Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0004041

Physical Location & Seq

Genomic Coordinates Forward (+)

35838743 .. 35843325

Gene Structure 4583 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000024439

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2280 bp

ATGAATGATGAGGGAAAACAGCTGCTGGAGCTGAATTGCCGTTCATGGGATGGGAATAAGGGGGTTAAGGATGAGGAACAGGGGTTAGTTAAGGGAGATGATTTGAAAAGCAATGGGAGAGCTGAAGATGTGAAAGTTGGCAATGGAGGGGTTGGTCAACCCCAGTTTGTTATACAACAGCCTCAGGGTTCAACTGTTTGCTGGGAGAGGTTTCTACATCTGAGATCTCTGAAGGTTTTGCTGGTGGAATATGATGATTGTACTCGCCATATTGTTGCTGCACTTCTTCGCAATTGCAGTTATGAAGTTATCGAAGCAGCAAACGGAATACAAGCCTGGAAGGTTCTTGAAGATTTAACCAATCATGTTGATCTAATCTTAACTGAGGTAGTTATGCCATGTGTATCAGGCATTAGTCTTTTATCCAAGATTATGAGCCATAAGTCCCGAAAGAATGTTCCTGTGATTATGATGTCATCTCAAGATTCTATGGGTTTGGTCTTTAAATGTTTGTCAAAGGGTGCTGTTGACTTCTTGGTGAAGCCCATTCGGAAGAATGAGCTTAAGAACCTCTGGCAGCATGTTTGGAGGAGATGCCATAGTTCTAGTGGTAGTGGAACCGGAAGCGAAAGTGGCACACAGACTCAGAAGTCAGTAAGATCAAATAGTGTTGACAAGTCTGACAACAACAGTGGAAGCAATGATGAGGAAGATAATGGAAGTATGGGTTTGAATGTTGGAGATGGAAGTGACAATGGAAGTGGTACTCAGAGTTCTTGGACAAAACAAGCTGTAGAAGTTGACAGTCCACGACAGGTGTTTTCATGGCATCCTGATAGTACTTGTGCCCAAGTAGTTCACTCCAACGCTGAAACATTTGGTAACCAATTGGTTATTGGTGCTGCAGCAAGGGACTGCCAGCAACAGAAGGAAGAACATGACAACTTTGCAATGGGTAAAGATTTGGAGTTTGGCATAAATAGCAAGAGAGAGATACAGCGTGAGCATCCTAGTGAGTTTCCAACCAAACTAGCAGGCCCAAGGCAGAATAATCTGCTCAAGATAGGTTCTGGTAAATATGATGAACAGACAAATAAGGTGAAGCTAAACCTCAAATGTGAGAGTCCTTCCAGCAAGCAAAAGTATGATGGTGCTTCTATAACAGGTGATGTCACCAATCCCTCTGATCCCCAGTTGGAGAGCACAAAATTTGAAGCTTCTAACAGACATTATAAGGCCTTGGACATTAGCAGTACACCTAATAACGATACTGATGAACTACCATCCCTAGAGCTCAGTTTGAAAAGACTTAGAGGAGTTAAAGACACTGAGACAACAGTACAAGATGACCGCAATGTCTTGAGGCGTTCGGACTCTTCAGCCTTTTCAAGGTATAATGCAGCCTCAAATGCTAACAAGGCTCCTTCTGGGCATGTTGGAAGCAATTCTCCACAAGATAATAATGGAGAAAGTACGAACAAGGATCTGTTTAATGATATCCCATCTCACTCAAGTGACAATCCTCCCAATCAATGCTCAAATGGAGGCAGCAATAACATTGACATGGGCTCCACAACTAATAATAATCCTCGTGAGCCTCTTGTTATAAACAAGTCAGCAGCTGCATCCACAATTCAACGTTTGCATCCATCATCTGCTTTTCATCCTGTGAAAAAGGACACTATGAATGCTACTCAGCTAGTTTTAATAGATAATGCTAACAATGGGGCAACAGTACTGGCTCAATCAAGATGTGCCCAGACACCACAATTTCAAACTCAAAACCTCCATCAGGTCCGTCACCCTGTTGCCCGCACAATGCAAAAACAGCAGCTTCCTGACCATAGTGATTTATCTTTAAAGAAATTGGCTGCAGCTGCTCCACATTGCGGATCATCAAATGTTAGGAGTGGGCCTGTTGAAGGTAATCCTGGAAATTACAGTGTCAACAGAAGTGCTTCTGGCAGTAACCATGGGAGCAATGGGCAAAATGGAAGCAATATTGGAGGTACAAACTTGGAAAGTGATAATGGAGTTGCTGGAAAAAGTGGAAGTGGTGATGGTAGTGGAAACCAGAGTGGAAATAGAGTAGATGAAAACAAATTTTCCCAGAGAGAGGCTGCCTTGACCAAGTTCCGTCAGAAAAGAAATGAGAGATGCTTCCGGAAAAAGGTTCGATATCAAAGCAGAAAAAGACTGGCGGAACAGCGACCTCGTGTTCGTGGACAGTTTGTCCGGCAGACAATGAGCGAGAACACTACCAGGACAGCAGATAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0006355 GO:0007154 GO:0007165 GO:0007623 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010017 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045892 GO:0045934 GO:0048511 GO:0048519 GO:0048523 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0080090 GO:0097159 GO:0104004 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

CCT Response_reg

Protein Analysis

760

Amino Acids

82.88

Weight (kDa)

8.59

Isoelectric Point (pI)

40.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	79 - 190	3.7e-20	Response regulator receiver domain
CCT	PF06203	705 - 747	2.9e-16	CCT motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004041)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02810 AT5G02810
fragaria_vesca	FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060
malus_domestica	MD04G1113200.v1.1 MD12G1128600.v1.1
prunus_persica	Prupe.6G244200_v2.0.a1 Prupe.6G244200_v2.0.a1 Prupe.6G244200_v2.0.a1 Prupe.6G244200_v2.0.a1
pyrus_communis	pycom04g10210 pycom12g12520
rosa_chinensis	RchiOBHm_Chr3g0468241
rosa_laevigata	RLG00000024439
rosa_multiflora	Rmu_sc0004524.1_g000003 Rmu_sc0005436.1_g000001
rosa_roxburghii	Rroxscaffold_6G00412880
rosa_rugosa	Rorug03G0094600 Rorug03G0094600 Rorug03G0094700
rosa_samantha	Rh3AG142100 Rh3BG163600 Rh3DG164300
rosa_wichuraiana	Rw3G013450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1233, 1607
AasI	GACNNNNNNGTC	2 cut(s)	649, 1355
AccIII	TCCGGA	1 cut(s)	2163
AciI	CCGC	4 cut(s)	1351, 1813, 1890, 2201
AclI	AACGTT	1 cut(s)	1639
AclWI	GGATC	3 cut(s)	1181, 1491, 1900
AcsI	RAATTY	2 cut(s)	1208, 2102
AcuI	CTGAAG	3 cut(s)	144, 251, 1362
AfaI	GTAC	8 cut(s)	262, 766, 841, 1255, 1341, 1474, 1737, 2011
AfiI	CCNNNNNNNGG	7 cut(s)	46, 1389, 1792, 1889, 1922, 2116, 2170
AflII	CTTAAG	1 cut(s)	563
AhdI	GACNNNNNGTC	1 cut(s)	2231
AjnI	CCWGG	3 cut(s)	335, 1930, 2261
AleI	CACNNNNGTG	1 cut(s)	1512
Alw21I	GWGCWC	2 cut(s)	1205, 1296
Alw26I	GTCTC	1 cut(s)	1325
AlwI	GGATC	3 cut(s)	1181, 1491, 1900
AlwNI	CAGNNNCTG	2 cut(s)	25, 1622
Aor13HI	TCCGGA	1 cut(s)	2163
AoxI	GGCC	3 cut(s)	1036, 1236, 1913
ApoI	RAATTY	2 cut(s)	1208, 2102
ArsI	GACNNNNNNTTYG	2 cut(s)	2202, 2234
Asp700I	GAANNNNTTC	2 cut(s)	1444, 1957
AspS9I	GGNCC	3 cut(s)	1037, 1795, 1913
AsuHPI	GGTGA	6 cut(s)	550, 1111, 1165, 1178, 1793, 2069
AvaII	GGWCC	1 cut(s)	1795
AxyI	CCTNAGG	1 cut(s)	183
BaeGI	GKGCMC	2 cut(s)	850, 1759
BanII	GRGCYC	2 cut(s)	1296, 1571
BauI	CACGAG	2 cut(s)	1590, 2214
Bbv12I	GWGCWC	2 cut(s)	1205, 1296
BccI	CCATC	8 cut(s)	44, 737, 1142, 1291, 1510, 1657, 1797, 2054
BceAI	ACGGC	1 cut(s)	24
BciT130I	CCWGG	3 cut(s)	337, 1932, 2263
BcoDI	GTCTC	1 cut(s)	1325
BfaI	CTAG	5 cut(s)	606, 1011, 1031, 1289, 1700
BfmI	CTRYAG	3 cut(s)	792, 903, 1872
BfrI	CTTAAG	1 cut(s)	563
BglII	AGATCT	1 cut(s)	224
BmcAI	AGTACT	2 cut(s)	841, 1737
Bme1390I	CCNGG	3 cut(s)	337, 1932, 2263
Bme18I	GGWCC	1 cut(s)	1795
BmeRI	GACNNNNNGTC	1 cut(s)	2231
BmgT120I	GGNCC	3 cut(s)	1037, 1795, 1913
BmiI	GGNNCC	3 cut(s)	619, 1422, 1570
BmrFI	CCNGG	3 cut(s)	337, 1932, 2263
BmrI	ACTGGG	2 cut(s)	157, 1186
BmsI	GCATC	6 cut(s)	584, 838, 1015, 1634, 1654, 2147
BmuI	ACTGGG	2 cut(s)	157, 1186
BpmI	CTGGAG	1 cut(s)	47
BpuEI	CTTGAG	4 cut(s)	465, 1043, 1381, 1495
BsaJI	CCNNGG	3 cut(s)	1040, 1239, 1972
BsaWI	WCCGGW	2 cut(s)	620, 2163
BsaXI	ACNNNNNCTCC	2 cut(s)	1553, 1583
Bsc4I	CCNNNNNNNGG	7 cut(s)	46, 1389, 1792, 1889, 1922, 2116, 2170
Bse1I	ACTGG	4 cut(s)	163, 1192, 1743, 2202
Bse21I	CCTNAGG	1 cut(s)	183
Bse3DI	GCAATG	7 cut(s)	118, 148, 706, 957, 1360, 1885, 1987
BseAI	TCCGGA	1 cut(s)	2163
BseBI	CCWGG	3 cut(s)	337, 1932, 2263
BseDI	CCNNGG	3 cut(s)	1040, 1239, 1972
BseGI	GGATG	8 cut(s)	55, 76, 829, 1006, 1283, 1625, 1645, 1663
BseLI	CCNNNNNNNGG	7 cut(s)	46, 1389, 1792, 1889, 1922, 2116, 2170
BseMI	GCAATG	7 cut(s)	118, 148, 706, 957, 1360, 1885, 1987
BseMII	CTCAG	8 cut(s)	197, 212, 375, 659, 782, 1309, 1320, 1709
BseNI	ACTGG	4 cut(s)	163, 1192, 1743, 2202
BseRI	GAGGAG	2 cut(s)	604, 1329
BseSI	GKGCMC	2 cut(s)	850, 1759
BseYI	CCCAGC	1 cut(s)	201
BsgI	GTGCAG	1 cut(s)	264
BshFI	GGCC	3 cut(s)	1038, 1238, 1915
BsiHKAI	GWGCWC	2 cut(s)	1205, 1296
BsiSI	CCGG	3 cut(s)	621, 2164, 2236
BslFI	GGGAC	2 cut(s)	430, 926
BslI	CCNNNNNNNGG	7 cut(s)	46, 1389, 1792, 1889, 1922, 2116, 2170
BsmAI	GTCTC	1 cut(s)	1325
BsmFI	GGGAC	2 cut(s)	430, 926
BsmI	GAATGC	1 cut(s)	1693
BsnI	GGCC	3 cut(s)	1038, 1238, 1915
Bsp1286I	GDGCHC	5 cut(s)	850, 1205, 1296, 1571, 1759
Bsp13I	TCCGGA	1 cut(s)	2163
Bsp143I	GATC	6 cut(s)	224, 370, 659, 1186, 1483, 1892
Bsp19I	CCATGG	1 cut(s)	1972
BspACI	CCGC	4 cut(s)	1351, 1813, 1890, 2201
BspANI	GGCC	3 cut(s)	1038, 1238, 1915
BspCNI	CTCAG	8 cut(s)	196, 213, 376, 658, 781, 1308, 1321, 1708
BspEI	TCCGGA	1 cut(s)	2163
BspLI	GGNNCC	3 cut(s)	619, 1422, 1570
BspMAI	CTGCAG	2 cut(s)	907, 1876
BspPI	GGATC	3 cut(s)	1181, 1491, 1900
BspTI	CTTAAG	1 cut(s)	563
BsrDI	GCAATG	7 cut(s)	118, 148, 706, 957, 1360, 1885, 1987
BsrI	ACTGG	4 cut(s)	163, 1192, 1743, 2202
BssECI	CCNNGG	3 cut(s)	1040, 1239, 1972
BssMI	GATC	6 cut(s)	224, 370, 659, 1186, 1483, 1892
BssSI	CACGAG	2 cut(s)	1590, 2214
BssT1I	CCWWGG	3 cut(s)	1040, 1239, 1972
Bst2BI	CACGAG	2 cut(s)	1590, 2214
Bst2UI	CCWGG	3 cut(s)	337, 1932, 2263
Bst4CI	ACNGT	7 cut(s)	196, 692, 806, 1339, 1735, 1943, 2229
Bst6I	CTCTTC	1 cut(s)	1381
BstAFI	CTTAAG	1 cut(s)	563
BstC8I	GCNNGC	4 cut(s)	920, 1036, 1136, 1813
BstDEI	CTNAG	9 cut(s)	183, 221, 384, 645, 768, 1295, 1310, 1329, 1695
BstDSI	CCRYGG	1 cut(s)	1972
BstEII	GGTNACC	1 cut(s)	881
BstENI	CCTNNNNNAGG	3 cut(s)	1387, 1790, 1920
BstF5I	GGATG	8 cut(s)	55, 76, 829, 1006, 1283, 1625, 1645, 1663
BstKTI	GATC	6 cut(s)	227, 373, 662, 1189, 1486, 1895
BstMAI	GTCTC	1 cut(s)	1325
BstMBI	GATC	6 cut(s)	224, 370, 659, 1186, 1483, 1892
BstMWI	GCNNNNNNNGC	7 cut(s)	28, 633, 981, 1409, 1418, 1828, 1877
BstNI	CCWGG	3 cut(s)	337, 1932, 2263
BstNSI	RCATGY	2 cut(s)	584, 1436
BstPI	GGTNACC	1 cut(s)	881
BstSCI	CCNGG	3 cut(s)	335, 1930, 2261
BstSFI	CTRYAG	3 cut(s)	792, 903, 1872
BstSLI	GKGCMC	2 cut(s)	850, 1759
BstX2I	RGATCY	2 cut(s)	224, 1483
BstYI	RGATCY	2 cut(s)	224, 1483
Bsu36I	CCTNAGG	1 cut(s)	183
BsuRI	GGCC	3 cut(s)	1038, 1238, 1915
BtgI	CCRYGG	1 cut(s)	1972
BtsCI	GGATG	8 cut(s)	55, 76, 829, 1006, 1283, 1625, 1645, 1663
BtsIMutI	CAGTG	3 cut(s)	697, 1326, 1948
Cac8I	GCNNGC	4 cut(s)	920, 1036, 1136, 1813
CaiI	CAGNNNCTG	2 cut(s)	25, 1622
Cfr13I	GGNCC	3 cut(s)	1037, 1795, 1913
Csp6I	GTAC	8 cut(s)	261, 765, 840, 1254, 1340, 1473, 1736, 2010
CspCI	CAANNNNNGTGG	4 cut(s)	673, 708, 742, 777
CviAII	CATG	9 cut(s)	45, 365, 399, 581, 825, 938, 1433, 1564, 1973
CviQI	GTAC	8 cut(s)	261, 765, 840, 1254, 1340, 1473, 1736, 2010
DdeI	CTNAG	9 cut(s)	183, 221, 384, 645, 768, 1295, 1310, 1329, 1695
DpnI	GATC	6 cut(s)	226, 372, 661, 1188, 1485, 1894
DpnII	GATC	6 cut(s)	224, 370, 659, 1186, 1483, 1892
DraI	TTTAAA	2 cut(s)	505, 1860
DrdI	GACNNNNNNGTC	2 cut(s)	649, 1355
DriI	GACNNNNNGTC	1 cut(s)	2231
DseDI	GACNNNNNNGTC	2 cut(s)	649, 1355
Eam1104I	CTCTTC	1 cut(s)	1381
Eam1105I	GACNNNNNGTC	1 cut(s)	2231
EarI	CTCTTC	1 cut(s)	1381
EciI	GGCGGA	1 cut(s)	2216
Ecl136II	GAGCTC	1 cut(s)	1294
Eco130I	CCWWGG	3 cut(s)	1040, 1239, 1972
Eco147I	AGGCCT	1 cut(s)	1238
Eco24I	GRGCYC	2 cut(s)	1296, 1571
Eco32I	GATATC	2 cut(s)	1498, 2180
Eco47I	GGWCC	1 cut(s)	1795
Eco53kI	GAGCTC	1 cut(s)	1294
Eco57I	CTGAAG	3 cut(s)	144, 251, 1362
Eco81I	CCTNAGG	1 cut(s)	183
Eco91I	GGTNACC	1 cut(s)	881
EcoICRI	GAGCTC	1 cut(s)	1294
EcoNI	CCTNNNNNAGG	3 cut(s)	1387, 1790, 1920
EcoO65I	GGTNACC	1 cut(s)	881
EcoRII	CCWGG	3 cut(s)	335, 1930, 2261
EcoRV	GATATC	2 cut(s)	1498, 2180
EcoT14I	CCWWGG	3 cut(s)	1040, 1239, 1972
EcoT38I	GRGCYC	2 cut(s)	1296, 1571
ErhI	CCWWGG	3 cut(s)	1040, 1239, 1972
FaeI	CATG	9 cut(s)	48, 368, 402, 584, 828, 941, 1436, 1567, 1976
FaqI	GGGAC	2 cut(s)	430, 926
FatI	CATG	9 cut(s)	44, 364, 398, 580, 824, 937, 1432, 1563, 1972
FauI	CCCGC	1 cut(s)	1820
FokI	GGATG	8 cut(s)	62, 83, 816, 993, 1270, 1612, 1632, 1650
FriOI	GRGCYC	2 cut(s)	1296, 1571
FspBI	CTAG	5 cut(s)	606, 1011, 1031, 1289, 1700
GsaI	CCCAGC	1 cut(s)	205
GsuI	CTGGAG	1 cut(s)	47
HaeIII	GGCC	3 cut(s)	1038, 1238, 1915
HapII	CCGG	3 cut(s)	621, 2164, 2236
Hin1II	CATG	9 cut(s)	48, 368, 402, 584, 828, 941, 1436, 1567, 1976
HincII	GTYRAC	5 cut(s)	158, 529, 673, 802, 1948
HindII	GTYRAC	5 cut(s)	158, 529, 673, 802, 1948
HindIII	AAGCTT	1 cut(s)	1215
HinfI	GANTC	4 cut(s)	485, 643, 1123, 1373
HpaII	CCGG	3 cut(s)	621, 2164, 2236
HphI	GGTGA	6 cut(s)	550, 1111, 1165, 1178, 1793, 2069
Hpy166II	GTNNAC	9 cut(s)	158, 529, 673, 802, 809, 859, 1256, 1948, 2225
Hpy188I	TCNGA	9 cut(s)	222, 231, 552, 648, 682, 771, 1186, 1372, 2142
Hpy8I	GTNNAC	9 cut(s)	158, 529, 673, 802, 809, 859, 1256, 1948, 2225
HpyAV	CCTTC	6 cut(s)	226, 334, 922, 1137, 1434, 1916
HpyCH4III	ACNGT	7 cut(s)	196, 692, 806, 1339, 1735, 1943, 2229
HpyCH4IV	ACGT	1 cut(s)	1639
HpyCH4V	TGCA	9 cut(s)	281, 297, 905, 950, 1400, 1625, 1645, 1822, 1874
HpyF10VI	GCNNNNNNNGC	7 cut(s)	28, 633, 981, 1409, 1418, 1828, 1877
HpyF3I	CTNAG	9 cut(s)	183, 221, 384, 645, 768, 1295, 1310, 1329, 1695
HpySE526I	ACGT	1 cut(s)	1639
Hsp92II	CATG	9 cut(s)	48, 368, 402, 584, 828, 941, 1436, 1567, 1976
Kpn2I	TCCGGA	1 cut(s)	2163
Kzo9I	GATC	6 cut(s)	224, 370, 659, 1186, 1483, 1892
LmnI	GCTCC	5 cut(s)	28, 1426, 1574, 1885, 1977
LweI	GCATC	6 cut(s)	584, 838, 1015, 1634, 1654, 2147
MaeI	CTAG	5 cut(s)	606, 1011, 1031, 1289, 1700
MaeII	ACGT	1 cut(s)	1639
MaeIII	GTNAC	6 cut(s)	749, 881, 1171, 1514, 1799, 1967
MalI	GATC	6 cut(s)	226, 372, 661, 1188, 1485, 1894
MboI	GATC	6 cut(s)	224, 370, 659, 1186, 1483, 1892
MboII	GAAGA	7 cut(s)	137, 278, 362, 565, 722, 944, 1368
MfeI	CAATTG	2 cut(s)	292, 887
MflI	RGATCY	2 cut(s)	224, 1483
MhlI	GDGCHC	5 cut(s)	850, 1205, 1296, 1571, 1759
MlyI	GAGTC	3 cut(s)	637, 1132, 1367
MmeI	TCCRAC	5 cut(s)	718, 888, 1046, 1176, 1417
MroI	TCCGGA	1 cut(s)	2163
MroXI	GAANNNNTTC	2 cut(s)	1444, 1957
MslI	CAYNNNNRTG	3 cut(s)	1011, 1512, 1562
MspA1I	CMGCKG	3 cut(s)	22, 1622, 1877
MspCI	CTTAAG	1 cut(s)	563
MspI	CCGG	3 cut(s)	621, 2164, 2236
MspR9I	CCNGG	3 cut(s)	337, 1932, 2263
MunI	CAATTG	2 cut(s)	292, 887
Mva1269I	GAATGC	1 cut(s)	1693
MvaI	CCWGG	3 cut(s)	337, 1932, 2263
MwoI	GCNNNNNNNGC	7 cut(s)	28, 633, 981, 1409, 1418, 1828, 1877
NcoI	CCATGG	1 cut(s)	1972
NdeII	GATC	6 cut(s)	224, 370, 659, 1186, 1483, 1892
NlaIII	CATG	9 cut(s)	48, 368, 402, 584, 828, 941, 1436, 1567, 1976
NlaIV	GGNNCC	3 cut(s)	619, 1422, 1570
NmuCI	GTSAC	4 cut(s)	749, 1171, 1514, 1799
NspI	RCATGY	2 cut(s)	584, 1436
OliI	CACNNNNGTG	1 cut(s)	1512
PceI	AGGCCT	1 cut(s)	1238
PctI	GAATGC	1 cut(s)	1693
PdmI	GAANNNNTTC	2 cut(s)	1444, 1957
PfeI	GAWTC	1 cut(s)	485
PfoI	TCCNGGA	1 cut(s)	1930
PleI	GAGTC	3 cut(s)	637, 1131, 1367
PpsI	GAGTC	3 cut(s)	637, 1131, 1367
PsiI	TTATAA	2 cut(s)	1233, 1607
Psp124BI	GAGCTC	1 cut(s)	1296
Psp1406I	AACGTT	1 cut(s)	1639
Psp6I	CCWGG	3 cut(s)	335, 1930, 2261
PspEI	GGTNACC	1 cut(s)	881
PspFI	CCCAGC	1 cut(s)	201
PspGI	CCWGG	3 cut(s)	335, 1930, 2261
PspN4I	GGNNCC	3 cut(s)	619, 1422, 1570
PspPI	GGNCC	3 cut(s)	1037, 1795, 1913
PsrI	GAACNNNNNNTAC	2 cut(s)	757, 789
PstI	CTGCAG	2 cut(s)	907, 1876
PstNI	CAGNNNCTG	2 cut(s)	25, 1622
PsuI	RGATCY	2 cut(s)	224, 1483
PvuII	CAGCTG	3 cut(s)	22, 1622, 1877
RsaI	GTAC	8 cut(s)	262, 766, 841, 1255, 1341, 1474, 1737, 2011
RsaNI	GTAC	8 cut(s)	261, 765, 840, 1254, 1340, 1473, 1736, 2010
RseI	CAYNNNNRTG	3 cut(s)	1011, 1512, 1562
SacI	GAGCTC	1 cut(s)	1296
Sau3AI	GATC	6 cut(s)	224, 370, 659, 1186, 1483, 1892
Sau96I	GGNCC	3 cut(s)	1037, 1795, 1913
ScaI	AGTACT	2 cut(s)	841, 1737
SchI	GAGTC	3 cut(s)	637, 1132, 1367
ScrFI	CCNGG	3 cut(s)	337, 1932, 2263
SduI	GDGCHC	5 cut(s)	850, 1205, 1296, 1571, 1759
SfaNI	GCATC	6 cut(s)	584, 838, 1015, 1634, 1654, 2147
SfcI	CTRYAG	3 cut(s)	792, 903, 1872
SinI	GGWCC	1 cut(s)	1795
SmiMI	CAYNNNNRTG	3 cut(s)	1011, 1512, 1562
SmlI	CTYRAG	5 cut(s)	480, 563, 1058, 1360, 1510
SmoI	CTYRAG	5 cut(s)	480, 563, 1058, 1360, 1510
SseBI	AGGCCT	1 cut(s)	1238
SsiI	CCGC	4 cut(s)	1351, 1813, 1890, 2201
SspI	AATATT	1 cut(s)	2002
SspMI	CTAG	5 cut(s)	606, 1011, 1031, 1289, 1700
SstI	GAGCTC	1 cut(s)	1296
StuI	AGGCCT	1 cut(s)	1238
StyD4I	CCNGG	3 cut(s)	335, 1930, 2261
StyI	CCWWGG	3 cut(s)	1040, 1239, 1972
TaaI	ACNGT	7 cut(s)	196, 692, 806, 1339, 1735, 1943, 2229
TaiI	ACGT	1 cut(s)	1642
TaqI	TCGA	2 cut(s)	312, 2176
TatI	WGTACW	5 cut(s)	260, 839, 1253, 1339, 1735
TfiI	GAWTC	1 cut(s)	485
TscAI	CASTG	3 cut(s)	697, 1333, 1948
TseFI	GTSAC	4 cut(s)	749, 1171, 1514, 1799
Tsp45I	GTSAC	4 cut(s)	749, 1171, 1514, 1799
TspDTI	ATGAA	9 cut(s)	17, 33, 318, 813, 1098, 1290, 1652, 1700, 2109
TspGWI	ACGGA	3 cut(s)	339, 1787, 2126
TspRI	CASTG	3 cut(s)	697, 1333, 1948
Vha464I	CTTAAG	1 cut(s)	563
VpaK11BI	GGWCC	1 cut(s)	1795
XagI	CCTNNNNNAGG	3 cut(s)	1387, 1790, 1920
XapI	RAATTY	2 cut(s)	1208, 2102
XceI	RCATGY	2 cut(s)	584, 1436
XcmI	CCANNNNNNNNNTGG	3 cut(s)	605, 893, 1979
XmnI	GAANNNNTTC	2 cut(s)	1444, 1957
XspI	CTAG	5 cut(s)	606, 1011, 1031, 1289, 1700
ZrmI	AGTACT	2 cut(s)	841, 1737

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.