Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0006046

Physical Location & Seq

Genomic Coordinates Reverse (-)

37156205 .. 37163438

Gene Structure 7234 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000024573

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2589 bp

ATGGCGGTGCGAGCCGTCAGCACCTGCTCAATCTTCCGCTCCGCCTCTTCCCCTACTCTCTTCGCCTTCCGCTGCTGCCCGTGCCACTTCCAATTCCGCCGCTTCTCCAAATTAGGCATCCGCTTCCCGCTGTTTTGGTCCGACAAGCTCAGTCCCGGCCATGGCGGCGCTCAGAGCAGCTCCGTCCACAGCCTCGTCGATAGCGTCATGGAAGAGCTCCAATACTTGCGCACAAGAAGAGTTCGCGCCTCCGCCAAGGTGGAACTCACAAGCAGTGGAGAGATACTAGAGGATAAGCTTGTCAACCGAACACTGCAGAAAGGGGTGCTGCTTGAGTTCAAGAAGGATGCTGAACGAGTATTGCTGGCTGTTGCTCAGAAACCCGATGGCAAGAAGAACTGGATGGTGTCTGATCAGAATGGTGTTACATCATCCATCAAACCACAACAAATTACATATATTGTTCCTGGTGTTGAAAATTTTGACCATGCAGAGATTTCAGACTTTATTCAGAAAGCTCAGGAAAACTTGGATCCAGCACTGCTAGAATTCGCTTGGGTTGAACTCCTTGAAAAGAATAAGCGGGTGAAGGTAGAAGAACTAGCAGAGATGATATTTGGTAGTGTGGAGTCCCTAGAATGCTACTGCGCTCATCTTTTGCTTTCAGGAGACGAAATATACTTCACTGTCCTAGAGACGAAAGGTTCTTGCTCTGTATATGGACCTCGACCTGCTGAGCAGGTTGAGGAACTTCTACGTAGGAAGCTTGCAAAGGAGGCTGCTGAGAAAGAGCAGCAGGAGTTTGTAACCCTACTGAAATCTGCGAAGGCTATGCCTTTAGATGCTAAACCTCCTAAATCTTCTTGGATGGTTGAAGAGAGCATCAAACACAGAATTGAGTCTCTTGAATGTTATGCTATTGATGACTGCAAAACTGATGACCAAAGGAAAACAGCTGGAACAATCTTAAAGGCAATGGGGATGGTGAAAACAGCATCATCAGCTCTGAATCTCCTCATAGATATTGGGTATTTCCCTGTACATGTGAATCTGGACTTGTTGAAGTTCAACATTCATACGGATCATTCAGATGAAGTTATATCAGCTGCAGAGAGTCTTCTGTCAGATCCATCAGATCCAGATGAGATTGAAAGGAAAGATCTCACTCACCTGAAGGTCTATGCTATTGATGTGGATGAGGCTGATGAGCTTGATGATGCCTTGAGTGCAACGAGGCTGCAAGATGGACGCATTAAAATATGGATTCATGTTGCAGACCCGACTAGGCTTGTTCAACCTGGGAGCATACTAGACAGGGAGGCTATGAGAAGAGGAACTTCCGTCTTCTTGCCCACTGCTACTTATCCCATGTTCCCAGAAAAACTTGCCATGGAGGGAATGAGTTTGCAGCAAGGAGAGATTTGCAGTGCTGTTACAGTATCTGTTGTGCTGCACTCTGATGGCAGTATTGCAGAATATTCAGTGGACAACTCCATCATCAGACCAACATATATGCTAACGTATGAGAGTGCATCTGAGCTTCTTCATTTGAACCTGGAAGAAGAGTCTGAACTAAAAATGTTGTCTGAGGCCGCAACTCTCCGGAAAAAATGGCGTCGTGAACAGGGTGGCATTGACACAGCCACATTGGAAGCACGCATAAAAGTAGTGAATCCAGAGGATCCGGAGCCTGTAATAAATCTCTATGTTGAGGACCAGGCTGACCCTGCAATGCGACTGGTCTCTGAGATGATGATACTCTGTGGAGAAGTTATAGCTACTTTTGGTTGTAGCAATAACATTCCTTTACCATACAGGGGACAGCCCCAATCCAACATTGACACATCTGTATTTGCCCATCTTCCAGAAGGACCTGTTAGAAGCTCTGCCCTTGTCAAAATAATGCGTGCTGCTGAAATTGATTTCAGGAAACCTATACGCCATGGAATTTTAGGACTTCCTGGTTATGTTCAGTTTACATCTCCTATCCGCAGATATCTGGATCTACTAGCTCACTATCAGATCAAAGCATTTCTTATTGGAGATTCTCCTCCTTTCTCAGCTGGTCAGTTGGAAGGGATAGCGTCTATAGTGAACATGAATACTAGAGTAGCAAAGCGGCTCTTTAACAGCAGTCTGCGGTATTGGATATTAGAATATTTGAGAAGGCAGCCAAAAGGAAAAAGATTTCGTGCATTGATTCTTAGATTCATTAAGGATCGCATTGCAGCCATACTGTTAGTTGAGGTGGGACTTCAAGCATCTGTGTGGGTGTCTCTGGGATCACAAATTGGAGATGAAGTTCTAGTTCGGAGACGTCTTATTGCTGATATGTCAATCTATATGGAATATTTACCACTGCAACATCTGCAAACTCAAGCTCACAGGGTTATAGATCGAATATCGGTGAGGAATTGTTGCAAGCATTGTCACCTGCGGCAGTTGATGTCCAAGCTGCACTCTTCTCCAACAGAAGTGTCAAAGATGACGAGTAGAGATTTGCTTGAAGATGTTGTGGCCTCACTCCACTTGTTTTTTGGTGGGCTAATGGCATTGCAGTTCTTCGGTTATATTTCTCATTGTGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000175 GO:0000178 GO:0000932 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006364 GO:0006396 GO:0006401 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008408 GO:0009056 GO:0009057 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016072 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019439 GO:0022613 GO:0032991 GO:0034470 GO:0034641 GO:0034655 GO:0034660 GO:0035770 GO:0036464 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0140098 GO:1901360 GO:1901361 GO:1901575 GO:1902494 GO:1905354 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RNB

Protein Analysis

863

Amino Acids

96.93

Weight (kDa)

6.2

Isoelectric Point (pI)

48.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CSD_RNase_II	PF23163	105 - 166	7.5e-28	CSD-like barrel domain
WHD_RNase_II	PF25255	168 - 247	2.1e-30	Ribonuclease II, winged helix domain
HTH_RNase_II	PF23161	248 - 351	1.2e-27	Double HTH domain
RNB	PF00773	385 - 679	1.4e-77	RNB domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006046)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02250
fragaria_vesca	FvH4_6g13600 FvH4_6g13600 FvH4_6g13600 FvH4_6g13600 FvH4_6g13600 FvH4_6g13600 FvH4_6g13600
malus_domestica	MD04G1129900.v1.1 MD12G1143000.v1.1
prunus_persica	Prupe.6G256600_v2.0.a1 Prupe.6G256600_v2.0.a1 Prupe.6G256600_v2.0.a1 Prupe.6G256600_v2.0.a1 Prupe.6G256600_v2.0.a1
pyrus_communis	pycom04g11820
rosa_chinensis	RchiOBHm_Chr3g0466451
rosa_laevigata	RLG00000024573
rosa_multiflora	Rmu_sc0036233.1_g000001
rosa_roxburghii	Rroxscaffold_1G00002460 Rroxscaffold_6G00414460
rosa_rugosa	Rorug03G0082000
rosa_samantha	Rh3AG128500 Rh3BG149900 Rh3DG150600
rosa_wichuraiana	Rw3G012140 Rw3G012150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	32, 2442
AatII	GACGTC	1 cut(s)	2320
Acc16I	TGCGCA	1 cut(s)	230
Acc36I	ACCTGC	4 cut(s)	32, 730, 739, 2442
AccBSI	CCGCTC	1 cut(s)	39
AccII	CGCG	1 cut(s)	246
AccIII	TCCGGA	2 cut(s)	1602, 1684
AcoI	YGGCCR	1 cut(s)	157
AcsI	RAATTY	3 cut(s)	478, 548, 1947
AcuI	CTGAAG	1 cut(s)	1193
AcyI	GRCGYC	2 cut(s)	1615, 2317
AfaI	GTAC	1 cut(s)	1041
AfiI	CCNNNNNNNGG	2 cut(s)	161, 1817
AflIII	ACRYGT	1 cut(s)	1042
AjnI	CCWGG	5 cut(s)	466, 1297, 1554, 1716, 1960
AloI	GAACNNNNNNTCC	2 cut(s)	2286, 2318
Alw21I	GWGCWC	1 cut(s)	219
Alw26I	GTCTC	6 cut(s)	663, 689, 906, 1747, 2280, 2308
AlwNI	CAGNNNCTG	2 cut(s)	24, 1442
Aor13HI	TCCGGA	2 cut(s)	1602, 1684
AoxI	GGCC	3 cut(s)	157, 1590, 2517
ApoI	RAATTY	3 cut(s)	478, 548, 1947
AspLEI	GCGC	4 cut(s)	170, 231, 248, 650
AspS9I	GGNCC	4 cut(s)	138, 722, 1714, 1871
AsuC2I	CCSGG	1 cut(s)	156
AsuHPI	GGTGA	5 cut(s)	598, 997, 1160, 2419, 2423
AvaII	GGWCC	4 cut(s)	138, 722, 1714, 1871
BamHI	GGATCC	2 cut(s)	532, 1681
BanII	GRGCYC	1 cut(s)	219
BbsI	GAAGAC	2 cut(s)	1109, 1336
Bbv12I	GWGCWC	1 cut(s)	219
BcgI	CGANNNNNNTGC	2 cut(s)	814, 848
BciT130I	CCWGG	5 cut(s)	468, 1299, 1556, 1718, 1962
BclI	TGATCA	1 cut(s)	412
BcnI	CCSGG	1 cut(s)	156
BcoDI	GTCTC	6 cut(s)	663, 689, 906, 1747, 2280, 2308
BfmI	CTRYAG	3 cut(s)	314, 1107, 2088
BfoI	RGCGCY	1 cut(s)	171
BfuAI	ACCTGC	4 cut(s)	32, 730, 739, 2442
BglI	GCCNNNNNGGC	1 cut(s)	165
BglII	AGATCT	1 cut(s)	1159
BlpI	GCTNAGC	1 cut(s)	735
Bme1390I	CCNGG	6 cut(s)	156, 468, 1299, 1556, 1718, 1962
Bme18I	GGWCC	4 cut(s)	138, 722, 1714, 1871
BmgT120I	GGNCC	4 cut(s)	138, 722, 1714, 1871
BmiI	GGNNCC	3 cut(s)	534, 1683, 1689
BmrFI	CCNGG	6 cut(s)	156, 468, 1299, 1556, 1718, 1962
BmsI	GCATC	8 cut(s)	126, 337, 832, 891, 1004, 1207, 1541, 2270
BpiI	GAAGAC	2 cut(s)	1109, 1336
Bpu10I	CCTNAGC	1 cut(s)	519
Bpu1102I	GCTNAGC	1 cut(s)	735
BpuEI	CTTGAG	3 cut(s)	353, 1243, 2361
BpuMI	CCSGG	1 cut(s)	156
BsaAI	YACGTR	1 cut(s)	758
BsaHI	GRCGYC	2 cut(s)	1615, 2317
BsaI	GGTCTC	1 cut(s)	1747
BsaJI	CCNNGG	5 cut(s)	160, 255, 1298, 1389, 1942
BsaWI	WCCGGW	2 cut(s)	1602, 1684
BsaXI	ACNNNNNCTCC	2 cut(s)	2286, 2316
Bsc4I	CCNNNNNNNGG	2 cut(s)	161, 1817
Bse1I	ACTGG	2 cut(s)	404, 1743
Bse3DI	GCAATG	4 cut(s)	981, 1737, 2223, 2552
BseAI	TCCGGA	2 cut(s)	1602, 1684
BseBI	CCWGG	5 cut(s)	468, 1299, 1556, 1718, 1962
BseDI	CCNNGG	5 cut(s)	160, 255, 1298, 1389, 1942
BseGI	GGATG	7 cut(s)	117, 352, 408, 431, 873, 987, 1201
BseLI	CCNNNNNNNGG	2 cut(s)	161, 1817
BseMI	GCAATG	4 cut(s)	981, 1737, 2223, 2552
BseNI	ACTGG	2 cut(s)	404, 1743
BseRI	GAGGAG	2 cut(s)	1004, 2040
BsgI	GTGCAG	2 cut(s)	1436, 2441
Bsh1236I	CGCG	1 cut(s)	246
BshFI	GGCC	3 cut(s)	159, 1592, 2519
BsiHKAI	GWGCWC	1 cut(s)	219
BsiSI	CCGG	3 cut(s)	156, 1603, 1685
BslFI	GGGAC	4 cut(s)	138, 616, 1833, 2265
BslI	CCNNNNNNNGG	2 cut(s)	161, 1817
BsmAI	GTCTC	6 cut(s)	663, 689, 906, 1747, 2280, 2308
BsmBI	CGTCTC	3 cut(s)	663, 689, 2308
BsmFI	GGGAC	4 cut(s)	138, 616, 1833, 2265
BsmI	GAATGC	1 cut(s)	644
BsnI	GGCC	3 cut(s)	159, 1592, 2519
Bso31I	GGTCTC	1 cut(s)	1747
Bsp1286I	GDGCHC	1 cut(s)	219
Bsp13I	TCCGGA	2 cut(s)	1602, 1684
Bsp1407I	TGTACA	1 cut(s)	1039
Bsp1720I	GCTNAGC	1 cut(s)	735
Bsp19I	CCATGG	3 cut(s)	160, 1389, 1942
BspANI	GGCC	3 cut(s)	159, 1592, 2519
BspEI	TCCGGA	2 cut(s)	1602, 1684
BspFNI	CGCG	1 cut(s)	246
BspLI	GGNNCC	3 cut(s)	534, 1683, 1689
BspMAI	CTGCAG	2 cut(s)	318, 1111
BspMI	ACCTGC	4 cut(s)	32, 730, 739, 2442
BspQI	GCTCTTC	1 cut(s)	207
BspTNI	GGTCTC	1 cut(s)	1747
BsrBI	CCGCTC	1 cut(s)	39
BsrDI	GCAATG	4 cut(s)	981, 1737, 2223, 2552
BsrGI	TGTACA	1 cut(s)	1039
BsrI	ACTGG	2 cut(s)	404, 1743
BssECI	CCNNGG	5 cut(s)	160, 255, 1298, 1389, 1942
BssNI	GRCGYC	2 cut(s)	1615, 2317
BssT1I	CCWWGG	4 cut(s)	160, 255, 1389, 1942
Bst2UI	CCWGG	5 cut(s)	468, 1299, 1556, 1718, 1962
Bst4CI	ACNGT	3 cut(s)	688, 1438, 2238
Bst6I	CTCTTC	8 cut(s)	52, 65, 207, 232, 870, 1324, 1557, 2467
BstACI	GRCGYC	2 cut(s)	1615, 2317
BstAPI	GCANNNNNTGC	1 cut(s)	2368
BstAUI	TGTACA	1 cut(s)	1039
BstBAI	YACGTR	1 cut(s)	758
BstC8I	GCNNGC	6 cut(s)	12, 366, 768, 1657, 1908, 2423
BstDSI	CCRYGG	3 cut(s)	160, 1389, 1942
BstF5I	GGATG	7 cut(s)	117, 352, 408, 431, 873, 987, 1201
BstFNI	CGCG	1 cut(s)	246
BstH2I	RGCGCY	1 cut(s)	171
BstHHI	GCGC	4 cut(s)	170, 231, 248, 650
BstMAI	GTCTC	6 cut(s)	663, 689, 906, 1747, 2280, 2308
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 81, 165, 174, 776, 1001, 1226, 1727, 2368
BstNI	CCWGG	5 cut(s)	468, 1299, 1556, 1718, 1962
BstNSI	RCATGY	1 cut(s)	1046
BstSCI	CCNGG	6 cut(s)	154, 466, 1297, 1554, 1716, 1960
BstSFI	CTRYAG	3 cut(s)	314, 1107, 2088
BstSNI	TACGTA	1 cut(s)	758
BstUI	CGCG	1 cut(s)	246
BstV2I	GAAGAC	2 cut(s)	1109, 1336
BstX2I	RGATCY	6 cut(s)	532, 1126, 1135, 1159, 1681, 2002
BstYI	RGATCY	6 cut(s)	532, 1126, 1135, 1159, 1681, 2002
BsuRI	GGCC	3 cut(s)	159, 1592, 2519
BtgI	CCRYGG	3 cut(s)	160, 1389, 1942
BtsCI	GGATG	7 cut(s)	117, 352, 408, 431, 873, 987, 1201
BtsI	GCAGTG	6 cut(s)	280, 311, 539, 1353, 1432, 2357
BtsIMutI	CAGTG	8 cut(s)	280, 311, 539, 684, 1353, 1432, 1488, 2357
BveI	ACCTGC	4 cut(s)	32, 730, 739, 2442
Cac8I	GCNNGC	6 cut(s)	12, 366, 768, 1657, 1908, 2423
CaiI	CAGNNNCTG	2 cut(s)	24, 1442
CfoI	GCGC	4 cut(s)	170, 231, 248, 650
Cfr13I	GGNCC	4 cut(s)	138, 722, 1714, 1871
CseI	GACGC	4 cut(s)	193, 1257, 1604, 2073
Csp6I	GTAC	1 cut(s)	1040
CviAII	CATG	9 cut(s)	161, 208, 488, 1043, 1268, 1369, 1390, 1943, 2098
CviQI	GTAC	1 cut(s)	1040
EaeI	YGGCCR	1 cut(s)	157
Eam1104I	CTCTTC	8 cut(s)	52, 65, 207, 232, 870, 1324, 1557, 2467
EarI	CTCTTC	8 cut(s)	52, 65, 207, 232, 870, 1324, 1557, 2467
EciI	GGCGGA	3 cut(s)	31, 86, 241
Ecl136II	GAGCTC	1 cut(s)	217
Eco105I	TACGTA	1 cut(s)	758
Eco130I	CCWWGG	4 cut(s)	160, 255, 1389, 1942
Eco24I	GRGCYC	1 cut(s)	219
Eco31I	GGTCTC	1 cut(s)	1747
Eco32I	GATATC	1 cut(s)	1997
Eco47I	GGWCC	4 cut(s)	138, 722, 1714, 1871
Eco53kI	GAGCTC	1 cut(s)	217
Eco57I	CTGAAG	1 cut(s)	1193
EcoICRI	GAGCTC	1 cut(s)	217
EcoO109I	RGGNCCY	1 cut(s)	1871
EcoRI	GAATTC	1 cut(s)	548
EcoRII	CCWGG	5 cut(s)	466, 1297, 1554, 1716, 1960
EcoRV	GATATC	1 cut(s)	1997
EcoT14I	CCWWGG	4 cut(s)	160, 255, 1389, 1942
EcoT38I	GRGCYC	1 cut(s)	219
ErhI	CCWWGG	4 cut(s)	160, 255, 1389, 1942
Esp3I	CGTCTC	3 cut(s)	663, 689, 2308
FaeI	CATG	9 cut(s)	164, 211, 491, 1046, 1271, 1372, 1393, 1946, 2101
FalI	AAGNNNNNCTT	6 cut(s)	1321, 1353, 2019, 2051, 2108, 2140
FaqI	GGGAC	4 cut(s)	138, 616, 1833, 2265
FatI	CATG	9 cut(s)	160, 207, 487, 1042, 1267, 1368, 1389, 1942, 2097
FauI	CCCGC	2 cut(s)	135, 576
FbaI	TGATCA	1 cut(s)	412
FokI	GGATG	7 cut(s)	104, 359, 415, 418, 880, 994, 1208
FriOI	GRGCYC	1 cut(s)	219
FspI	TGCGCA	1 cut(s)	230
GlaI	GCGC	4 cut(s)	169, 230, 247, 649
HaeII	RGCGCY	1 cut(s)	171
HaeIII	GGCC	3 cut(s)	159, 1592, 2519
HapII	CCGG	3 cut(s)	156, 1603, 1685
HgaI	GACGC	4 cut(s)	193, 1257, 1604, 2073
HhaI	GCGC	4 cut(s)	170, 231, 248, 650
Hin1I	GRCGYC	2 cut(s)	1615, 2317
Hin1II	CATG	9 cut(s)	164, 211, 491, 1046, 1271, 1372, 1393, 1946, 2101
Hin6I	GCGC	4 cut(s)	168, 229, 246, 648
HinP1I	GCGC	4 cut(s)	168, 229, 246, 648
HincII	GTYRAC	1 cut(s)	304
HindII	GTYRAC	1 cut(s)	304
HindIII	AAGCTT	2 cut(s)	296, 764
HpaII	CCGG	3 cut(s)	156, 1603, 1685
HphI	GGTGA	5 cut(s)	598, 997, 1160, 2419, 2423
Hpy166II	GTNNAC	6 cut(s)	187, 304, 1486, 1622, 1977, 2095
Hpy8I	GTNNAC	6 cut(s)	187, 304, 1486, 1622, 1977, 2095
Hpy99I	CGWCG	2 cut(s)	200, 1620
HpyAV	CCTTC	8 cut(s)	76, 337, 583, 820, 1168, 1862, 2069, 2160
HpyCH4III	ACNGT	3 cut(s)	688, 1438, 2238
HpyCH4IV	ACGT	3 cut(s)	757, 1520, 2317
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 81, 165, 174, 776, 1001, 1226, 1727, 2368
HpySE526I	ACGT	3 cut(s)	757, 1520, 2317
Hsp92I	GRCGYC	2 cut(s)	1615, 2317
Hsp92II	CATG	9 cut(s)	164, 211, 491, 1046, 1271, 1372, 1393, 1946, 2101
HspAI	GCGC	4 cut(s)	168, 229, 246, 648
Kpn2I	TCCGGA	2 cut(s)	1602, 1684
Ksp22I	TGATCA	1 cut(s)	412
LguI	GCTCTTC	1 cut(s)	207
LmnI	GCTCC	5 cut(s)	44, 185, 222, 1302, 1687
LweI	GCATC	8 cut(s)	126, 337, 832, 891, 1004, 1207, 1541, 2270
MaeII	ACGT	3 cut(s)	757, 1520, 2317
MaeIII	GTNAC	4 cut(s)	424, 805, 1432, 2429
MbiI	CCGCTC	1 cut(s)	39
MflI	RGATCY	6 cut(s)	532, 1126, 1135, 1159, 1681, 2002
MhlI	GDGCHC	1 cut(s)	219
MlyI	GAGTC	4 cut(s)	638, 908, 1123, 1574
MmeI	TCCRAC	4 cut(s)	165, 1857, 2052, 2492
MroI	TCCGGA	2 cut(s)	1602, 1684
MseI	TTAA	4 cut(s)	968, 1254, 2127, 2214
MslI	CAYNNNNRTG	3 cut(s)	1089, 1458, 2266
MspA1I	CMGCKG	5 cut(s)	72, 130, 956, 1106, 2063
MspI	CCGG	3 cut(s)	156, 1603, 1685
MspR9I	CCNGG	6 cut(s)	156, 468, 1299, 1556, 1718, 1962
Mva1269I	GAATGC	1 cut(s)	644
MvaI	CCWGG	5 cut(s)	468, 1299, 1556, 1718, 1962
MvnI	CGCG	1 cut(s)	246
MwoI	GCNNNNNNNGC	9 cut(s)	11, 81, 165, 174, 776, 1001, 1226, 1727, 2368
NciI	CCSGG	1 cut(s)	156
NcoI	CCATGG	3 cut(s)	160, 1389, 1942
NlaIII	CATG	9 cut(s)	164, 211, 491, 1046, 1271, 1372, 1393, 1946, 2101
NlaIV	GGNNCC	3 cut(s)	534, 1683, 1689
NmuCI	GTSAC	1 cut(s)	2429
NsbI	TGCGCA	1 cut(s)	230
NspI	RCATGY	1 cut(s)	1046
PaqCI	CACCTGC	2 cut(s)	32, 2442
PciI	ACATGT	1 cut(s)	1042
PciSI	GCTCTTC	1 cut(s)	207
PcsI	WCGNNNNNNNCGW	1 cut(s)	201
PctI	GAATGC	1 cut(s)	644
PfeI	GAWTC	7 cut(s)	1009, 1048, 1264, 1672, 2045, 2200, 2208
PleI	GAGTC	4 cut(s)	637, 907, 1122, 1573
PpsI	GAGTC	4 cut(s)	637, 907, 1122, 1573
Ppu21I	YACGTR	1 cut(s)	758
PpuMI	RGGWCCY	1 cut(s)	1871
PscI	ACATGT	1 cut(s)	1042
Psp124BI	GAGCTC	1 cut(s)	219
Psp5II	RGGWCCY	1 cut(s)	1871
Psp6I	CCWGG	5 cut(s)	466, 1297, 1554, 1716, 1960
PspGI	CCWGG	5 cut(s)	466, 1297, 1554, 1716, 1960
PspN4I	GGNNCC	3 cut(s)	534, 1683, 1689
PspPI	GGNCC	4 cut(s)	138, 722, 1714, 1871
PspPPI	RGGWCCY	1 cut(s)	1871
PstI	CTGCAG	2 cut(s)	318, 1111
PstNI	CAGNNNCTG	2 cut(s)	24, 1442
PsuI	RGATCY	6 cut(s)	532, 1126, 1135, 1159, 1681, 2002
PvuII	CAGCTG	3 cut(s)	956, 1106, 2063
RsaI	GTAC	1 cut(s)	1041
RsaNI	GTAC	1 cut(s)	1040
RseI	CAYNNNNRTG	3 cut(s)	1089, 1458, 2266
SacI	GAGCTC	1 cut(s)	219
SapI	GCTCTTC	1 cut(s)	207
SaqAI	TTAA	4 cut(s)	968, 1254, 2127, 2214
Sau96I	GGNCC	4 cut(s)	138, 722, 1714, 1871
SchI	GAGTC	4 cut(s)	638, 908, 1123, 1574
ScrFI	CCNGG	6 cut(s)	156, 468, 1299, 1556, 1718, 1962
SduI	GDGCHC	1 cut(s)	219
SfaNI	GCATC	8 cut(s)	126, 337, 832, 891, 1004, 1207, 1541, 2270
SfcI	CTRYAG	3 cut(s)	314, 1107, 2088
SinI	GGWCC	4 cut(s)	138, 722, 1714, 1871
SmiMI	CAYNNNNRTG	3 cut(s)	1089, 1458, 2266
SmlI	CTYRAG	3 cut(s)	332, 1222, 2376
SmoI	CTYRAG	3 cut(s)	332, 1222, 2376
SnaBI	TACGTA	1 cut(s)	758
SspI	AATATT	3 cut(s)	1478, 2159, 2351
SstI	GAGCTC	1 cut(s)	219
StyD4I	CCNGG	6 cut(s)	154, 466, 1297, 1554, 1716, 1960
StyI	CCWWGG	4 cut(s)	160, 255, 1389, 1942
TaaI	ACNGT	3 cut(s)	688, 1438, 2238
TaiI	ACGT	3 cut(s)	760, 1523, 2320
TaqI	TCGA	3 cut(s)	198, 727, 2398
TatI	WGTACW	1 cut(s)	1039
TauI	GCSGC	5 cut(s)	102, 168, 1595, 2122, 2440
TfiI	GAWTC	7 cut(s)	1009, 1048, 1264, 1672, 2045, 2200, 2208
Tru1I	TTAA	4 cut(s)	968, 1254, 2127, 2214
Tru9I	TTAA	4 cut(s)	968, 1254, 2127, 2214
TscAI	CASTG	8 cut(s)	280, 318, 546, 691, 1360, 1432, 1488, 2364
TseFI	GTSAC	1 cut(s)	2429
Tsp45I	GTSAC	1 cut(s)	2429
TspDTI	ATGAA	7 cut(s)	1064, 1107, 1256, 1535, 2114, 2200, 2313
TspGWI	ACGGA	3 cut(s)	172, 1094, 1330
TspRI	CASTG	8 cut(s)	280, 318, 546, 691, 1360, 1432, 1488, 2364
VpaK11BI	GGWCC	4 cut(s)	138, 722, 1714, 1871
XapI	RAATTY	3 cut(s)	478, 548, 1947
XceI	RCATGY	1 cut(s)	1046
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2534
ZraI	GACGTC	1 cut(s)	2318

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.