Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0004041

Physical Location & Seq

Genomic Coordinates Forward (+)

12995406 .. 12999452

Gene Structure 4047 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g10210.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2319 bp

ATGAATGTTAATAGTGACGAGGACAGACAACTGTTGGAACTAAACCACCGCTCATGGGAGGGCGAGGGGGAGAGGGGTAACAATGGAGTGGAGGATGAGGAAAGGAGGTTAGTCGAGGAAGATGAGTCGAAAAGTAATGGAAGAGCTGGAGATGTAAAAGGTCGGCTAGGAGGGGCTGTTCAAGCCCAGACTGTTACTCAACAGCCTCAAGGGTCGACGGTTTGCTGGGAGAGGTTTCTACATGTAAGATCTCTTAAAGTTTTGCTGGTGGAATATGATGATTCTACTCGCCATGTTGTCACCGCACTGCTTCGCAATTGCAGCTATGAAGTGATTCCAGTAGCAAATGGAGTGCAAGCATGGAAGATTCTTGAAGATTTGACTAATCATGTTGATCTAGTCTTAACTGAGGTAGTCATGCCGTGTGTATCAGGCGTTAGCCTTTTAAGCAAGATTATGAGCCATAAGACACGGAAAAATGTTCCTGTGATCATGATGTCATCGCATGATTCAATGGGCCTCGTCTTTAAGTGTTTGTCAAAGGGTGCTGTTGACTTTTTAGTGAAGCCTATTCGAAAGAATGAGCTTAAGAACCTCTGGCAGCACATTTGGAGGAGATGCCATAGTTCTAGTGGTAGTGGAACGGGAAGTGAAAGTGGCAATCAAACTCAAAGGTCTGTAAGATCAAAAAGTGTTGAAAAGTCTGAGAACAATAGCGGAAGCAATGATGAGGAAGATACTGATTTGAATGTTGGAGATGGAAGTGACAATGGGAGTGGCACTCAGAGTTCTTGGACAAAAAGAGCTGTAGAAGTTGACAGTCCGCAACATGCATATTCATGGCCCCATCCCGATAGTACTTGTGCCCAAGTAGTTCACTCAAATGCTGAATCACTTGGTAACAAATTGGTTCCTGCAGCTGCAACAAGGGAGTGCCAGCAACAGAAGGAACAAAATGACAACTTTGCAATGGGAAAAGATCTGGAGACAGGCCTGACCAATTTTGAAGAATTACAGCATGGGCAGCGTACTGATTTTTCAACAAAACTAGCAGGAGCAAGACAGAATAATCTGCTTGAGACAGGTTCCAGTAAACTGGACGAGAAAATTGATAAGGGCAAGCTGAACTTGAATCGTGAGAGTCCTTCCAGCATGCTAAAGTATGATGGTGCTACAATGACAGGTGTTGTAACTAATCCCACTGATTCCCAAATGGACAACACACAATTTGAAGCTTCTAACAGACATTATAACGCCTTAGACGTTAACAATAAGGCGCATAGTAATGTTCATGAAATGTCATCTGTGGAGCTCAGTTTGAAAAGGCTTAGAGGAGTTAAAGGCACTGAGACAACAGTACAAGATGACCGCAATGTGTTGAGACGGTCAGACTCTTCAGCCTTTTCAAGGTATAACACAGCCTCAAATGCTAACAAGGGTCCTTCTGGGCACGTTGGAAGCAATTCTCCACATGATAATAGTGGAGAAGTTACAAAAATGGAATTCTTTCGCGACATTCGATCTCATTCAAGAGATAACCCTCCCAATCAATGCTCAAAAGGAGGCAGCAATATCAATGATATGGGATCCACTACTAATAATGCCCTTCCGAAATCTCAAGTTGCAAACAAGTCAGCAGCAGCATCCACAGTCCAACTTTTGCATCCGTTATCTATTTTCCATCCTGTGAAGGACCTTAAGAGTGCTACCAAACATGTTATAGTAGATAATTCTAACAATGTGGAAACAACAGTACAGGTTCAATCAAGAGACACCCAGAAGCAACTCCAAATCCAGAACCGCCATCATGATTATGATCAGCATCGGGTCCATCACCATGTTGTCCACAATATGCAAGAGCAACAGCTGCGTGATAATAATGATTTATCTTTGAAGAAATTGGCTGCAGCTGCCCCACATTGTGGATCATCGAATGCCCTGACCGGGCCTGTTGAAGGTAACGCTGGAAATTATAGCATCAATGGGAGTGGTTCGGGTAGTAACCATGGGAGCAATGGGCAAACTGGAGGCAGCGGTGGACATAATGTTGGAGGTACAAAGCTAGAAAGTGATTATGGAGTTGCTGGGAAAAGTGGAAGTGGTGATGTTAGCGGAAACCAGAGTGGAAATGGAGTAGATGAAAACAAGTTCAAGCAGAGAGAAGCTGCCTTGACCAAGTTCCGTCAGAAAAGAAAAGAGAGATGCTTCCGAAAAAAGGTTCGGTATCAAAACAGAAAGAAACTGGCAGATCAACGACCTCGAATTCGAGGACAGTTTGTGCGGCATACAATGAGCGAGAACAGGATAACAGATAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0006355 GO:0007154 GO:0007165 GO:0007623 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010017 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045892 GO:0045934 GO:0048511 GO:0048519 GO:0048523 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0080090 GO:0097159 GO:0104004 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

CCT Response_reg

Protein Analysis

773

Amino Acids

84.92

Weight (kDa)

8.49

Isoelectric Point (pI)

37.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004041)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02810 AT5G02810
fragaria_vesca	FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060 FvH4_6g15060
malus_domestica	MD04G1113200.v1.1 MD12G1128600.v1.1
prunus_persica	Prupe.6G244200_v2.0.a1 Prupe.6G244200_v2.0.a1 Prupe.6G244200_v2.0.a1 Prupe.6G244200_v2.0.a1
pyrus_communis	pycom04g10210 pycom12g12520
rosa_chinensis	RchiOBHm_Chr3g0468241
rosa_laevigata	RLG00000024439
rosa_multiflora	Rmu_sc0004524.1_g000003 Rmu_sc0005436.1_g000001
rosa_roxburghii	Rroxscaffold_6G00412880
rosa_rugosa	Rorug03G0094600 Rorug03G0094600 Rorug03G0094700
rosa_samantha	Rh3AG142100 Rh3BG163600 Rh3DG164300
rosa_wichuraiana	Rw3G013450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1251
AccB7I	CCANNNNNTGG	1 cut(s)	1922
AccBSI	CCGCTC	1 cut(s)	51
AccI	GTMKAC	1 cut(s)	215
AccII	CGCG	1 cut(s)	1512
AciI	CCGC	9 cut(s)	49, 303, 717, 824, 1369, 1801, 2034, 2112, 2281
AclWI	GGATC	3 cut(s)	1581, 1594, 1933
AcsI	RAATTY	2 cut(s)	1502, 2262
AcuI	CTGAAG	1 cut(s)	1380
AdeI	CACNNNGTG	1 cut(s)	1922
AfaI	GTAC	5 cut(s)	859, 1030, 1359, 1755, 2056
AfiI	CCNNNNNNNGG	6 cut(s)	55, 1407, 1922, 1944, 1955, 2215
AflII	CTTAAG	2 cut(s)	587, 1697
AflIII	ACRYGT	2 cut(s)	241, 1714
AloI	GAACNNNNNNTCC	2 cut(s)	162, 194
Alw21I	GWGCWC	1 cut(s)	1314
Alw26I	GTCTC	5 cut(s)	980, 1073, 1343, 1375, 1764
AlwI	GGATC	3 cut(s)	1581, 1594, 1933
AoxI	GGCC	4 cut(s)	517, 842, 991, 1946
ApoI	RAATTY	2 cut(s)	1502, 2262
ArsI	GACNNNNNNTTYG	2 cut(s)	2247, 2279
Asp700I	GAANNNNTTC	3 cut(s)	333, 1462, 1506
AspLEI	GCGC	1 cut(s)	1279
AspS9I	GGNCC	6 cut(s)	517, 843, 1439, 1693, 1828, 1946
AsuC2I	CCSGG	1 cut(s)	1945
AsuHPI	GGTGA	3 cut(s)	292, 1826, 2114
AsuII	TTCGAA	1 cut(s)	574
AvaII	GGWCC	3 cut(s)	1439, 1693, 1828
BaeGI	GKGCMC	2 cut(s)	868, 1452
BamHI	GGATCC	1 cut(s)	1586
BanII	GRGCYC	1 cut(s)	1314
Bbv12I	GWGCWC	1 cut(s)	1314
BccI	CCATC	6 cut(s)	752, 855, 1160, 1689, 1812, 1839
BceAI	ACGGC	1 cut(s)	406
BclI	TGATCA	2 cut(s)	489, 1816
BcnI	CCSGG	1 cut(s)	1945
BcoDI	GTCTC	5 cut(s)	980, 1073, 1343, 1375, 1764
BfaI	CTAG	5 cut(s)	167, 398, 630, 1049, 2063
BfmI	CTRYAG	3 cut(s)	807, 915, 1905
BfrI	CTTAAG	2 cut(s)	587, 1697
BglII	AGATCT	2 cut(s)	248, 979
BmcAI	AGTACT	1 cut(s)	859
Bme1390I	CCNGG	1 cut(s)	1945
Bme18I	GGWCC	3 cut(s)	1439, 1693, 1828
BmgT120I	GGNCC	6 cut(s)	517, 843, 1439, 1693, 1828, 1946
BmiI	GGNNCC	6 cut(s)	845, 912, 1087, 1440, 1588, 1829
BmrFI	CCNGG	1 cut(s)	1945
BmsI	GCATC	6 cut(s)	608, 1652, 1672, 1831, 1986, 2192
BplI	GAGNNNNNCTC	2 cut(s)	766, 798
BpmI	CTGGAG	3 cut(s)	168, 1004, 2046
Bpu14I	TTCGAA	1 cut(s)	574
BpuEI	CTTGAG	3 cut(s)	192, 1097, 1602
BpuMI	CCSGG	1 cut(s)	1945
BsaBI	GATNNNNATC	2 cut(s)	1815, 1821
BsaJI	CCNNGG	1 cut(s)	2005
BsaXI	ACNNNNNCTCC	2 cut(s)	162, 192
Bsc4I	CCNNNNNNNGG	6 cut(s)	55, 1407, 1922, 1944, 1955, 2215
Bse1I	ACTGG	5 cut(s)	338, 1089, 1101, 2029, 2247
Bse3DI	GCAATG	4 cut(s)	730, 975, 1378, 2020
Bse8I	GATNNNNATC	2 cut(s)	1815, 1821
BseDI	CCNNGG	1 cut(s)	2005
BseGI	GGATG	5 cut(s)	100, 847, 1643, 1663, 1681
BseJI	GATNNNNATC	2 cut(s)	1815, 1821
BseLI	CCNNNNNNNGG	6 cut(s)	55, 1407, 1922, 1944, 1955, 2215
BseMI	GCAATG	4 cut(s)	730, 975, 1378, 2020
BseMII	CTCAG	5 cut(s)	399, 696, 797, 1327, 1338
BseNI	ACTGG	5 cut(s)	338, 1089, 1101, 2029, 2247
BseRI	GAGGAG	2 cut(s)	628, 1347
BseSI	GKGCMC	2 cut(s)	868, 1452
BseYI	CCCAGC	2 cut(s)	225, 2084
Bsh1236I	CGCG	1 cut(s)	1512
BshFI	GGCC	4 cut(s)	519, 844, 993, 1948
BsiHKAI	GWGCWC	1 cut(s)	1314
BsiSI	CCGG	1 cut(s)	1944
BslI	CCNNNNNNNGG	6 cut(s)	55, 1407, 1922, 1944, 1955, 2215
BsmAI	GTCTC	5 cut(s)	980, 1073, 1343, 1375, 1764
BsmBI	CGTCTC	1 cut(s)	1375
BsmI	GAATGC	1 cut(s)	1939
BsnI	GGCC	4 cut(s)	519, 844, 993, 1948
Bsp119I	TTCGAA	1 cut(s)	574
Bsp1286I	GDGCHC	3 cut(s)	868, 1314, 1452
Bsp19I	CCATGG	1 cut(s)	2005
Bsp68I	TCGCGA	1 cut(s)	1512
BspACI	CCGC	9 cut(s)	49, 303, 717, 824, 1369, 1801, 2034, 2112, 2281
BspANI	GGCC	4 cut(s)	519, 844, 993, 1948
BspCNI	CTCAG	5 cut(s)	400, 697, 796, 1326, 1339
BspFNI	CGCG	1 cut(s)	1512
BspHI	TCATGA	3 cut(s)	492, 1291, 1807
BspLI	GGNNCC	6 cut(s)	845, 912, 1087, 1440, 1588, 1829
BspMAI	CTGCAG	2 cut(s)	919, 1909
BspPI	GGATC	3 cut(s)	1581, 1594, 1933
BspQI	GCTCTTC	1 cut(s)	136
BspT104I	TTCGAA	1 cut(s)	574
BspTI	CTTAAG	2 cut(s)	587, 1697
BsrBI	CCGCTC	1 cut(s)	51
BsrDI	GCAATG	4 cut(s)	730, 975, 1378, 2020
BsrI	ACTGG	5 cut(s)	338, 1089, 1101, 2029, 2247
BssECI	CCNNGG	1 cut(s)	2005
BssT1I	CCWWGG	1 cut(s)	2005
Bst4CI	ACNGT	9 cut(s)	33, 193, 220, 821, 1357, 1386, 1651, 1753, 2274
Bst6I	CTCTTC	2 cut(s)	136, 1399
BstAFI	CTTAAG	2 cut(s)	587, 1697
BstAPI	GCANNNNNTGC	1 cut(s)	1867
BstBI	TTCGAA	1 cut(s)	574
BstC8I	GCNNGC	4 cut(s)	357, 938, 1121, 1154
BstDEI	CTNAG	7 cut(s)	408, 705, 783, 1258, 1313, 1328, 1347
BstDSI	CCRYGG	1 cut(s)	2005
BstENI	CCTNNNNNAGG	2 cut(s)	1405, 1953
BstF5I	GGATG	5 cut(s)	100, 847, 1643, 1663, 1681
BstFNI	CGCG	1 cut(s)	1512
BstHHI	GCGC	1 cut(s)	1279
BstMAI	GTCTC	5 cut(s)	980, 1073, 1343, 1375, 1764
BstMWI	GCNNNNNNNGC	7 cut(s)	182, 321, 447, 1024, 1427, 1867, 1910
BstNSI	RCATGY	4 cut(s)	245, 833, 1156, 1718
BstSCI	CCNGG	1 cut(s)	1943
BstSFI	CTRYAG	3 cut(s)	807, 915, 1905
BstSLI	GKGCMC	2 cut(s)	868, 1452
BstUI	CGCG	1 cut(s)	1512
BstX2I	RGATCY	3 cut(s)	248, 979, 1586
BstXI	CCANNNNNNTGG	1 cut(s)	1096
BstYI	RGATCY	3 cut(s)	248, 979, 1586
BsuRI	GGCC	4 cut(s)	519, 844, 993, 1948
BtgI	CCRYGG	1 cut(s)	2005
BtgZI	GCGATG	1 cut(s)	486
BtsCI	GGATG	5 cut(s)	100, 847, 1643, 1663, 1681
BtsI	GCAGTG	1 cut(s)	305
BtsIMutI	CAGTG	3 cut(s)	305, 1200, 1344
BtuMI	TCGCGA	1 cut(s)	1512
Cac8I	GCNNGC	4 cut(s)	357, 938, 1121, 1154
CciI	TCATGA	3 cut(s)	492, 1291, 1807
CfoI	GCGC	1 cut(s)	1279
Cfr13I	GGNCC	6 cut(s)	517, 843, 1439, 1693, 1828, 1946
Csp6I	GTAC	5 cut(s)	858, 1029, 1358, 1754, 2055
CspCI	CAANNNNNGTGG	4 cut(s)	757, 792, 1969, 2004
CviQI	GTAC	5 cut(s)	858, 1029, 1358, 1754, 2055
DdeI	CTNAG	7 cut(s)	408, 705, 783, 1258, 1313, 1328, 1347
DraIII	CACNNNGTG	1 cut(s)	1922
Eam1104I	CTCTTC	2 cut(s)	136, 1399
EarI	CTCTTC	2 cut(s)	136, 1399
Ecl136II	GAGCTC	1 cut(s)	1312
Eco130I	CCWWGG	1 cut(s)	2005
Eco147I	AGGCCT	1 cut(s)	993
Eco24I	GRGCYC	1 cut(s)	1314
Eco47I	GGWCC	3 cut(s)	1439, 1693, 1828
Eco53kI	GAGCTC	1 cut(s)	1312
Eco57I	CTGAAG	1 cut(s)	1380
EcoICRI	GAGCTC	1 cut(s)	1312
EcoNI	CCTNNNNNAGG	2 cut(s)	1405, 1953
EcoO109I	RGGNCCY	2 cut(s)	1439, 1693
EcoRI	GAATTC	2 cut(s)	1502, 2262
EcoT14I	CCWWGG	1 cut(s)	2005
EcoT22I	ATGCAT	1 cut(s)	835
EcoT38I	GRGCYC	1 cut(s)	1314
ErhI	CCWWGG	1 cut(s)	2005
Esp3I	CGTCTC	1 cut(s)	1375
FalI	AAGNNNNNCTT	2 cut(s)	1112, 1144
FbaI	TGATCA	2 cut(s)	489, 1816
FblI	GTMKAC	1 cut(s)	215
FokI	GGATG	5 cut(s)	107, 834, 1630, 1650, 1668
FriOI	GRGCYC	1 cut(s)	1314
FspBI	CTAG	5 cut(s)	167, 398, 630, 1049, 2063
GlaI	GCGC	1 cut(s)	1278
GsaI	CCCAGC	2 cut(s)	229, 2088
GsuI	CTGGAG	3 cut(s)	168, 1004, 2046
HaeIII	GGCC	4 cut(s)	519, 844, 993, 1948
HapII	CCGG	1 cut(s)	1944
HhaI	GCGC	1 cut(s)	1279
Hin6I	GCGC	1 cut(s)	1277
HinP1I	GCGC	1 cut(s)	1277
HincII	GTYRAC	4 cut(s)	216, 553, 817, 1267
HindII	GTYRAC	4 cut(s)	216, 553, 817, 1267
HindIII	AAGCTT	1 cut(s)	1233
HpaI	GTTAAC	1 cut(s)	1267
HpaII	CCGG	1 cut(s)	1944
HphI	GGTGA	3 cut(s)	292, 1826, 2114
Hpy166II	GTNNAC	8 cut(s)	216, 553, 817, 877, 1094, 1267, 1846, 2039
Hpy188I	TCNGA	6 cut(s)	706, 786, 1390, 1611, 2187, 2210
Hpy8I	GTNNAC	8 cut(s)	216, 553, 817, 877, 1094, 1267, 1846, 2039
Hpy99I	CGWCG	1 cut(s)	220
HpyAV	CCTTC	6 cut(s)	940, 1155, 1452, 1616, 1684, 1949
HpyCH4III	ACNGT	9 cut(s)	33, 193, 220, 821, 1357, 1386, 1651, 1753, 2274
HpyCH4IV	ACGT	2 cut(s)	1263, 1452
HpyF10VI	GCNNNNNNNGC	7 cut(s)	182, 321, 447, 1024, 1427, 1867, 1910
HpyF3I	CTNAG	7 cut(s)	408, 705, 783, 1258, 1313, 1328, 1347
HpySE526I	ACGT	2 cut(s)	1263, 1452
HspAI	GCGC	1 cut(s)	1277
Ksp22I	TGATCA	2 cut(s)	489, 1816
KspAI	GTTAAC	1 cut(s)	1267
LguI	GCTCTTC	1 cut(s)	136
LmnI	GCTCC	3 cut(s)	1055, 1309, 2010
LweI	GCATC	6 cut(s)	608, 1652, 1672, 1831, 1986, 2192
MaeI	CTAG	5 cut(s)	167, 398, 630, 1049, 2063
MaeII	ACGT	2 cut(s)	1263, 1452
MbiI	CCGCTC	1 cut(s)	51
MboII	GAAGA	8 cut(s)	131, 153, 376, 386, 746, 1019, 1386, 1906
MfeI	CAATTG	1 cut(s)	316
MflI	RGATCY	3 cut(s)	248, 979, 1586
MhlI	GDGCHC	3 cut(s)	868, 1314, 1452
MlyI	GAGTC	3 cut(s)	134, 1150, 1385
MmeI	TCCRAC	5 cut(s)	15, 733, 1435, 1678, 2029
Mph1103I	ATGCAT	1 cut(s)	835
MroXI	GAANNNNTTC	3 cut(s)	333, 1462, 1506
MseI	TTAA	9 cut(s)	9, 255, 404, 446, 528, 588, 1266, 1338, 1698
MslI	CAYNNNNRTG	5 cut(s)	838, 882, 1284, 1812, 1836
MspA1I	CMGCKG	4 cut(s)	920, 1867, 1910, 2034
MspCI	CTTAAG	2 cut(s)	587, 1697
MspI	CCGG	1 cut(s)	1944
MspR9I	CCNGG	1 cut(s)	1945
MunI	CAATTG	1 cut(s)	316
Mva1269I	GAATGC	1 cut(s)	1939
MvnI	CGCG	1 cut(s)	1512
MwoI	GCNNNNNNNGC	7 cut(s)	182, 321, 447, 1024, 1427, 1867, 1910
NciI	CCSGG	1 cut(s)	1945
NcoI	CCATGG	1 cut(s)	2005
NlaIV	GGNNCC	6 cut(s)	845, 912, 1087, 1440, 1588, 1829
NmuCI	GTSAC	3 cut(s)	14, 298, 764
NruI	TCGCGA	1 cut(s)	1512
NsiI	ATGCAT	1 cut(s)	835
NspI	RCATGY	4 cut(s)	245, 833, 1156, 1718
NspV	TTCGAA	1 cut(s)	574
PaeI	GCATGC	1 cut(s)	1156
PagI	TCATGA	3 cut(s)	492, 1291, 1807
PceI	AGGCCT	1 cut(s)	993
PciI	ACATGT	2 cut(s)	241, 1714
PciSI	GCTCTTC	1 cut(s)	136
PcsI	WCGNNNNNNNCGW	2 cut(s)	1260, 1516
PctI	GAATGC	1 cut(s)	1939
PdmI	GAANNNNTTC	3 cut(s)	333, 1462, 1506
PfeI	GAWTC	7 cut(s)	281, 334, 367, 509, 890, 1132, 1205
PflMI	CCANNNNNTGG	1 cut(s)	1922
PleI	GAGTC	3 cut(s)	133, 1149, 1385
PpsI	GAGTC	3 cut(s)	133, 1149, 1385
PpuMI	RGGWCCY	2 cut(s)	1439, 1693
PscI	ACATGT	2 cut(s)	241, 1714
PsiI	TTATAA	1 cut(s)	1251
Psp124BI	GAGCTC	1 cut(s)	1314
Psp5II	RGGWCCY	2 cut(s)	1439, 1693
PspFI	CCCAGC	2 cut(s)	225, 2084
PspN4I	GGNNCC	6 cut(s)	845, 912, 1087, 1440, 1588, 1829
PspPI	GGNCC	6 cut(s)	517, 843, 1439, 1693, 1828, 1946
PspPPI	RGGWCCY	2 cut(s)	1439, 1693
PstI	CTGCAG	2 cut(s)	919, 1909
PsuI	RGATCY	3 cut(s)	248, 979, 1586
PvuII	CAGCTG	3 cut(s)	920, 1867, 1910
RruI	TCGCGA	1 cut(s)	1512
RsaI	GTAC	5 cut(s)	859, 1030, 1359, 1755, 2056
RsaNI	GTAC	5 cut(s)	858, 1029, 1358, 1754, 2055
RseI	CAYNNNNRTG	5 cut(s)	838, 882, 1284, 1812, 1836
SacI	GAGCTC	1 cut(s)	1314
SalI	GTCGAC	1 cut(s)	214
SapI	GCTCTTC	1 cut(s)	136
SaqAI	TTAA	9 cut(s)	9, 255, 404, 446, 528, 588, 1266, 1338, 1698
Sau96I	GGNCC	6 cut(s)	517, 843, 1439, 1693, 1828, 1946
ScaI	AGTACT	1 cut(s)	859
SchI	GAGTC	3 cut(s)	134, 1150, 1385
ScrFI	CCNGG	1 cut(s)	1945
SduI	GDGCHC	3 cut(s)	868, 1314, 1452
SfaNI	GCATC	6 cut(s)	608, 1652, 1672, 1831, 1986, 2192
SfcI	CTRYAG	3 cut(s)	807, 915, 1905
SfuI	TTCGAA	1 cut(s)	574
SinI	GGWCC	3 cut(s)	1439, 1693, 1828
SmiMI	CAYNNNNRTG	5 cut(s)	838, 882, 1284, 1812, 1836
SmlI	CTYRAG	5 cut(s)	207, 587, 1076, 1617, 1697
SmoI	CTYRAG	5 cut(s)	207, 587, 1076, 1617, 1697
SphI	GCATGC	1 cut(s)	1156
SseBI	AGGCCT	1 cut(s)	993
SsiI	CCGC	9 cut(s)	49, 303, 717, 824, 1369, 1801, 2034, 2112, 2281
SspMI	CTAG	5 cut(s)	167, 398, 630, 1049, 2063
SstI	GAGCTC	1 cut(s)	1314
StuI	AGGCCT	1 cut(s)	993
StyD4I	CCNGG	1 cut(s)	1943
StyI	CCWWGG	1 cut(s)	2005
TaaI	ACNGT	9 cut(s)	33, 193, 220, 821, 1357, 1386, 1651, 1753, 2274
TaiI	ACGT	2 cut(s)	1266, 1455
TaqI	TCGA	8 cut(s)	114, 128, 215, 574, 1519, 1931, 2260, 2266
TatI	WGTACW	3 cut(s)	857, 1357, 1753
TauI	GCSGC	1 cut(s)	2284
TfiI	GAWTC	7 cut(s)	281, 334, 367, 509, 890, 1132, 1205
Tru1I	TTAA	9 cut(s)	9, 255, 404, 446, 528, 588, 1266, 1338, 1698
Tru9I	TTAA	9 cut(s)	9, 255, 404, 446, 528, 588, 1266, 1338, 1698
TscAI	CASTG	3 cut(s)	312, 1207, 1351
TseFI	GTSAC	3 cut(s)	14, 298, 764
Tsp45I	GTSAC	3 cut(s)	14, 298, 764
TspDTI	ATGAA	6 cut(s)	17, 342, 828, 1280, 1308, 2154
TspGWI	ACGGA	3 cut(s)	487, 1656, 2171
TspRI	CASTG	3 cut(s)	312, 1207, 1351
Van91I	CCANNNNNTGG	1 cut(s)	1922
Vha464I	CTTAAG	2 cut(s)	587, 1697
VpaK11BI	GGWCC	3 cut(s)	1439, 1693, 1828
XagI	CCTNNNNNAGG	2 cut(s)	1405, 1953
XapI	RAATTY	2 cut(s)	1502, 2262
XceI	RCATGY	4 cut(s)	245, 833, 1156, 1718
XcmI	CCANNNNNNNNNTGG	3 cut(s)	629, 2012, 2126
XmiI	GTMKAC	1 cut(s)	215
XmnI	GAANNNNTTC	3 cut(s)	333, 1462, 1506
XspI	CTAG	5 cut(s)	167, 398, 630, 1049, 2063
ZrmI	AGTACT	1 cut(s)	859
Zsp2I	ATGCAT	1 cut(s)	835

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.