Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0004041

Physical Location & Seq

Genomic Coordinates Reverse (-)

9347672 .. 9353878

Gene Structure 6207 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g15060.t5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

ATGAATGATGAGGGAAAACAGCTGGTGGAGCTGAATCGCCGTTCATGGGATGGGAATAAGGGGGTTAAGGAGGAGGAACAGGGGTTGGTTAAGGGAGATGAGTTGAAAAGTAGTGGGAGAGCTGAGGATGTGAAAGTTAGCAATGGAGGGGTTGTTCAACCCCAGTTTGTTATGCAACAGCCTCAGGGGTCAGCTGTTTGCTGGGAGAGGTTTCTGCATCTGCGATCTCTGAAGGTTTTGCTGGTGGAATATGATGATTGTACTCGCCATGTTGTTGCTGCACTTCTTCGCAATTGCAGTTATGAAGTTATTGAAGCAGCAAACGGAATACAAGCCTGGAAGGTTCTTGAAGATTTGACCAATCATGTTGATCTAATCTTAACTGAGGTTGTTATGCCTTGTGTATCAGGCATTGGTCTCTTATCCAAAATTATGAGCCATAAGTCCCGAAAGAATGTTCCTGTGATTATGATGTCATCTCAAGATTCAATGGGTGTGGTCTTTAAGTGTTTGTCAAAGGGTGCTGTTGACTTCTTGGTGAAGCCCATACGGAAGAATGAGCTTAAGAACCTCTGGCAACATGTTTGGAGGAGATGCCATAGTTCTAGTGGTAGTGGAACTGGAAGCGAAAGTGGCACACAGACTCAGAAGTCTGGAAGATCAAATAGTGTTGACAAGTGTGACAACAACAATAGTGGAAGCAATGATGAGGAAGATGATGGGAGTATGGGTCTGAATGCAGGAGATGGAAGTGACAACGGAAGTGGTACCCAGAGTTCTTGGACGAAACAAGCTGTAGAAGTTGACAGTCCACGACAGGTGTTTTCATGGCATCCTGATAGTACTTGTGCCCAAGTAGTTCACTCCAATGCTGAAACATTTGGTAACCAGTTGGTCACTGCTACTGCAGCGAGGGAGTGCCAGCAACAGAAGGAAGAACATGACAACTTTGCAATGGGTGAAGATTTGGAGATTGGCATAAGTAGCAAGAGAGATGTACAGAGTGAGCATGCTACTGAGTTACCAACCAAACTAGCAGGCCCAAGGAAGAAAAATCTGCTCAAGATAGGTGGTGTCACCAATTCCTCTGATCCCCAGTTGGATAGAACAAAATTTGAAGCTTCTGACGGACATAATAAGGTCTCGGACATTAGCAATACACCTAACAACGATACTGATGAACTACCATCCCTGGAGCTCAGTTTGAAAAGACTTAGAGGAGTTAAAGGCACTGAGACAACAGTACAAGATGACCGCAATGTCTTGAGGCGTTTGGACTCTTCAGCGTTTTCAAGGTATAACTCAGCTTCAAATGCTAACAAGGCTCCTTCCGGACATGTTGGAAGCAATTCTCCGCCGGATGATATTGGAGAAAGTACAAACAAGGATCTGTTTAATGATATCCCATCTCACTCAAGTTACAATCCTCCCAATCAATGCTCAAATGGAGGCAGTAATAACATTGATATGGGCTCCACAACTAATAATAATCCTCCTGAGTCTCTTGTTATAAGCAAGTCAGCAGCTGCATCCACAGTTCAACGCTTGCATCCATCATCTGCTTTTCATCCTGTGAAAAAAGACCCTATGAATGCTACACAGCCAGTTTTAATAGATAATGCTAACAATGCAACAGTACCGGCTCAATCAAGATGTGCCCAGACACCACAATTTCAAACTCAAAACCTCCATCAGGATTATGATCACCATCAGGTCCATCACCCAGTTGCCCAAACAATGCAAAAGCAGCAGCTTCATGACCATAGTGATTTGTCTTTAAAGAAATTGGCTGCAGCAGCTCCACATTGCGGATCATCAAATGTTAGGAGTGGGCCTGTTAAAGGTAATCCTGGAAATTACAGTGTCAATAGAAGTGCTTCTGGCAGTAACCATGGGAGCAATGGGCAAAATGGAAGCAATATTGGAGGTACGAACATGGAAAGTGATAATGGAGTTGCTGGAAAAAGTGGGAGTGGTGACGGTAGCGGAAACCAGAGTGGAAATAGAGTAGATGAAAACAAATTTTCTCGGAGAGAAGCTGCCTTGACCAAGTTCCGTCAGAAAAGAAACGAGAGATGCTTCCGGAAAAAGGTTCGATACCAGAGCAGAAAAAAACTAGCAGAACAGCGACCTCGTGTTCGGGGTCAGTTTGTCCGGCAGACTGTGAGCGAGAACACTAGCAGGACAACAGACAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0006355 GO:0007154 GO:0007165 GO:0007623 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010017 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045892 GO:0045934 GO:0048511 GO:0048519 GO:0048523 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0080090 GO:0097159 GO:0104004 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

CCT Response_reg

Protein Analysis

733

Amino Acids

79.71

Weight (kDa)

8.13

Isoelectric Point (pI)

42.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CCT	PF06203	572 - 614	1e-16	CCT motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004041)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02810 AT5G02810
fragaria_vesca	FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060
malus_domestica	MD04G1113200.v1.1 MD12G1128600.v1.1
prunus_persica	Prupe.6G244200_v2.0.a1 Prupe.6G244200_v2.0.a1 Prupe.6G244200_v2.0.a1 Prupe.6G244200_v2.0.a1
pyrus_communis	pycom04g10210 pycom12g12520
rosa_chinensis	RchiOBHm_Chr3g0468241
rosa_laevigata	RLG00000024439
rosa_multiflora	Rmu_sc0004524.1_g000003 Rmu_sc0005436.1_g000001
rosa_roxburghii	Rroxscaffold_6G00412880
rosa_rugosa	Rorug03G0094600 Rorug03G0094600 Rorug03G0094700
rosa_samantha	Rh3AG142100 Rh3BG163600 Rh3DG164300
rosa_wichuraiana	Rw3G013450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1511
AasI	GACNNNNNNGTC	2 cut(s)	649, 1259
Acc65I	GGTACC	1 cut(s)	767
AccB1I	GGYRCC	1 cut(s)	767
AccIII	TCCGGA	2 cut(s)	1331, 2082
AciI	CCGC	4 cut(s)	1255, 1355, 1809, 1986
AclWI	GGATC	3 cut(s)	1085, 1395, 1819
AcsI	RAATTY	2 cut(s)	1112, 2021
AcuI	CTGAAG	2 cut(s)	251, 1266
AfaI	GTAC	8 cut(s)	262, 769, 844, 999, 1245, 1378, 1638, 1930
AfiI	CCNNNNNNNGG	5 cut(s)	46, 1693, 1808, 1841, 2089
AflII	CTTAAG	1 cut(s)	563
AflIII	ACRYGT	2 cut(s)	580, 1336
AjnI	CCWGG	3 cut(s)	335, 1191, 1849
AloI	GAACNNNNNNTCC	2 cut(s)	138, 170
Alw21I	GWGCWC	1 cut(s)	1200
Alw26I	GTCTC	4 cut(s)	422, 1147, 1229, 1506
AlwI	GGATC	3 cut(s)	1085, 1395, 1819
AlwNI	CAGNNNCTG	1 cut(s)	1526
Aor13HI	TCCGGA	2 cut(s)	1331, 2082
AoxI	GGCC	2 cut(s)	1039, 1832
ApoI	RAATTY	2 cut(s)	1112, 2021
ArsI	GACNNNNNNTTYG	2 cut(s)	2121, 2153
Asp700I	GAANNNNTTC	2 cut(s)	1348, 1876
Asp718I	GGTACC	1 cut(s)	767
AspS9I	GGNCC	3 cut(s)	1040, 1714, 1832
AsuHPI	GGTGA	6 cut(s)	550, 971, 1069, 1697, 1712, 1988
AvaII	GGWCC	1 cut(s)	1714
AxyI	CCTNAGG	1 cut(s)	183
BaeGI	GKGCMC	2 cut(s)	853, 1660
BanI	GGYRCC	1 cut(s)	767
BanII	GRGCYC	2 cut(s)	1200, 1475
BauI	CACGAG	1 cut(s)	2133
Bbv12I	GWGCWC	1 cut(s)	1200
BbvCI	CCTCAGC	1 cut(s)	123
BccI	CCATC	9 cut(s)	44, 713, 740, 1195, 1414, 1561, 1698, 1716, 1725
BceAI	ACGGC	1 cut(s)	24
BciT130I	CCWGG	3 cut(s)	337, 1193, 1851
BclI	TGATCA	1 cut(s)	1702
BcoDI	GTCTC	4 cut(s)	422, 1147, 1229, 1506
BfaI	CTAG	4 cut(s)	606, 1034, 2117, 2178
BfmI	CTRYAG	3 cut(s)	795, 906, 1791
BfrI	CTTAAG	1 cut(s)	563
BmcAI	AGTACT	1 cut(s)	844
Bme1390I	CCNGG	3 cut(s)	337, 1193, 1851
Bme18I	GGWCC	1 cut(s)	1714
BmgT120I	GGNCC	3 cut(s)	1040, 1714, 1832
BmiI	GGNNCC	3 cut(s)	769, 1326, 1474
BmrFI	CCNGG	3 cut(s)	337, 1193, 1851
BmrI	ACTGGG	3 cut(s)	157, 1090, 1718
BmsI	GCATC	6 cut(s)	226, 584, 841, 1538, 1558, 2066
BmuI	ACTGGG	3 cut(s)	157, 1090, 1718
BpmI	CTGGAG	1 cut(s)	1214
Bpu10I	CCTNAGC	1 cut(s)	123
BpuEI	CTTGAG	4 cut(s)	465, 1046, 1285, 1399
BsaBI	GATNNNNATC	2 cut(s)	1701, 1707
BsaI	GGTCTC	2 cut(s)	422, 1147
BsaJI	CCNNGG	3 cut(s)	1043, 1191, 1891
BsaWI	WCCGGW	2 cut(s)	1331, 2082
BsaXI	ACNNNNNCTCC	4 cut(s)	138, 168, 715, 745
Bsc4I	CCNNNNNNNGG	5 cut(s)	46, 1693, 1808, 1841, 2089
Bse118I	RCCGGY	1 cut(s)	1639
Bse1I	ACTGG	6 cut(s)	163, 625, 889, 1096, 1604, 1724
Bse21I	CCTNAGG	1 cut(s)	183
Bse3DI	GCAATG	6 cut(s)	148, 709, 960, 1264, 1804, 1906
Bse8I	GATNNNNATC	2 cut(s)	1701, 1707
BseAI	TCCGGA	2 cut(s)	1331, 2082
BseBI	CCWGG	3 cut(s)	337, 1193, 1851
BseDI	CCNNGG	3 cut(s)	1043, 1191, 1891
BseGI	GGATG	8 cut(s)	55, 133, 832, 1187, 1366, 1529, 1549, 1567
BseJI	GATNNNNATC	2 cut(s)	1701, 1707
BseLI	CCNNNNNNNGG	5 cut(s)	46, 1693, 1808, 1841, 2089
BseMI	GCAATG	6 cut(s)	148, 709, 960, 1264, 1804, 1906
BseMII	CTCAG	9 cut(s)	114, 197, 375, 659, 1008, 1213, 1224, 1317, 1488
BseNI	ACTGG	6 cut(s)	163, 625, 889, 1096, 1604, 1724
BseRI	GAGGAG	3 cut(s)	86, 604, 1233
BseSI	GKGCMC	2 cut(s)	853, 1660
BseYI	CCCAGC	1 cut(s)	201
BsgI	GTGCAG	1 cut(s)	264
BshFI	GGCC	2 cut(s)	1041, 1834
BshNI	GGYRCC	1 cut(s)	767
BsiHKAI	GWGCWC	1 cut(s)	1200
BsiSI	CCGG	5 cut(s)	1332, 1358, 1640, 2083, 2155
BslFI	GGGAC	1 cut(s)	430
BslI	CCNNNNNNNGG	5 cut(s)	46, 1693, 1808, 1841, 2089
BsmAI	GTCTC	4 cut(s)	422, 1147, 1229, 1506
BsmFI	GGGAC	1 cut(s)	430
BsmI	GAATGC	2 cut(s)	742, 1597
BsnI	GGCC	2 cut(s)	1041, 1834
Bso31I	GGTCTC	2 cut(s)	422, 1147
Bsp1286I	GDGCHC	4 cut(s)	853, 1200, 1475, 1660
Bsp13I	TCCGGA	2 cut(s)	1331, 2082
Bsp1407I	TGTACA	1 cut(s)	997
Bsp143I	GATC	7 cut(s)	224, 370, 659, 1090, 1387, 1702, 1811
Bsp19I	CCATGG	1 cut(s)	1891
BspACI	CCGC	4 cut(s)	1255, 1355, 1809, 1986
BspANI	GGCC	2 cut(s)	1041, 1834
BspCNI	CTCAG	9 cut(s)	115, 196, 376, 658, 1009, 1212, 1225, 1316, 1489
BspEI	TCCGGA	2 cut(s)	1331, 2082
BspHI	TCATGA	1 cut(s)	1756
BspLI	GGNNCC	3 cut(s)	769, 1326, 1474
BspMAI	CTGCAG	2 cut(s)	910, 1795
BspPI	GGATC	3 cut(s)	1085, 1395, 1819
BspT107I	GGYRCC	1 cut(s)	767
BspTI	CTTAAG	1 cut(s)	563
BspTNI	GGTCTC	2 cut(s)	422, 1147
BsrDI	GCAATG	6 cut(s)	148, 709, 960, 1264, 1804, 1906
BsrFI	RCCGGY	1 cut(s)	1639
BsrGI	TGTACA	1 cut(s)	997
BsrI	ACTGG	6 cut(s)	163, 625, 889, 1096, 1604, 1724
BssAI	RCCGGY	1 cut(s)	1639
BssECI	CCNNGG	3 cut(s)	1043, 1191, 1891
BssMI	GATC	7 cut(s)	224, 370, 659, 1090, 1387, 1702, 1811
BssSI	CACGAG	1 cut(s)	2133
BssT1I	CCWWGG	2 cut(s)	1043, 1891
Bst2BI	CACGAG	1 cut(s)	2133
Bst2UI	CCWGG	3 cut(s)	337, 1193, 1851
Bst4CI	ACNGT	7 cut(s)	809, 1243, 1537, 1636, 1862, 1982, 2164
Bst6I	CTCTTC	1 cut(s)	1285
BstAFI	CTTAAG	1 cut(s)	563
BstAUI	TGTACA	1 cut(s)	997
BstC8I	GCNNGC	4 cut(s)	923, 1011, 1039, 1547
BstDSI	CCRYGG	1 cut(s)	1891
BstEII	GGTNACC	1 cut(s)	884
BstENI	CCTNNNNNAGG	2 cut(s)	1691, 1839
BstF5I	GGATG	8 cut(s)	55, 133, 832, 1187, 1366, 1529, 1549, 1567
BstKTI	GATC	7 cut(s)	227, 373, 662, 1093, 1390, 1705, 1814
BstMAI	GTCTC	4 cut(s)	422, 1147, 1229, 1506
BstMBI	GATC	7 cut(s)	224, 370, 659, 1090, 1387, 1702, 1811
BstMWI	GCNNNNNNNGC	9 cut(s)	28, 633, 908, 984, 1313, 1322, 1628, 1747, 1796
BstNI	CCWGG	3 cut(s)	337, 1193, 1851
BstNSI	RCATGY	3 cut(s)	584, 1013, 1340
BstPI	GGTNACC	1 cut(s)	884
BstSCI	CCNGG	3 cut(s)	335, 1191, 1849
BstSFI	CTRYAG	3 cut(s)	795, 906, 1791
BstSLI	GKGCMC	2 cut(s)	853, 1660
BstX2I	RGATCY	1 cut(s)	1387
BstYI	RGATCY	1 cut(s)	1387
Bsu36I	CCTNAGG	1 cut(s)	183
BsuRI	GGCC	2 cut(s)	1041, 1834
BtgI	CCRYGG	1 cut(s)	1891
BtsCI	GGATG	8 cut(s)	55, 133, 832, 1187, 1366, 1529, 1549, 1567
BtsI	GCAGTG	1 cut(s)	897
BtsIMutI	CAGTG	3 cut(s)	897, 1230, 1867
Cac8I	GCNNGC	4 cut(s)	923, 1011, 1039, 1547
CaiI	CAGNNNCTG	1 cut(s)	1526
CciI	TCATGA	1 cut(s)	1756
Cfr10I	RCCGGY	1 cut(s)	1639
Cfr13I	GGNCC	3 cut(s)	1040, 1714, 1832
Csp6I	GTAC	8 cut(s)	261, 768, 843, 998, 1244, 1377, 1637, 1929
CspCI	CAANNNNNGTGG	8 cut(s)	477, 512, 676, 711, 745, 780, 1051, 1086
CviQI	GTAC	8 cut(s)	261, 768, 843, 998, 1244, 1377, 1637, 1929
DpnI	GATC	7 cut(s)	226, 372, 661, 1092, 1389, 1704, 1813
DpnII	GATC	7 cut(s)	224, 370, 659, 1090, 1387, 1702, 1811
DraI	TTTAAA	1 cut(s)	1779
DrdI	GACNNNNNNGTC	2 cut(s)	649, 1259
DseDI	GACNNNNNNGTC	2 cut(s)	649, 1259
Eam1104I	CTCTTC	1 cut(s)	1285
EarI	CTCTTC	1 cut(s)	1285
EciI	GGCGGA	1 cut(s)	1344
Ecl136II	GAGCTC	1 cut(s)	1198
Eco130I	CCWWGG	2 cut(s)	1043, 1891
Eco24I	GRGCYC	2 cut(s)	1200, 1475
Eco31I	GGTCTC	2 cut(s)	422, 1147
Eco32I	GATATC	1 cut(s)	1402
Eco47I	GGWCC	1 cut(s)	1714
Eco53kI	GAGCTC	1 cut(s)	1198
Eco57I	CTGAAG	2 cut(s)	251, 1266
Eco81I	CCTNAGG	1 cut(s)	183
Eco91I	GGTNACC	1 cut(s)	884
EcoICRI	GAGCTC	1 cut(s)	1198
EcoNI	CCTNNNNNAGG	2 cut(s)	1691, 1839
EcoO65I	GGTNACC	1 cut(s)	884
EcoRII	CCWGG	3 cut(s)	335, 1191, 1849
EcoRV	GATATC	1 cut(s)	1402
EcoT14I	CCWWGG	2 cut(s)	1043, 1891
EcoT38I	GRGCYC	2 cut(s)	1200, 1475
ErhI	CCWWGG	2 cut(s)	1043, 1891
FaqI	GGGAC	1 cut(s)	430
FbaI	TGATCA	1 cut(s)	1702
FokI	GGATG	8 cut(s)	62, 140, 819, 1174, 1373, 1516, 1536, 1554
FriOI	GRGCYC	2 cut(s)	1200, 1475
FspBI	CTAG	4 cut(s)	606, 1034, 2117, 2178
GsaI	CCCAGC	1 cut(s)	205
GsuI	CTGGAG	1 cut(s)	1214
HaeIII	GGCC	2 cut(s)	1041, 1834
HapII	CCGG	5 cut(s)	1332, 1358, 1640, 2083, 2155
HincII	GTYRAC	3 cut(s)	529, 673, 805
HindII	GTYRAC	3 cut(s)	529, 673, 805
HindIII	AAGCTT	1 cut(s)	1119
HinfI	GANTC	5 cut(s)	34, 485, 643, 1277, 1499
HpaII	CCGG	5 cut(s)	1332, 1358, 1640, 2083, 2155
HphI	GGTGA	6 cut(s)	550, 971, 1069, 1697, 1712, 1988
Hpy166II	GTNNAC	5 cut(s)	529, 673, 805, 812, 862
Hpy188I	TCNGA	8 cut(s)	231, 648, 735, 1090, 1126, 1147, 2031, 2061
Hpy8I	GTNNAC	5 cut(s)	529, 673, 805, 812, 862
HpyAV	CCTTC	4 cut(s)	226, 334, 925, 1338
HpyCH4III	ACNGT	7 cut(s)	809, 1243, 1537, 1636, 1862, 1982, 2164
HpyF10VI	GCNNNNNNNGC	9 cut(s)	28, 633, 908, 984, 1313, 1322, 1628, 1747, 1796
Kpn2I	TCCGGA	2 cut(s)	1331, 2082
KpnI	GGTACC	1 cut(s)	771
Ksp22I	TGATCA	1 cut(s)	1702
Kzo9I	GATC	7 cut(s)	224, 370, 659, 1090, 1387, 1702, 1811
LmnI	GCTCC	6 cut(s)	28, 1195, 1330, 1478, 1804, 1896
LweI	GCATC	6 cut(s)	226, 584, 841, 1538, 1558, 2066
MaeI	CTAG	4 cut(s)	606, 1034, 2117, 2178
MaeIII	GTNAC	9 cut(s)	680, 752, 884, 895, 1020, 1075, 1418, 1886, 1976
MalI	GATC	7 cut(s)	226, 372, 661, 1092, 1389, 1704, 1813
MboI	GATC	7 cut(s)	224, 370, 659, 1090, 1387, 1702, 1811
MboII	GAAGA	9 cut(s)	278, 362, 565, 669, 725, 947, 974, 1060, 1272
MfeI	CAATTG	1 cut(s)	292
MflI	RGATCY	1 cut(s)	1387
MhlI	GDGCHC	4 cut(s)	853, 1200, 1475, 1660
MluCI	AATT	9 cut(s)	292, 429, 1081, 1112, 1348, 1670, 1784, 1855, 2021
MlyI	GAGTC	3 cut(s)	637, 1271, 1508
MmeI	TCCRAC	2 cut(s)	1080, 1321
MroI	TCCGGA	2 cut(s)	1331, 2082
MroXI	GAANNNNTTC	2 cut(s)	1348, 1876
MslI	CAYNNNNRTG	2 cut(s)	867, 1466
MspA1I	CMGCKG	4 cut(s)	22, 194, 1526, 2196
MspCI	CTTAAG	1 cut(s)	563
MspI	CCGG	5 cut(s)	1332, 1358, 1640, 2083, 2155
MspR9I	CCNGG	3 cut(s)	337, 1193, 1851
MunI	CAATTG	1 cut(s)	292
Mva1269I	GAATGC	2 cut(s)	742, 1597
MvaI	CCWGG	3 cut(s)	337, 1193, 1851
MwoI	GCNNNNNNNGC	9 cut(s)	28, 633, 908, 984, 1313, 1322, 1628, 1747, 1796
NcoI	CCATGG	1 cut(s)	1891
NdeII	GATC	7 cut(s)	224, 370, 659, 1090, 1387, 1702, 1811
NlaIV	GGNNCC	3 cut(s)	769, 1326, 1474
NmuCI	GTSAC	5 cut(s)	680, 752, 895, 1075, 1976
NspI	RCATGY	3 cut(s)	584, 1013, 1340
PaeI	GCATGC	1 cut(s)	1013
PagI	TCATGA	1 cut(s)	1756
PciI	ACATGT	2 cut(s)	580, 1336
PctI	GAATGC	2 cut(s)	742, 1597
PdmI	GAANNNNTTC	2 cut(s)	1348, 1876
PfeI	GAWTC	2 cut(s)	34, 485
PfoI	TCCNGGA	1 cut(s)	1849
PleI	GAGTC	3 cut(s)	637, 1271, 1507
PpsI	GAGTC	3 cut(s)	637, 1271, 1507
PscI	ACATGT	2 cut(s)	580, 1336
PsiI	TTATAA	1 cut(s)	1511
Psp124BI	GAGCTC	1 cut(s)	1200
Psp6I	CCWGG	3 cut(s)	335, 1191, 1849
PspEI	GGTNACC	1 cut(s)	884
PspFI	CCCAGC	1 cut(s)	201
PspGI	CCWGG	3 cut(s)	335, 1191, 1849
PspN4I	GGNNCC	3 cut(s)	769, 1326, 1474
PspPI	GGNCC	3 cut(s)	1040, 1714, 1832
PsrI	GAACNNNNNNTAC	2 cut(s)	760, 792
PstI	CTGCAG	2 cut(s)	910, 1795
PstNI	CAGNNNCTG	1 cut(s)	1526
PsuI	RGATCY	1 cut(s)	1387
PvuII	CAGCTG	4 cut(s)	22, 194, 1526, 2196
RsaI	GTAC	8 cut(s)	262, 769, 844, 999, 1245, 1378, 1638, 1930
RsaNI	GTAC	8 cut(s)	261, 768, 843, 998, 1244, 1377, 1637, 1929
RseI	CAYNNNNRTG	2 cut(s)	867, 1466
SacI	GAGCTC	1 cut(s)	1200
Sau3AI	GATC	7 cut(s)	224, 370, 659, 1090, 1387, 1702, 1811
Sau96I	GGNCC	3 cut(s)	1040, 1714, 1832
ScaI	AGTACT	1 cut(s)	844
SchI	GAGTC	3 cut(s)	637, 1271, 1508
ScrFI	CCNGG	3 cut(s)	337, 1193, 1851
SduI	GDGCHC	4 cut(s)	853, 1200, 1475, 1660
SfaNI	GCATC	6 cut(s)	226, 584, 841, 1538, 1558, 2066
SfcI	CTRYAG	3 cut(s)	795, 906, 1791
SinI	GGWCC	1 cut(s)	1714
SmiMI	CAYNNNNRTG	2 cut(s)	867, 1466
SmlI	CTYRAG	5 cut(s)	480, 563, 1061, 1264, 1414
SmoI	CTYRAG	5 cut(s)	480, 563, 1061, 1264, 1414
SphI	GCATGC	1 cut(s)	1013
Sse9I	AATT	9 cut(s)	292, 429, 1081, 1112, 1348, 1670, 1784, 1855, 2021
SsiI	CCGC	4 cut(s)	1255, 1355, 1809, 1986
SspI	AATATT	1 cut(s)	1921
SspMI	CTAG	4 cut(s)	606, 1034, 2117, 2178
SstI	GAGCTC	1 cut(s)	1200
StyD4I	CCNGG	3 cut(s)	335, 1191, 1849
StyI	CCWWGG	2 cut(s)	1043, 1891
TaaI	ACNGT	7 cut(s)	809, 1243, 1537, 1636, 1862, 1982, 2164
TaqI	TCGA	1 cut(s)	2095
TasI	AATT	9 cut(s)	292, 429, 1081, 1112, 1348, 1670, 1784, 1855, 2021
TatI	WGTACW	5 cut(s)	260, 842, 997, 1243, 1376
TfiI	GAWTC	2 cut(s)	34, 485
TscAI	CASTG	3 cut(s)	904, 1237, 1867
TseFI	GTSAC	5 cut(s)	680, 752, 895, 1075, 1976
Tsp45I	GTSAC	5 cut(s)	680, 752, 895, 1075, 1976
TspDTI	ATGAA	9 cut(s)	17, 33, 318, 816, 1194, 1556, 1604, 1745, 2028
TspGWI	ACGGA	5 cut(s)	339, 565, 774, 1143, 2045
TspRI	CASTG	3 cut(s)	904, 1237, 1867
Vha464I	CTTAAG	1 cut(s)	563
VpaK11BI	GGWCC	1 cut(s)	1714
XagI	CCTNNNNNAGG	2 cut(s)	1691, 1839
XapI	RAATTY	2 cut(s)	1112, 2021
XceI	RCATGY	3 cut(s)	584, 1013, 1340
XcmI	CCANNNNNNNNNTGG	2 cut(s)	605, 1898
XmnI	GAANNNNTTC	2 cut(s)	1348, 1876
XspI	CTAG	4 cut(s)	606, 1034, 2117, 2178
ZrmI	AGTACT	1 cut(s)	844

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.