Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0006046

Physical Location & Seq

Genomic Coordinates Forward (+)

12903476 .. 12910992

Gene Structure 7517 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ43253

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

ATGGCGGTGCGAGCCGTCAGCACCTGCTCAATCTTCCGCTCCGCCTCTTCCCCTACTCTCTTCGCCTTCCGCTGCTGCCCGTGCCACTTCCAATTCCGCCGCTTCTCCAAATTAGGCATCCGCTTCCCGCTGTTTTGGTCCGACAAGCCCAGTCCCGGCCATGGCGGCGCTCAGAGAAGCTCCGTCCACAGCCTCGTCGATAGCGTCATGGAAGAGCTCCAATTCTTGCGCACAAAAAGAGTTCGCGCCTCCGCCAAGGTGGAACTCACAAGCAGTGGAGAGATACTAGAGGATAAGCTTGTGAACCGAACACTGCAAAAAGGGGTGCTGCTTGAGTTCAAGAAGGATGCGGAACGAGTATTGCTGGCTGTTGCTCAGAAACCCGATGGCAAGAAGAACTGGATGGTGTCCGATCAGAATGGTGTTACATCATCCATCAAACCACAACAAATTACATATATTGTTCCCGGTGTTGAAAATTTTGACCATGCAGAGATTTCAGACTTTATTCAGAAAGCTCGGGAAAACTTGGATCCAGCACTGCTAGAATTCGCTTGGGTTGAACTCCTTGAAAAGAATAAGCGGGTGAAGGTAGAAGAACTAGCAGAGATGATATTTGGTAGTACGAAAGGTTCTCGCTCTATATATGGACCTCGATCTGCTGAGCAGGTTGAGGAACTTCTACGTAGGAAGCTTGCAAAGGAGGCTGCTGAGAAAGAGCAGCAGGAGTTTGTAACCCTGCTGAAATCTGCGAAGGCTATGCCTTTAGATGCTAAACCTCCTAAATCTTCTTGGATGGTTGAAGAGAAAATCAAACACAGAATTGAGTCTCTTGAATGTTATGCTATTGATGACTGCAAAACCGATGACCAAAGGAAAACAGCTGGAACAATCTTAAAGGCAATGGGTATGGTGAAAACAGCATCATCAGCTCTGAATCTCCTCATAGATATTGGGTATTTCCCTGTACATGTGAATCTGGACTTGTTGAAGTTCAACATTCATACGGATCATTCAGATGAAGTTATATCAGCTGCAGAGAGTCTTCTGTTAGATCCATCAGATCCAGATGAGATTGAAAGGAAAGATCTCACTCACCTGAAGGTCTATGCCATTGATGTGGATGAGGCTGATGAGCTTGATGATGCCTTGAGTGCAACGAGGCTGCAAGATGGACACATTAAAATATGGATTCATGTTGCAGACCCGACTAGGCTTGTTCAACCTGGGAGCATACTAGACAGGGAGGCTATGAGAAGAGGAACTTCCGTCTTCTTGCCCACTGCTACTTATCCCATGTTCCCAGAAAAACTTGCCATGGAGGGAATGAGTTTGCAGCAAGGAGAGATTTGCAGTGCTGTTACAGTATCTGTTGTGCTGCACTCTGATGGCAGTATTGCAGAATATTCAGTGGACAACTCCATCATCAGACCAACATATATGCTAACGTATGAGAGTGCATCTGAGCTTCTTCATTTGAACCTGGAAGAAGAGTCTGAACTAAAAATGTTGTCTGAGGCCGCAACTCTCCGGAAAAAATGGCGTCGTGAACAGGGTGGCATTGACACAGCCACATTGGAAGCACGCATAAAAGTTGTGAATCCAGAGGATCCGGAGCCTGTAATAAATCTCTATGTTGAGGACCAGGCTGAACCTGCAATGCGACTGGTCTCTGAGATGATGATACTCTGTGGAGAAGTTATAGCTACTTTTGGTTGTAGCAATAACATTCCTTTACCATACAGGGGACAGCCCCAATCCAACATCGACACATCTGTATTTGCCCATCTTCCAGAAGGACCTGTTAGAAGCTCTGCCCTTGTCAAAATAATGCGTGCTGCTGAAATTGATTTCAGGAAACCTATACGCCATGGAATTTTAGGACTTCCTGGTTATGTTCAGTTTACATCTCCTATCCGCAGATATCTGGATCTACTAGCTCACTATCAGATCAAAGCATTTCTTATTGGAGATTCTCCTCCTTTCTCAGCTGGTCAGTTGGAAGGGATAGCGTCTATAGTGAACATGAATACTAGAGTAGCAAAGCGGCTCTTTAACAGCAGTCTGCGGTATTGGATATTAGAATATTTGAGAAGGCAGCCAAAAGAAAAAAGATTTCGTGCATTGATTCTTAGATTCATTAAGGATCGCATTGCAGCCATACTGTTAGTTGAGGTGGGACTTCAAGCATCTGTGTGGGTGTCTGTGGGATCACAAATTGGAGATGAAATTCTAGTTCGGGTAGAAGAAGCTCATCCACGTGATGATGTGCTTTTTCTCAAAGAGGTGGTCATTGATAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000175 GO:0000178 GO:0000932 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006364 GO:0006396 GO:0006401 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008408 GO:0009056 GO:0009057 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016072 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019439 GO:0022613 GO:0032991 GO:0034470 GO:0034641 GO:0034655 GO:0034660 GO:0035770 GO:0036464 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575 GO:1902494 GO:1905354 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RNB

Protein Analysis

767

Amino Acids

86.28

Weight (kDa)

6.1

Isoelectric Point (pI)

46.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CSD_RNase_II	PF23163	105 - 166	6.5e-28	CSD-like barrel domain
WHD_RNase_II	PF25255	168 - 210	7.7e-12	Ribonuclease II, winged helix domain
HTH_RNase_II	PF23161	224 - 327	1e-27	Double HTH domain
RNB	PF00773	361 - 655	1.2e-77	RNB domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006046)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02250
fragaria_vesca	FvH4_6g13600 FvH4_6g13600 FvH4_6g13600 FvH4_6g13600 FvH4_6g13600 FvH4_6g13600 FvH4_6g13600
malus_domestica	MD04G1129900.v1.1 MD12G1143000.v1.1
prunus_persica	Prupe.6G256600_v2.0.a1 Prupe.6G256600_v2.0.a1 Prupe.6G256600_v2.0.a1 Prupe.6G256600_v2.0.a1 Prupe.6G256600_v2.0.a1
pyrus_communis	pycom04g11820
rosa_chinensis	RchiOBHm_Chr3g0466451
rosa_laevigata	RLG00000024573
rosa_multiflora	Rmu_sc0036233.1_g000001
rosa_roxburghii	Rroxscaffold_1G00002460 Rroxscaffold_6G00414460
rosa_rugosa	Rorug03G0082000
rosa_samantha	Rh3AG128500 Rh3BG149900 Rh3DG150600
rosa_wichuraiana	Rw3G012140 Rw3G012150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	32
Acc16I	TGCGCA	1 cut(s)	230
Acc36I	ACCTGC	3 cut(s)	32, 658, 1663
AccBSI	CCGCTC	1 cut(s)	39
AccII	CGCG	1 cut(s)	246
AccIII	TCCGGA	2 cut(s)	1530, 1612
AcoI	YGGCCR	1 cut(s)	157
AcsI	RAATTY	4 cut(s)	478, 548, 1875, 2229
AcuI	CTGAAG	1 cut(s)	1121
AcvI	CACGTG	1 cut(s)	2261
AcyI	GRCGYC	1 cut(s)	1543
AfaI	GTAC	2 cut(s)	625, 969
AfiI	CCNNNNNNNGG	3 cut(s)	155, 161, 1745
AflIII	ACRYGT	1 cut(s)	970
AjnI	CCWGG	4 cut(s)	1225, 1482, 1644, 1888
Alw21I	GWGCWC	1 cut(s)	219
Alw26I	GTCTC	2 cut(s)	834, 1675
AlwNI	CAGNNNCTG	2 cut(s)	24, 1370
Ama87I	CYCGRG	1 cut(s)	519
Aor13HI	TCCGGA	2 cut(s)	1530, 1612
AoxI	GGCC	2 cut(s)	157, 1518
ApoI	RAATTY	4 cut(s)	478, 548, 1875, 2229
ArsI	GACNNNNNNTTYG	1 cut(s)	2274
AspLEI	GCGC	3 cut(s)	170, 231, 248
AspS9I	GGNCC	4 cut(s)	138, 650, 1642, 1799
AsuC2I	CCSGG	2 cut(s)	156, 468
AsuHPI	GGTGA	3 cut(s)	598, 925, 1088
AvaI	CYCGRG	1 cut(s)	519
AvaII	GGWCC	4 cut(s)	138, 650, 1642, 1799
BamHI	GGATCC	2 cut(s)	532, 1609
BanII	GRGCYC	1 cut(s)	219
BbrPI	CACGTG	1 cut(s)	2261
BbsI	GAAGAC	2 cut(s)	1037, 1264
Bbv12I	GWGCWC	1 cut(s)	219
BccI	CCATC	9 cut(s)	380, 397, 443, 790, 1066, 1166, 1382, 1430, 1794
BcgI	CGANNNNNNTGC	2 cut(s)	742, 776
BciT130I	CCWGG	4 cut(s)	1227, 1484, 1646, 1890
BcnI	CCSGG	2 cut(s)	156, 468
BcoDI	GTCTC	2 cut(s)	834, 1675
BfaI	CTAG	8 cut(s)	287, 545, 602, 1212, 1238, 1937, 2034, 2234
BfmI	CTRYAG	2 cut(s)	1035, 2016
BfoI	RGCGCY	1 cut(s)	171
BfuAI	ACCTGC	3 cut(s)	32, 658, 1663
BglI	GCCNNNNNGGC	1 cut(s)	165
BglII	AGATCT	1 cut(s)	1087
BlpI	GCTNAGC	1 cut(s)	663
Bme1390I	CCNGG	6 cut(s)	156, 468, 1227, 1484, 1646, 1890
Bme18I	GGWCC	4 cut(s)	138, 650, 1642, 1799
BmeT110I	CYCGRG	1 cut(s)	519
BmgT120I	GGNCC	4 cut(s)	138, 650, 1642, 1799
BmiI	GGNNCC	3 cut(s)	534, 1611, 1617
BmrFI	CCNGG	6 cut(s)	156, 468, 1227, 1484, 1646, 1890
BmrI	ACTGGG	1 cut(s)	144
BmsI	GCATC	7 cut(s)	126, 337, 760, 932, 1135, 1469, 2198
BmuI	ACTGGG	1 cut(s)	144
BpiI	GAAGAC	2 cut(s)	1037, 1264
Bpu1102I	GCTNAGC	1 cut(s)	663
BpuEI	CTTGAG	2 cut(s)	353, 1171
BpuMI	CCSGG	2 cut(s)	156, 468
BsaAI	YACGTR	2 cut(s)	686, 2261
BsaHI	GRCGYC	1 cut(s)	1543
BsaI	GGTCTC	1 cut(s)	1675
BsaJI	CCNNGG	5 cut(s)	160, 255, 1226, 1317, 1870
BsaWI	WCCGGW	2 cut(s)	1530, 1612
Bsc4I	CCNNNNNNNGG	3 cut(s)	155, 161, 1745
Bse1I	ACTGG	3 cut(s)	150, 404, 1671
Bse3DI	GCAATG	3 cut(s)	909, 1665, 2151
BseAI	TCCGGA	2 cut(s)	1530, 1612
BseBI	CCWGG	4 cut(s)	1227, 1484, 1646, 1890
BseDI	CCNNGG	5 cut(s)	160, 255, 1226, 1317, 1870
BseGI	GGATG	7 cut(s)	117, 352, 408, 431, 801, 1129, 2254
BseLI	CCNNNNNNNGG	3 cut(s)	155, 161, 1745
BseMI	GCAATG	3 cut(s)	909, 1665, 2151
BseMII	CTCAG	8 cut(s)	185, 389, 654, 702, 1455, 1506, 1665, 2001
BseNI	ACTGG	3 cut(s)	150, 404, 1671
BseRI	GAGGAG	2 cut(s)	932, 1968
BsgI	GTGCAG	1 cut(s)	1364
Bsh1236I	CGCG	1 cut(s)	246
BshFI	GGCC	2 cut(s)	159, 1520
BsiHKAI	GWGCWC	1 cut(s)	219
BsiHKCI	CYCGRG	1 cut(s)	519
BsiSI	CCGG	4 cut(s)	156, 468, 1531, 1613
BslFI	GGGAC	3 cut(s)	138, 1761, 2193
BslI	CCNNNNNNNGG	3 cut(s)	155, 161, 1745
BsmAI	GTCTC	2 cut(s)	834, 1675
BsmFI	GGGAC	3 cut(s)	138, 1761, 2193
BsnI	GGCC	2 cut(s)	159, 1520
Bso31I	GGTCTC	1 cut(s)	1675
BsoBI	CYCGRG	1 cut(s)	519
Bsp1286I	GDGCHC	1 cut(s)	219
Bsp13I	TCCGGA	2 cut(s)	1530, 1612
Bsp1407I	TGTACA	1 cut(s)	967
Bsp1720I	GCTNAGC	1 cut(s)	663
Bsp19I	CCATGG	3 cut(s)	160, 1317, 1870
BspANI	GGCC	2 cut(s)	159, 1520
BspCNI	CTCAG	8 cut(s)	184, 388, 655, 703, 1456, 1507, 1666, 2000
BspEI	TCCGGA	2 cut(s)	1530, 1612
BspFNI	CGCG	1 cut(s)	246
BspLI	GGNNCC	3 cut(s)	534, 1611, 1617
BspMAI	CTGCAG	1 cut(s)	1039
BspMI	ACCTGC	3 cut(s)	32, 658, 1663
BspQI	GCTCTTC	1 cut(s)	207
BspTNI	GGTCTC	1 cut(s)	1675
BsrBI	CCGCTC	1 cut(s)	39
BsrDI	GCAATG	3 cut(s)	909, 1665, 2151
BsrGI	TGTACA	1 cut(s)	967
BsrI	ACTGG	3 cut(s)	150, 404, 1671
BssECI	CCNNGG	5 cut(s)	160, 255, 1226, 1317, 1870
BssNI	GRCGYC	1 cut(s)	1543
BssT1I	CCWWGG	4 cut(s)	160, 255, 1317, 1870
Bst2UI	CCWGG	4 cut(s)	1227, 1484, 1646, 1890
Bst4CI	ACNGT	2 cut(s)	1366, 2166
Bst6I	CTCTTC	6 cut(s)	52, 65, 207, 798, 1252, 1485
BstACI	GRCGYC	1 cut(s)	1543
BstAUI	TGTACA	1 cut(s)	967
BstBAI	YACGTR	2 cut(s)	686, 2261
BstC8I	GCNNGC	5 cut(s)	12, 366, 696, 1585, 1836
BstDEI	CTNAG	9 cut(s)	171, 375, 663, 711, 1464, 1515, 1674, 1987, 2132
BstDSI	CCRYGG	3 cut(s)	160, 1317, 1870
BstF5I	GGATG	7 cut(s)	117, 352, 408, 431, 801, 1129, 2254
BstFNI	CGCG	1 cut(s)	246
BstH2I	RGCGCY	1 cut(s)	171
BstHHI	GCGC	3 cut(s)	170, 231, 248
BstMAI	GTCTC	2 cut(s)	834, 1675
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 81, 165, 704, 929, 1154, 1655
BstNI	CCWGG	4 cut(s)	1227, 1484, 1646, 1890
BstNSI	RCATGY	1 cut(s)	974
BstSCI	CCNGG	6 cut(s)	154, 466, 1225, 1482, 1644, 1888
BstSFI	CTRYAG	2 cut(s)	1035, 2016
BstSNI	TACGTA	1 cut(s)	686
BstUI	CGCG	1 cut(s)	246
BstV2I	GAAGAC	2 cut(s)	1037, 1264
BstX2I	RGATCY	6 cut(s)	532, 1054, 1063, 1087, 1609, 1930
BstXI	CCANNNNNNTGG	1 cut(s)	1120
BstYI	RGATCY	6 cut(s)	532, 1054, 1063, 1087, 1609, 1930
BsuRI	GGCC	2 cut(s)	159, 1520
BtgI	CCRYGG	3 cut(s)	160, 1317, 1870
BtsCI	GGATG	7 cut(s)	117, 352, 408, 431, 801, 1129, 2254
BtsI	GCAGTG	5 cut(s)	280, 311, 539, 1281, 1360
BtsIMutI	CAGTG	6 cut(s)	280, 311, 539, 1281, 1360, 1416
BveI	ACCTGC	3 cut(s)	32, 658, 1663
Cac8I	GCNNGC	5 cut(s)	12, 366, 696, 1585, 1836
CaiI	CAGNNNCTG	2 cut(s)	24, 1370
CfoI	GCGC	3 cut(s)	170, 231, 248
Cfr13I	GGNCC	4 cut(s)	138, 650, 1642, 1799
CseI	GACGC	3 cut(s)	193, 1532, 2001
Csp6I	GTAC	2 cut(s)	624, 968
CviAII	CATG	9 cut(s)	161, 208, 488, 971, 1196, 1297, 1318, 1871, 2026
CviQI	GTAC	2 cut(s)	624, 968
DdeI	CTNAG	9 cut(s)	171, 375, 663, 711, 1464, 1515, 1674, 1987, 2132
EaeI	YGGCCR	1 cut(s)	157
Eam1104I	CTCTTC	6 cut(s)	52, 65, 207, 798, 1252, 1485
EarI	CTCTTC	6 cut(s)	52, 65, 207, 798, 1252, 1485
EciI	GGCGGA	3 cut(s)	31, 86, 241
Ecl136II	GAGCTC	1 cut(s)	217
Eco105I	TACGTA	1 cut(s)	686
Eco130I	CCWWGG	4 cut(s)	160, 255, 1317, 1870
Eco24I	GRGCYC	1 cut(s)	219
Eco31I	GGTCTC	1 cut(s)	1675
Eco32I	GATATC	1 cut(s)	1925
Eco47I	GGWCC	4 cut(s)	138, 650, 1642, 1799
Eco53kI	GAGCTC	1 cut(s)	217
Eco57I	CTGAAG	1 cut(s)	1121
Eco72I	CACGTG	1 cut(s)	2261
Eco88I	CYCGRG	1 cut(s)	519
EcoICRI	GAGCTC	1 cut(s)	217
EcoO109I	RGGNCCY	1 cut(s)	1799
EcoRI	GAATTC	1 cut(s)	548
EcoRII	CCWGG	4 cut(s)	1225, 1482, 1644, 1888
EcoRV	GATATC	1 cut(s)	1925
EcoT14I	CCWWGG	4 cut(s)	160, 255, 1317, 1870
EcoT38I	GRGCYC	1 cut(s)	219
ErhI	CCWWGG	4 cut(s)	160, 255, 1317, 1870
FaeI	CATG	9 cut(s)	164, 211, 491, 974, 1199, 1300, 1321, 1874, 2029
FalI	AAGNNNNNCTT	6 cut(s)	1249, 1281, 1947, 1979, 2036, 2068
FaqI	GGGAC	3 cut(s)	138, 1761, 2193
FatI	CATG	9 cut(s)	160, 207, 487, 970, 1195, 1296, 1317, 1870, 2025
FauI	CCCGC	2 cut(s)	135, 576
FokI	GGATG	7 cut(s)	104, 359, 415, 418, 808, 1136, 2241
FriOI	GRGCYC	1 cut(s)	219
FspBI	CTAG	8 cut(s)	287, 545, 602, 1212, 1238, 1937, 2034, 2234
FspI	TGCGCA	1 cut(s)	230
GlaI	GCGC	3 cut(s)	169, 230, 247
HaeII	RGCGCY	1 cut(s)	171
HaeIII	GGCC	2 cut(s)	159, 1520
HapII	CCGG	4 cut(s)	156, 468, 1531, 1613
HgaI	GACGC	3 cut(s)	193, 1532, 2001
HhaI	GCGC	3 cut(s)	170, 231, 248
Hin1I	GRCGYC	1 cut(s)	1543
Hin1II	CATG	9 cut(s)	164, 211, 491, 974, 1199, 1300, 1321, 1874, 2029
Hin6I	GCGC	3 cut(s)	168, 229, 246
HinP1I	GCGC	3 cut(s)	168, 229, 246
HindIII	AAGCTT	2 cut(s)	296, 692
HpaII	CCGG	4 cut(s)	156, 468, 1531, 1613
HphI	GGTGA	3 cut(s)	598, 925, 1088
Hpy166II	GTNNAC	6 cut(s)	187, 304, 1414, 1550, 1905, 2023
Hpy8I	GTNNAC	6 cut(s)	187, 304, 1414, 1550, 1905, 2023
Hpy99I	CGWCG	2 cut(s)	200, 1548
HpyAV	CCTTC	8 cut(s)	76, 337, 583, 748, 1096, 1790, 1997, 2088
HpyCH4III	ACNGT	2 cut(s)	1366, 2166
HpyCH4IV	ACGT	3 cut(s)	685, 1448, 2260
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 81, 165, 704, 929, 1154, 1655
HpyF3I	CTNAG	9 cut(s)	171, 375, 663, 711, 1464, 1515, 1674, 1987, 2132
HpySE526I	ACGT	3 cut(s)	685, 1448, 2260
Hsp92I	GRCGYC	1 cut(s)	1543
Hsp92II	CATG	9 cut(s)	164, 211, 491, 974, 1199, 1300, 1321, 1874, 2029
HspAI	GCGC	3 cut(s)	168, 229, 246
Kpn2I	TCCGGA	2 cut(s)	1530, 1612
LguI	GCTCTTC	1 cut(s)	207
LmnI	GCTCC	5 cut(s)	44, 185, 222, 1230, 1615
LweI	GCATC	7 cut(s)	126, 337, 760, 932, 1135, 1469, 2198
MaeI	CTAG	8 cut(s)	287, 545, 602, 1212, 1238, 1937, 2034, 2234
MaeII	ACGT	3 cut(s)	685, 1448, 2260
MaeIII	GTNAC	3 cut(s)	424, 733, 1360
MbiI	CCGCTC	1 cut(s)	39
MflI	RGATCY	6 cut(s)	532, 1054, 1063, 1087, 1609, 1930
MhlI	GDGCHC	1 cut(s)	219
MlyI	GAGTC	3 cut(s)	836, 1051, 1502
MmeI	TCCRAC	3 cut(s)	165, 1785, 1980
MroI	TCCGGA	2 cut(s)	1530, 1612
MseI	TTAA	4 cut(s)	896, 1182, 2055, 2142
MslI	CAYNNNNRTG	5 cut(s)	1017, 1118, 1386, 2194, 2259
MspA1I	CMGCKG	5 cut(s)	72, 130, 884, 1034, 1991
MspI	CCGG	4 cut(s)	156, 468, 1531, 1613
MspR9I	CCNGG	6 cut(s)	156, 468, 1227, 1484, 1646, 1890
MvaI	CCWGG	4 cut(s)	1227, 1484, 1646, 1890
MvnI	CGCG	1 cut(s)	246
MwoI	GCNNNNNNNGC	7 cut(s)	11, 81, 165, 704, 929, 1154, 1655
NciI	CCSGG	2 cut(s)	156, 468
NcoI	CCATGG	3 cut(s)	160, 1317, 1870
NlaIII	CATG	9 cut(s)	164, 211, 491, 974, 1199, 1300, 1321, 1874, 2029
NlaIV	GGNNCC	3 cut(s)	534, 1611, 1617
NsbI	TGCGCA	1 cut(s)	230
NspI	RCATGY	1 cut(s)	974
PaqCI	CACCTGC	1 cut(s)	32
PciI	ACATGT	1 cut(s)	970
PciSI	GCTCTTC	1 cut(s)	207
PcsI	WCGNNNNNNNCGW	1 cut(s)	201
PfeI	GAWTC	7 cut(s)	937, 976, 1192, 1600, 1973, 2128, 2136
PleI	GAGTC	3 cut(s)	835, 1050, 1501
PmaCI	CACGTG	1 cut(s)	2261
PmlI	CACGTG	1 cut(s)	2261
PpsI	GAGTC	3 cut(s)	835, 1050, 1501
Ppu21I	YACGTR	2 cut(s)	686, 2261
PpuMI	RGGWCCY	1 cut(s)	1799
PscI	ACATGT	1 cut(s)	970
Psp124BI	GAGCTC	1 cut(s)	219
Psp5II	RGGWCCY	1 cut(s)	1799
Psp6I	CCWGG	4 cut(s)	1225, 1482, 1644, 1888
PspCI	CACGTG	1 cut(s)	2261
PspGI	CCWGG	4 cut(s)	1225, 1482, 1644, 1888
PspN4I	GGNNCC	3 cut(s)	534, 1611, 1617
PspPI	GGNCC	4 cut(s)	138, 650, 1642, 1799
PspPPI	RGGWCCY	1 cut(s)	1799
PsrI	GAACNNNNNNTAC	2 cut(s)	616, 648
PstI	CTGCAG	1 cut(s)	1039
PstNI	CAGNNNCTG	2 cut(s)	24, 1370
PsuI	RGATCY	6 cut(s)	532, 1054, 1063, 1087, 1609, 1930
PvuII	CAGCTG	3 cut(s)	884, 1034, 1991
RsaI	GTAC	2 cut(s)	625, 969
RsaNI	GTAC	2 cut(s)	624, 968
RseI	CAYNNNNRTG	5 cut(s)	1017, 1118, 1386, 2194, 2259
SacI	GAGCTC	1 cut(s)	219
SapI	GCTCTTC	1 cut(s)	207
SaqAI	TTAA	4 cut(s)	896, 1182, 2055, 2142
Sau96I	GGNCC	4 cut(s)	138, 650, 1642, 1799
SchI	GAGTC	3 cut(s)	836, 1051, 1502
ScrFI	CCNGG	6 cut(s)	156, 468, 1227, 1484, 1646, 1890
SduI	GDGCHC	1 cut(s)	219
SfaNI	GCATC	7 cut(s)	126, 337, 760, 932, 1135, 1469, 2198
SfcI	CTRYAG	2 cut(s)	1035, 2016
SinI	GGWCC	4 cut(s)	138, 650, 1642, 1799
SmiMI	CAYNNNNRTG	5 cut(s)	1017, 1118, 1386, 2194, 2259
SmlI	CTYRAG	2 cut(s)	332, 1150
SmoI	CTYRAG	2 cut(s)	332, 1150
SnaBI	TACGTA	1 cut(s)	686
SspI	AATATT	2 cut(s)	1406, 2087
SspMI	CTAG	8 cut(s)	287, 545, 602, 1212, 1238, 1937, 2034, 2234
SstI	GAGCTC	1 cut(s)	219
StyD4I	CCNGG	6 cut(s)	154, 466, 1225, 1482, 1644, 1888
StyI	CCWWGG	4 cut(s)	160, 255, 1317, 1870
TaaI	ACNGT	2 cut(s)	1366, 2166
TaiI	ACGT	3 cut(s)	688, 1451, 2263
TaqI	TCGA	3 cut(s)	198, 655, 1767
TatI	WGTACW	1 cut(s)	967
TauI	GCSGC	4 cut(s)	102, 168, 1523, 2050
TfiI	GAWTC	7 cut(s)	937, 976, 1192, 1600, 1973, 2128, 2136
Tru1I	TTAA	4 cut(s)	896, 1182, 2055, 2142
Tru9I	TTAA	4 cut(s)	896, 1182, 2055, 2142
TscAI	CASTG	6 cut(s)	280, 318, 546, 1288, 1360, 1416
TspDTI	ATGAA	7 cut(s)	992, 1035, 1184, 1463, 2042, 2128, 2241
TspGWI	ACGGA	3 cut(s)	172, 1022, 1258
TspRI	CASTG	6 cut(s)	280, 318, 546, 1288, 1360, 1416
VpaK11BI	GGWCC	4 cut(s)	138, 650, 1642, 1799
XapI	RAATTY	4 cut(s)	478, 548, 1875, 2229
XceI	RCATGY	1 cut(s)	974
XspI	CTAG	8 cut(s)	287, 545, 602, 1212, 1238, 1937, 2034, 2234

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.