Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0017189

Physical Location & Seq

Genomic Coordinates Forward (+)

9522035 .. 9524266

Gene Structure 2232 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g15290.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2232 bp

ATGAACCTCAACCCTCCTCCTCCACCTTCCCCATTAGCCTCCATTTCTAACCCTCTTTCCCACTCTCTCACTCTCCACCGGGTCTCTTTTCCCTCCTCCATTTCCACCCCCACGCGCCCTTTTCGACTCCACGCCACCGCCTCCACCCCCGCCAACCCAGCCGCAGACTTCACTCTCACCACCGTCACCGCCGCCGATGACGACGACGGCGACACACCAGTATCCAATGAAGACCAGAAGCTTCTGACCCTCCTCCGCCAGAGAAAAACAGAAGAGGCTTGGATTCTCTACACCCAATACTCCCACCTCCCCAATCCCACTTGCCTCAGCCGCCTGCTTTCTCAGTTGTCTTACCAGAACACCCGCACCAGCCTCACGCGCGCCCAGTCCATCATCACGCGCCTCCGCGATGAGCGCCAGCTCCGCCACCTCGACGCCAACTCCCTCGGCCTCCTTGCCGTCGCCGCAGCCAAGGCCGGTCAGACCCGCTACGCCACCTCCATCGTCAAGTCCATGCTCCGCTCCGGGTTCCTCCCCCACGTCAAGGCTTGGAGCGCCGTCGTCAGCCGCCTCGCCGCTTCCGGCGACGACGGCCCTGCCGAGGCCCTGAAGCTGTTTTATTCGGTCACGCGCCGTGTCCGGAGGTTCGCCGAGCCGGAGCTGGTGGCGGACTCGCGGCCGGACACGGCGGCGTTCAATGCGGCGCTTAACGCTTGTGCTAATTTGGGGGATTCGGATAGGTTCTTGAAGCTGTTCGACGAAATGCCTGAGTCAGGCGCCGAGCCGGATGTGCTTACTTACAATGTTATGATCAAGCTCTGTGCCAGAGTTGGAAGGAAGGACTTGCTTGTTTTCGTGTTGGAGAGGATTTTGGACCAGGGAATTACTGTGTGTATGACTACATTGAACTCGCTGGTTGCGGCTTATGTTGGTTTCGGAGACTTGGAAACCGCGGAGAAGATGGTTCAGGCAATGAGGGAAGGGAGAAGAGACCTCTGCAAGATTTTAAGGGAGGCGAATTTGAGGAATTCGAATTCGAGTGGGAGAGATGGGAATGTGTTTGAGAAGTTGCTTCCGAATTCTGTTACAGCTAGTGAATGTGAGCCACCGTTGTTGCCAAAAGCGTATACTGCTAACTCTAGGATTTACACTACACTGATGAAGGGTTACATGAATGCTGGGCGTGTTATTGACACTGTTCGGATGCTTGAGGCACTGAGGCACCAGGATGATAGCTCGAGTCAGCCTGACCATGTGACATATACGACTGTTGTTTCTGCATTTGTGAAGGCGGGTTCCATGGACCGTGCTCGCAGGGTGCTGGCTGAGATGACAAGAGTTGGTGTGCCTGCAAATAGGATTACATATAACATTCTTCTCAAGGGTTATTGTCAGCAGCTGCAGATAGACCAGGCAAAGGAGTTGGTTAGAGAGATGACTGAGGATGCAGGGATTGAGCCTGATGTGGTTTCATATAACATCTTGATCGATGGGTGCATACAGGTTGATGACAGTGCCCGTGCTCTTGCTTTTTTCAACGAAATGAGAGCAAAAGGAATCGCTCCTACCAAGATCAGCTACACCACGTTGATGAAAGCTTTTGCCTTGTCCGGACAGCCTAAGCTGGCTAACAAGGTGTTCGATGAAATGCTCAATGATCCACGGGTGAAGGCTGATTTGGTAGCTTGGAACATGTTGGTTGAAGGGTATTGCAGACTGGGATTGGTTGAAGAATCCAAGAAAATCATTCAGAGAATGAAAGAGCACGGGTTTCACCCTGATGTGGCTACTTATGGTAGCCTAGCTAATGGGATTGCATTGGCTAGAAAACCAGGAGAGGCACTTTTGCTCTGGAATGAAGTGAAGGACAGATGTACAGCGAAAAAGGAAGGTGAAAAGTCTGATGATGCAGATCCTCCAACACTGAAACCTGATGAAGGGCTATTGGATATTTTGGCTGATATATGTGTTAGGGCTGCTTTCTTCAAGAAGGCTCTGGAAATTGTGGCATGTATGGAAGAGAATGGGATTCCTCCGAACAAGACCAAGTTCACTAAAATCTATGTCGAGATGCACTCGAGGATGTTTACCAGTAAGCATGCCTCACAAGCTAGGCAGGACAGGAGGAGTGAAAGGAAGAGAGCAGCTGAGGCTTTCAAGTTTTGGTTGGGATTACCCAATTCTTATTATGGGAGTGAATGGAGGTTAGGATCTTTGGATGGAGATAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

744

Amino Acids

82.42

Weight (kDa)

8.53

Isoelectric Point (pI)

38.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_At1g68980	PF25245	76 - 193	8.8e-07	At1g68980, TPR repeats
PPR_3	PF13812	226 - 274	1.6e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	227 - 276	7.5e-12	PPR repeat family
TPR_24	PF23276	393 - 514	1.1e-09	Fungal tetratrico peptide repeats
PPR_long	PF17177	401 - 502	2.7e-06	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	415 - 445	1.2e-06	PPR repeat
PPR_3	PF13812	415 - 463	1.7e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	416 - 465	9e-14	PPR repeat family
PPR_1	PF12854	448 - 480	4.6e-08	PPR repeat
PPR_2	PF13041	452 - 500	2.8e-14	PPR repeat family
PPR_3	PF13812	475 - 534	1e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	484 - 516	3.4e-06	PPR repeat
PPR_2	PF13041	487 - 535	3e-14	PPR repeat family
PPR_2	PF13041	559 - 605	2.1e-10	PPR repeat family
PPR	PF01535	561 - 591	4.4e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0017189)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09650
fragaria_vesca	FvH4_6g15290
prunus_persica	Prupe.6G241600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0468701
rosa_laevigata	RLG00000024415
rosa_multiflora	Rmu_sc0011538.1_g000002 Rmu_sc0028512.1_g000001 Rmu_sc0033138.1_g000003
rosa_rugosa	Rorug03G0096200
rosa_samantha	Rh3AG145300 Rh3BG168000 Rh3DG166600
rosa_wichuraiana	Rw3G013690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	776, 1221
AccBSI	CCGCTC	1 cut(s)	522
AccI	GTMKAC	1 cut(s)	1127
AccII	CGCG	8 cut(s)	115, 379, 381, 400, 408, 631, 676, 953
AccIII	TCCGGA	2 cut(s)	639, 1610
AclWI	GGATC	3 cut(s)	1652, 1907, 2218
AcoI	YGGCCR	1 cut(s)	677
AcsI	RAATTY	4 cut(s)	1018, 1027, 1033, 1078
AcuI	CTGAAG	1 cut(s)	629
AcyI	GRCGYC	2 cut(s)	435, 777
AfaI	GTAC	1 cut(s)	1876
AfiI	CCNNNNNNNGG	6 cut(s)	544, 601, 773, 1417, 1783, 1937
AflIII	ACRYGT	1 cut(s)	1692
AgsI	TTSAA	8 cut(s)	697, 748, 907, 1537, 1703, 1730, 1987, 2158
AjiI	CACGTC	1 cut(s)	541
AjnI	CCWGG	4 cut(s)	876, 1224, 1410, 1831
AjuI	GAANNNNNNNTTGG	2 cut(s)	1661, 1693
Alw21I	GWGCWC	3 cut(s)	1312, 1525, 1767
Alw26I	GTCTC	3 cut(s)	88, 933, 984
AlwI	GGATC	3 cut(s)	1652, 1907, 2218
AlwNI	CAGNNNCTG	1 cut(s)	1399
Ama87I	CYCGRG	2 cut(s)	1237, 2077
Aor13HI	TCCGGA	2 cut(s)	639, 1610
AoxI	GGCC	5 cut(s)	448, 474, 592, 603, 677
ApeKI	GCWGC	5 cut(s)	467, 1396, 1399, 1976, 2144
ApoI	RAATTY	4 cut(s)	1018, 1027, 1033, 1078
Asp700I	GAANNNNTTC	1 cut(s)	752
AspLEI	GCGC	9 cut(s)	117, 381, 383, 402, 417, 557, 633, 706, 779
AspS9I	GGNCC	4 cut(s)	593, 604, 874, 1303
AsuC2I	CCSGG	2 cut(s)	80, 526
AsuHPI	GGTGA	5 cut(s)	169, 178, 1678, 1766, 1904
AsuII	TTCGAA	1 cut(s)	1031
AvaI	CYCGRG	2 cut(s)	1237, 2077
AvaII	GGWCC	2 cut(s)	874, 1303
BaeGI	GKGCMC	1 cut(s)	1519
BaeI	ACNNNNGTAYC	2 cut(s)	204, 237
BanI	GGYRCC	2 cut(s)	776, 1221
BbsI	GAAGAC	1 cut(s)	237
Bbv12I	GWGCWC	3 cut(s)	1312, 1525, 1767
BbvCI	CCTCAGC	2 cut(s)	326, 2148
BbvI	GCAGC	5 cut(s)	479, 1386, 1408, 1963, 2156
BccI	CCATC	6 cut(s)	398, 509, 955, 1043, 1484, 2213
BceAI	ACGGC	6 cut(s)	223, 443, 542, 607, 618, 702
BcgI	CGANNNNNNTGC	2 cut(s)	578, 612
BciT130I	CCWGG	4 cut(s)	878, 1226, 1412, 1833
BciVI	GTATCC	1 cut(s)	232
BclI	TGATCA	1 cut(s)	810
BcnI	CCSGG	2 cut(s)	80, 526
BcoDI	GTCTC	3 cut(s)	88, 933, 984
BfaI	CTAG	5 cut(s)	1092, 1140, 1802, 1824, 2112
BfmI	CTRYAG	1 cut(s)	1400
BfoI	RGCGCY	4 cut(s)	418, 558, 707, 780
BfuI	GTATCC	1 cut(s)	232
Bme1390I	CCNGG	6 cut(s)	80, 526, 878, 1226, 1412, 1833
Bme18I	GGWCC	2 cut(s)	874, 1303
BmeT110I	CYCGRG	2 cut(s)	1237, 2077
BmgBI	CACGTC	1 cut(s)	541
BmgT120I	GGNCC	4 cut(s)	593, 604, 874, 1303
BmiI	GGNNCC	4 cut(s)	530, 778, 1223, 1297
BmrFI	CCNGG	6 cut(s)	80, 526, 878, 1226, 1412, 1833
BmrI	ACTGGG	2 cut(s)	379, 1727
BmsI	GCATC	4 cut(s)	1194, 1435, 1897, 2061
BmuI	ACTGGG	2 cut(s)	379, 1727
BpiI	GAAGAC	1 cut(s)	237
BplI	GAGNNNNNCTC	2 cut(s)	2060, 2092
Bpu10I	CCTNAGC	3 cut(s)	326, 1620, 2148
Bpu14I	TTCGAA	1 cut(s)	1031
BpuEI	CTTGAG	2 cut(s)	1229, 1364
BpuMI	CCSGG	2 cut(s)	80, 526
Bsa29I	ATCGAT	1 cut(s)	1488
BsaBI	GATNNNNATC	1 cut(s)	1911
BsaHI	GRCGYC	2 cut(s)	435, 777
BsaI	GGTCTC	2 cut(s)	88, 984
BsaJI	CCNNGG	7 cut(s)	445, 471, 600, 877, 951, 1299, 1661
BsaWI	WCCGGW	2 cut(s)	639, 1610
BsaXI	ACNNNNNCTCC	4 cut(s)	425, 455, 482, 512
Bsc4I	CCNNNNNNNGG	6 cut(s)	544, 601, 773, 1417, 1783, 1937
Bse118I	RCCGGY	1 cut(s)	476
Bse1I	ACTGG	4 cut(s)	218, 385, 1722, 2091
Bse3DI	GCAATG	1 cut(s)	978
Bse8I	GATNNNNATC	1 cut(s)	1911
BseAI	TCCGGA	2 cut(s)	639, 1610
BseBI	CCWGG	4 cut(s)	878, 1226, 1412, 1833
BseCI	ATCGAT	1 cut(s)	1488
BseDI	CCNNGG	7 cut(s)	445, 471, 600, 877, 951, 1299, 1661
BseGI	GGATG	6 cut(s)	793, 1209, 1234, 1450, 2088, 2224
BseJI	GATNNNNATC	1 cut(s)	1911
BseLI	CCNNNNNNNGG	6 cut(s)	544, 601, 773, 1417, 1783, 1937
BseMI	GCAATG	1 cut(s)	978
BseMII	CTCAG	7 cut(s)	340, 356, 759, 1208, 1317, 1431, 2139
BseNI	ACTGG	4 cut(s)	218, 385, 1722, 2091
BsePI	GCGCGC	1 cut(s)	379
BseRI	GAGGAG	5 cut(s)	6, 9, 85, 242, 2140
BseSI	GKGCMC	1 cut(s)	1519
BseX3I	CGGCCG	1 cut(s)	677
BseXI	GCAGC	5 cut(s)	479, 1386, 1408, 1963, 2156
BseYI	CCCAGC	2 cut(s)	157, 1178
Bsh1236I	CGCG	8 cut(s)	115, 379, 381, 400, 408, 631, 676, 953
Bsh1285I	CGRYCG	1 cut(s)	680
BshFI	GGCC	5 cut(s)	450, 476, 594, 605, 679
BshNI	GGYRCC	2 cut(s)	776, 1221
BshVI	ATCGAT	1 cut(s)	1488
BsiEI	CGRYCG	1 cut(s)	680
BsiHKAI	GWGCWC	3 cut(s)	1312, 1525, 1767
BsiHKCI	CYCGRG	2 cut(s)	1237, 2077
BsiSI	CCGG	9 cut(s)	79, 477, 525, 582, 640, 656, 680, 785, 1611
BslI	CCNNNNNNNGG	6 cut(s)	544, 601, 773, 1417, 1783, 1937
BsmAI	GTCTC	3 cut(s)	88, 933, 984
BsmI	GAATGC	1 cut(s)	1180
BsnI	GGCC	5 cut(s)	450, 476, 594, 605, 679
Bso31I	GGTCTC	2 cut(s)	88, 984
BsoBI	CYCGRG	2 cut(s)	1237, 2077
Bsp119I	TTCGAA	1 cut(s)	1031
Bsp1286I	GDGCHC	4 cut(s)	1312, 1519, 1525, 1767
Bsp13I	TCCGGA	2 cut(s)	639, 1610
Bsp1407I	TGTACA	1 cut(s)	1874
Bsp143I	GATC	6 cut(s)	810, 1485, 1572, 1657, 1912, 2210
Bsp19I	CCATGG	1 cut(s)	1299
BspANI	GGCC	5 cut(s)	450, 476, 594, 605, 679
BspCNI	CTCAG	7 cut(s)	339, 355, 760, 1209, 1318, 1432, 2140
BspDI	ATCGAT	1 cut(s)	1488
BspEI	TCCGGA	2 cut(s)	639, 1610
BspFNI	CGCG	8 cut(s)	115, 379, 381, 400, 408, 631, 676, 953
BspLI	GGNNCC	4 cut(s)	530, 778, 1223, 1297
BspMAI	CTGCAG	1 cut(s)	1404
BspPI	GGATC	3 cut(s)	1652, 1907, 2218
BspT104I	TTCGAA	1 cut(s)	1031
BspT107I	GGYRCC	2 cut(s)	776, 1221
BspTNI	GGTCTC	2 cut(s)	88, 984
BsrBI	CCGCTC	1 cut(s)	522
BsrDI	GCAATG	1 cut(s)	978
BsrFI	RCCGGY	1 cut(s)	476
BsrGI	TGTACA	1 cut(s)	1874
BsrI	ACTGG	4 cut(s)	218, 385, 1722, 2091
BssAI	RCCGGY	1 cut(s)	476
BssECI	CCNNGG	7 cut(s)	445, 471, 600, 877, 951, 1299, 1661
BssHII	GCGCGC	1 cut(s)	379
BssMI	GATC	6 cut(s)	810, 1485, 1572, 1657, 1912, 2210
BssNAI	GTATAC	1 cut(s)	1128
BssNI	GRCGYC	2 cut(s)	435, 777
BssT1I	CCWWGG	2 cut(s)	471, 1299
Bst1107I	GTATAC	1 cut(s)	1128
Bst2UI	CCWGG	4 cut(s)	878, 1226, 1412, 1833
Bst4CI	ACNGT	7 cut(s)	184, 889, 1110, 1198, 1270, 1307, 1514
Bst6I	CTCTTC	4 cut(s)	267, 982, 2013, 2132
BstACI	GRCGYC	2 cut(s)	435, 777
BstAUI	TGTACA	1 cut(s)	1874
BstBI	TTCGAA	1 cut(s)	1031
BstC8I	GCNNGC	8 cut(s)	335, 381, 419, 1312, 1323, 1350, 1626, 2100
BstDEI	CTNAG	8 cut(s)	326, 342, 768, 1217, 1326, 1440, 1620, 2148
BstDSI	CCRYGG	3 cut(s)	951, 1299, 1661
BstENI	CCTNNNNNAGG	2 cut(s)	771, 1935
BstF5I	GGATG	6 cut(s)	793, 1209, 1234, 1450, 2088, 2224
BstFNI	CGCG	8 cut(s)	115, 379, 381, 400, 408, 631, 676, 953
BstH2I	RGCGCY	4 cut(s)	418, 558, 707, 780
BstHHI	GCGC	9 cut(s)	117, 381, 383, 402, 417, 557, 633, 706, 779
BstKTI	GATC	6 cut(s)	813, 1488, 1575, 1660, 1915, 2213
BstMAI	GTCTC	3 cut(s)	88, 933, 984
BstMBI	GATC	6 cut(s)	810, 1485, 1572, 1657, 1912, 2210
BstMCI	CGRYCG	1 cut(s)	680
BstNI	CCWGG	4 cut(s)	878, 1226, 1412, 1833
BstNSI	RCATGY	3 cut(s)	1696, 2013, 2102
BstSCI	CCNGG	6 cut(s)	78, 524, 876, 1224, 1410, 1831
BstSFI	CTRYAG	1 cut(s)	1400
BstSLI	GKGCMC	1 cut(s)	1519
BstUI	CGCG	8 cut(s)	115, 379, 381, 400, 408, 631, 676, 953
BstV1I	GCAGC	5 cut(s)	479, 1386, 1408, 1963, 2156
BstV2I	GAAGAC	1 cut(s)	237
BstX2I	RGATCY	2 cut(s)	1912, 2210
BstYI	RGATCY	2 cut(s)	1912, 2210
BstZ17I	GTATAC	1 cut(s)	1128
BstZI	CGGCCG	1 cut(s)	677
Bsu15I	ATCGAT	1 cut(s)	1488
BsuI	GTATCC	1 cut(s)	232
BsuRI	GGCC	5 cut(s)	450, 476, 594, 605, 679
BsuTUI	ATCGAT	1 cut(s)	1488
BtgI	CCRYGG	3 cut(s)	951, 1299, 1661
BtgZI	GCGATG	1 cut(s)	423
BtrI	CACGTC	1 cut(s)	541
BtsCI	GGATG	6 cut(s)	793, 1209, 1234, 1450, 2088, 2224
BtsIMutI	CAGTG	5 cut(s)	1154, 1194, 1214, 1519, 1922
Cac8I	GCNNGC	8 cut(s)	335, 381, 419, 1312, 1323, 1350, 1626, 2100
CaiI	CAGNNNCTG	1 cut(s)	1399
CfoI	GCGC	9 cut(s)	117, 381, 383, 402, 417, 557, 633, 706, 779
Cfr10I	RCCGGY	1 cut(s)	476
Cfr13I	GGNCC	4 cut(s)	593, 604, 874, 1303
Cfr42I	CCGCGG	1 cut(s)	954
ClaI	ATCGAT	1 cut(s)	1488
CseI	GACGC	1 cut(s)	443
Csp6I	GTAC	1 cut(s)	1875
CspCI	CAANNNNNGTGG	2 cut(s)	1095, 1130
CviAII	CATG	7 cut(s)	514, 1171, 1253, 1300, 1693, 2010, 2099
CviQI	GTAC	1 cut(s)	1875
DdeI	CTNAG	8 cut(s)	326, 342, 768, 1217, 1326, 1440, 1620, 2148
DinI	GGCGCC	1 cut(s)	778
DpnI	GATC	6 cut(s)	812, 1487, 1574, 1659, 1914, 2212
DpnII	GATC	6 cut(s)	810, 1485, 1572, 1657, 1912, 2210
EaeI	YGGCCR	1 cut(s)	677
EagI	CGGCCG	1 cut(s)	677
Eam1104I	CTCTTC	4 cut(s)	267, 982, 2013, 2132
EarI	CTCTTC	4 cut(s)	267, 982, 2013, 2132
EciI	GGCGGA	3 cut(s)	245, 413, 683
EclXI	CGGCCG	1 cut(s)	677
Eco130I	CCWWGG	2 cut(s)	471, 1299
Eco31I	GGTCTC	2 cut(s)	88, 984
Eco47I	GGWCC	2 cut(s)	874, 1303
Eco52I	CGGCCG	1 cut(s)	677
Eco57I	CTGAAG	1 cut(s)	629
Eco88I	CYCGRG	2 cut(s)	1237, 2077
EcoNI	CCTNNNNNAGG	2 cut(s)	771, 1935
EcoO109I	RGGNCCY	1 cut(s)	604
EcoRI	GAATTC	3 cut(s)	1027, 1033, 1078
EcoRII	CCWGG	4 cut(s)	876, 1224, 1410, 1831
EcoT14I	CCWWGG	2 cut(s)	471, 1299
EgeI	GGCGCC	1 cut(s)	778
EheI	GGCGCC	1 cut(s)	778
ErhI	CCWWGG	2 cut(s)	471, 1299
FaeI	CATG	7 cut(s)	517, 1174, 1256, 1303, 1696, 2013, 2102
FatI	CATG	7 cut(s)	513, 1170, 1252, 1299, 1692, 2009, 2098
FauI	CCCGC	4 cut(s)	157, 371, 494, 1285
FbaI	TGATCA	1 cut(s)	810
FblI	GTMKAC	1 cut(s)	1127
FokI	GGATG	5 cut(s)	800, 1216, 1241, 1457, 2095
FspBI	CTAG	5 cut(s)	1092, 1140, 1802, 1824, 2112
GlaI	GCGC	9 cut(s)	116, 380, 382, 401, 416, 556, 632, 705, 778
GsaI	CCCAGC	2 cut(s)	161, 1182
HaeII	RGCGCY	4 cut(s)	418, 558, 707, 780
HaeIII	GGCC	5 cut(s)	450, 476, 594, 605, 679
HapII	CCGG	9 cut(s)	79, 477, 525, 582, 640, 656, 680, 785, 1611
HgaI	GACGC	1 cut(s)	443
HhaI	GCGC	9 cut(s)	117, 381, 383, 402, 417, 557, 633, 706, 779
Hin1I	GRCGYC	2 cut(s)	435, 777
Hin1II	CATG	7 cut(s)	517, 1174, 1256, 1303, 1696, 2013, 2102
Hin6I	GCGC	9 cut(s)	115, 379, 381, 400, 415, 555, 631, 704, 777
HinP1I	GCGC	9 cut(s)	115, 379, 381, 400, 415, 555, 631, 704, 777
HindIII	AAGCTT	2 cut(s)	239, 1596
HinfI	GANTC	9 cut(s)	126, 283, 671, 731, 770, 1240, 1557, 1733, 2029
HpaII	CCGG	9 cut(s)	79, 477, 525, 582, 640, 656, 680, 785, 1611
HphI	GGTGA	5 cut(s)	169, 178, 1678, 1766, 1904
Hpy166II	GTNNAC	3 cut(s)	1128, 2052, 2088
Hpy188I	TCNGA	9 cut(s)	246, 483, 736, 938, 1077, 1203, 1752, 1903, 2037
Hpy188III	TCNNGA	8 cut(s)	640, 745, 1483, 1611, 1852, 1987, 1997, 2068
Hpy8I	GTNNAC	3 cut(s)	1128, 2052, 2088
Hpy99I	CGWCG	8 cut(s)	206, 209, 437, 464, 563, 590, 593, 761
HpyCH4III	ACNGT	7 cut(s)	184, 889, 1110, 1198, 1270, 1307, 1514
HpyCH4IV	ACGT	2 cut(s)	540, 1586
HpyF3I	CTNAG	8 cut(s)	326, 342, 768, 1217, 1326, 1440, 1620, 2148
HpySE526I	ACGT	2 cut(s)	540, 1586
Hsp92I	GRCGYC	2 cut(s)	435, 777
Hsp92II	CATG	7 cut(s)	517, 1174, 1256, 1303, 1696, 2013, 2102
HspAI	GCGC	9 cut(s)	115, 379, 381, 400, 415, 555, 631, 704, 777
KasI	GGCGCC	1 cut(s)	776
Kpn2I	TCCGGA	2 cut(s)	639, 1610
Ksp22I	TGATCA	1 cut(s)	810
KspI	CCGCGG	1 cut(s)	954
Kzo9I	GATC	6 cut(s)	810, 1485, 1572, 1657, 1912, 2210
LmnI	GCTCC	6 cut(s)	426, 522, 527, 552, 658, 1567
Lsp1109I	GCAGC	5 cut(s)	479, 1386, 1408, 1963, 2156
LweI	GCATC	4 cut(s)	1194, 1435, 1897, 2061
MaeI	CTAG	5 cut(s)	1092, 1140, 1802, 1824, 2112
MaeII	ACGT	2 cut(s)	540, 1586
MaeIII	GTNAC	5 cut(s)	184, 625, 1084, 1166, 1255
MalI	GATC	6 cut(s)	812, 1487, 1574, 1659, 1914, 2212
MbiI	CCGCTC	1 cut(s)	522
MboI	GATC	6 cut(s)	810, 1485, 1572, 1657, 1912, 2210
MboII	GAAGA	9 cut(s)	242, 284, 970, 999, 1367, 1742, 1975, 2030, 2149
MflI	RGATCY	2 cut(s)	1912, 2210
MhlI	GDGCHC	4 cut(s)	1312, 1519, 1525, 1767
MluCI	AATT	8 cut(s)	721, 882, 1018, 1027, 1033, 1078, 2001, 2179
Mly113I	GGCGCC	1 cut(s)	777
MlyI	GAGTC	4 cut(s)	120, 665, 779, 1249
MmeI	TCCRAC	3 cut(s)	811, 840, 1943
MroI	TCCGGA	2 cut(s)	639, 1610
MroXI	GAANNNNTTC	1 cut(s)	752
MseI	TTAA	2 cut(s)	708, 1007
MslI	CAYNNNNRTG	3 cut(s)	1227, 1589, 1779
MspA1I	CMGCKG	3 cut(s)	953, 1399, 2147
MspI	CCGG	9 cut(s)	79, 477, 525, 582, 640, 656, 680, 785, 1611
MspR9I	CCNGG	6 cut(s)	80, 526, 878, 1226, 1412, 1833
Mva1269I	GAATGC	1 cut(s)	1180
MvaI	CCWGG	4 cut(s)	878, 1226, 1412, 1833
MvnI	CGCG	8 cut(s)	115, 379, 381, 400, 408, 631, 676, 953
NarI	GGCGCC	1 cut(s)	777
NciI	CCSGG	2 cut(s)	80, 526
NcoI	CCATGG	1 cut(s)	1299
NdeII	GATC	6 cut(s)	810, 1485, 1572, 1657, 1912, 2210
NlaIII	CATG	7 cut(s)	517, 1174, 1256, 1303, 1696, 2013, 2102
NlaIV	GGNNCC	4 cut(s)	530, 778, 1223, 1297
NmeAIII	GCCGAG	4 cut(s)	426, 625, 676, 805
NmuCI	GTSAC	3 cut(s)	184, 625, 1255
NspI	RCATGY	3 cut(s)	1696, 2013, 2102
NspV	TTCGAA	1 cut(s)	1031
PaeI	GCATGC	1 cut(s)	2102
PaeR7I	CTCGAG	2 cut(s)	1237, 2077
PauI	GCGCGC	1 cut(s)	379
PciI	ACATGT	1 cut(s)	1692
PcsI	WCGNNNNNNNCGW	2 cut(s)	207, 597
PctI	GAATGC	1 cut(s)	1180
PdmI	GAANNNNTTC	1 cut(s)	752
PfeI	GAWTC	5 cut(s)	283, 731, 1557, 1733, 2029
PleI	GAGTC	4 cut(s)	120, 665, 778, 1248
PluTI	GGCGCC	1 cut(s)	780
PpsI	GAGTC	4 cut(s)	120, 665, 778, 1248
PscI	ACATGT	1 cut(s)	1692
Psp6I	CCWGG	4 cut(s)	876, 1224, 1410, 1831
PspFI	CCCAGC	2 cut(s)	157, 1178
PspGI	CCWGG	4 cut(s)	876, 1224, 1410, 1831
PspN4I	GGNNCC	4 cut(s)	530, 778, 1223, 1297
PspPI	GGNCC	4 cut(s)	593, 604, 874, 1303
PspXI	VCTCGAGB	2 cut(s)	1237, 2077
PstI	CTGCAG	1 cut(s)	1404
PstNI	CAGNNNCTG	1 cut(s)	1399
PsuI	RGATCY	2 cut(s)	1912, 2210
PteI	GCGCGC	1 cut(s)	379
PvuII	CAGCTG	2 cut(s)	1399, 2147
RsaI	GTAC	1 cut(s)	1876
RsaNI	GTAC	1 cut(s)	1875
RseI	CAYNNNNRTG	3 cut(s)	1227, 1589, 1779
SacII	CCGCGG	1 cut(s)	954
SaqAI	TTAA	2 cut(s)	708, 1007
Sau3AI	GATC	6 cut(s)	810, 1485, 1572, 1657, 1912, 2210
Sau96I	GGNCC	4 cut(s)	593, 604, 874, 1303
SchI	GAGTC	4 cut(s)	120, 665, 779, 1249
ScrFI	CCNGG	6 cut(s)	80, 526, 878, 1226, 1412, 1833
SduI	GDGCHC	4 cut(s)	1312, 1519, 1525, 1767
SfaNI	GCATC	4 cut(s)	1194, 1435, 1897, 2061
SfcI	CTRYAG	1 cut(s)	1400
SfoI	GGCGCC	1 cut(s)	778
Sfr274I	CTCGAG	2 cut(s)	1237, 2077
Sfr303I	CCGCGG	1 cut(s)	954
SfuI	TTCGAA	1 cut(s)	1031
SgrBI	CCGCGG	1 cut(s)	954
SinI	GGWCC	2 cut(s)	874, 1303
SlaI	CTCGAG	2 cut(s)	1237, 2077
SmiMI	CAYNNNNRTG	3 cut(s)	1227, 1589, 1779
SmlI	CTYRAG	4 cut(s)	1208, 1237, 1379, 2077
SmoI	CTYRAG	4 cut(s)	1208, 1237, 1379, 2077
SphI	GCATGC	1 cut(s)	2102
Sse9I	AATT	8 cut(s)	721, 882, 1018, 1027, 1033, 1078, 2001, 2179
SspDI	GGCGCC	1 cut(s)	776
SspMI	CTAG	5 cut(s)	1092, 1140, 1802, 1824, 2112
StyD4I	CCNGG	6 cut(s)	78, 524, 876, 1224, 1410, 1831
StyI	CCWWGG	2 cut(s)	471, 1299
TaaI	ACNGT	7 cut(s)	184, 889, 1110, 1198, 1270, 1307, 1514
TaiI	ACGT	2 cut(s)	543, 1589
TaqII	GACCGA	1 cut(s)	613
TasI	AATT	8 cut(s)	721, 882, 1018, 1027, 1033, 1078, 2001, 2179
TatI	WGTACW	1 cut(s)	1874
TfiI	GAWTC	5 cut(s)	283, 731, 1557, 1733, 2029
Tru1I	TTAA	2 cut(s)	708, 1007
Tru9I	TTAA	2 cut(s)	708, 1007
TscAI	CASTG	5 cut(s)	1161, 1201, 1221, 1519, 1929
TseFI	GTSAC	3 cut(s)	184, 625, 1255
TseI	GCWGC	5 cut(s)	467, 1396, 1399, 1976, 2144
Tsp45I	GTSAC	3 cut(s)	184, 625, 1255
TspRI	CASTG	5 cut(s)	1161, 1201, 1221, 1519, 1929
VpaK11BI	GGWCC	2 cut(s)	874, 1303
XagI	CCTNNNNNAGG	2 cut(s)	771, 1935
XapI	RAATTY	4 cut(s)	1018, 1027, 1033, 1078
XceI	RCATGY	3 cut(s)	1696, 2013, 2102
XhoI	CTCGAG	2 cut(s)	1237, 2077
XmiI	GTMKAC	1 cut(s)	1127
XmnI	GAANNNNTTC	1 cut(s)	752
XspI	CTAG	5 cut(s)	1092, 1140, 1802, 1824, 2112

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.