Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0017189

Physical Location & Seq

Genomic Coordinates Forward (+)

14651147 .. 14652801

Gene Structure 1655 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ43457

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1365 bp

ATGAACCTCAAACCACCTCCACCATCTTCACCATTACCCACCAATTCAAACCATCCACTCCCTCTAACCCACACCCTCACTCTCCACTGGGTCTCTCCCCCTCCTTATCCCTCCTCCATTTCCAAACCCACGCGCCCATTTCGCCTCCACGCCACCGCCGCCAACCCCGCCAACCCAGCCGCTGACTTAACTCTCACAACCGCCGCCGACCCACCAATATCTAATGAAGACCAGAAGCTTCTAATCCTCCTCCGCCAGAGAAAAACAGAAGATGCTTGGATTCTCTACACCCAATCCTCCCGCCTCCCCAATCCCACTTGCCTCAGCCGCTTGCTCTCCCAGCTGTCCTACCAGAACACTCGCACCAGCCTCACGCGCGCCCAGTCCATCATCACGCGCCTCCGCAATGAGCGCCAGCTCCGCCACCTCGACGCCAACTCCCTCGGCCTCCTCGCCGTCGCCGCCTCCAAGGCCGGCCAGACCCGCTACGCCACCTCCATCGTCAAGTCCATGCTCCGCTCCGGCTTCCTCCCCCACGTCAAGGCCTGGAGCGCCGTCGTCAGCCGCCTCGCTGCCTCCGGCGACGACGGCCCTTCCGAAGCGCTCAAGCTCTTCTATTCCGTCACGCGCCGCGTCCGGAGGTTCGCCGAGCCGGAGCTGGTGGCGGACTCGCGGCCGGACACGGCGGCGTTCAATGCCGCGCTGAATGCTTGTGCTAATTTGGGTGATACAGATAGGTTCTTGAAGCTGTTCGACGAAATGCCTGAGTCAGGTGCCGAGCCGGATGTGCTTACTTATAATGTGATGATCAAGCTCTGCGCTAGAGTTGGAAGGAAGGACTTGCTTGTTTTTGTGTTGGAGAGGATTTTGGAGCAGGGGATCACAGTGTGTATGACTACATTGAATTCCCTCGTTGCGGCTTATGTTGGTTTCGGAGACTTGGAAACTGCGGAGAGGATGGTTCAGGCAATGAGGGAAGGGAGGAGAGACCTCTGCAAGATTCTAAGGGAGGCAAATTTGAGGAGTTCGAATTCTAGTGGAAGAGATGGGGATGTGTTTGAGAGGTTGCTTCCGAATTCAGTTACAGCTAGTGAACGTGAGCCGCCATTGTTGCCAAAAGCGTATACTTCTAACTCGAGGATTTACACTACACTGATGAAGGGTTATATGAATGCTGGGCGTGTTACTGACACGGTTCGGATGCTAGAGGCACTGAGGCACCAGGATGATAGCTCGAGTCAGCCTGACCATGTGACATATACAACTGTTATTTCTGCATTTGTGAAGGCGGGTTCCATGGACCGTGCTCGCAGGGTTCTAGCTGAGATGACGAGAGTTGGCGTGCCTGCAAATCGGATAACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

454

Amino Acids

50.16

Weight (kDa)

9.7

Isoelectric Point (pI)

46.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_At1g68980	PF25245	76 - 192	7.3e-07	At1g68980, TPR repeats
PPR_3	PF13812	225 - 273	7.7e-09	Pentatricopeptide repeat domain
PPR_2	PF13041	226 - 275	2.6e-12	PPR repeat family
PPR_1	PF12854	414 - 444	1.2e-07	PPR repeat
PPR_2	PF13041	415 - 454	8.9e-08	PPR repeat family
PPR	PF01535	418 - 448	4e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0017189)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09650
fragaria_vesca	FvH4_6g15290
prunus_persica	Prupe.6G241600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0468701
rosa_laevigata	RLG00000024415
rosa_multiflora	Rmu_sc0011538.1_g000002 Rmu_sc0028512.1_g000001 Rmu_sc0033138.1_g000003
rosa_rugosa	Rorug03G0096200
rosa_samantha	Rh3AG145300 Rh3BG168000 Rh3DG166600
rosa_wichuraiana	Rw3G013690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	798
AccB1I	GGYRCC	2 cut(s)	773, 1218
AccBSI	CCGCTC	1 cut(s)	519
AccI	GTMKAC	1 cut(s)	1124
AccII	CGCG	8 cut(s)	133, 376, 378, 397, 628, 633, 673, 701
AccIII	TCCGGA	1 cut(s)	636
AclWI	GGATC	1 cut(s)	887
AcoI	YGGCCR	2 cut(s)	475, 674
AcsI	RAATTY	4 cut(s)	904, 1015, 1030, 1075
AcyI	GRCGYC	1 cut(s)	432
AdeI	CACNNNGTG	1 cut(s)	888
AfeI	AGCGCT	1 cut(s)	603
AfiI	CCNNNNNNNGG	3 cut(s)	541, 770, 916
AgsI	TTSAA	4 cut(s)	48, 694, 745, 904
AjiI	CACGTC	1 cut(s)	538
AjnI	CCWGG	2 cut(s)	545, 1221
Alw21I	GWGCWC	1 cut(s)	1309
Alw26I	GTCTC	3 cut(s)	97, 930, 981
AlwI	GGATC	1 cut(s)	887
AlwNI	CAGNNNCTG	1 cut(s)	182
Ama87I	CYCGRG	2 cut(s)	1135, 1234
Aor13HI	TCCGGA	1 cut(s)	636
Aor51HI	AGCGCT	1 cut(s)	603
AoxI	GGCC	6 cut(s)	445, 471, 475, 543, 589, 674
ApeKI	GCWGC	1 cut(s)	572
ApoI	RAATTY	4 cut(s)	904, 1015, 1030, 1075
Asp700I	GAANNNNTTC	1 cut(s)	749
AspS9I	GGNCC	2 cut(s)	590, 1300
AsuHPI	GGTGA	2 cut(s)	21, 737
AsuII	TTCGAA	1 cut(s)	1028
AvaI	CYCGRG	2 cut(s)	1135, 1234
AvaII	GGWCC	1 cut(s)	1300
BanI	GGYRCC	2 cut(s)	773, 1218
BbsI	GAAGAC	1 cut(s)	234
Bbv12I	GWGCWC	1 cut(s)	1309
BbvCI	CCTCAGC	1 cut(s)	323
BbvI	GCAGC	1 cut(s)	559
BccI	CCATC	6 cut(s)	31, 60, 395, 506, 952, 1040
BceAI	ACGGC	4 cut(s)	440, 539, 604, 699
BciT130I	CCWGG	2 cut(s)	547, 1223
BclI	TGATCA	1 cut(s)	807
BcoDI	GTCTC	3 cut(s)	97, 930, 981
BfaI	CTAG	5 cut(s)	822, 1035, 1089, 1205, 1319
BfoI	RGCGCY	3 cut(s)	415, 555, 605
BglI	GCCNNNNNGGC	1 cut(s)	470
Bme1390I	CCNGG	2 cut(s)	547, 1223
Bme18I	GGWCC	1 cut(s)	1300
BmeT110I	CYCGRG	2 cut(s)	1135, 1234
BmgBI	CACGTC	1 cut(s)	538
BmgT120I	GGNCC	2 cut(s)	590, 1300
BmiI	GGNNCC	3 cut(s)	775, 1220, 1294
BmrFI	CCNGG	2 cut(s)	547, 1223
BmrI	ACTGGG	2 cut(s)	97, 376
BmsI	GCATC	2 cut(s)	262, 1191
BmuI	ACTGGG	2 cut(s)	97, 376
BpiI	GAAGAC	1 cut(s)	234
BpmI	CTGGAG	1 cut(s)	568
Bpu10I	CCTNAGC	1 cut(s)	323
Bpu14I	TTCGAA	1 cut(s)	1028
BpuEI	CTTGAG	1 cut(s)	590
BsaHI	GRCGYC	1 cut(s)	432
BsaI	GGTCTC	2 cut(s)	97, 981
BsaJI	CCNNGG	3 cut(s)	442, 468, 1296
BsaWI	WCCGGW	1 cut(s)	636
BsaXI	ACNNNNNCTCC	4 cut(s)	422, 452, 479, 509
Bsc4I	CCNNNNNNNGG	3 cut(s)	541, 770, 916
Bse118I	RCCGGY	1 cut(s)	473
Bse1I	ACTGG	2 cut(s)	92, 382
Bse3DI	GCAATG	2 cut(s)	412, 975
BseAI	TCCGGA	1 cut(s)	636
BseBI	CCWGG	2 cut(s)	547, 1223
BseDI	CCNNGG	3 cut(s)	442, 468, 1296
BseGI	GGATG	6 cut(s)	52, 790, 963, 1057, 1206, 1231
BseLI	CCNNNNNNNGG	3 cut(s)	541, 770, 916
BseMI	GCAATG	2 cut(s)	412, 975
BseMII	CTCAG	4 cut(s)	337, 756, 1205, 1314
BseNI	ACTGG	2 cut(s)	92, 382
BsePI	GCGCGC	1 cut(s)	376
BseRI	GAGGAG	5 cut(s)	103, 239, 440, 997, 1036
BseX3I	CGGCCG	1 cut(s)	674
BseXI	GCAGC	1 cut(s)	559
BseYI	CCCAGC	3 cut(s)	175, 339, 1175
Bsh1236I	CGCG	8 cut(s)	133, 376, 378, 397, 628, 633, 673, 701
Bsh1285I	CGRYCG	1 cut(s)	677
BshFI	GGCC	6 cut(s)	447, 473, 477, 545, 591, 676
BshNI	GGYRCC	2 cut(s)	773, 1218
BsiEI	CGRYCG	1 cut(s)	677
BsiHKAI	GWGCWC	1 cut(s)	1309
BsiHKCI	CYCGRG	2 cut(s)	1135, 1234
BsiSI	CCGG	7 cut(s)	474, 522, 579, 637, 653, 677, 782
BslI	CCNNNNNNNGG	3 cut(s)	541, 770, 916
BsmAI	GTCTC	3 cut(s)	97, 930, 981
BsmI	GAATGC	2 cut(s)	712, 1177
BsnI	GGCC	6 cut(s)	447, 473, 477, 545, 591, 676
Bso31I	GGTCTC	2 cut(s)	97, 981
BsoBI	CYCGRG	2 cut(s)	1135, 1234
Bsp119I	TTCGAA	1 cut(s)	1028
Bsp1286I	GDGCHC	1 cut(s)	1309
Bsp13I	TCCGGA	1 cut(s)	636
Bsp143I	GATC	2 cut(s)	807, 879
Bsp19I	CCATGG	1 cut(s)	1296
BspANI	GGCC	6 cut(s)	447, 473, 477, 545, 591, 676
BspCNI	CTCAG	4 cut(s)	336, 757, 1206, 1315
BspEI	TCCGGA	1 cut(s)	636
BspFNI	CGCG	8 cut(s)	133, 376, 378, 397, 628, 633, 673, 701
BspLI	GGNNCC	3 cut(s)	775, 1220, 1294
BspPI	GGATC	1 cut(s)	887
BspQI	GCTCTTC	1 cut(s)	617
BspT104I	TTCGAA	1 cut(s)	1028
BspT107I	GGYRCC	2 cut(s)	773, 1218
BspTNI	GGTCTC	2 cut(s)	97, 981
BsrBI	CCGCTC	1 cut(s)	519
BsrDI	GCAATG	2 cut(s)	412, 975
BsrFI	RCCGGY	1 cut(s)	473
BsrI	ACTGG	2 cut(s)	92, 382
BssAI	RCCGGY	1 cut(s)	473
BssECI	CCNNGG	3 cut(s)	442, 468, 1296
BssHII	GCGCGC	1 cut(s)	376
BssMI	GATC	2 cut(s)	807, 879
BssNAI	GTATAC	1 cut(s)	1125
BssNI	GRCGYC	1 cut(s)	432
BssT1I	CCWWGG	2 cut(s)	468, 1296
Bst1107I	GTATAC	1 cut(s)	1125
Bst2UI	CCWGG	2 cut(s)	547, 1223
Bst4CI	ACNGT	4 cut(s)	886, 1195, 1267, 1304
Bst6I	CTCTTC	2 cut(s)	617, 1036
BstACI	GRCGYC	1 cut(s)	432
BstBI	TTCGAA	1 cut(s)	1028
BstC8I	GCNNGC	7 cut(s)	332, 378, 416, 475, 1309, 1343, 1347
BstDEI	CTNAG	5 cut(s)	323, 765, 1004, 1214, 1323
BstDSI	CCRYGG	1 cut(s)	1296
BstENI	CCTNNNNNAGG	1 cut(s)	768
BstF5I	GGATG	6 cut(s)	52, 790, 963, 1057, 1206, 1231
BstFNI	CGCG	8 cut(s)	133, 376, 378, 397, 628, 633, 673, 701
BstH2I	RGCGCY	3 cut(s)	415, 555, 605
BstKTI	GATC	2 cut(s)	810, 882
BstMAI	GTCTC	3 cut(s)	97, 930, 981
BstMBI	GATC	2 cut(s)	807, 879
BstMCI	CGRYCG	1 cut(s)	677
BstNI	CCWGG	2 cut(s)	547, 1223
BstSCI	CCNGG	2 cut(s)	545, 1221
BstUI	CGCG	8 cut(s)	133, 376, 378, 397, 628, 633, 673, 701
BstV1I	GCAGC	1 cut(s)	559
BstV2I	GAAGAC	1 cut(s)	234
BstZ17I	GTATAC	1 cut(s)	1125
BstZI	CGGCCG	1 cut(s)	674
BsuRI	GGCC	6 cut(s)	447, 473, 477, 545, 591, 676
BtgI	CCRYGG	1 cut(s)	1296
BtrI	CACGTC	1 cut(s)	538
BtsCI	GGATG	6 cut(s)	52, 790, 963, 1057, 1206, 1231
BtsIMutI	CAGTG	4 cut(s)	85, 891, 1151, 1211
Cac8I	GCNNGC	7 cut(s)	332, 378, 416, 475, 1309, 1343, 1347
CaiI	CAGNNNCTG	1 cut(s)	182
Cfr10I	RCCGGY	1 cut(s)	473
Cfr13I	GGNCC	2 cut(s)	590, 1300
CseI	GACGC	2 cut(s)	440, 622
CviAII	CATG	3 cut(s)	511, 1250, 1297
DdeI	CTNAG	5 cut(s)	323, 765, 1004, 1214, 1323
DpnI	GATC	2 cut(s)	809, 881
DpnII	GATC	2 cut(s)	807, 879
DraIII	CACNNNGTG	1 cut(s)	888
EaeI	YGGCCR	2 cut(s)	475, 674
EagI	CGGCCG	1 cut(s)	674
Eam1104I	CTCTTC	2 cut(s)	617, 1036
EarI	CTCTTC	2 cut(s)	617, 1036
EciI	GGCGGA	3 cut(s)	242, 410, 680
EclXI	CGGCCG	1 cut(s)	674
Eco130I	CCWWGG	2 cut(s)	468, 1296
Eco147I	AGGCCT	1 cut(s)	545
Eco31I	GGTCTC	2 cut(s)	97, 981
Eco47I	GGWCC	1 cut(s)	1300
Eco47III	AGCGCT	1 cut(s)	603
Eco52I	CGGCCG	1 cut(s)	674
Eco88I	CYCGRG	2 cut(s)	1135, 1234
EcoNI	CCTNNNNNAGG	1 cut(s)	768
EcoRI	GAATTC	3 cut(s)	904, 1030, 1075
EcoRII	CCWGG	2 cut(s)	545, 1221
EcoT14I	CCWWGG	2 cut(s)	468, 1296
ErhI	CCWWGG	2 cut(s)	468, 1296
FaeI	CATG	3 cut(s)	514, 1253, 1300
FatI	CATG	3 cut(s)	510, 1249, 1296
FauI	CCCGC	4 cut(s)	175, 308, 491, 1282
FbaI	TGATCA	1 cut(s)	807
FblI	GTMKAC	1 cut(s)	1124
FokI	GGATG	6 cut(s)	39, 797, 970, 1064, 1213, 1238
FseI	GGCCGGCC	1 cut(s)	477
FspBI	CTAG	5 cut(s)	822, 1035, 1089, 1205, 1319
GsaI	CCCAGC	3 cut(s)	179, 343, 1179
GsuI	CTGGAG	1 cut(s)	568
HaeII	RGCGCY	3 cut(s)	415, 555, 605
HaeIII	GGCC	6 cut(s)	447, 473, 477, 545, 591, 676
HapII	CCGG	7 cut(s)	474, 522, 579, 637, 653, 677, 782
HgaI	GACGC	2 cut(s)	440, 622
Hin1I	GRCGYC	1 cut(s)	432
Hin1II	CATG	3 cut(s)	514, 1253, 1300
HindIII	AAGCTT	1 cut(s)	236
HinfI	GANTC	5 cut(s)	280, 668, 767, 1000, 1237
HpaII	CCGG	7 cut(s)	474, 522, 579, 637, 653, 677, 782
HphI	GGTGA	2 cut(s)	21, 737
Hpy166II	GTNNAC	2 cut(s)	1094, 1125
Hpy188I	TCNGA	5 cut(s)	598, 935, 1074, 1200, 1356
Hpy188III	TCNNGA	2 cut(s)	637, 742
Hpy8I	GTNNAC	2 cut(s)	1094, 1125
Hpy99I	CGWCG	6 cut(s)	434, 461, 560, 587, 590, 758
HpyAV	CCTTC	6 cut(s)	603, 825, 829, 971, 1153, 1279
HpyCH4III	ACNGT	4 cut(s)	886, 1195, 1267, 1304
HpyCH4IV	ACGT	2 cut(s)	537, 1096
HpyCH4V	TGCA	3 cut(s)	996, 1277, 1349
HpyF3I	CTNAG	5 cut(s)	323, 765, 1004, 1214, 1323
HpySE526I	ACGT	2 cut(s)	537, 1096
Hsp92I	GRCGYC	1 cut(s)	432
Hsp92II	CATG	3 cut(s)	514, 1253, 1300
Kpn2I	TCCGGA	1 cut(s)	636
KroI	GCCGGC	1 cut(s)	473
KroNI	GCCGGC	1 cut(s)	475
Ksp22I	TGATCA	1 cut(s)	807
Kzo9I	GATC	2 cut(s)	807, 879
LguI	GCTCTTC	1 cut(s)	617
LmnI	GCTCC	6 cut(s)	423, 519, 524, 549, 655, 871
Lsp1109I	GCAGC	1 cut(s)	559
LweI	GCATC	2 cut(s)	262, 1191
MaeI	CTAG	5 cut(s)	822, 1035, 1089, 1205, 1319
MaeII	ACGT	2 cut(s)	537, 1096
MaeIII	GTNAC	4 cut(s)	622, 1081, 1183, 1252
MalI	GATC	2 cut(s)	809, 881
MbiI	CCGCTC	1 cut(s)	519
MboI	GATC	2 cut(s)	807, 879
MboII	GAAGA	5 cut(s)	18, 239, 281, 604, 1053
MhlI	GDGCHC	1 cut(s)	1309
MluCI	AATT	6 cut(s)	43, 718, 904, 1015, 1030, 1075
MlyI	GAGTC	3 cut(s)	662, 776, 1246
MmeI	TCCRAC	2 cut(s)	808, 837
MroI	TCCGGA	1 cut(s)	636
MroNI	GCCGGC	1 cut(s)	473
MroXI	GAANNNNTTC	1 cut(s)	749
MseI	TTAA	1 cut(s)	188
MslI	CAYNNNNRTG	1 cut(s)	1224
MspA1I	CMGCKG	2 cut(s)	182, 343
MspI	CCGG	7 cut(s)	474, 522, 579, 637, 653, 677, 782
MspR9I	CCNGG	2 cut(s)	547, 1223
Mva1269I	GAATGC	2 cut(s)	712, 1177
MvaI	CCWGG	2 cut(s)	547, 1223
MvnI	CGCG	8 cut(s)	133, 376, 378, 397, 628, 633, 673, 701
NaeI	GCCGGC	1 cut(s)	475
NcoI	CCATGG	1 cut(s)	1296
NdeII	GATC	2 cut(s)	807, 879
NgoMIV	GCCGGC	1 cut(s)	473
NlaIII	CATG	3 cut(s)	514, 1253, 1300
NlaIV	GGNNCC	3 cut(s)	775, 1220, 1294
NmeAIII	GCCGAG	3 cut(s)	423, 673, 802
NmuCI	GTSAC	2 cut(s)	622, 1252
NspV	TTCGAA	1 cut(s)	1028
PaeR7I	CTCGAG	2 cut(s)	1135, 1234
PauI	GCGCGC	1 cut(s)	376
PceI	AGGCCT	1 cut(s)	545
PciSI	GCTCTTC	1 cut(s)	617
PcsI	WCGNNNNNNNCGW	1 cut(s)	594
PctI	GAATGC	2 cut(s)	712, 1177
PdiI	GCCGGC	1 cut(s)	475
PdmI	GAANNNNTTC	1 cut(s)	749
PfeI	GAWTC	2 cut(s)	280, 1000
PleI	GAGTC	3 cut(s)	662, 775, 1245
PpsI	GAGTC	3 cut(s)	662, 775, 1245
PsiI	TTATAA	1 cut(s)	798
Psp6I	CCWGG	2 cut(s)	545, 1221
PspFI	CCCAGC	3 cut(s)	175, 339, 1175
PspGI	CCWGG	2 cut(s)	545, 1221
PspN4I	GGNNCC	3 cut(s)	775, 1220, 1294
PspPI	GGNCC	2 cut(s)	590, 1300
PspXI	VCTCGAGB	2 cut(s)	1135, 1234
PstNI	CAGNNNCTG	1 cut(s)	182
PteI	GCGCGC	1 cut(s)	376
PvuII	CAGCTG	1 cut(s)	343
RigI	GGCCGGCC	1 cut(s)	477
RseI	CAYNNNNRTG	1 cut(s)	1224
SapI	GCTCTTC	1 cut(s)	617
SaqAI	TTAA	1 cut(s)	188
Sau3AI	GATC	2 cut(s)	807, 879
Sau96I	GGNCC	2 cut(s)	590, 1300
SchI	GAGTC	3 cut(s)	662, 776, 1246
ScrFI	CCNGG	2 cut(s)	547, 1223
SduI	GDGCHC	1 cut(s)	1309
SfaNI	GCATC	2 cut(s)	262, 1191
Sfr274I	CTCGAG	2 cut(s)	1135, 1234
SfuI	TTCGAA	1 cut(s)	1028
SinI	GGWCC	1 cut(s)	1300
SlaI	CTCGAG	2 cut(s)	1135, 1234
SmiMI	CAYNNNNRTG	1 cut(s)	1224
SmlI	CTYRAG	3 cut(s)	605, 1135, 1234
SmoI	CTYRAG	3 cut(s)	605, 1135, 1234
Sse9I	AATT	6 cut(s)	43, 718, 904, 1015, 1030, 1075
SseBI	AGGCCT	1 cut(s)	545
SspMI	CTAG	5 cut(s)	822, 1035, 1089, 1205, 1319
StuI	AGGCCT	1 cut(s)	545
StyD4I	CCNGG	2 cut(s)	545, 1221
StyI	CCWWGG	2 cut(s)	468, 1296
TaaI	ACNGT	4 cut(s)	886, 1195, 1267, 1304
TaiI	ACGT	2 cut(s)	540, 1099
TaqI	TCGA	5 cut(s)	429, 753, 1028, 1136, 1235
TasI	AATT	6 cut(s)	43, 718, 904, 1015, 1030, 1075
TfiI	GAWTC	2 cut(s)	280, 1000
Tru1I	TTAA	1 cut(s)	188
Tru9I	TTAA	1 cut(s)	188
TscAI	CASTG	4 cut(s)	92, 891, 1158, 1218
TseFI	GTSAC	2 cut(s)	622, 1252
TseI	GCWGC	1 cut(s)	572
Tsp45I	GTSAC	2 cut(s)	622, 1252
TspDTI	ATGAA	4 cut(s)	17, 240, 1172, 1184
TspGWI	ACGGA	1 cut(s)	610
TspRI	CASTG	4 cut(s)	92, 891, 1158, 1218
VpaK11BI	GGWCC	1 cut(s)	1300
XagI	CCTNNNNNAGG	1 cut(s)	768
XapI	RAATTY	4 cut(s)	904, 1015, 1030, 1075
XhoI	CTCGAG	2 cut(s)	1135, 1234
XmiI	GTMKAC	1 cut(s)	1124
XmnI	GAANNNNTTC	1 cut(s)	749
XspI	CTAG	5 cut(s)	822, 1035, 1089, 1205, 1319

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.