Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0004041

Physical Location & Seq

Genomic Coordinates Reverse (-)

14243738 .. 14248075

Gene Structure 4338 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG164300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2223 bp

ATGAATGATGAGGGAAAACAGCTGCTGGAGCTGAATCGCCGTTCATGGGATGGGAATAAGGGGGTTAAGGATGAGGAACAGGGGTTAGTTAAGGGAGATGATTTGAAAAGTAATGGGAGAGCTGAAGATGTGAAAGTTGGCAATGGACCCCAGTTTGTTATACAACAGCCTCAGAGTTCAACTGTTTGCTGGGAGAGGTTTCTACATCTGAGATCTCTGAAGGTTTTGCTGGTGGAATATGATGATTGTACTCGCCATATTGTTGCTGCACTTCTTCGCAATTGCAGTTATGAAGTTATCGAAGCAGCAAACGGAATACAAGCCTGGAAGGTTCTTGAAGATTTAACCAACCATGTTGATCTAATCTTAACCGAGGTAGTTATGCCATGTGTATCAGGCATTAGTCTTTTATCCAAGATTATGAGCCATAAGTCCCGAAAGAATGTTCCTGTGATTATGATGTCATCTCAAGATTCTATGGGTTTGGTCTTTAAATGTTTGTCAAAGGGGGCTGTTGACTTCTTGGTGAAGCCCATTCGGAAGAATGAGCTTAAGAACCTCTGGCAGCATGTTTGGAGGAGATGCCATAGTTCTAGTGGCAGTGGAACCGGAAGCGAAAGTGGCACACAGACTCAGAAGTCAGTAAGATCAAATAGTGTTGACAAGTCTGACAACAACAGTGGAAGCAATGATGAGGAAGATAATGGGAGTATGGGTTTGAATGTTGGAGATGGAAGTGACAATGGAAGTGGTACTCAGAGTTCTTGGACAAAACAAGCTGTAGAAGTTGACAGTCCACGACAGGTGTTATCATGGCATCCTGATAGTACTTGTGCCCAAGTAGTTCACTCCAACGCTGAAACATTTGGTAAGCAATTGGTTACTGGTGCTGCAGCAAGGGACTGCCAGCAACAGAAAGAAGAACATGACAACTTTGCAATGGGTAAAGATTTGGAGATTGGCATGAATAGCAAGAGAGAGATACAGCGTGAGCATCCTATTGAGTTTCCAACCAAACTAGCAGGCCCAAGGCAGAATAATCTGCTCAACATAGGTTCTGGTAAATATGATGAAAGTCCTTCCAGCAAGCAAAAGTATGATGGTGCTTCTATAACAGGTGATGTCACCAATCCCTCTGATCCCCAGTTGGAGAGCACAAAATTTGAAGCTTCTAACAGACATTATAAGGCCTTGGACATTAGCAGTACACCTAATAATGATACTGATGAACTACCATCCCTAGAGCTGAGTTTGAAAAGACTTAGAGGAGTTAAAGGCACTGAGACAACAGTACAAGATGACCGCAATGTCTTGAGGCGTTCGGACTCTTCAGCATTTTCAAGGTATAATGCAGCCTCAAATGCTAACAAGGCTCCTTCTGGGCATGTTGGAAGCAATTCTCCACATGATAATAATGGAGAAAGTACGAACAAGGATCTGTTTAATGATATCCCATCTCACTCAAGTGATAATCCTCCCAATCAATGCTCAAATGGAGGCAGCAATAACATTGACATGGGCTCCACAACTAATAATAATCCTCGTGAGCCTCTTGTTATAAACAAGACAGCAGCTGCATCCACAATTCAACGTTTGCATCCATCATCTGCTTTTCATCCTGTGAAAAAGGACCCTATGAATGCTACTCAGCTAGTTTTAATAGATAATGCTAACAATGGGGCAACAACAGTACTGGCTCAATCAAGATGTGCCCAGACGCCACAGTTTCAAACTCAAAACCTCCATCAGGTCCATCACCCTGTTGCCCACACAATGCAAAAACAGCAGCTTCCTGACCATAGTGATTTATCTTTAAAGAAATTGGCTGCAGCTGCTCCACATTGCGGGTCATCAAATGTTAGGAGTGGGCCTGTTGAAGGTAATCCTGGAAATTACAGTGTCAACAGAAGTGCTTCTGGCAGTAACCATGGGAGCAATGGGCAAAATGGAAGCAATATTGGAGGTACAAACATGGAAAGTGATAATGGAGTTGCTGGAAAAAGTGGAAGTGGTGATGGTAGTGGAAATAGAGTAGATGAAAACAAATTTTCCCAGAGAGAGGCTGCCTTGACCAAGTTCCGTCAGAAAAGAAATGAGAGATGCTTCCGGAAAAAGGTTCGATATCAAAGCAGAAAAAGACTGGCGGAACAGCGGCCTCGTGTTCGTGGACAGTTTGTCCGGCAGACAATGAGCGAGAACACTACGAGGACAACAGATAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0006355 GO:0007154 GO:0007165 GO:0007623 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010017 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045892 GO:0045934 GO:0048511 GO:0048519 GO:0048523 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0080090 GO:0097159 GO:0104004 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

CCT Response_reg

Protein Analysis

740

Amino Acids

80.87

Weight (kDa)

8.45

Isoelectric Point (pI)

42.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	75 - 186	3.6e-20	Response regulator receiver domain
CCT	PF06203	686 - 728	2.8e-16	CCT motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004041)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02810 AT5G02810
fragaria_vesca	FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060
malus_domestica	MD04G1113200.v1.1 MD12G1128600.v1.1
prunus_persica	Prupe.6G244200_v2.0.a1 Prupe.6G244200_v2.0.a1 Prupe.6G244200_v2.0.a1 Prupe.6G244200_v2.0.a1
pyrus_communis	pycom04g10210 pycom12g12520
rosa_chinensis	RchiOBHm_Chr3g0468241
rosa_laevigata	RLG00000024439
rosa_multiflora	Rmu_sc0004524.1_g000003 Rmu_sc0005436.1_g000001
rosa_roxburghii	Rroxscaffold_6G00412880
rosa_rugosa	Rorug03G0094600 Rorug03G0094600 Rorug03G0094700
rosa_samantha	Rh3AG142100 Rh3BG163600 Rh3DG164300
rosa_wichuraiana	Rw3G013450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1185, 1559
AasI	GACNNNNNNGTC	2 cut(s)	637, 1307
AccIII	TCCGGA	1 cut(s)	2106
AciI	CCGC	4 cut(s)	1303, 1845, 2144, 2152
AclI	AACGTT	1 cut(s)	1591
AclWI	GGATC	2 cut(s)	1133, 1443
AcsI	RAATTY	2 cut(s)	1160, 2045
AcuI	CTGAAG	3 cut(s)	144, 239, 1314
AcyI	GRCGYC	1 cut(s)	1718
AfaI	GTAC	8 cut(s)	250, 754, 829, 1207, 1293, 1426, 1692, 1966
AfiI	CCNNNNNNNGG	6 cut(s)	46, 1747, 1844, 1877, 2059, 2113
AflII	CTTAAG	1 cut(s)	551
AhdI	GACNNNNNGTC	1 cut(s)	2174
AjnI	CCWGG	2 cut(s)	323, 1885
AleI	CACNNNNGTG	1 cut(s)	1464
Alw21I	GWGCWC	1 cut(s)	1157
Alw26I	GTCTC	1 cut(s)	1277
AlwI	GGATC	2 cut(s)	1133, 1443
AlwNI	CAGNNNCTG	2 cut(s)	25, 1574
Aor13HI	TCCGGA	1 cut(s)	2106
AoxI	GGCC	4 cut(s)	1024, 1188, 1868, 2153
ApoI	RAATTY	2 cut(s)	1160, 2045
Asp700I	GAANNNNTTC	2 cut(s)	1396, 1912
AspS9I	GGNCC	5 cut(s)	146, 1025, 1630, 1750, 1868
AsuHPI	GGTGA	5 cut(s)	538, 1117, 1130, 1748, 2024
AvaII	GGWCC	3 cut(s)	146, 1630, 1750
BaeGI	GKGCMC	2 cut(s)	838, 1714
BanII	GRGCYC	1 cut(s)	1523
BauI	CACGAG	2 cut(s)	1542, 2157
Bbv12I	GWGCWC	1 cut(s)	1157
BccI	CCATC	9 cut(s)	44, 725, 1094, 1243, 1462, 1609, 1752, 1761, 2009
BceAI	ACGGC	1 cut(s)	24
BciT130I	CCWGG	2 cut(s)	325, 1887
BcoDI	GTCTC	1 cut(s)	1277
BfaI	CTAG	4 cut(s)	594, 1019, 1241, 1652
BfmI	CTRYAG	3 cut(s)	780, 891, 1827
BfrI	CTTAAG	1 cut(s)	551
BglII	AGATCT	1 cut(s)	212
BmcAI	AGTACT	2 cut(s)	829, 1692
Bme1390I	CCNGG	2 cut(s)	325, 1887
Bme18I	GGWCC	3 cut(s)	146, 1630, 1750
BmeRI	GACNNNNNGTC	1 cut(s)	2174
BmgT120I	GGNCC	5 cut(s)	146, 1025, 1630, 1750, 1868
BmiI	GGNNCC	5 cut(s)	148, 607, 1374, 1522, 1632
BmrFI	CCNGG	2 cut(s)	325, 1887
BmrI	ACTGGG	2 cut(s)	145, 1138
BmsI	GCATC	6 cut(s)	572, 826, 1003, 1586, 1606, 2090
BmuI	ACTGGG	2 cut(s)	145, 1138
BpmI	CTGGAG	1 cut(s)	47
BpuEI	CTTGAG	3 cut(s)	453, 1333, 1447
BsaHI	GRCGYC	1 cut(s)	1718
BsaJI	CCNNGG	4 cut(s)	372, 1028, 1191, 1927
BsaWI	WCCGGW	2 cut(s)	608, 2106
BsaXI	ACNNNNNCTCC	4 cut(s)	700, 730, 1505, 1535
Bsc4I	CCNNNNNNNGG	6 cut(s)	46, 1747, 1844, 1877, 2059, 2113
Bse1I	ACTGG	5 cut(s)	151, 889, 1144, 1698, 2145
Bse3DI	GCAATG	6 cut(s)	148, 694, 945, 1312, 1840, 1942
BseAI	TCCGGA	1 cut(s)	2106
BseBI	CCWGG	2 cut(s)	325, 1887
BseDI	CCNNGG	4 cut(s)	372, 1028, 1191, 1927
BseGI	GGATG	8 cut(s)	55, 76, 817, 994, 1235, 1577, 1597, 1615
BseLI	CCNNNNNNNGG	6 cut(s)	46, 1747, 1844, 1877, 2059, 2113
BseMI	GCAATG	6 cut(s)	148, 694, 945, 1312, 1840, 1942
BseMII	CTCAG	7 cut(s)	185, 200, 647, 770, 1238, 1272, 1661
BseNI	ACTGG	5 cut(s)	151, 889, 1144, 1698, 2145
BseRI	GAGGAG	2 cut(s)	592, 1281
BseSI	GKGCMC	2 cut(s)	838, 1714
BseYI	CCCAGC	1 cut(s)	189
BsgI	GTGCAG	1 cut(s)	252
BshFI	GGCC	4 cut(s)	1026, 1190, 1870, 2155
BsiHKAI	GWGCWC	1 cut(s)	1157
BsiSI	CCGG	3 cut(s)	609, 2107, 2179
BslFI	GGGAC	2 cut(s)	418, 914
BslI	CCNNNNNNNGG	6 cut(s)	46, 1747, 1844, 1877, 2059, 2113
BsmAI	GTCTC	1 cut(s)	1277
BsmFI	GGGAC	2 cut(s)	418, 914
BsmI	GAATGC	1 cut(s)	1645
BsnI	GGCC	4 cut(s)	1026, 1190, 1870, 2155
Bsp1286I	GDGCHC	4 cut(s)	838, 1157, 1523, 1714
Bsp13I	TCCGGA	1 cut(s)	2106
Bsp143I	GATC	5 cut(s)	212, 358, 647, 1138, 1435
Bsp19I	CCATGG	1 cut(s)	1927
BspACI	CCGC	4 cut(s)	1303, 1845, 2144, 2152
BspANI	GGCC	4 cut(s)	1026, 1190, 1870, 2155
BspCNI	CTCAG	7 cut(s)	184, 201, 646, 769, 1239, 1273, 1660
BspEI	TCCGGA	1 cut(s)	2106
BspLI	GGNNCC	5 cut(s)	148, 607, 1374, 1522, 1632
BspMAI	CTGCAG	2 cut(s)	895, 1831
BspPI	GGATC	2 cut(s)	1133, 1443
BspTI	CTTAAG	1 cut(s)	551
BsrDI	GCAATG	6 cut(s)	148, 694, 945, 1312, 1840, 1942
BsrI	ACTGG	5 cut(s)	151, 889, 1144, 1698, 2145
BssECI	CCNNGG	4 cut(s)	372, 1028, 1191, 1927
BssMI	GATC	5 cut(s)	212, 358, 647, 1138, 1435
BssNI	GRCGYC	1 cut(s)	1718
BssSI	CACGAG	2 cut(s)	1542, 2157
BssT1I	CCWWGG	3 cut(s)	1028, 1191, 1927
Bst2BI	CACGAG	2 cut(s)	1542, 2157
Bst2UI	CCWGG	2 cut(s)	325, 1887
Bst4CI	ACNGT	8 cut(s)	184, 680, 794, 1291, 1690, 1725, 1898, 2172
Bst6I	CTCTTC	1 cut(s)	1333
BstACI	GRCGYC	1 cut(s)	1718
BstAFI	CTTAAG	1 cut(s)	551
BstC8I	GCNNGC	3 cut(s)	908, 1024, 1088
BstDEI	CTNAG	8 cut(s)	171, 209, 633, 756, 1247, 1262, 1281, 1647
BstDSI	CCRYGG	1 cut(s)	1927
BstENI	CCTNNNNNAGG	2 cut(s)	1745, 1875
BstF5I	GGATG	8 cut(s)	55, 76, 817, 994, 1235, 1577, 1597, 1615
BstKTI	GATC	5 cut(s)	215, 361, 650, 1141, 1438
BstMAI	GTCTC	1 cut(s)	1277
BstMBI	GATC	5 cut(s)	212, 358, 647, 1138, 1435
BstMWI	GCNNNNNNNGC	7 cut(s)	28, 621, 969, 1361, 1370, 1783, 1832
BstNI	CCWGG	2 cut(s)	325, 1887
BstNSI	RCATGY	2 cut(s)	572, 1388
BstSCI	CCNGG	2 cut(s)	323, 1885
BstSFI	CTRYAG	3 cut(s)	780, 891, 1827
BstSLI	GKGCMC	2 cut(s)	838, 1714
BstX2I	RGATCY	2 cut(s)	212, 1435
BstYI	RGATCY	2 cut(s)	212, 1435
BsuRI	GGCC	4 cut(s)	1026, 1190, 1870, 2155
BtgI	CCRYGG	1 cut(s)	1927
BtsCI	GGATG	8 cut(s)	55, 76, 817, 994, 1235, 1577, 1597, 1615
BtsI	GCAGTG	1 cut(s)	607
BtsIMutI	CAGTG	4 cut(s)	607, 685, 1278, 1903
Cac8I	GCNNGC	3 cut(s)	908, 1024, 1088
CaiI	CAGNNNCTG	2 cut(s)	25, 1574
Cfr13I	GGNCC	5 cut(s)	146, 1025, 1630, 1750, 1868
CseI	GACGC	1 cut(s)	1726
Csp6I	GTAC	8 cut(s)	249, 753, 828, 1206, 1292, 1425, 1691, 1965
CspCI	CAANNNNNGTGG	4 cut(s)	661, 696, 730, 765
CviQI	GTAC	8 cut(s)	249, 753, 828, 1206, 1292, 1425, 1691, 1965
DdeI	CTNAG	8 cut(s)	171, 209, 633, 756, 1247, 1262, 1281, 1647
DpnI	GATC	5 cut(s)	214, 360, 649, 1140, 1437
DpnII	GATC	5 cut(s)	212, 358, 647, 1138, 1435
DraI	TTTAAA	2 cut(s)	493, 1815
DrdI	GACNNNNNNGTC	2 cut(s)	637, 1307
DriI	GACNNNNNGTC	1 cut(s)	2174
DseDI	GACNNNNNNGTC	2 cut(s)	637, 1307
Eam1104I	CTCTTC	1 cut(s)	1333
Eam1105I	GACNNNNNGTC	1 cut(s)	2174
EarI	CTCTTC	1 cut(s)	1333
EciI	GGCGGA	1 cut(s)	2159
Eco130I	CCWWGG	3 cut(s)	1028, 1191, 1927
Eco147I	AGGCCT	1 cut(s)	1190
Eco24I	GRGCYC	1 cut(s)	1523
Eco32I	GATATC	2 cut(s)	1450, 2123
Eco47I	GGWCC	3 cut(s)	146, 1630, 1750
Eco57I	CTGAAG	3 cut(s)	144, 239, 1314
EcoNI	CCTNNNNNAGG	2 cut(s)	1745, 1875
EcoO109I	RGGNCCY	1 cut(s)	1630
EcoRII	CCWGG	2 cut(s)	323, 1885
EcoRV	GATATC	2 cut(s)	1450, 2123
EcoT14I	CCWWGG	3 cut(s)	1028, 1191, 1927
EcoT38I	GRGCYC	1 cut(s)	1523
ErhI	CCWWGG	3 cut(s)	1028, 1191, 1927
FaqI	GGGAC	2 cut(s)	418, 914
FauI	CCCGC	1 cut(s)	1838
FokI	GGATG	8 cut(s)	62, 83, 804, 981, 1222, 1564, 1584, 1602
FriOI	GRGCYC	1 cut(s)	1523
FspBI	CTAG	4 cut(s)	594, 1019, 1241, 1652
GsaI	CCCAGC	1 cut(s)	193
GsuI	CTGGAG	1 cut(s)	47
HaeIII	GGCC	4 cut(s)	1026, 1190, 1870, 2155
HapII	CCGG	3 cut(s)	609, 2107, 2179
HgaI	GACGC	1 cut(s)	1726
Hin1I	GRCGYC	1 cut(s)	1718
HincII	GTYRAC	4 cut(s)	517, 661, 790, 1903
HindII	GTYRAC	4 cut(s)	517, 661, 790, 1903
HindIII	AAGCTT	1 cut(s)	1167
HinfI	GANTC	4 cut(s)	34, 473, 631, 1325
HpaII	CCGG	3 cut(s)	609, 2107, 2179
HphI	GGTGA	5 cut(s)	538, 1117, 1130, 1748, 2024
Hpy166II	GTNNAC	8 cut(s)	517, 661, 790, 797, 847, 1208, 1903, 2168
Hpy188III	TCNNGA	9 cut(s)	335, 435, 470, 821, 1312, 1544, 1704, 1793, 2107
Hpy8I	GTNNAC	8 cut(s)	517, 661, 790, 797, 847, 1208, 1903, 2168
HpyAV	CCTTC	5 cut(s)	214, 322, 1089, 1386, 1871
HpyCH4III	ACNGT	8 cut(s)	184, 680, 794, 1291, 1690, 1725, 1898, 2172
HpyCH4IV	ACGT	1 cut(s)	1591
HpyCH4V	TGCA	9 cut(s)	269, 285, 893, 938, 1352, 1577, 1597, 1777, 1829
HpyF10VI	GCNNNNNNNGC	7 cut(s)	28, 621, 969, 1361, 1370, 1783, 1832
HpyF3I	CTNAG	8 cut(s)	171, 209, 633, 756, 1247, 1262, 1281, 1647
HpySE526I	ACGT	1 cut(s)	1591
Hsp92I	GRCGYC	1 cut(s)	1718
Kpn2I	TCCGGA	1 cut(s)	2106
Kzo9I	GATC	5 cut(s)	212, 358, 647, 1138, 1435
LmnI	GCTCC	5 cut(s)	28, 1378, 1526, 1840, 1932
LweI	GCATC	6 cut(s)	572, 826, 1003, 1586, 1606, 2090
MaeI	CTAG	4 cut(s)	594, 1019, 1241, 1652
MaeII	ACGT	1 cut(s)	1591
MaeIII	GTNAC	4 cut(s)	737, 880, 1123, 1922
MalI	GATC	5 cut(s)	214, 360, 649, 1140, 1437
MboI	GATC	5 cut(s)	212, 358, 647, 1138, 1435
MboII	GAAGA	7 cut(s)	137, 266, 350, 553, 710, 932, 1320
MfeI	CAATTG	2 cut(s)	280, 875
MflI	RGATCY	2 cut(s)	212, 1435
MhlI	GDGCHC	4 cut(s)	838, 1157, 1523, 1714
MluCI	AATT	8 cut(s)	280, 875, 1160, 1396, 1584, 1820, 1891, 2045
MlyI	GAGTC	2 cut(s)	625, 1319
MmeI	TCCRAC	5 cut(s)	706, 876, 1034, 1128, 1369
MroI	TCCGGA	1 cut(s)	2106
MroXI	GAANNNNTTC	2 cut(s)	1396, 1912
MslI	CAYNNNNRTG	2 cut(s)	1464, 1514
MspA1I	CMGCKG	4 cut(s)	22, 1574, 1832, 2152
MspCI	CTTAAG	1 cut(s)	551
MspI	CCGG	3 cut(s)	609, 2107, 2179
MspR9I	CCNGG	2 cut(s)	325, 1887
MunI	CAATTG	2 cut(s)	280, 875
Mva1269I	GAATGC	1 cut(s)	1645
MvaI	CCWGG	2 cut(s)	325, 1887
MwoI	GCNNNNNNNGC	7 cut(s)	28, 621, 969, 1361, 1370, 1783, 1832
NcoI	CCATGG	1 cut(s)	1927
NdeII	GATC	5 cut(s)	212, 358, 647, 1138, 1435
NlaIV	GGNNCC	5 cut(s)	148, 607, 1374, 1522, 1632
NmuCI	GTSAC	2 cut(s)	737, 1123
NspI	RCATGY	2 cut(s)	572, 1388
OliI	CACNNNNGTG	1 cut(s)	1464
PceI	AGGCCT	1 cut(s)	1190
PctI	GAATGC	1 cut(s)	1645
PdmI	GAANNNNTTC	2 cut(s)	1396, 1912
PfeI	GAWTC	2 cut(s)	34, 473
PfoI	TCCNGGA	1 cut(s)	1885
PleI	GAGTC	2 cut(s)	625, 1319
PpsI	GAGTC	2 cut(s)	625, 1319
PpuMI	RGGWCCY	1 cut(s)	1630
PsiI	TTATAA	2 cut(s)	1185, 1559
Psp1406I	AACGTT	1 cut(s)	1591
Psp5II	RGGWCCY	1 cut(s)	1630
Psp6I	CCWGG	2 cut(s)	323, 1885
PspFI	CCCAGC	1 cut(s)	189
PspGI	CCWGG	2 cut(s)	323, 1885
PspN4I	GGNNCC	5 cut(s)	148, 607, 1374, 1522, 1632
PspPI	GGNCC	5 cut(s)	146, 1025, 1630, 1750, 1868
PspPPI	RGGWCCY	1 cut(s)	1630
PsrI	GAACNNNNNNTAC	2 cut(s)	745, 777
PstI	CTGCAG	2 cut(s)	895, 1831
PstNI	CAGNNNCTG	2 cut(s)	25, 1574
PsuI	RGATCY	2 cut(s)	212, 1435
PvuII	CAGCTG	3 cut(s)	22, 1574, 1832
RsaI	GTAC	8 cut(s)	250, 754, 829, 1207, 1293, 1426, 1692, 1966
RsaNI	GTAC	8 cut(s)	249, 753, 828, 1206, 1292, 1425, 1691, 1965
RseI	CAYNNNNRTG	2 cut(s)	1464, 1514
Sau3AI	GATC	5 cut(s)	212, 358, 647, 1138, 1435
Sau96I	GGNCC	5 cut(s)	146, 1025, 1630, 1750, 1868
ScaI	AGTACT	2 cut(s)	829, 1692
SchI	GAGTC	2 cut(s)	625, 1319
ScrFI	CCNGG	2 cut(s)	325, 1887
SduI	GDGCHC	4 cut(s)	838, 1157, 1523, 1714
SfaNI	GCATC	6 cut(s)	572, 826, 1003, 1586, 1606, 2090
SfcI	CTRYAG	3 cut(s)	780, 891, 1827
SinI	GGWCC	3 cut(s)	146, 1630, 1750
SmiMI	CAYNNNNRTG	2 cut(s)	1464, 1514
SmlI	CTYRAG	4 cut(s)	468, 551, 1312, 1462
SmoI	CTYRAG	4 cut(s)	468, 551, 1312, 1462
Sse9I	AATT	8 cut(s)	280, 875, 1160, 1396, 1584, 1820, 1891, 2045
SseBI	AGGCCT	1 cut(s)	1190
SsiI	CCGC	4 cut(s)	1303, 1845, 2144, 2152
SspI	AATATT	1 cut(s)	1957
SspMI	CTAG	4 cut(s)	594, 1019, 1241, 1652
StuI	AGGCCT	1 cut(s)	1190
StyD4I	CCNGG	2 cut(s)	323, 1885
StyI	CCWWGG	3 cut(s)	1028, 1191, 1927
TaaI	ACNGT	8 cut(s)	184, 680, 794, 1291, 1690, 1725, 1898, 2172
TaiI	ACGT	1 cut(s)	1594
TaqI	TCGA	2 cut(s)	300, 2119
TasI	AATT	8 cut(s)	280, 875, 1160, 1396, 1584, 1820, 1891, 2045
TatI	WGTACW	5 cut(s)	248, 827, 1205, 1291, 1690
TauI	GCSGC	1 cut(s)	2155
TfiI	GAWTC	2 cut(s)	34, 473
TscAI	CASTG	4 cut(s)	607, 685, 1285, 1903
TseFI	GTSAC	2 cut(s)	737, 1123
Tsp45I	GTSAC	2 cut(s)	737, 1123
TspDTI	ATGAA	9 cut(s)	17, 33, 306, 980, 1086, 1242, 1604, 1652, 2052
TspGWI	ACGGA	2 cut(s)	327, 2069
TspRI	CASTG	4 cut(s)	607, 685, 1285, 1903
Vha464I	CTTAAG	1 cut(s)	551
VpaK11BI	GGWCC	3 cut(s)	146, 1630, 1750
XagI	CCTNNNNNAGG	2 cut(s)	1745, 1875
XapI	RAATTY	2 cut(s)	1160, 2045
XceI	RCATGY	2 cut(s)	572, 1388
XcmI	CCANNNNNNNNNTGG	2 cut(s)	593, 1934
XmnI	GAANNNNTTC	2 cut(s)	1396, 1912
XspI	CTAG	4 cut(s)	594, 1019, 1241, 1652
ZrmI	AGTACT	2 cut(s)	829, 1692

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.