Ribonuclease II, chloroplastic
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G02250 |
| fragaria_vesca | FvH4_6g13600 FvH4_6g13600 FvH4_6g13600 FvH4_6g13600 FvH4_6g13600 FvH4_6g13600 FvH4_6g13600 |
| malus_domestica | MD04G1129900.v1.1 MD12G1143000.v1.1 |
| prunus_persica | Prupe.6G256600_v2.0.a1 Prupe.6G256600_v2.0.a1 Prupe.6G256600_v2.0.a1 Prupe.6G256600_v2.0.a1 Prupe.6G256600_v2.0.a1 |
| pyrus_communis | pycom04g11820 |
| rosa_chinensis | RchiOBHm_Chr3g0466451 |
| rosa_laevigata | RLG00000024573 |
| rosa_multiflora | Rmu_sc0036233.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00002460 Rroxscaffold_6G00414460 |
| rosa_rugosa | Rorug03G0082000 |
| rosa_samantha | Rh3AG128500 Rh3BG149900 Rh3DG150600 |
| rosa_wichuraiana | Rw3G012140 Rw3G012150 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 732 |
| AccB1I | GGYRCC | 1 cut(s) | 1441 |
| AccI | GTMKAC | 1 cut(s) | 480 |
| AccII | CGCG | 1 cut(s) | 1503 |
| AciI | CCGC | 4 cut(s) | 599, 854, 933, 1397 |
| AclWI | GGATC | 4 cut(s) | 845, 858, 1179, 1395 |
| AcoI | YGGCCR | 1 cut(s) | 1398 |
| AcsI | RAATTY | 1 cut(s) | 1116 |
| AcuI | CTGAAG | 1 cut(s) | 1279 |
| AcyI | GRCGYC | 1 cut(s) | 784 |
| AfaI | GTAC | 3 cut(s) | 247, 927, 1313 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 757, 986 |
| AflIII | ACRYGT | 2 cut(s) | 211, 681 |
| AgsI | TTSAA | 8 cut(s) | 77, 178, 232, 238, 320, 464, 721, 1427 |
| AjnI | CCWGG | 2 cut(s) | 466, 885 |
| AleI | CACNNNNGTG | 1 cut(s) | 1016 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 732, 764 |
| AluBI | AGCT | 9 cut(s) | 80, 125, 173, 379, 709, 1181, 1232, 1454, 1493 |
| AluI | AGCT | 9 cut(s) | 80, 125, 173, 379, 709, 1181, 1232, 1454, 1493 |
| Alw21I | GWGCWC | 2 cut(s) | 381, 1456 |
| Alw26I | GTCTC | 1 cut(s) | 75 |
| AlwI | GGATC | 4 cut(s) | 845, 858, 1179, 1395 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 896 |
| AoxI | GGCC | 1 cut(s) | 1398 |
| ApeKI | GCWGC | 6 cut(s) | 619, 761, 856, 1079, 1299, 1339 |
| ApoI | RAATTY | 1 cut(s) | 1116 |
| AseI | ATTAAT | 1 cut(s) | 867 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1218 |
| AspLEI | GCGC | 1 cut(s) | 1366 |
| AspS9I | GGNCC | 1 cut(s) | 1040 |
| AsuHPI | GGTGA | 1 cut(s) | 1204 |
| AvaII | GGWCC | 1 cut(s) | 1040 |
| BaeGI | GKGCMC | 1 cut(s) | 1446 |
| BamHI | GGATCC | 1 cut(s) | 850 |
| BanI | GGYRCC | 1 cut(s) | 1441 |
| BanII | GRGCYC | 2 cut(s) | 381, 1456 |
| BbsI | GAAGAC | 1 cut(s) | 1298 |
| Bbv12I | GWGCWC | 2 cut(s) | 381, 1456 |
| BbvI | GCAGC | 6 cut(s) | 606, 748, 868, 1066, 1311, 1351 |
| BccI | CCATC | 5 cut(s) | 145, 407, 913, 1163, 1243 |
| BciT130I | CCWGG | 2 cut(s) | 468, 887 |
| BclI | TGATCA | 1 cut(s) | 250 |
| BcoDI | GTCTC | 1 cut(s) | 75 |
| BfaI | CTAG | 3 cut(s) | 453, 960, 1178 |
| BfmI | CTRYAG | 2 cut(s) | 276, 982 |
| BfuAI | ACCTGC | 1 cut(s) | 732 |
| BglII | AGATCT | 1 cut(s) | 328 |
| BisI | GCNGC | 7 cut(s) | 620, 762, 857, 1080, 1300, 1340, 1398 |
| BlsI | GCNGC | 7 cut(s) | 621, 763, 858, 1081, 1301, 1341, 1399 |
| Bme1390I | CCNGG | 2 cut(s) | 468, 887 |
| Bme18I | GGWCC | 1 cut(s) | 1040 |
| BmgT120I | GGNCC | 1 cut(s) | 1040 |
| BmiI | GGNNCC | 2 cut(s) | 852, 1443 |
| BmrFI | CCNGG | 2 cut(s) | 468, 887 |
| BmsI | GCATC | 6 cut(s) | 82, 376, 436, 710, 837, 1262 |
| BpiI | GAAGAC | 1 cut(s) | 1298 |
| BsaHI | GRCGYC | 1 cut(s) | 784 |
| BsaJI | CCNNGG | 2 cut(s) | 467, 1446 |
| BsaWI | WCCGGW | 1 cut(s) | 771 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 757, 986 |
| Bse1I | ACTGG | 1 cut(s) | 1319 |
| Bse3DI | GCAATG | 4 cut(s) | 498, 601, 636, 906 |
| BseBI | CCWGG | 2 cut(s) | 468, 887 |
| BseDI | CCNNGG | 2 cut(s) | 467, 1446 |
| BseGI | GGATG | 5 cut(s) | 156, 240, 1155, 1254, 1495 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 757, 986 |
| BseMI | GCAATG | 4 cut(s) | 498, 601, 636, 906 |
| BseMII | CTCAG | 5 cut(s) | 383, 747, 906, 1242, 1322 |
| BseNI | ACTGG | 1 cut(s) | 1319 |
| BseRI | GAGGAG | 1 cut(s) | 173 |
| BseSI | GKGCMC | 1 cut(s) | 1446 |
| BseXI | GCAGC | 6 cut(s) | 606, 748, 868, 1066, 1311, 1351 |
| BsgI | GTGCAG | 1 cut(s) | 605 |
| Bsh1236I | CGCG | 1 cut(s) | 1503 |
| BshFI | GGCC | 1 cut(s) | 1400 |
| BshNI | GGYRCC | 1 cut(s) | 1441 |
| BsiHKAI | GWGCWC | 2 cut(s) | 381, 1456 |
| BsiSI | CCGG | 1 cut(s) | 772 |
| BslFI | GGGAC | 1 cut(s) | 1434 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 757, 986 |
| BsmAI | GTCTC | 1 cut(s) | 75 |
| BsmFI | GGGAC | 1 cut(s) | 1434 |
| BsnI | GGCC | 1 cut(s) | 1400 |
| Bsp1286I | GDGCHC | 3 cut(s) | 381, 1446, 1456 |
| Bsp143I | GATC | 5 cut(s) | 250, 328, 850, 1171, 1387 |
| BspACI | CCGC | 4 cut(s) | 599, 854, 933, 1397 |
| BspANI | GGCC | 1 cut(s) | 1400 |
| BspCNI | CTCAG | 5 cut(s) | 384, 748, 907, 1241, 1323 |
| BspFNI | CGCG | 1 cut(s) | 1503 |
| BspLI | GGNNCC | 2 cut(s) | 852, 1443 |
| BspMAI | CTGCAG | 1 cut(s) | 280 |
| BspMI | ACCTGC | 1 cut(s) | 732 |
| BspPI | GGATC | 4 cut(s) | 845, 858, 1179, 1395 |
| BspQI | GCTCTTC | 1 cut(s) | 1298 |
| BspT107I | GGYRCC | 1 cut(s) | 1441 |
| BsrDI | GCAATG | 4 cut(s) | 498, 601, 636, 906 |
| BsrI | ACTGG | 1 cut(s) | 1319 |
| BssECI | CCNNGG | 2 cut(s) | 467, 1446 |
| BssMI | GATC | 5 cut(s) | 250, 328, 850, 1171, 1387 |
| BssNI | GRCGYC | 1 cut(s) | 784 |
| Bst2UI | CCWGG | 2 cut(s) | 468, 887 |
| Bst4CI | ACNGT | 2 cut(s) | 346, 607 |
| Bst6I | CTCTTC | 5 cut(s) | 39, 493, 726, 1224, 1298 |
| BstACI | GRCGYC | 1 cut(s) | 784 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 896, 1205 |
| BstC8I | GCNNGC | 2 cut(s) | 97, 826 |
| BstDEI | CTNAG | 8 cut(s) | 137, 392, 705, 756, 915, 1228, 1331, 1373 |
| BstDSI | CCRYGG | 1 cut(s) | 1446 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 755 |
| BstF5I | GGATG | 5 cut(s) | 156, 240, 1155, 1254, 1495 |
| BstFNI | CGCG | 1 cut(s) | 1503 |
| BstHHI | GCGC | 1 cut(s) | 1366 |
| BstKTI | GATC | 5 cut(s) | 253, 331, 853, 1174, 1390 |
| BstMAI | GTCTC | 1 cut(s) | 75 |
| BstMBI | GATC | 5 cut(s) | 250, 328, 850, 1171, 1387 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 92, 170, 395, 896, 1205 |
| BstNI | CCWGG | 2 cut(s) | 468, 887 |
| BstNSI | RCATGY | 2 cut(s) | 215, 685 |
| BstSCI | CCNGG | 2 cut(s) | 466, 885 |
| BstSFI | CTRYAG | 2 cut(s) | 276, 982 |
| BstSLI | GKGCMC | 1 cut(s) | 1446 |
| BstUI | CGCG | 1 cut(s) | 1503 |
| BstV1I | GCAGC | 6 cut(s) | 606, 748, 868, 1066, 1311, 1351 |
| BstV2I | GAAGAC | 1 cut(s) | 1298 |
| BstX2I | RGATCY | 3 cut(s) | 328, 850, 1171 |
| BstYI | RGATCY | 3 cut(s) | 328, 850, 1171 |
| BsuRI | GGCC | 1 cut(s) | 1400 |
| BtgI | CCRYGG | 1 cut(s) | 1446 |
| BtgZI | GCGATG | 1 cut(s) | 1518 |
| BtsCI | GGATG | 5 cut(s) | 156, 240, 1155, 1254, 1495 |
| BtsI | GCAGTG | 1 cut(s) | 522 |
| BtsIMutI | CAGTG | 3 cut(s) | 522, 657, 912 |
| BveI | ACCTGC | 1 cut(s) | 732 |
| Cac8I | GCNNGC | 2 cut(s) | 97, 826 |
| CaiI | CAGNNNCTG | 1 cut(s) | 896 |
| CfoI | GCGC | 1 cut(s) | 1366 |
| Cfr13I | GGNCC | 1 cut(s) | 1040 |
| CseI | GACGC | 1 cut(s) | 773 |
| Csp6I | GTAC | 3 cut(s) | 246, 926, 1312 |
| CviAII | CATG | 5 cut(s) | 212, 437, 682, 1112, 1267 |
| CviQI | GTAC | 3 cut(s) | 246, 926, 1312 |
| DdeI | CTNAG | 8 cut(s) | 137, 392, 705, 756, 915, 1228, 1331, 1373 |
| DpnI | GATC | 5 cut(s) | 252, 330, 852, 1173, 1389 |
| DpnII | GATC | 5 cut(s) | 250, 328, 850, 1171, 1387 |
| EaeI | YGGCCR | 1 cut(s) | 1398 |
| Eam1104I | CTCTTC | 5 cut(s) | 39, 493, 726, 1224, 1298 |
| EarI | CTCTTC | 5 cut(s) | 39, 493, 726, 1224, 1298 |
| Ecl136II | GAGCTC | 2 cut(s) | 379, 1454 |
| Eco24I | GRGCYC | 2 cut(s) | 381, 1456 |
| Eco47I | GGWCC | 1 cut(s) | 1040 |
| Eco53kI | GAGCTC | 2 cut(s) | 379, 1454 |
| Eco57I | CTGAAG | 1 cut(s) | 1279 |
| EcoICRI | GAGCTC | 2 cut(s) | 379, 1454 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 755 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1040 |
| EcoRII | CCWGG | 2 cut(s) | 466, 885 |
| EcoT38I | GRGCYC | 2 cut(s) | 381, 1456 |
| FaeI | CATG | 5 cut(s) | 215, 440, 685, 1115, 1270 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 490, 522, 1188, 1220 |
| FaqI | GGGAC | 1 cut(s) | 1434 |
| FatI | CATG | 5 cut(s) | 211, 436, 681, 1111, 1266 |
| FauNDI | CATATG | 1 cut(s) | 691 |
| FbaI | TGATCA | 1 cut(s) | 250 |
| FblI | GTMKAC | 1 cut(s) | 480 |
| Fnu4HI | GCNGC | 7 cut(s) | 620, 762, 857, 1080, 1300, 1340, 1398 |
| FokI | GGATG | 5 cut(s) | 163, 227, 1142, 1261, 1482 |
| FriOI | GRGCYC | 2 cut(s) | 381, 1456 |
| Fsp4HI | GCNGC | 7 cut(s) | 620, 762, 857, 1080, 1300, 1340, 1398 |
| FspBI | CTAG | 3 cut(s) | 453, 960, 1178 |
| GlaI | GCGC | 1 cut(s) | 1365 |
| GluI | GCNGC | 7 cut(s) | 620, 762, 857, 1080, 1300, 1340, 1398 |
| HaeIII | GGCC | 1 cut(s) | 1400 |
| HapII | CCGG | 1 cut(s) | 772 |
| HgaI | GACGC | 1 cut(s) | 773 |
| HhaI | GCGC | 1 cut(s) | 1366 |
| Hin1I | GRCGYC | 1 cut(s) | 784 |
| Hin1II | CATG | 5 cut(s) | 215, 440, 685, 1115, 1270 |
| Hin6I | GCGC | 1 cut(s) | 1364 |
| HinP1I | GCGC | 1 cut(s) | 1364 |
| HincII | GTYRAC | 1 cut(s) | 687 |
| HindII | GTYRAC | 1 cut(s) | 687 |
| HindIII | AAGCTT | 2 cut(s) | 78, 707 |
| HinfI | GANTC | 9 cut(s) | 68, 178, 217, 296, 305, 433, 1214, 1369, 1377 |
| HpaII | CCGG | 1 cut(s) | 772 |
| HphI | GGTGA | 1 cut(s) | 1204 |
| Hpy166II | GTNNAC | 6 cut(s) | 364, 481, 655, 687, 1146, 1264 |
| Hpy188I | TCNGA | 9 cut(s) | 56, 259, 295, 304, 310, 757, 1097, 1332, 1392 |
| Hpy188III | TCNNGA | 8 cut(s) | 74, 206, 221, 788, 845, 960, 1034, 1130 |
| Hpy8I | GTNNAC | 6 cut(s) | 364, 481, 655, 687, 1146, 1264 |
| Hpy99I | CGWCG | 1 cut(s) | 789 |
| HpyAV | CCTTC | 4 cut(s) | 314, 1031, 1238, 1329 |
| HpyCH4III | ACNGT | 2 cut(s) | 346, 607 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 92, 170, 395, 896, 1205 |
| HpyF3I | CTNAG | 8 cut(s) | 137, 392, 705, 756, 915, 1228, 1331, 1373 |
| Hsp92I | GRCGYC | 1 cut(s) | 784 |
| Hsp92II | CATG | 5 cut(s) | 215, 440, 685, 1115, 1270 |
| HspAI | GCGC | 1 cut(s) | 1364 |
| Ksp22I | TGATCA | 1 cut(s) | 250 |
| Kzo9I | GATC | 5 cut(s) | 250, 328, 850, 1171, 1387 |
| LguI | GCTCTTC | 1 cut(s) | 1298 |
| LmnI | GCTCC | 2 cut(s) | 471, 1451 |
| Lsp1109I | GCAGC | 6 cut(s) | 606, 748, 868, 1066, 1311, 1351 |
| LweI | GCATC | 6 cut(s) | 82, 376, 436, 710, 837, 1262 |
| MaeI | CTAG | 3 cut(s) | 453, 960, 1178 |
| MaeIII | GTNAC | 2 cut(s) | 601, 910 |
| MalI | GATC | 5 cut(s) | 252, 330, 852, 1173, 1389 |
| MboI | GATC | 5 cut(s) | 250, 328, 850, 1171, 1387 |
| MfeI | CAATTG | 2 cut(s) | 102, 801 |
| MflI | RGATCY | 3 cut(s) | 328, 850, 1171 |
| MhlI | GDGCHC | 3 cut(s) | 381, 1446, 1456 |
| MlyI | GAGTC | 1 cut(s) | 77 |
| MmeI | TCCRAC | 1 cut(s) | 1026 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1218 |
| MseI | TTAA | 7 cut(s) | 423, 669, 840, 867, 1065, 1409, 1521 |
| MslI | CAYNNNNRTG | 5 cut(s) | 258, 627, 833, 917, 1016 |
| MspA1I | CMGCKG | 2 cut(s) | 125, 1232 |
| MspI | CCGG | 1 cut(s) | 772 |
| MspR9I | CCNGG | 2 cut(s) | 468, 887 |
| MunI | CAATTG | 2 cut(s) | 102, 801 |
| MvaI | CCWGG | 2 cut(s) | 468, 887 |
| MvnI | CGCG | 1 cut(s) | 1503 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 92, 170, 395, 896, 1205 |
| NdeI | CATATG | 1 cut(s) | 691 |
| NdeII | GATC | 5 cut(s) | 250, 328, 850, 1171, 1387 |
| NlaIII | CATG | 5 cut(s) | 215, 440, 685, 1115, 1270 |
| NlaIV | GGNNCC | 2 cut(s) | 852, 1443 |
| NmuCI | GTSAC | 1 cut(s) | 910 |
| NspI | RCATGY | 2 cut(s) | 215, 685 |
| OliI | CACNNNNGTG | 1 cut(s) | 1016 |
| PciI | ACATGT | 2 cut(s) | 211, 681 |
| PciSI | GCTCTTC | 1 cut(s) | 1298 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1218 |
| PfeI | GAWTC | 8 cut(s) | 178, 217, 296, 305, 433, 1214, 1369, 1377 |
| PkrI | GCNGC | 7 cut(s) | 621, 763, 858, 1081, 1301, 1341, 1399 |
| PleI | GAGTC | 1 cut(s) | 76 |
| PpsI | GAGTC | 1 cut(s) | 76 |
| PpuMI | RGGWCCY | 1 cut(s) | 1040 |
| PscI | ACATGT | 2 cut(s) | 211, 681 |
| PshBI | ATTAAT | 1 cut(s) | 867 |
| Psp124BI | GAGCTC | 2 cut(s) | 381, 1456 |
| Psp5II | RGGWCCY | 1 cut(s) | 1040 |
| Psp6I | CCWGG | 2 cut(s) | 466, 885 |
| PspGI | CCWGG | 2 cut(s) | 466, 885 |
| PspN4I | GGNNCC | 2 cut(s) | 852, 1443 |
| PspPI | GGNCC | 1 cut(s) | 1040 |
| PspPPI | RGGWCCY | 1 cut(s) | 1040 |
| PstI | CTGCAG | 1 cut(s) | 280 |
| PstNI | CAGNNNCTG | 1 cut(s) | 896 |
| PsuI | RGATCY | 3 cut(s) | 328, 850, 1171 |
| PvuII | CAGCTG | 2 cut(s) | 125, 1232 |
| RsaI | GTAC | 3 cut(s) | 247, 927, 1313 |
| RsaNI | GTAC | 3 cut(s) | 246, 926, 1312 |
| RseI | CAYNNNNRTG | 5 cut(s) | 258, 627, 833, 917, 1016 |
| SacI | GAGCTC | 2 cut(s) | 381, 1456 |
| SapI | GCTCTTC | 1 cut(s) | 1298 |
| SaqAI | TTAA | 7 cut(s) | 423, 669, 840, 867, 1065, 1409, 1521 |
| SatI | GCNGC | 7 cut(s) | 620, 762, 857, 1080, 1300, 1340, 1398 |
| Sau3AI | GATC | 5 cut(s) | 250, 328, 850, 1171, 1387 |
| Sau96I | GGNCC | 1 cut(s) | 1040 |
| SchI | GAGTC | 1 cut(s) | 77 |
| ScrFI | CCNGG | 2 cut(s) | 468, 887 |
| SduI | GDGCHC | 3 cut(s) | 381, 1446, 1456 |
| SfaNI | GCATC | 6 cut(s) | 82, 376, 436, 710, 837, 1262 |
| SfcI | CTRYAG | 2 cut(s) | 276, 982 |
| SinI | GGWCC | 1 cut(s) | 1040 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 258, 627, 833, 917, 1016 |
| SsiI | CCGC | 4 cut(s) | 599, 854, 933, 1397 |
| SspI | AATATT | 1 cut(s) | 647 |
| SspMI | CTAG | 3 cut(s) | 453, 960, 1178 |
| SstI | GAGCTC | 2 cut(s) | 381, 1456 |
| StyD4I | CCNGG | 2 cut(s) | 466, 885 |
| TaaI | ACNGT | 2 cut(s) | 346, 607 |
| TaqI | TCGA | 3 cut(s) | 381, 787, 1008 |
| TauI | GCSGC | 1 cut(s) | 1400 |
| TfiI | GAWTC | 8 cut(s) | 178, 217, 296, 305, 433, 1214, 1369, 1377 |
| Tru1I | TTAA | 7 cut(s) | 423, 669, 840, 867, 1065, 1409, 1521 |
| Tru9I | TTAA | 7 cut(s) | 423, 669, 840, 867, 1065, 1409, 1521 |
| TscAI | CASTG | 3 cut(s) | 529, 657, 919 |
| TseFI | GTSAC | 1 cut(s) | 910 |
| TseI | GCWGC | 6 cut(s) | 619, 761, 856, 1079, 1299, 1339 |
| Tsp45I | GTSAC | 1 cut(s) | 910 |
| TspDTI | ATGAA | 6 cut(s) | 276, 425, 704, 1283, 1369, 1482 |
| TspGWI | ACGGA | 3 cut(s) | 233, 1148, 1423 |
| TspRI | CASTG | 3 cut(s) | 529, 657, 919 |
| VpaK11BI | GGWCC | 1 cut(s) | 1040 |
| VspI | ATTAAT | 1 cut(s) | 867 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 755 |
| XapI | RAATTY | 1 cut(s) | 1116 |
| XbaI | TCTAGA | 1 cut(s) | 959 |
| XceI | RCATGY | 2 cut(s) | 215, 685 |
| XmiI | GTMKAC | 1 cut(s) | 480 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1218 |
| XspI | CTAG | 3 cut(s) | 453, 960, 1178 |