Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0017189

Physical Location & Seq

Genomic Coordinates Reverse (-)

24006111 .. 24008530

Gene Structure 2420 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G241600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2223 bp

ATGAACCTCAAACCACCATCTTCTTCACCACTAACCTTTAACTCCAACAACCCATTTCCTGCAACCCACTCTTCTCTCACCCTCCATTGGGTTTCTTCCCCACACTATCCCTCCTCCATCTCCAGCCCCACGCGCCCATTTCGCCTACTCGCCACCGCCAACCCCCCCACCAACCCAACTTCAGACCTCTCTCTCGCCGCCACCGCCGCACTACCTAATGAAGACCAAAAGCTTCTGACGCTCCTCCGCCAGAGAAAAACAGAGGAGGCTTGGATTGCCTACACCCAATCCACCCATTTGCCCAATCCCACTTGCCTCAGCCGCTTGCTCTCTCAACTCTCCTACCAGAACTCTCATTCCGGCCTCACTCGCGCCCAGTCCATCATCACGCGCCTCCGCAATGAGCGCCAGCTCCGCCACCTCGACGCCAACTCCCTTGGCCTCCTCGCCGTCGCTGCCGCCAAGGCTGGCCAGACCCGCTATGCTGCATCCATTGTCAAGTCCATGCTCCGCTCCGGCTTCCTCCCTCACGTCAAGGCCTGGAGTGCCGTCGTGAGCCGGCTCGCCGCCACTGGGGATGACGGGCCTGCCGACGCTCTCAAGCTCTTCCATTCAGTCACCCGCCGTGTCCGGCGGTTCTCGGAGCCGGAGTTGGTCGCTGACTCGCGGCCGGACACGGCAGCCTTCAACGCTGCGCTGAATGCCTGTGCCAATTTGGGGGATACTAAGAGATTCTTGAAGCTGTTCGATGAAATGCCTGAGTATGGTGCTGAGCCTGATGTGCTCACTTACAATGTTATGATCAAGCTGTGCGCCAGAGTTGGAAGGAAGGATTTGCTTGTTTTTGTGTTGGAGAGGATTCTTGACAAGGGCATTACCTTGTGTTTGACAACGTTGAATTCGCTGGTGGCAGCTTATGTTGGTTTCGGTGATTTGGAAACCGCAGAGCAAATGGTTCAAGCAATGAGGGAAGGGAGGAGAGACCTGTGCAAGATTTTAAGGGATTTGAATTCGAATAATTCAAAGTCGAGTCTAAGTGATGGGGATGTGTTTGAGAAGTTGCTTCCTAATTCGGTTAGAGCAAATGATTGTGAGCCGCCATTGTTGCCTAAAGCATACACTTGTAACTCTAGGATTTACACTACTTTAATGAAGGGTTATATGAACGTTGGCCGTGTTACTGACACCGTTCGGATGCTAGAGGCACTCAGGCACCAGGATGATAGCTCAAGCCATCCTGACCATGTAACCTATACGACTGTTATTTCTGCATTTGTGAAGGCTGGCTCAATGGACCGTGCTCGGCGAGTGCTTGCAGAGATGACAAGAGTTGGTGTGCCTGCAAATCGGATCACGTATAATATTCTTCTCAAAGGTTATTGCCAGCAGCTGCAGATAGACCAGGCCAAGGAGCTCCTTAGGGAGATGGCTGATGATGCTGGGATTGAGCCTGATGTGGTTTCGTATAATATATTGATTGATGGATGCATACTGGTTGATGACAGTGCTGGGGCTCTTGGCTTTTTTAATGAGATGCGAACAAGAGGACTTGCTCCCACCAAGATCAGTTACACCACTTTGATGAAAGCTTTTGCCTTGTCGGGTCAGCCGAAGCTGGCTAACAAGGTGTTTGATGAGATGCTTAACGATCCTCGGGTAAAGGCTGATTTGGTTGCTTGGAATATGTTGGTTGAAGCGTATTGCAGAATGGGGTTAGTCGAAGAAGCCAAGAAAATCATTCAGAGAATCAAAGACAATGGGTTTCACCCTGATGTGGCCACTTATGGCAGCCTTGCCAACGGAATTGCATTGGCTAGAAAACCAGGGGAGGCACTCTTGCTTTGGAATGAAGTGAAGGAGAGATGTAGGGTTAAAAAGGAAGGGGAAACTTCTGATCCTTCCGATCCGCCAACACTGAAACCCGATGAAGGGCTATTAGATACTTTGGCTGATATATGTGTCAGGGCTGCTTTCTTTAAGAAGGCTTTGGAGATTGTGGCTTGTATGGAAGAGAATGGGATCCCTCCAAATAAGACAAAGTTCACTAAAATTTATGTGGAGATGCATTCTAGGATGTTTACTAGTAAGCATGCCTCACAAGCCAGGCAGGACAGGAGGATTGAGAGGAAGAGAGCAGCTGAGGCTTTCAAATTTTGGCTGGGTTTGCCCAATTCTTACTATGGGAGTGAATGGAGGTTAGAGCCTATAGATGGAGATGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

741

Amino Acids

82.26

Weight (kDa)

8.82

Isoelectric Point (pI)

38.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017189)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09650
fragaria_vesca	FvH4_6g15290
prunus_persica	Prupe.6G241600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0468701
rosa_laevigata	RLG00000024415
rosa_multiflora	Rmu_sc0011538.1_g000002 Rmu_sc0028512.1_g000001 Rmu_sc0033138.1_g000003
rosa_rugosa	Rorug03G0096200
rosa_samantha	Rh3AG145300 Rh3BG168000 Rh3DG166600
rosa_wichuraiana	Rw3G013690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1212
AccBSI	CCGCTC	1 cut(s)	513
AccII	CGCG	4 cut(s)	133, 372, 391, 667
AclI	AACGTT	2 cut(s)	893, 1167
AclWI	GGATC	6 cut(s)	1358, 1643, 1889, 1898, 2014, 2027
AcoI	YGGCCR	4 cut(s)	469, 668, 1171, 1776
AcsI	RAATTY	4 cut(s)	898, 1009, 2049, 2150
AcuI	CTGAAG	1 cut(s)	165
AcyI	GRCGYC	1 cut(s)	426
AgsI	TTSAA	8 cut(s)	688, 739, 898, 959, 1009, 1023, 1694, 2149
AhlI	ACTAGT	1 cut(s)	2081
AjiI	CACGTC	1 cut(s)	532
AjnI	CCWGG	5 cut(s)	539, 1215, 1401, 1822, 2102
AloI	GAACNNNNNNTCC	2 cut(s)	341, 373
Alw21I	GWGCWC	3 cut(s)	786, 1303, 1416
Alw26I	GTCTC	1 cut(s)	975
AlwI	GGATC	6 cut(s)	1358, 1643, 1889, 1898, 2014, 2027
AlwNI	CAGNNNCTG	1 cut(s)	1390
Ama87I	CYCGRG	1 cut(s)	1653
AoxI	GGCC	9 cut(s)	361, 439, 469, 537, 584, 668, 1171, 1404, 1776
ApoI	RAATTY	4 cut(s)	898, 1009, 2049, 2150
Asp700I	GAANNNNTTC	1 cut(s)	743
AspLEI	GCGC	6 cut(s)	135, 374, 393, 408, 697, 815
AspS9I	GGNCC	2 cut(s)	584, 1294
AsuHPI	GGTGA	5 cut(s)	18, 70, 610, 941, 1757
AsuII	TTCGAA	1 cut(s)	1013
AvaI	CYCGRG	1 cut(s)	1653
AvaII	GGWCC	1 cut(s)	1294
AxyI	CCTNAGG	1 cut(s)	1418
BalI	TGGCCA	2 cut(s)	471, 1778
BamHI	GGATCC	1 cut(s)	2019
BanI	GGYRCC	1 cut(s)	1212
BanII	GRGCYC	2 cut(s)	1416, 1516
BbsI	GAAGAC	1 cut(s)	228
Bbv12I	GWGCWC	3 cut(s)	786, 1303, 1416
BbvCI	CCTCAGC	2 cut(s)	317, 2139
BccI	CCATC	8 cut(s)	25, 125, 389, 1034, 1242, 1420, 1475, 2204
BceAI	ACGGC	5 cut(s)	434, 533, 609, 693, 1158
BciT130I	CCWGG	5 cut(s)	541, 1217, 1403, 1824, 2104
BciVI	GTATCC	1 cut(s)	715
BclI	TGATCA	1 cut(s)	801
BcoDI	GTCTC	1 cut(s)	975
BcuI	ACTAGT	1 cut(s)	2081
BfaI	CTAG	5 cut(s)	1131, 1199, 1815, 2070, 2082
BfmI	CTRYAG	2 cut(s)	1391, 2205
BfoI	RGCGCY	1 cut(s)	409
BfuI	GTATCC	1 cut(s)	715
BglI	GCCNNNNNGGC	1 cut(s)	464
BlpI	GCTNAGC	1 cut(s)	771
Bme1390I	CCNGG	5 cut(s)	541, 1217, 1403, 1824, 2104
Bme18I	GGWCC	1 cut(s)	1294
BmeT110I	CYCGRG	1 cut(s)	1653
BmgBI	CACGTC	1 cut(s)	532
BmgT120I	GGNCC	2 cut(s)	584, 1294
BmiI	GGNNCC	3 cut(s)	645, 1214, 2021
BmrFI	CCNGG	5 cut(s)	541, 1217, 1403, 1824, 2104
BmrI	ACTGGG	2 cut(s)	370, 582
BmsI	GCATC	7 cut(s)	497, 1185, 1426, 1475, 1524, 1629, 2052
BmuI	ACTGGG	2 cut(s)	370, 582
BpiI	GAAGAC	1 cut(s)	228
BpmI	CTGGAG	2 cut(s)	106, 562
Bpu10I	CCTNAGC	2 cut(s)	317, 2139
Bpu1102I	GCTNAGC	1 cut(s)	771
Bpu14I	TTCGAA	1 cut(s)	1013
BpuEI	CTTGAG	2 cut(s)	584, 1213
BsaAI	YACGTR	1 cut(s)	1356
BsaHI	GRCGYC	1 cut(s)	426
BsaI	GGTCTC	1 cut(s)	975
BsaJI	CCNNGG	5 cut(s)	436, 462, 1407, 1652, 1823
BsaXI	ACNNNNNCTCC	6 cut(s)	95, 125, 416, 446, 635, 665
Bse118I	RCCGGY	1 cut(s)	558
Bse1I	ACTGG	3 cut(s)	376, 577, 1497
Bse21I	CCTNAGG	1 cut(s)	1418
Bse3DI	GCAATG	2 cut(s)	406, 969
BseBI	CCWGG	5 cut(s)	541, 1217, 1403, 1824, 2104
BseDI	CCNNGG	5 cut(s)	436, 462, 1407, 1652, 1823
BseGI	GGATG	8 cut(s)	488, 583, 1051, 1200, 1225, 1234, 1490, 2079
BseMI	GCAATG	2 cut(s)	406, 969
BseMII	CTCAG	5 cut(s)	331, 750, 762, 1222, 2130
BseNI	ACTGG	3 cut(s)	376, 577, 1497
BseRI	GAGGAG	5 cut(s)	103, 233, 278, 434, 991
BseX3I	CGGCCG	1 cut(s)	668
BseYI	CCCAGC	3 cut(s)	1439, 1508, 2158
Bsh1236I	CGCG	4 cut(s)	133, 372, 391, 667
Bsh1285I	CGRYCG	1 cut(s)	671
BshFI	GGCC	9 cut(s)	363, 441, 471, 539, 586, 670, 1173, 1406, 1778
BshNI	GGYRCC	1 cut(s)	1212
BsiEI	CGRYCG	1 cut(s)	671
BsiHKAI	GWGCWC	3 cut(s)	786, 1303, 1416
BsiHKCI	CYCGRG	1 cut(s)	1653
BsiSI	CCGG	6 cut(s)	360, 516, 559, 631, 647, 671
BsmAI	GTCTC	1 cut(s)	975
BsmI	GAATGC	2 cut(s)	706, 2065
BsnI	GGCC	9 cut(s)	363, 441, 471, 539, 586, 670, 1173, 1406, 1778
Bso31I	GGTCTC	1 cut(s)	975
BsoBI	CYCGRG	1 cut(s)	1653
Bsp119I	TTCGAA	1 cut(s)	1013
Bsp1286I	GDGCHC	4 cut(s)	786, 1303, 1416, 1516
Bsp143I	GATC	7 cut(s)	801, 1350, 1563, 1648, 1894, 1903, 2019
Bsp1720I	GCTNAGC	1 cut(s)	771
BspANI	GGCC	9 cut(s)	363, 441, 471, 539, 586, 670, 1173, 1406, 1778
BspCNI	CTCAG	5 cut(s)	330, 751, 763, 1221, 2131
BspFNI	CGCG	4 cut(s)	133, 372, 391, 667
BspLI	GGNNCC	3 cut(s)	645, 1214, 2021
BspMAI	CTGCAG	1 cut(s)	1395
BspPI	GGATC	6 cut(s)	1358, 1643, 1889, 1898, 2014, 2027
BspQI	GCTCTTC	1 cut(s)	611
BspT104I	TTCGAA	1 cut(s)	1013
BspT107I	GGYRCC	1 cut(s)	1212
BspTNI	GGTCTC	1 cut(s)	975
BsrBI	CCGCTC	1 cut(s)	513
BsrDI	GCAATG	2 cut(s)	406, 969
BsrFI	RCCGGY	1 cut(s)	558
BsrI	ACTGG	3 cut(s)	376, 577, 1497
BssAI	RCCGGY	1 cut(s)	558
BssECI	CCNNGG	5 cut(s)	436, 462, 1407, 1652, 1823
BssMI	GATC	7 cut(s)	801, 1350, 1563, 1648, 1894, 1903, 2019
BssNI	GRCGYC	1 cut(s)	426
BssT1I	CCWWGG	3 cut(s)	436, 462, 1407
Bst2UI	CCWGG	5 cut(s)	541, 1217, 1403, 1824, 2104
Bst4CI	ACNGT	4 cut(s)	1189, 1261, 1298, 1505
Bst6I	CTCTTC	4 cut(s)	76, 611, 2004, 2123
BstACI	GRCGYC	1 cut(s)	426
BstBAI	YACGTR	1 cut(s)	1356
BstBI	TTCGAA	1 cut(s)	1013
BstDEI	CTNAG	8 cut(s)	317, 726, 759, 771, 1034, 1208, 1418, 2139
BstF5I	GGATG	8 cut(s)	488, 583, 1051, 1200, 1225, 1234, 1490, 2079
BstFNI	CGCG	4 cut(s)	133, 372, 391, 667
BstH2I	RGCGCY	1 cut(s)	409
BstHHI	GCGC	6 cut(s)	135, 374, 393, 408, 697, 815
BstKTI	GATC	7 cut(s)	804, 1353, 1566, 1651, 1897, 1906, 2022
BstMAI	GTCTC	1 cut(s)	975
BstMBI	GATC	7 cut(s)	801, 1350, 1563, 1648, 1894, 1903, 2019
BstMCI	CGRYCG	1 cut(s)	671
BstNI	CCWGG	5 cut(s)	541, 1217, 1403, 1824, 2104
BstNSI	RCATGY	1 cut(s)	2093
BstSCI	CCNGG	5 cut(s)	539, 1215, 1401, 1822, 2102
BstSFI	CTRYAG	2 cut(s)	1391, 2205
BstUI	CGCG	4 cut(s)	133, 372, 391, 667
BstV2I	GAAGAC	1 cut(s)	228
BstX2I	RGATCY	1 cut(s)	2019
BstYI	RGATCY	1 cut(s)	2019
BstZI	CGGCCG	1 cut(s)	668
Bsu36I	CCTNAGG	1 cut(s)	1418
BsuI	GTATCC	1 cut(s)	715
BsuRI	GGCC	9 cut(s)	363, 441, 471, 539, 586, 670, 1173, 1406, 1778
BtrI	CACGTC	1 cut(s)	532
BtsCI	GGATG	8 cut(s)	488, 583, 1051, 1200, 1225, 1234, 1490, 2079
BtsIMutI	CAGTG	3 cut(s)	570, 1510, 1913
CaiI	CAGNNNCTG	1 cut(s)	1390
CfoI	GCGC	6 cut(s)	135, 374, 393, 408, 697, 815
Cfr10I	RCCGGY	1 cut(s)	558
Cfr13I	GGNCC	2 cut(s)	584, 1294
CseI	GACGC	3 cut(s)	247, 434, 602
CviAII	CATG	3 cut(s)	505, 1244, 2090
DdeI	CTNAG	8 cut(s)	317, 726, 759, 771, 1034, 1208, 1418, 2139
DpnI	GATC	7 cut(s)	803, 1352, 1565, 1650, 1896, 1905, 2021
DpnII	GATC	7 cut(s)	801, 1350, 1563, 1648, 1894, 1903, 2019
EaeI	YGGCCR	4 cut(s)	469, 668, 1171, 1776
EagI	CGGCCG	1 cut(s)	668
Eam1104I	CTCTTC	4 cut(s)	76, 611, 2004, 2123
EarI	CTCTTC	4 cut(s)	76, 611, 2004, 2123
EciI	GGCGGA	3 cut(s)	236, 404, 1896
Ecl136II	GAGCTC	1 cut(s)	1414
EclXI	CGGCCG	1 cut(s)	668
Eco130I	CCWWGG	3 cut(s)	436, 462, 1407
Eco147I	AGGCCT	1 cut(s)	539
Eco24I	GRGCYC	2 cut(s)	1416, 1516
Eco31I	GGTCTC	1 cut(s)	975
Eco47I	GGWCC	1 cut(s)	1294
Eco52I	CGGCCG	1 cut(s)	668
Eco53kI	GAGCTC	1 cut(s)	1414
Eco57I	CTGAAG	1 cut(s)	165
Eco81I	CCTNAGG	1 cut(s)	1418
Eco88I	CYCGRG	1 cut(s)	1653
EcoICRI	GAGCTC	1 cut(s)	1414
EcoRI	GAATTC	2 cut(s)	898, 1009
EcoRII	CCWGG	5 cut(s)	539, 1215, 1401, 1822, 2102
EcoT14I	CCWWGG	3 cut(s)	436, 462, 1407
EcoT22I	ATGCAT	2 cut(s)	1490, 2067
EcoT38I	GRGCYC	2 cut(s)	1416, 1516
ErhI	CCWWGG	3 cut(s)	436, 462, 1407
FaeI	CATG	3 cut(s)	508, 1247, 2093
FalI	AAGNNNNNCTT	2 cut(s)	719, 751
FatI	CATG	3 cut(s)	504, 1243, 2089
FauI	CCCGC	2 cut(s)	485, 629
FbaI	TGATCA	1 cut(s)	801
FokI	GGATG	8 cut(s)	475, 590, 1058, 1207, 1221, 1232, 1497, 2086
FriOI	GRGCYC	2 cut(s)	1416, 1516
FspBI	CTAG	5 cut(s)	1131, 1199, 1815, 2070, 2082
GlaI	GCGC	6 cut(s)	134, 373, 392, 407, 696, 814
GsaI	CCCAGC	3 cut(s)	1443, 1512, 2162
GsuI	CTGGAG	2 cut(s)	106, 562
HaeII	RGCGCY	1 cut(s)	409
HaeIII	GGCC	9 cut(s)	363, 441, 471, 539, 586, 670, 1173, 1406, 1778
HapII	CCGG	6 cut(s)	360, 516, 559, 631, 647, 671
HgaI	GACGC	3 cut(s)	247, 434, 602
HhaI	GCGC	6 cut(s)	135, 374, 393, 408, 697, 815
Hin1I	GRCGYC	1 cut(s)	426
Hin1II	CATG	3 cut(s)	508, 1247, 2093
Hin6I	GCGC	6 cut(s)	133, 372, 391, 406, 695, 813
HinP1I	GCGC	6 cut(s)	133, 372, 391, 406, 695, 813
HindIII	AAGCTT	2 cut(s)	230, 1587
HinfI	GANTC	5 cut(s)	662, 732, 859, 1030, 1746
HpaII	CCGG	6 cut(s)	360, 516, 559, 631, 647, 671
HphI	GGTGA	5 cut(s)	18, 70, 610, 941, 1757
Hpy166II	GTNNAC	2 cut(s)	2043, 2079
Hpy188I	TCNGA	8 cut(s)	184, 237, 643, 1194, 1350, 1743, 1894, 1903
Hpy188III	TCNNGA	4 cut(s)	553, 736, 863, 1238
Hpy8I	GTNNAC	2 cut(s)	2043, 2079
Hpy99I	CGWCG	4 cut(s)	428, 455, 554, 596
HpyCH4III	ACNGT	4 cut(s)	1189, 1261, 1298, 1505
HpyCH4IV	ACGT	4 cut(s)	531, 893, 1167, 1355
HpyF3I	CTNAG	8 cut(s)	317, 726, 759, 771, 1034, 1208, 1418, 2139
HpySE526I	ACGT	4 cut(s)	531, 893, 1167, 1355
Hsp92I	GRCGYC	1 cut(s)	426
Hsp92II	CATG	3 cut(s)	508, 1247, 2093
HspAI	GCGC	6 cut(s)	133, 372, 391, 406, 695, 813
KroI	GCCGGC	1 cut(s)	558
KroNI	GCCGGC	1 cut(s)	560
Ksp22I	TGATCA	1 cut(s)	801
Kzo9I	GATC	7 cut(s)	801, 1350, 1563, 1648, 1894, 1903, 2019
LguI	GCTCTTC	1 cut(s)	611
LmnI	GCTCC	8 cut(s)	246, 417, 513, 518, 643, 1411, 1419, 1558
LweI	GCATC	7 cut(s)	497, 1185, 1426, 1475, 1524, 1629, 2052
MaeI	CTAG	5 cut(s)	1131, 1199, 1815, 2070, 2082
MaeII	ACGT	4 cut(s)	531, 893, 1167, 1355
MaeIII	GTNAC	5 cut(s)	616, 1124, 1177, 1246, 1568
MalI	GATC	7 cut(s)	803, 1352, 1565, 1650, 1896, 1905, 2021
MbiI	CCGCTC	1 cut(s)	513
MboI	GATC	7 cut(s)	801, 1350, 1563, 1648, 1894, 1903, 2019
MflI	RGATCY	1 cut(s)	2019
MhlI	GDGCHC	4 cut(s)	786, 1303, 1416, 1516
MlsI	TGGCCA	2 cut(s)	471, 1778
MluCI	AATT	9 cut(s)	712, 898, 1009, 1018, 1069, 1803, 2049, 2150, 2170
MluNI	TGGCCA	2 cut(s)	471, 1778
MlyI	GAGTC	2 cut(s)	656, 1039
MmeI	TCCRAC	3 cut(s)	69, 802, 831
Mox20I	TGGCCA	2 cut(s)	471, 1778
Mph1103I	ATGCAT	2 cut(s)	1490, 2067
MroNI	GCCGGC	1 cut(s)	558
MroXI	GAANNNNTTC	1 cut(s)	743
MscI	TGGCCA	2 cut(s)	471, 1778
MseI	TTAA	7 cut(s)	39, 998, 1148, 1527, 1644, 1872, 1977
MslI	CAYNNNNRTG	3 cut(s)	1218, 1580, 1770
Msp20I	TGGCCA	2 cut(s)	471, 1778
MspA1I	CMGCKG	2 cut(s)	1390, 2138
MspI	CCGG	6 cut(s)	360, 516, 559, 631, 647, 671
MspR9I	CCNGG	5 cut(s)	541, 1217, 1403, 1824, 2104
Mva1269I	GAATGC	2 cut(s)	706, 2065
MvaI	CCWGG	5 cut(s)	541, 1217, 1403, 1824, 2104
MvnI	CGCG	4 cut(s)	133, 372, 391, 667
NaeI	GCCGGC	1 cut(s)	560
NdeII	GATC	7 cut(s)	801, 1350, 1563, 1648, 1894, 1903, 2019
NgoMIV	GCCGGC	1 cut(s)	558
NlaIII	CATG	3 cut(s)	508, 1247, 2093
NlaIV	GGNNCC	3 cut(s)	645, 1214, 2021
NmeAIII	GCCGAG	1 cut(s)	1282
NmuCI	GTSAC	1 cut(s)	616
NsiI	ATGCAT	2 cut(s)	1490, 2067
NspI	RCATGY	1 cut(s)	2093
NspV	TTCGAA	1 cut(s)	1013
PaeI	GCATGC	1 cut(s)	2093
PceI	AGGCCT	1 cut(s)	539
PciSI	GCTCTTC	1 cut(s)	611
PcsI	WCGNNNNNNNCGW	2 cut(s)	588, 1607
PctI	GAATGC	2 cut(s)	706, 2065
PdiI	GCCGGC	1 cut(s)	560
PdmI	GAANNNNTTC	1 cut(s)	743
PfeI	GAWTC	3 cut(s)	732, 859, 1746
PleI	GAGTC	2 cut(s)	656, 1038
PpsI	GAGTC	2 cut(s)	656, 1038
Ppu21I	YACGTR	1 cut(s)	1356
Psp124BI	GAGCTC	1 cut(s)	1416
Psp1406I	AACGTT	2 cut(s)	893, 1167
Psp6I	CCWGG	5 cut(s)	539, 1215, 1401, 1822, 2102
PspFI	CCCAGC	3 cut(s)	1439, 1508, 2158
PspGI	CCWGG	5 cut(s)	539, 1215, 1401, 1822, 2102
PspN4I	GGNNCC	3 cut(s)	645, 1214, 2021
PspPI	GGNCC	2 cut(s)	584, 1294
PstI	CTGCAG	1 cut(s)	1395
PstNI	CAGNNNCTG	1 cut(s)	1390
PsuI	RGATCY	1 cut(s)	2019
PvuII	CAGCTG	2 cut(s)	1390, 2138
RseI	CAYNNNNRTG	3 cut(s)	1218, 1580, 1770
SacI	GAGCTC	1 cut(s)	1416
SapI	GCTCTTC	1 cut(s)	611
SaqAI	TTAA	7 cut(s)	39, 998, 1148, 1527, 1644, 1872, 1977
Sau3AI	GATC	7 cut(s)	801, 1350, 1563, 1648, 1894, 1903, 2019
Sau96I	GGNCC	2 cut(s)	584, 1294
SchI	GAGTC	2 cut(s)	656, 1039
ScrFI	CCNGG	5 cut(s)	541, 1217, 1403, 1824, 2104
SduI	GDGCHC	4 cut(s)	786, 1303, 1416, 1516
SfaNI	GCATC	7 cut(s)	497, 1185, 1426, 1475, 1524, 1629, 2052
SfcI	CTRYAG	2 cut(s)	1391, 2205
SfuI	TTCGAA	1 cut(s)	1013
SinI	GGWCC	1 cut(s)	1294
SmiMI	CAYNNNNRTG	3 cut(s)	1218, 1580, 1770
SmlI	CTYRAG	2 cut(s)	599, 1228
SmoI	CTYRAG	2 cut(s)	599, 1228
SpeI	ACTAGT	1 cut(s)	2081
SphI	GCATGC	1 cut(s)	2093
Sse9I	AATT	9 cut(s)	712, 898, 1009, 1018, 1069, 1803, 2049, 2150, 2170
SseBI	AGGCCT	1 cut(s)	539
SspI	AATATT	1 cut(s)	1363
SspMI	CTAG	5 cut(s)	1131, 1199, 1815, 2070, 2082
SstI	GAGCTC	1 cut(s)	1416
StuI	AGGCCT	1 cut(s)	539
StyD4I	CCNGG	5 cut(s)	539, 1215, 1401, 1822, 2102
StyI	CCWWGG	3 cut(s)	436, 462, 1407
TaaI	ACNGT	4 cut(s)	1189, 1261, 1298, 1505
TaiI	ACGT	4 cut(s)	534, 896, 1170, 1358
TaqI	TCGA	5 cut(s)	423, 747, 1013, 1028, 1719
TasI	AATT	9 cut(s)	712, 898, 1009, 1018, 1069, 1803, 2049, 2150, 2170
TauI	GCSGC	7 cut(s)	200, 209, 324, 461, 569, 670, 1099
TfiI	GAWTC	3 cut(s)	732, 859, 1746
Tru1I	TTAA	7 cut(s)	39, 998, 1148, 1527, 1644, 1872, 1977
Tru9I	TTAA	7 cut(s)	39, 998, 1148, 1527, 1644, 1872, 1977
TscAI	CASTG	3 cut(s)	577, 1510, 1920
TseFI	GTSAC	1 cut(s)	616
Tsp45I	GTSAC	1 cut(s)	616
TspDTI	ATGAA	8 cut(s)	17, 234, 765, 1166, 1178, 1598, 1863, 1941
TspGWI	ACGGA	1 cut(s)	1815
TspRI	CASTG	3 cut(s)	577, 1510, 1920
VpaK11BI	GGWCC	1 cut(s)	1294
XapI	RAATTY	4 cut(s)	898, 1009, 2049, 2150
XceI	RCATGY	1 cut(s)	2093
XmnI	GAANNNNTTC	1 cut(s)	743
XspI	CTAG	5 cut(s)	1131, 1199, 1815, 2070, 2082
Zsp2I	ATGCAT	2 cut(s)	1490, 2067

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.