAGTTATGGCTGCTCTTCAAGATGTGATGAAGAACCCTGCTAATCTAGCAAAGCATCAAGCAAATCCTAAGGTGGCGCCTATAATTGCCAAGATGATGGGCAAATTTGGTGGACCGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004312 GO:0004316 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006575 GO:0006629 GO:0006631 GO:0006633 GO:0006725 GO:0006732 GO:0006760 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009987 GO:0016053 GO:0016491 GO:0016614 GO:0016616 GO:0016740 GO:0016746 GO:0016747 GO:0019752 GO:0030497 GO:0032787 GO:0034641 GO:0036094 GO:0042558 GO:0043436 GO:0043603 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046483 GO:0048037 GO:0050661 GO:0050662 GO:0051186 GO:0055114 GO:0071704 GO:0072330 GO:0097159 GO:1901265 GO:1901360 GO:1901363 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

adh_short

Protein Analysis

405

Amino Acids

43.55

Weight (kDa)

5.04

Isoelectric Point (pI)

59.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HipN	PF18253	3 - 43	1.9e-19	Hsp70-interacting protein N N-terminal domain
STI1-HOP_DP	PF17830	349 - 399	2.5e-13	STI1/HOP, DP domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000204)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04625 AT1G27220 AT1G27250 AT1G27870 AT1G47497 AT1G47497 AT1G50160 AT1G52990 AT1G52990 AT1G77815 AT2G02650 AT2G04420 AT2G11205 AT2G13980 AT2G33160 AT2G46460 AT3G09510 AT3G23320 AT3G25270 AT3G32130 AT4G03292 AT4G09775 AT5G26617 AT5G44470 AT5G52115 AT5G65005
fragaria_vesca	FvH4_1g25222 FvH4_1g28481 FvH4_3g03751 FvH4_3g24081 FvH4_3g35341 FvH4_5g31961 FvH4_6g20891 FvH4_6g23253 FvH4_6g31361 FvH4_6g53051
malus_domestica	MD14G1209300.v1.1
prunus_persica	Prupe.1G168800_v2.0.a1 Prupe.1G509200_v2.0.a1 Prupe.2G042000_v2.0.a1 Prupe.2G133200_v2.0.a1 Prupe.2G140300_v2.0.a1 Prupe.3G103800_v2.0.a1 Prupe.4G217300_v2.0.a1 Prupe.4G245300_v2.0.a1 Prupe.5G002600_v2.0.a1 Prupe.5G134600_v2.0.a1 Prupe.6G185900_v2.0.a1 Prupe.6G308300_v2.0.a1 Prupe.7G010700_v2.0.a1 Prupe.8G078100_v2.0.a1 Prupe.8G128400_v2.0.a1
pyrus_communis	pycom01g14230 pycom03g12410 pycom08g15160 pycom08g21670 pycom10g25730 pycom10g25740 pycom11g15380 pycom14g10440 pycom14g11510 pycom15g31840 pycom16g02370
rosa_chinensis	RchiOBHm_Chr4g0440421 RchiOBHm_Chr5g0005841 RchiOBHm_Chr6g0289481 RchiOBHm_Chr7g0218671
rosa_laevigata	RLG00000011653 RLG00000031330 RLG00000031331 RLG00000032722
rosa_multiflora	Rmu_co8243061.1_g000001 Rmu_sc0000470.1_g000036 Rmu_sc0000581.1_g000008 Rmu_sc0000666.1_g000017 Rmu_sc0000905.1_g000019 Rmu_sc0000976.1_g000013 Rmu_sc0001066.1_g000001 Rmu_sc0001103.1_g000007 Rmu_sc0001180.1_g000001 Rmu_sc0001643.1_g000034 Rmu_sc0001759.1_g000007 Rmu_sc0001850.1_g000051 Rmu_sc0001910.1_g000008 Rmu_sc0001981.1_g000015 Rmu_sc0001981.1_g000029 Rmu_sc0002209.1_g000015 Rmu_sc0002406.1_g000010 Rmu_sc0003743.1_g000002 Rmu_sc0006416.1_g000026 Rmu_sc0006513.1_g000006 Rmu_sc0006577.1_g000010 Rmu_sc0014652.1_g000001 Rmu_sc0016202.1_g000003
rosa_roxburghii	Rroxscaffold_1G00001530 Rroxscaffold_1G00047250 Rroxscaffold_5G00340720 Rroxscaffold_7G00171110 Rroxscaffold_7G00177650
rosa_rugosa	Rorug01G0044800 Rorug01G0204500 Rorug01G0224700 Rorug01G0267800 Rorug02G0038400 Rorug02G0107100 Rorug02G0180700 Rorug02G0363800 Rorug02G0374300 Rorug02G0491400 Rorug02G0491400 Rorug03G0104200 Rorug03G0109800 Rorug03G0334200 Rorug04G0007100 Rorug04G0061400.1 Rorug04G0080000 Rorug05G0152200 Rorug05G0188800 Rorug05G0234800 Rorug05G0239900 Rorug05G0284800 Rorug06G0044700 Rorug06G0205700 Rorug06G0266900 Rorug06G0440700 Rorug07G0037400 Rorug07G0192100 Rorug07G0196900 Rorug07G0237500 Rorug07G0336400.1 RorugPtG0002500.1
rosa_samantha	Rh1BG014800 Rh1CG017500 Rh2CG332500 Rh3BG371800 Rh5AG046000 Rh5AG046100 Rh5BG044700 Rh5BG044800 Rh5BG248000 Rh5CG053600 Rh5CG053700 Rh5DG044500 Rh5DG044600 Rh6AG052800 Rh6AG315400 Rh6DG021400 Rh7AG409500
rosa_wichuraiana	Rw3G007750 Rw3G018750 Rw4G008820 Rw5G004630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	211
AccB1I	GGYRCC	2 cut(s)	479, 1171
AccII	CGCG	1 cut(s)	96
AciI	CCGC	2 cut(s)	94, 371
AclWI	GGATC	5 cut(s)	50, 68, 642, 709, 1085
AcoI	YGGCCR	1 cut(s)	372
AcsI	RAATTY	1 cut(s)	1199
AcuI	CTGAAG	3 cut(s)	38, 366, 1030
AcyI	GRCGYC	1 cut(s)	1172
AfaI	GTAC	4 cut(s)	476, 497, 684, 708
AfiI	CCNNNNNNNGG	4 cut(s)	905, 935, 965, 995
AflII	CTTAAG	1 cut(s)	686
AflIII	ACRYGT	1 cut(s)	195
AgsI	TTSAA	4 cut(s)	28, 603, 698, 1115
AhdI	GACNNNNNGTC	1 cut(s)	196
AloI	GAACNNNNNNTCC	2 cut(s)	1011, 1043
AluBI	AGCT	7 cut(s)	16, 168, 274, 386, 596, 655, 800
AluI	AGCT	7 cut(s)	16, 168, 274, 386, 596, 655, 800
Alw21I	GWGCWC	1 cut(s)	276
Alw26I	GTCTC	3 cut(s)	116, 588, 778
AlwI	GGATC	5 cut(s)	50, 68, 642, 709, 1085
Ama87I	CYCGRG	2 cut(s)	104, 269
AoxI	GGCC	2 cut(s)	372, 393
ApeKI	GCWGC	6 cut(s)	521, 542, 626, 812, 1079, 1106
ApoI	RAATTY	1 cut(s)	1199
AseI	ATTAAT	1 cut(s)	555
Asp700I	GAANNNNTTC	1 cut(s)	32
AspLEI	GCGC	5 cut(s)	808, 965, 995, 1006, 1174
AspS9I	GGNCC	1 cut(s)	1208
AsuC2I	CCSGG	1 cut(s)	1032
AsuII	TTCGAA	1 cut(s)	155
AvaI	CYCGRG	2 cut(s)	104, 269
AvaII	GGWCC	1 cut(s)	1208
AxyI	CCTNAGG	1 cut(s)	1164
BanI	GGYRCC	2 cut(s)	479, 1171
BanII	GRGCYC	1 cut(s)	276
BauI	CACGAG	1 cut(s)	585
BbsI	GAAGAC	3 cut(s)	354, 840, 865
Bbv12I	GWGCWC	1 cut(s)	276
BbvCI	CCTCAGC	1 cut(s)	801
BbvI	GCAGC	6 cut(s)	508, 529, 613, 799, 1066, 1093
BccI	CCATC	3 cut(s)	313, 1069, 1186
BceAI	ACGGC	2 cut(s)	493, 665
BcnI	CCSGG	1 cut(s)	1032
BcoDI	GTCTC	3 cut(s)	116, 588, 778
BfaI	CTAG	3 cut(s)	656, 852, 1142
BfoI	RGCGCY	1 cut(s)	1175
BfrI	CTTAAG	1 cut(s)	686
BfuAI	ACCTGC	1 cut(s)	211
BglI	GCCNNNNNGGC	1 cut(s)	368
BisI	GCNGC	7 cut(s)	372, 522, 543, 627, 813, 1080, 1107
BlpI	GCTNAGC	1 cut(s)	210
BlsI	GCNGC	7 cut(s)	373, 523, 544, 628, 814, 1081, 1108
Bme18I	GGWCC	1 cut(s)	1208
BmeRI	GACNNNNNGTC	1 cut(s)	196
BmeT110I	CYCGRG	2 cut(s)	104, 269
BmgT120I	GGNCC	1 cut(s)	1208
BmiI	GGNNCC	4 cut(s)	294, 481, 1029, 1173
BmsI	GCATC	7 cut(s)	338, 349, 439, 523, 656, 903, 1159
BpiI	GAAGAC	3 cut(s)	354, 840, 865
BpmI	CTGGAG	5 cut(s)	885, 909, 999, 1029, 1038
Bpu10I	CCTNAGC	1 cut(s)	801
Bpu1102I	GCTNAGC	1 cut(s)	210
Bpu14I	TTCGAA	1 cut(s)	155
BpuMI	CCSGG	1 cut(s)	1032
BsaHI	GRCGYC	1 cut(s)	1172
BsaJI	CCNNGG	4 cut(s)	161, 375, 899, 929
BsaXI	ACNNNNNCTCC	2 cut(s)	1011, 1041
Bsc4I	CCNNNNNNNGG	4 cut(s)	905, 935, 965, 995
Bse1I	ACTGG	1 cut(s)	489
Bse21I	CCTNAGG	1 cut(s)	1164
BseDI	CCNNGG	4 cut(s)	161, 375, 899, 929
BseGI	GGATG	1 cut(s)	918
BseLI	CCNNNNNNNGG	4 cut(s)	905, 935, 965, 995
BseMII	CTCAG	4 cut(s)	201, 326, 429, 792
BseNI	ACTGG	1 cut(s)	489
BseRI	GAGGAG	5 cut(s)	178, 194, 218, 300, 1035
BseXI	GCAGC	6 cut(s)	508, 529, 613, 799, 1066, 1093
Bsh1236I	CGCG	1 cut(s)	96
BshFI	GGCC	2 cut(s)	374, 395
BshNI	GGYRCC	2 cut(s)	479, 1171
BsiHKAI	GWGCWC	1 cut(s)	276
BsiHKCI	CYCGRG	2 cut(s)	104, 269
BsiSI	CCGG	2 cut(s)	215, 1032
BslI	CCNNNNNNNGG	4 cut(s)	905, 935, 965, 995
BsmAI	GTCTC	3 cut(s)	116, 588, 778
BsmI	GAATGC	3 cut(s)	888, 948, 978
BsnI	GGCC	2 cut(s)	374, 395
BsoBI	CYCGRG	2 cut(s)	104, 269
Bsp119I	TTCGAA	1 cut(s)	155
Bsp1286I	GDGCHC	1 cut(s)	276
Bsp1407I	TGTACA	2 cut(s)	495, 706
Bsp143I	GATC	6 cut(s)	55, 73, 265, 634, 714, 1090
Bsp1720I	GCTNAGC	1 cut(s)	210
BspACI	CCGC	2 cut(s)	94, 371
BspANI	GGCC	2 cut(s)	374, 395
BspCNI	CTCAG	4 cut(s)	202, 325, 430, 793
BspFNI	CGCG	1 cut(s)	96
BspLI	GGNNCC	4 cut(s)	294, 481, 1029, 1173
BspMI	ACCTGC	1 cut(s)	211
BspPI	GGATC	5 cut(s)	50, 68, 642, 709, 1085
BspQI	GCTCTTC	1 cut(s)	1116
BspT104I	TTCGAA	1 cut(s)	155
BspT107I	GGYRCC	2 cut(s)	479, 1171
BspTI	CTTAAG	1 cut(s)	686
BsrGI	TGTACA	2 cut(s)	495, 706
BsrI	ACTGG	1 cut(s)	489
BssECI	CCNNGG	4 cut(s)	161, 375, 899, 929
BssMI	GATC	6 cut(s)	55, 73, 265, 634, 714, 1090
BssNI	GRCGYC	1 cut(s)	1172
BssSI	CACGAG	1 cut(s)	585
BssT1I	CCWWGG	1 cut(s)	375
Bst2BI	CACGAG	1 cut(s)	585
Bst4CI	ACNGT	3 cut(s)	124, 356, 728
Bst6I	CTCTTC	4 cut(s)	234, 243, 615, 1116
BstACI	GRCGYC	1 cut(s)	1172
BstAFI	CTTAAG	1 cut(s)	686
BstAPI	GCANNNNNTGC	1 cut(s)	1001
BstAUI	TGTACA	2 cut(s)	495, 706
BstBI	TTCGAA	1 cut(s)	155
BstC8I	GCNNGC	3 cut(s)	139, 369, 810
BstDEI	CTNAG	6 cut(s)	210, 312, 438, 801, 828, 1164
BstENI	CCTNNNNNAGG	1 cut(s)	933
BstF5I	GGATG	1 cut(s)	918
BstFNI	CGCG	1 cut(s)	96
BstH2I	RGCGCY	1 cut(s)	1175
BstHHI	GCGC	5 cut(s)	808, 965, 995, 1006, 1174
BstKTI	GATC	6 cut(s)	58, 76, 268, 637, 717, 1093
BstMAI	GTCTC	3 cut(s)	116, 588, 778
BstMBI	GATC	6 cut(s)	55, 73, 265, 634, 714, 1090
BstMWI	GCNNNNNNNGC	9 cut(s)	28, 368, 392, 542, 812, 960, 990, 1001, 1142
BstNSI	RCATGY	1 cut(s)	199
BstUI	CGCG	1 cut(s)	96
BstV1I	GCAGC	6 cut(s)	508, 529, 613, 799, 1066, 1093
BstV2I	GAAGAC	3 cut(s)	354, 840, 865
BstX2I	RGATCY	2 cut(s)	634, 714
BstXI	CCANNNNNNTGG	1 cut(s)	1192
BstYI	RGATCY	2 cut(s)	634, 714
Bsu36I	CCTNAGG	1 cut(s)	1164
BsuRI	GGCC	2 cut(s)	374, 395
BtsCI	GGATG	1 cut(s)	918
BtsI	GCAGTG	1 cut(s)	50
BtsIMutI	CAGTG	4 cut(s)	50, 342, 435, 496
BveI	ACCTGC	1 cut(s)	211
Cac8I	GCNNGC	3 cut(s)	139, 369, 810
CfoI	GCGC	5 cut(s)	808, 965, 995, 1006, 1174
Cfr13I	GGNCC	1 cut(s)	1208
Csp6I	GTAC	4 cut(s)	475, 496, 683, 707
CspCI	CAANNNNNGTGG	3 cut(s)	568, 603, 1186
CviAII	CATG	2 cut(s)	196, 227
CviQI	GTAC	4 cut(s)	475, 496, 683, 707
DdeI	CTNAG	6 cut(s)	210, 312, 438, 801, 828, 1164
DinI	GGCGCC	1 cut(s)	1173
DpnI	GATC	6 cut(s)	57, 75, 267, 636, 716, 1092
DpnII	GATC	6 cut(s)	55, 73, 265, 634, 714, 1090
DriI	GACNNNNNGTC	1 cut(s)	196
EaeI	YGGCCR	1 cut(s)	372
Eam1104I	CTCTTC	4 cut(s)	234, 243, 615, 1116
Eam1105I	GACNNNNNGTC	1 cut(s)	196
EarI	CTCTTC	4 cut(s)	234, 243, 615, 1116
Ecl136II	GAGCTC	1 cut(s)	274
Eco130I	CCWWGG	1 cut(s)	375
Eco24I	GRGCYC	1 cut(s)	276
Eco47I	GGWCC	1 cut(s)	1208
Eco53kI	GAGCTC	1 cut(s)	274
Eco57I	CTGAAG	3 cut(s)	38, 366, 1030
Eco81I	CCTNAGG	1 cut(s)	1164
Eco88I	CYCGRG	2 cut(s)	104, 269
EcoICRI	GAGCTC	1 cut(s)	274
EcoNI	CCTNNNNNAGG	1 cut(s)	933
EcoT14I	CCWWGG	1 cut(s)	375
EcoT38I	GRGCYC	1 cut(s)	276
EgeI	GGCGCC	1 cut(s)	1173
EheI	GGCGCC	1 cut(s)	1173
ErhI	CCWWGG	1 cut(s)	375
FaeI	CATG	2 cut(s)	199, 230
FatI	CATG	2 cut(s)	195, 226
Fnu4HI	GCNGC	7 cut(s)	372, 522, 543, 627, 813, 1080, 1107
FokI	GGATG	1 cut(s)	925
FriOI	GRGCYC	1 cut(s)	276
Fsp4HI	GCNGC	7 cut(s)	372, 522, 543, 627, 813, 1080, 1107
FspBI	CTAG	3 cut(s)	656, 852, 1142
GlaI	GCGC	5 cut(s)	807, 964, 994, 1005, 1173
GluI	GCNGC	7 cut(s)	372, 522, 543, 627, 813, 1080, 1107
GsuI	CTGGAG	5 cut(s)	885, 909, 999, 1029, 1038
HaeII	RGCGCY	1 cut(s)	1175
HaeIII	GGCC	2 cut(s)	374, 395
HapII	CCGG	2 cut(s)	215, 1032
HhaI	GCGC	5 cut(s)	808, 965, 995, 1006, 1174
Hin1I	GRCGYC	1 cut(s)	1172
Hin1II	CATG	2 cut(s)	199, 230
Hin6I	GCGC	5 cut(s)	806, 963, 993, 1004, 1172
HinP1I	GCGC	5 cut(s)	806, 963, 993, 1004, 1172
HincII	GTYRAC	1 cut(s)	1042
HindII	GTYRAC	1 cut(s)	1042
HinfI	GANTC	4 cut(s)	109, 152, 260, 563
HpaII	CCGG	2 cut(s)	215, 1032
Hpy166II	GTNNAC	4 cut(s)	496, 709, 1042, 1208
Hpy188I	TCNGA	5 cut(s)	55, 202, 265, 315, 403
Hpy188III	TCNNGA	8 cut(s)	106, 233, 269, 530, 560, 1017, 1094, 1115
Hpy8I	GTNNAC	4 cut(s)	496, 709, 1042, 1208
Hpy99I	CGWCG	5 cut(s)	41, 191, 194, 732, 795
HpyAV	CCTTC	8 cut(s)	87, 97, 138, 272, 398, 625, 685, 817
HpyCH4III	ACNGT	3 cut(s)	124, 356, 728
HpyCH4IV	ACGT	1 cut(s)	790
HpyCH4V	TGCA	2 cut(s)	48, 1082
HpyF10VI	GCNNNNNNNGC	9 cut(s)	28, 368, 392, 542, 812, 960, 990, 1001, 1142
HpyF3I	CTNAG	6 cut(s)	210, 312, 438, 801, 828, 1164
HpySE526I	ACGT	1 cut(s)	790
Hsp92I	GRCGYC	1 cut(s)	1172
Hsp92II	CATG	2 cut(s)	199, 230
HspAI	GCGC	5 cut(s)	806, 963, 993, 1004, 1172
KasI	GGCGCC	1 cut(s)	1171
Kzo9I	GATC	6 cut(s)	55, 73, 265, 634, 714, 1090
LguI	GCTCTTC	1 cut(s)	1116
LmnI	GCTCC	3 cut(s)	165, 217, 292
Lsp1109I	GCAGC	6 cut(s)	508, 529, 613, 799, 1066, 1093
LweI	GCATC	7 cut(s)	338, 349, 439, 523, 656, 903, 1159
MaeI	CTAG	3 cut(s)	656, 852, 1142
MaeII	ACGT	1 cut(s)	790
MaeIII	GTNAC	2 cut(s)	340, 407
MalI	GATC	6 cut(s)	57, 75, 267, 636, 716, 1092
MboI	GATC	6 cut(s)	55, 73, 265, 634, 714, 1090
MfeI	CAATTG	1 cut(s)	23
MflI	RGATCY	2 cut(s)	634, 714
MhlI	GDGCHC	1 cut(s)	276
MluCI	AATT	6 cut(s)	23, 444, 468, 613, 1179, 1199
Mly113I	GGCGCC	1 cut(s)	1172
MlyI	GAGTC	2 cut(s)	118, 557
MmeI	TCCRAC	1 cut(s)	180
MroXI	GAANNNNTTC	1 cut(s)	32
MseI	TTAA	3 cut(s)	555, 687, 1058
MslI	CAYNNNNRTG	1 cut(s)	503
MspCI	CTTAAG	1 cut(s)	686
MspI	CCGG	2 cut(s)	215, 1032
MunI	CAATTG	1 cut(s)	23
Mva1269I	GAATGC	3 cut(s)	888, 948, 978
MvnI	CGCG	1 cut(s)	96
MwoI	GCNNNNNNNGC	9 cut(s)	28, 368, 392, 542, 812, 960, 990, 1001, 1142
NarI	GGCGCC	1 cut(s)	1172
NciI	CCSGG	1 cut(s)	1032
NdeII	GATC	6 cut(s)	55, 73, 265, 634, 714, 1090
NlaIII	CATG	2 cut(s)	199, 230
NlaIV	GGNNCC	4 cut(s)	294, 481, 1029, 1173
NmuCI	GTSAC	1 cut(s)	340
NspI	RCATGY	1 cut(s)	199
NspV	TTCGAA	1 cut(s)	155
PaeR7I	CTCGAG	2 cut(s)	104, 269
PciI	ACATGT	1 cut(s)	195
PciSI	GCTCTTC	1 cut(s)	1116
PctI	GAATGC	3 cut(s)	888, 948, 978
PdmI	GAANNNNTTC	1 cut(s)	32
PfeI	GAWTC	2 cut(s)	152, 260
PflFI	GACNNNGTC	1 cut(s)	789
PfoI	TCCNGGA	2 cut(s)	717, 1030
PkrI	GCNGC	7 cut(s)	373, 523, 544, 628, 814, 1081, 1108
PleI	GAGTC	2 cut(s)	117, 557
PluTI	GGCGCC	1 cut(s)	1175
PpsI	GAGTC	2 cut(s)	117, 557
PscI	ACATGT	1 cut(s)	195
PshBI	ATTAAT	1 cut(s)	555
Psp124BI	GAGCTC	1 cut(s)	276
PspN4I	GGNNCC	4 cut(s)	294, 481, 1029, 1173
PspPI	GGNCC	1 cut(s)	1208
PsrI	GAACNNNNNNTAC	2 cut(s)	690, 722
PsuI	RGATCY	2 cut(s)	634, 714
PsyI	GACNNNGTC	1 cut(s)	789
RsaI	GTAC	4 cut(s)	476, 497, 684, 708
RsaNI	GTAC	4 cut(s)	475, 496, 683, 707
RseI	CAYNNNNRTG	1 cut(s)	503
SacI	GAGCTC	1 cut(s)	276
SapI	GCTCTTC	1 cut(s)	1116
SaqAI	TTAA	3 cut(s)	555, 687, 1058
SatI	GCNGC	7 cut(s)	372, 522, 543, 627, 813, 1080, 1107
Sau3AI	GATC	6 cut(s)	55, 73, 265, 634, 714, 1090
Sau96I	GGNCC	1 cut(s)	1208
SchI	GAGTC	2 cut(s)	118, 557
SduI	GDGCHC	1 cut(s)	276
SfaNI	GCATC	7 cut(s)	338, 349, 439, 523, 656, 903, 1159
SfoI	GGCGCC	1 cut(s)	1173
Sfr274I	CTCGAG	2 cut(s)	104, 269
SfuI	TTCGAA	1 cut(s)	155
SinI	GGWCC	1 cut(s)	1208
SlaI	CTCGAG	2 cut(s)	104, 269
SmiMI	CAYNNNNRTG	1 cut(s)	503
SmlI	CTYRAG	3 cut(s)	104, 269, 686
SmoI	CTYRAG	3 cut(s)	104, 269, 686
Sse9I	AATT	6 cut(s)	23, 444, 468, 613, 1179, 1199
SsiI	CCGC	2 cut(s)	94, 371
SspDI	GGCGCC	1 cut(s)	1171
SspI	AATATT	1 cut(s)	1056
SspMI	CTAG	3 cut(s)	656, 852, 1142
SstI	GAGCTC	1 cut(s)	276
StyI	CCWWGG	1 cut(s)	375
TaaI	ACNGT	3 cut(s)	124, 356, 728
TaiI	ACGT	1 cut(s)	793
TaqI	TCGA	6 cut(s)	39, 105, 155, 258, 270, 276
TasI	AATT	6 cut(s)	23, 444, 468, 613, 1179, 1199
TatI	WGTACW	2 cut(s)	495, 706
TauI	GCSGC	1 cut(s)	374
TfiI	GAWTC	2 cut(s)	152, 260
Tru1I	TTAA	3 cut(s)	555, 687, 1058
Tru9I	TTAA	3 cut(s)	555, 687, 1058
TscAI	CASTG	4 cut(s)	50, 349, 442, 496
TseFI	GTSAC	1 cut(s)	340
TseI	GCWGC	6 cut(s)	521, 542, 626, 812, 1079, 1106
Tsp45I	GTSAC	1 cut(s)	340
TspDTI	ATGAA	5 cut(s)	120, 215, 318, 521, 1139
TspRI	CASTG	4 cut(s)	50, 349, 442, 496
Tth111I	GACNNNGTC	1 cut(s)	789
Vha464I	CTTAAG	1 cut(s)	686
VpaK11BI	GGWCC	1 cut(s)	1208
VspI	ATTAAT	1 cut(s)	555
XagI	CCTNNNNNAGG	1 cut(s)	933
XapI	RAATTY	1 cut(s)	1199
XceI	RCATGY	1 cut(s)	199
XcmI	CCANNNNNNNNNTGG	1 cut(s)	544
XhoI	CTCGAG	2 cut(s)	104, 269
XmnI	GAANNNNTTC	1 cut(s)	32
XspI	CTAG	3 cut(s)	656, 852, 1142

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.