Rmu_sc0006754.1_g000004

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006754.1
OG0000492
Physical Location & Seq
Forward (+)
19746 .. 26854
7109 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006754.1_g000004.1.cds

Sequence Viewer

Length: 2586 bp
atggagagagagctgtggttgttaatcttggaaaaacttggaggaggaagaagaagaagaattagaaagaagttgtctgggctgctaattggacgacggttagggctggagacgattgaggagatgacggtggagaagaagtgcagcggtgaggtcagaagaagccgtattgtgcaatacaaaggggggactgcagatttgtactccgacttggtgaaagctcgagcgattgcttgcagcgatgggctctcccggtgttgggaggtgtcgataggtggtacagctttccattacatgcttgcggtgatggcctgccctgctgatccgggtctgatccgaccacgcagaagacagttgaaagagcctgacaacgggtatgcagggttgaaggagattggcttttgttggttggtggatgagacaaaggatcagttctgttcctggaacaaggtggaggcgatctggctttcagacgcagtggcgggtcgactccaacttgcaagagcgatgcaattcgccttccgtacaagggcagtcggattcctgcagcctcaatttgtcggcgcggcgtggcacacaggtgatggtggcgacaccaaaccaggttgggtgcctagtttgggtgggatgctgaggcccatgttgagttggggctctgattccgtttgggccaaagcagctccactagcagatctgggctggagttgggctcccctgtgggccaaattgatgagttacaatctcctagggttccgcatttgggatcccggagatcttgatccaacaaaatatgtttcccttgacataagtagtaccattgaattttctggagtagtactgagagaggattcaaactattcagtaatggtggagtatgaaatgtcgaatgagtggatctatctctatgtaccaccctgggtactaccacattttcttgttctatctgtagatggcagcggaaagcaccgcgtgctaccaccagggcgccatgttcgcgctgcgccgcccatgccacacccaaggctcgctggcccgaccttgcgaaacgacacaccaccgcacatggcctactccgccgtgcaccaatctagagtcagaagacgccgcccagatctaccagatcttcaccgccacacgactccgcagaaccacaccgctgctccccatccccgtcgccactcagccctgaaaaggcaacgccgaatcttattaccatgcacaacactgactgcacccagagaatcgttcggacctcaccaccaccaccgtcaaaagcctgaagtgtcaacgtctctccccagaccaccccgagcaaatagcaatccccgtccagcaacagcccatttgtggcaaggcagaacctcaccgacttcgagcgccgccaaacgagcaaaattttcaaacctaggtttgttgggtgctccgggtggtcttggaattcggccagcagcttacttcaataaggctgctttgacaaaattaggctggaaagtgatctctgatcatgataactggtgggtggatattgttcgtaagaaatacttaagaaaacatgcttttttcatgcaaaataagcaggccaaccatcctatggcctggaaaggtatgcttgataatagagatcttttaatccaaggtatccgctggattgttggtaatggtactgacatcaaattctggactttcaactgggccttttcttttcctttgatcaatcttattttgactactaatagaatttctattgatatagatgagaatgttatattcctcttcctgctttggactcttgggatgaatttgtttgggggccgacctccagcagtattttttctgttaaatttgccacttggcttcaatgtgattcgctcaggggatgaggacttaaaccaccttttcttctcctgccccttcgctgcaaatgtttggcgctctgctggcattaccaatacagatttccaaaactttgaagaatggtttctttcctggttcaggaaggattaccaaaagtctactactgaaaatcttctccttctttgttggaaaatttgggaggcgaggaataacctcattttcagacattctccctctcttcctaacatggtggttcatgctgcggcatccattggtgagaattacaaaaggaataacccttgccttttcaaagtcctgcttctacctctcaagttatttgctggcttcctcctcctgctggcttcgccaagctcaatttcgatggttctgttgtcaacaataagaaagcagctgctggttttgttatcagggatcatgattgttctcccctttttactggtgcgagagctattggtcatgcttctgtccccattgctgaaggaagtgctgttcgtgatggtctttatcatgccctcctctttaactgtcgaaagctttatgtcgaaggctttccttcctctcaaattcaatggacgacccactgaagctccaggagttccgggtccagctctcacttccaggacaaccatagaagcccaagaacaattatgtactcaaaataagctcattcacaaattgaacataaccctctgcaattctctctggctgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-RVT

Protein Analysis

861

Amino Acids

97.5

Weight (kDa)

9.96

Isoelectric Point (pI)

49.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000492)

Species Orthologous Gene IDs
arabidopsis_thaliana ATMG01250
fragaria_vesca FvH4_1g20711 FvH4_3g24611 FvH4_3g24611 FvH4_3g24611 FvH4_3g24611 FvH4_3g24611 FvH4_3g24611 FvH4_3g24611 FvH4_3g24611 FvH4_3g24611 FvH4_3g24611 FvH4_3g24611 FvH4_3g28252 FvH4_3g31041 FvH4_4g00611 FvH4_5g15581 FvH4_5g21911 FvH4_5g35851 FvH4_6g24331 FvH4_6g34741
malus_domestica MD07G1291800.v1.1 MD09G1222500.v1.1
prunus_persica Prupe.1G162400_v2.0.a1 Prupe.1G210400_v2.0.a1 Prupe.6G308200_v2.0.a1
pyrus_communis pycom05g02580 pycom12g09210 pycom12g15310 pycom16g09140
rosa_chinensis RchiOBHm_Chr3g0484711 RchiOBHm_Chr4g0393411 RchiOBHm_Chr4g0397521 RchiOBHm_Chr4g0404571 RchiOBHm_Chr4g0418351 RchiOBHm_Chr5g0060311 RchiOBHm_Chr6g0301391 RchiOBHm_Chr7g0229871
rosa_laevigata RLG00000007836 RLG00000025145
rosa_multiflora Rmu_co8327795.1_g000001 Rmu_sc0000469.1_g000005 Rmu_sc0000498.1_g000050 Rmu_sc0000558.1_g000007 Rmu_sc0000693.1_g000082 Rmu_sc0000711.1_g000011 Rmu_sc0000814.1_g000039 Rmu_sc0001366.1_g000005 Rmu_sc0002205.1_g000004 Rmu_sc0002283.1_g000086 Rmu_sc0002406.1_g000011 Rmu_sc0002735.1_g000022 Rmu_sc0003545.1_g000004 Rmu_sc0004406.1_g000009 Rmu_sc0006301.1_g000009 Rmu_sc0006754.1_g000004 Rmu_sc0007324.1_g000010 Rmu_sc0008199.1_g000002 Rmu_sc0008563.1_g000009 Rmu_sc0009777.1_g000007 Rmu_sc0010560.1_g000011 Rmu_sc0011095.1_g000004 Rmu_sc0012101.1_g000004 Rmu_sc0014150.1_g000009 Rmu_sc0020270.1_g000004 Rmu_sc0021327.1_g000001 Rmu_sc0031326.1_g000003 Rmu_ssc0000116.1_g000050 Rmu_ssc0000368.1_g000056
rosa_roxburghii Rroxscaffold_2G00110080 Rroxscaffold_2G00141700 Rroxscaffold_2G00142400
rosa_rugosa Rorug01G0104400 Rorug01G0204500 Rorug02G0225600 Rorug02G0262000.1 Rorug02G0526700 Rorug03G0082000 Rorug03G0102500.1 Rorug04G0106400 Rorug04G0200200 Rorug05G0021900.1 Rorug05G0240000 Rorug05G0326500 Rorug05G0529200 Rorug07G0136100
rosa_samantha Rh1AG352100 Rh6DG494100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 610, 984
AccB7I CCANNNNNTGG 1 cut(s) 1591
AccI GTMKAC 2 cut(s) 487, 2012
AccII CGCG 3 cut(s) 566, 969, 996
AclWI GGATC 8 cut(s) 317, 328, 435, 758, 771, 773, 902, 2294
AcoI YGGCCR 1 cut(s) 1442
AcsI RAATTY 9 cut(s) 821, 1394, 1437, 1673, 1737, 1798, 1840, 2046, 2438
AcuI CTGAAG 3 cut(s) 1299, 2372, 2478
AcyI GRCGYC 2 cut(s) 985, 1102
AdeI CACNNNGTG 1 cut(s) 970
AfaI GTAC 9 cut(s) 203, 280, 526, 814, 837, 909, 921, 1663, 2527
AflII CTTAAG 1 cut(s) 1543
AjnI CCWGG 8 cut(s) 440, 601, 914, 979, 1595, 1985, 2464, 2492
AjuI GAANNNNNNNTTGG 4 cut(s) 1940, 1972, 2215, 2247
AleI CACNNNNGTG 1 cut(s) 579
AloI GAACNNNNNNTCC 2 cut(s) 2348, 2380
Alw21I GWGCWC 2 cut(s) 1083, 1423
Alw26I GTCTC 3 cut(s) 104, 413, 1296
Alw44I GTGCAC 1 cut(s) 1079
AlwI GGATC 8 cut(s) 317, 328, 435, 758, 771, 773, 902, 2294
AlwNI CAGNNNCTG 1 cut(s) 2269
Ama87I CYCGRG 2 cut(s) 222, 1308
ApaLI GTGCAC 1 cut(s) 1079
ApoI RAATTY 9 cut(s) 821, 1394, 1437, 1673, 1737, 1798, 1840, 2046, 2438
ArsI GACNNNNNNTTYG 2 cut(s) 181, 213
Asp700I GAANNNNTTC 3 cut(s) 1977, 2025, 2423
AspA2I CCTAGG 2 cut(s) 745, 1405
AspLEI GCGC 6 cut(s) 566, 987, 998, 1003, 1379, 1932
AspS9I GGNCC 8 cut(s) 636, 669, 720, 1031, 1250, 1692, 1810, 2477
AsuC2I CCSGG 5 cut(s) 253, 327, 768, 1425, 2475
AsuHPI GGTGA 8 cut(s) 161, 226, 316, 593, 1118, 1247, 1356, 2141
AvaI CYCGRG 2 cut(s) 222, 1308
AvaII GGWCC 2 cut(s) 1250, 2477
AvrII CCTAGG 2 cut(s) 745, 1405
BaeGI GKGCMC 1 cut(s) 1083
BamHI GGATCC 1 cut(s) 763
BanI GGYRCC 2 cut(s) 610, 984
BanII GRGCYC 3 cut(s) 249, 656, 712
BbsI GAAGAC 2 cut(s) 355, 1105
Bbv12I GWGCWC 2 cut(s) 1083, 1423
BbvCI CCTCAGC 1 cut(s) 632
BccI CCATC 8 cut(s) 236, 301, 578, 944, 1173, 1593, 2230, 2365
BceAI ACGGC 2 cut(s) 150, 1061
BciT130I CCWGG 8 cut(s) 442, 603, 916, 981, 1597, 1987, 2466, 2494
BciVI GTATCC 1 cut(s) 1649
BclI TGATCA 2 cut(s) 1501, 1710
BcnI CCSGG 5 cut(s) 253, 327, 768, 1425, 2475
BcoDI GTCTC 3 cut(s) 104, 413, 1296
BfaI CTAG 5 cut(s) 615, 686, 746, 1089, 1406
BfmI CTRYAG 3 cut(s) 192, 545, 945
BfoI RGCGCY 3 cut(s) 988, 1380, 1933
BfrI CTTAAG 1 cut(s) 1543
BfuI GTATCC 1 cut(s) 1649
BglII AGATCT 5 cut(s) 691, 772, 1111, 1120, 1621
BlnI CCTAGG 2 cut(s) 745, 1405
BmcAI AGTACT 1 cut(s) 837
Bme18I GGWCC 2 cut(s) 1250, 2477
BmeT110I CYCGRG 2 cut(s) 222, 1308
BmgT120I GGNCC 8 cut(s) 636, 669, 720, 1031, 1250, 1692, 1810, 2477
BmiI GGNNCC 7 cut(s) 612, 711, 752, 765, 986, 1811, 2478
BmrI ACTGGG 1 cut(s) 1699
BmsI GCATC 3 cut(s) 498, 618, 2129
BmuI ACTGGG 1 cut(s) 1699
BpiI GAAGAC 2 cut(s) 355, 1105
BplI GAGNNNNNCTC 2 cut(s) 694, 726
BpmI CTGGAG 5 cut(s) 128, 721, 849, 1803, 2448
Bpu10I CCTNAGC 2 cut(s) 632, 1870
BpuEI CTTGAG 1 cut(s) 2168
BpuMI CCSGG 5 cut(s) 253, 327, 768, 1425, 2475
BsaBI GATNNNNATC 1 cut(s) 777
BsaHI GRCGYC 2 cut(s) 985, 1102
BsaJI CCNNGG 7 cut(s) 745, 914, 915, 980, 1019, 1405, 1633
BsaXI ACNNNNNCTCC 6 cut(s) 125, 155, 1144, 1174, 2446, 2476
Bse1I ACTGG 3 cut(s) 1517, 1694, 2316
Bse3DI GCAATG 1 cut(s) 2345
Bse8I GATNNNNATC 1 cut(s) 777
BseBI CCWGG 8 cut(s) 442, 603, 916, 981, 1597, 1987, 2466, 2494
BseDI CCNNGG 7 cut(s) 745, 914, 915, 980, 1019, 1405, 1633
BseGI GGATG 7 cut(s) 421, 633, 1165, 1585, 1800, 1882, 2120
BseJI GATNNNNATC 1 cut(s) 777
BseMI GCAATG 1 cut(s) 2345
BseMII CTCAG 4 cut(s) 623, 830, 1194, 1884
BseNI ACTGG 3 cut(s) 1517, 1694, 2316
BseRI GAGGAG 4 cut(s) 57, 134, 2195, 2380
BseSI GKGCMC 1 cut(s) 1083
BsgI GTGCAG 2 cut(s) 163, 1215
Bsh1236I CGCG 3 cut(s) 566, 969, 996
BshNI GGYRCC 2 cut(s) 610, 984
BsiHKAI GWGCWC 2 cut(s) 1083, 1423
BsiHKCI CYCGRG 2 cut(s) 222, 1308
BsiSI CCGG 5 cut(s) 253, 326, 768, 1424, 2474
BslFI GGGAC 2 cut(s) 202, 2326
BsmAI GTCTC 3 cut(s) 104, 413, 1296
BsmBI CGTCTC 2 cut(s) 104, 1296
BsmFI GGGAC 2 cut(s) 202, 2326
BsoBI CYCGRG 2 cut(s) 222, 1308
Bsp1286I GDGCHC 5 cut(s) 249, 656, 712, 1083, 1423
BspCNI CTCAG 4 cut(s) 624, 831, 1193, 1883
BspFNI CGCG 3 cut(s) 566, 969, 996
BspHI TCATGA 2 cut(s) 1504, 2289
BspLI GGNNCC 7 cut(s) 612, 711, 752, 765, 986, 1811, 2478
BspMAI CTGCAG 2 cut(s) 196, 549
BspPI GGATC 8 cut(s) 317, 328, 435, 758, 771, 773, 902, 2294
BspT107I GGYRCC 2 cut(s) 610, 984
BspTI CTTAAG 1 cut(s) 1543
BsrDI GCAATG 1 cut(s) 2345
BsrI ACTGG 3 cut(s) 1517, 1694, 2316
BssECI CCNNGG 7 cut(s) 745, 914, 915, 980, 1019, 1405, 1633
BssNI GRCGYC 2 cut(s) 985, 1102
BssT1I CCWWGG 4 cut(s) 745, 1019, 1405, 1633
Bst2UI CCWGG 8 cut(s) 442, 603, 916, 981, 1597, 1987, 2466, 2494
Bst4CI ACNGT 5 cut(s) 99, 130, 354, 1268, 2401
Bst6I CTCTTC 2 cut(s) 1778, 2097
BstACI GRCGYC 2 cut(s) 985, 1102
BstAFI CTTAAG 1 cut(s) 1543
BstAPI GCANNNNNTGC 1 cut(s) 970
BstDEI CTNAG 4 cut(s) 632, 839, 1180, 1870
BstENI CCTNNNNNAGG 1 cut(s) 1990
BstF5I GGATG 7 cut(s) 421, 633, 1165, 1585, 1800, 1882, 2120
BstFNI CGCG 3 cut(s) 566, 969, 996
BstH2I RGCGCY 3 cut(s) 988, 1380, 1933
BstHHI GCGC 6 cut(s) 566, 987, 998, 1003, 1379, 1932
BstMAI GTCTC 3 cut(s) 104, 413, 1296
BstNI CCWGG 8 cut(s) 442, 603, 916, 981, 1597, 1987, 2466, 2494
BstNSI RCATGY 2 cut(s) 298, 1556
BstSFI CTRYAG 3 cut(s) 192, 545, 945
BstSLI GKGCMC 1 cut(s) 1083
BstUI CGCG 3 cut(s) 566, 969, 996
BstV2I GAAGAC 2 cut(s) 355, 1105
BstX2I RGATCY 7 cut(s) 691, 763, 772, 894, 1111, 1120, 1621
BstYI RGATCY 7 cut(s) 691, 763, 772, 894, 1111, 1120, 1621
BsuI GTATCC 1 cut(s) 1649
BtgZI GCGATG 2 cut(s) 255, 521
BtsCI GGATG 7 cut(s) 421, 633, 1165, 1585, 1800, 1882, 2120
BtsI GCAGTG 1 cut(s) 483
BtsIMutI CAGTG 3 cut(s) 483, 1223, 2454
CaiI CAGNNNCTG 1 cut(s) 2269
CciI TCATGA 2 cut(s) 1504, 2289
CfoI GCGC 6 cut(s) 566, 987, 998, 1003, 1379, 1932
Cfr13I GGNCC 8 cut(s) 636, 669, 720, 1031, 1250, 1692, 1810, 2477
CseI GACGC 2 cut(s) 482, 1110
CsiI ACCWGGT 1 cut(s) 601
Csp6I GTAC 9 cut(s) 202, 279, 525, 813, 836, 908, 920, 1662, 2526
CviQI GTAC 9 cut(s) 202, 279, 525, 813, 836, 908, 920, 1662, 2526
DdeI CTNAG 4 cut(s) 632, 839, 1180, 1870
DinI GGCGCC 1 cut(s) 986
DraIII CACNNNGTG 1 cut(s) 970
EaeI YGGCCR 1 cut(s) 1442
Eam1104I CTCTTC 2 cut(s) 1778, 2097
EarI CTCTTC 2 cut(s) 1778, 2097
EciI GGCGGA 1 cut(s) 1063
Eco130I CCWWGG 4 cut(s) 745, 1019, 1405, 1633
Eco24I GRGCYC 3 cut(s) 249, 656, 712
Eco47I GGWCC 2 cut(s) 1250, 2477
Eco57I CTGAAG 3 cut(s) 1299, 2372, 2478
Eco88I CYCGRG 2 cut(s) 222, 1308
EcoNI CCTNNNNNAGG 1 cut(s) 1990
EcoRI GAATTC 1 cut(s) 1437
EcoRII CCWGG 8 cut(s) 440, 601, 914, 979, 1595, 1985, 2464, 2492
EcoT14I CCWWGG 4 cut(s) 745, 1019, 1405, 1633
EcoT38I GRGCYC 3 cut(s) 249, 656, 712
EgeI GGCGCC 1 cut(s) 986
EheI GGCGCC 1 cut(s) 986
ErhI CCWWGG 4 cut(s) 745, 1019, 1405, 1633
Esp3I CGTCTC 2 cut(s) 104, 1296
FalI AAGNNNNNCTT 6 cut(s) 1526, 1558, 1593, 1625, 2157, 2189
FaqI GGGAC 2 cut(s) 202, 2326
FauI CCCGC 1 cut(s) 475
FbaI TGATCA 2 cut(s) 1501, 1710
FblI GTMKAC 2 cut(s) 487, 2012
FokI GGATG 7 cut(s) 428, 640, 1152, 1572, 1807, 1889, 2107
FriOI GRGCYC 3 cut(s) 249, 656, 712
FspBI CTAG 5 cut(s) 615, 686, 746, 1089, 1406
GlaI GCGC 6 cut(s) 565, 986, 997, 1002, 1378, 1931
GsuI CTGGAG 5 cut(s) 128, 721, 849, 1803, 2448
HaeII RGCGCY 3 cut(s) 988, 1380, 1933
HapII CCGG 5 cut(s) 253, 326, 768, 1424, 2474
HgaI GACGC 2 cut(s) 482, 1110
HhaI GCGC 6 cut(s) 566, 987, 998, 1003, 1379, 1932
Hin1I GRCGYC 2 cut(s) 985, 1102
Hin6I GCGC 6 cut(s) 564, 985, 996, 1001, 1377, 1930
HinP1I GCGC 6 cut(s) 564, 985, 996, 1001, 1377, 1930
HincII GTYRAC 3 cut(s) 488, 1287, 2250
HindII GTYRAC 3 cut(s) 488, 1287, 2250
HindIII AAGCTT 1 cut(s) 2407
HpaII CCGG 5 cut(s) 253, 326, 768, 1424, 2474
HphI GGTGA 8 cut(s) 161, 226, 316, 593, 1118, 1247, 1356, 2141
Hpy166II GTNNAC 5 cut(s) 488, 1081, 1287, 2013, 2250
Hpy188III TCNNGA 8 cut(s) 776, 828, 1089, 1505, 1678, 1993, 2290, 2368
Hpy8I GTNNAC 5 cut(s) 488, 1081, 1287, 2013, 2250
Hpy99I CGWCG 2 cut(s) 99, 1176
HpyAV CCTTC 8 cut(s) 382, 529, 1921, 1990, 2042, 2347, 2413, 2438
HpyCH4III ACNGT 5 cut(s) 99, 130, 354, 1268, 2401
HpyCH4IV ACGT 1 cut(s) 1289
HpyF3I CTNAG 4 cut(s) 632, 839, 1180, 1870
HpySE526I ACGT 1 cut(s) 1289
Hsp92I GRCGYC 2 cut(s) 985, 1102
HspAI GCGC 6 cut(s) 564, 985, 996, 1001, 1377, 1930
KasI GGCGCC 1 cut(s) 984
Ksp22I TGATCA 2 cut(s) 1501, 1710
LmnI GCTCC 5 cut(s) 685, 715, 1165, 1426, 2467
LweI GCATC 3 cut(s) 498, 618, 2129
MabI ACCWGGT 1 cut(s) 601
MaeI CTAG 5 cut(s) 615, 686, 746, 1089, 1406
MaeII ACGT 1 cut(s) 1289
MaeIII GTNAC 1 cut(s) 734
MflI RGATCY 7 cut(s) 691, 763, 772, 894, 1111, 1120, 1621
MhlI GDGCHC 5 cut(s) 249, 656, 712, 1083, 1423
Mly113I GGCGCC 1 cut(s) 985
MlyI GAGTC 4 cut(s) 483, 1101, 1132, 1780
MmeI TCCRAC 6 cut(s) 231, 361, 517, 517, 806, 2021
MroXI GAANNNNTTC 3 cut(s) 1977, 2025, 2423
MseI TTAA 6 cut(s) 23, 1544, 1628, 1838, 1886, 2396
MslI CAYNNNNRTG 1 cut(s) 579
MspA1I CMGCKG 5 cut(s) 147, 957, 1157, 1644, 2266
MspCI CTTAAG 1 cut(s) 1543
MspI CCGG 5 cut(s) 253, 326, 768, 1424, 2474
MteI GCGCNGCGC 1 cut(s) 999
MvaI CCWGG 8 cut(s) 442, 603, 916, 981, 1597, 1987, 2466, 2494
MvnI CGCG 3 cut(s) 566, 969, 996
NarI GGCGCC 1 cut(s) 985
NciI CCSGG 5 cut(s) 253, 327, 768, 1425, 2475
NlaIV GGNNCC 7 cut(s) 612, 711, 752, 765, 986, 1811, 2478
NspI RCATGY 2 cut(s) 298, 1556
OliI CACNNNNGTG 1 cut(s) 579
PaeR7I CTCGAG 1 cut(s) 222
PagI TCATGA 2 cut(s) 1504, 2289
PasI CCCWGGG 1 cut(s) 915
PdmI GAANNNNTTC 3 cut(s) 1977, 2025, 2423
PfeI GAWTC 6 cut(s) 540, 659, 848, 1203, 1241, 1864
PflMI CCANNNNNTGG 1 cut(s) 1591
PfoI TCCNGGA 4 cut(s) 440, 766, 2464, 2492
PleI GAGTC 4 cut(s) 483, 1100, 1132, 1780
PluTI GGCGCC 1 cut(s) 988
PpsI GAGTC 4 cut(s) 483, 1100, 1132, 1780
Psp6I CCWGG 8 cut(s) 440, 601, 914, 979, 1595, 1985, 2464, 2492
PspGI CCWGG 8 cut(s) 440, 601, 914, 979, 1595, 1985, 2464, 2492
PspN4I GGNNCC 7 cut(s) 612, 711, 752, 765, 986, 1811, 2478
PspPI GGNCC 8 cut(s) 636, 669, 720, 1031, 1250, 1692, 1810, 2477
PspXI VCTCGAGB 1 cut(s) 222
PstI CTGCAG 2 cut(s) 196, 549
PstNI CAGNNNCTG 1 cut(s) 2269
PsuI RGATCY 7 cut(s) 691, 763, 772, 894, 1111, 1120, 1621
PvuII CAGCTG 1 cut(s) 2266
RsaI GTAC 9 cut(s) 203, 280, 526, 814, 837, 909, 921, 1663, 2527
RsaNI GTAC 9 cut(s) 202, 279, 525, 813, 836, 908, 920, 1662, 2526
RseI CAYNNNNRTG 1 cut(s) 579
SalI GTCGAC 1 cut(s) 486
SaqAI TTAA 6 cut(s) 23, 1544, 1628, 1838, 1886, 2396
Sau96I GGNCC 8 cut(s) 636, 669, 720, 1031, 1250, 1692, 1810, 2477
ScaI AGTACT 1 cut(s) 837
SchI GAGTC 4 cut(s) 483, 1101, 1132, 1780
SduI GDGCHC 5 cut(s) 249, 656, 712, 1083, 1423
SexAI ACCWGGT 1 cut(s) 601
SfaNI GCATC 3 cut(s) 498, 618, 2129
SfcI CTRYAG 3 cut(s) 192, 545, 945
SfoI GGCGCC 1 cut(s) 986
Sfr274I CTCGAG 1 cut(s) 222
SinI GGWCC 2 cut(s) 1250, 2477
SlaI CTCGAG 1 cut(s) 222
SmiMI CAYNNNNRTG 1 cut(s) 579
SmlI CTYRAG 3 cut(s) 222, 1543, 2183
SmoI CTYRAG 3 cut(s) 222, 1543, 2183
SspDI GGCGCC 1 cut(s) 984
SspMI CTAG 5 cut(s) 615, 686, 746, 1089, 1406
StyI CCWWGG 4 cut(s) 745, 1019, 1405, 1633
TaaI ACNGT 5 cut(s) 99, 130, 354, 1268, 2401
TaiI ACGT 1 cut(s) 1292
TaqI TCGA 8 cut(s) 223, 269, 487, 884, 1373, 2234, 2403, 2417
TatI WGTACW 3 cut(s) 201, 835, 2525
TauI GCSGC 5 cut(s) 569, 1006, 1107, 1382, 2120
TfiI GAWTC 6 cut(s) 540, 659, 848, 1203, 1241, 1864
Tru1I TTAA 6 cut(s) 23, 1544, 1628, 1838, 1886, 2396
Tru9I TTAA 6 cut(s) 23, 1544, 1628, 1838, 1886, 2396
TscAI CASTG 3 cut(s) 483, 1230, 2461
TspDTI ATGAA 4 cut(s) 891, 1552, 1811, 2099
TspGWI ACGGA 2 cut(s) 512, 652
TspRI CASTG 3 cut(s) 483, 1230, 2461
Van91I CCANNNNNTGG 1 cut(s) 1591
Vha464I CTTAAG 1 cut(s) 1543
VneI GTGCAC 1 cut(s) 1079
VpaK11BI GGWCC 2 cut(s) 1250, 2477
XagI CCTNNNNNAGG 1 cut(s) 1990
XapI RAATTY 9 cut(s) 821, 1394, 1437, 1673, 1737, 1798, 1840, 2046, 2438
XbaI TCTAGA 1 cut(s) 1088
XceI RCATGY 2 cut(s) 298, 1556
XcmI CCANNNNNNNNNTGG 1 cut(s) 1588
XhoI CTCGAG 1 cut(s) 222
XmaJI CCTAGG 2 cut(s) 745, 1405
XmiI GTMKAC 2 cut(s) 487, 2012
XmnI GAANNNNTTC 3 cut(s) 1977, 2025, 2423
XspI CTAG 5 cut(s) 615, 686, 746, 1089, 1406
ZrmI AGTACT 1 cut(s) 837
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.