FvH4_6g19352

GMC oxidoreductase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
12890644 .. 12897333
6690 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g19352.t1

Sequence Viewer

Length: 3504 bp
ATGGAGGAGCAAGCTGAGGTAGATGAAAGTTTTGGACATGAAAGTTATGATGCAGTTGTTGTGGGGTCTGGTTATGGCGGTTCTGTTGCTGCTTGCCGACTGGCTATGGCAGGCGTAAGGGTGTGTCTACTTGAAAAAGGCCGTAAATGGGAAGCTCAGGACTTCCCAACTGACACCTTCAAAACGTTATCGGCTGTGAGGCTGGAGAACCAGAACCTAGGTGTCAGCTATGGACCAAAAGATGCTTTGTTTCAGATGTACGAGCAAAATGATTCTCTAGCAGCAGTGGCTTGTGGGCTTGGTGGAGGTTCACTAGTGAATGCAGGAGTTATGATGCCAGCACCAGTTCGTGCTAGACGACATCCAAAATGGCCAAAGGAATGGGAAAGGAATTGGGGTAGTTGTGAAGCTTCTGCAGCAGATATGCTGAGAATACAAAGCATTCCTGTCAAGTTTCCTTCTGCAAAAATATTGGAAGAAGCTGCTGATGGAGAAACTCTTGACACTTCAATAAAGCTTAGTATAAATTTTGACATTGAAGAACCAACAGCAAATGGAACGAAGCGTCCACAAATGGGTAGCTGCTTAGCCTGTGGAAACTGTCTTTCTGGATGTTCTTATAACGCCAAAAGTTCCACTGACAAAAATTATCTAGTCTCAGCAATCCAGGCTGGATGTATTGTCAAAACAGAATGCCAAGTGCAGTATGTGGTTAGAAACATGCATGATTATTTCCAACATAAAGGAAAAAGTGGAAGGAGATGGCTCGTTTACTTGAATGAGATTGACTACATAACCTCTGATTTTGTGATCCTATCAGCGGGAGTTTTTGGCACAACTGAGATACTCTTCCAGTCACAAATGAGAGGACTGAAACTTTCAGAAGCACTTGGATCTGGATTCAGCTGTAATGGGAACACTGTGGCTTATCTAGCTGGAACACCAGCACCAGTAAATGGTTTTGGATTAGACAGAAAGCAGGTGTTCACGACTCCTTTTGAAGAAAGGCCAGGGCCATCGATTTCATCATCTTACACTTCTTCACTCGGTTTTACGATTCAGAGTGCTGTACTTCCAATAGCTTATCCATATCTGCTGTTTAAAGGAATCGTAACATACGGATGGCCTACTGGTTACTGGTTCCTCCATGGAATTATAGACAAGATAGGACACATTATAGGTTCCAAAGCAAGCCAAGCAATGATTCTTATTGCAGTGGGACATGATGAAAGTGATGGTAAGATCATGTTAGAAAAGGGCACCAACAAAATCTGCTTTACTCCACCTCAGGATCCTCTACTCCCGCGAAAGATTAAAGCTTTTCAGAAGCTCACTAAGAAACTAGGAGGGCTTCTATTCATGTCAAAATACCGGAGCACAGCAGTTCATCTTTTAGGTGGGTGTAATGTGTCATCAGATCCTTCAGGTGGTGTCTGCAATCCCAATGGACAGGTTTTTGAACCAGAGTCATCCACAGCTGTGCACCCTGGCCTCTACGTGTGTGATGCTTCTTTGATCCCATGTTCTGTTGGGATAAATCCATCTCTTACCATCACAACTGTAGCTGAGCACATAAGCAAGAACCTTGTGCAGGAAGCTCTCAAGTACAAGAGCAGCAATGGTGTTGAATCTGTTGTCAAAATTGCTAACCGAGGTCAAGAGTCCTTCAACGAGAAGAATTTTATTAACCGTCAAAGCTCAACGGTCATGGTTAAAGAAACCATGCGAGGTTATGTTGGGGGTATGCCATGCACTGCTTATCTAAAAATGAGGATGAATTCTCAGGACCAGTCTTGCTCTGATGTAAAGTTGGATACCGCAAAATCCCATCCTCTTCTAAGAGGTAAAGTTGGAGGGCATGTGGAAATTAGAGCCTTAGATAAGGATGATTTACATATCATAGATGGTAACGTAAATTTGTGTGTAGTAGATGACAGAACTCCTTACACACAGTATATGAAGTATGATCTTCTTCTTGCAGCTTCTACCGGTTCAAGATATATTCTCAAGGGAAGAAAGATAATGAATCCTTATTTCTTTCCATTATATGCTTGGAGGGAGATGACAACACTGCATGTTACATTCGAAAAAGTTTCTGGGGAAGACTCAAAGGATGAGAAGGAGGTTCTCAAAGGGGAGCTTCATATTTCGATAACAGAGCTTCTTAAGAGCATCATAAGCCTTAAAGGAAACAATAGAGGAAGGTTCATGTGCCTCCTATCAGGGTCTTTCTTCAGAACTTATTTCTTGCCAGTACCTCGAGGGAATCAGGGGGATTTGGTTCTGTCAGAAGACAAATCTTATCCCAGCAGCACTCTCCATGAAATTAAAGCAGAAGATGGATTCACTATCAGTTGCAGACAATGGAAGTCCAAACTTGAAGGAGATCTAAAGCTGAATCCGGTTCTTCTTCTTAATGCATATGCTATTGAGAGTTTCTGGCTGCCAACTGAGCCAAATGACTTGGTCAGAACTCTAATTGAAGAAGGGCATGAGACATGGCTTTTGAATTCCAGATTGCACCCTCTGAATCCTTCCAACGATTTTACAATTGAAGATGTTGGAAAATTTGATATCCCTGCTGCAATTAATAAGATCCTTGAACTCCATGGACCAAGCACAAAGGTGCACGTAGTTGCACACTGTGTTGGAGGCTCAGCCATACACATAGCGATCATGGGAGGTCATGTCTCTGCAACTCGTATAGCTTCTCTATCTTGCACCAACTCGTCAATGTTCTTCAAGCTTAATGCTATGTCCACATTCAAAATGTGGCTTCCTCTGATACCGTTGTCAATGTTCATACTTGGAAAAGACAAGACACTTCCTCTTTTGGAAACATCAAATATCAGCTCCCGGCACCGCCTCCTGAAACTTATAGCCAGCTTCATACCTCGAACTGAGAGATGCACCTGCTTTGAATGTGAAGTTTTCTCTGGCGTCTTTGGAAATGCATTCTGGCACGAAAATATCACCCCAACCTTGCACCAGTGGTTAACCAAGCAAAACGCGACAAGGCTTCCTATGGCAGCATTTCCCCATCTCAGAAAGATGTCCAACTCTGGTTTCATTGTAGACAGCAATGGTTGCAACTCATATTTGATCCATCCAGAAAGAATGACACTCCCAACCCTCTATATATCCGGTGGGCGATCTCTCCTTGTCACTCCTCAAACTTCTTTCCTGGCTCATAAGTACATGAAGTTACACCAGCCAGGGTTTCGACATGAAAGAGTAGTTGTAGAGGGTTTTGGTCATTCGGATTTATTGATTGGAGAAGAGTCTCACACGAAGGTGTTTCCTCACATTTTGTCTCATATAAGATTAGCTGAACAAGGGGAGGTTCATGCCAAAGGAAAGAAGTACAGTAAAGAGGCATTGGATCGGGAAGATGATCAATATTATGAAGGCAACTTCGGAATATTTGGAACTTGGTTCTCTCCTTTTGTGGTTATCATGTTGCTGTTTATCTTACTTTCTTGGTTAGTTGCAGTATTTTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1168

Amino Acids

129.25

Weight (kDa)

8.1

Isoelectric Point (pI)

40.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GMC_oxred_N PF00732 17 - 286 9e-09 GMC oxidoreductase
GMC_oxred_C PF05199 453 - 522 3.1e-10 GMC oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 621
AarI CACCTGC 2 cut(s) 970, 2921
AbsI CCTCGAGG 1 cut(s) 2259
Acc36I ACCTGC 2 cut(s) 970, 2921
AccB1I GGYRCC 2 cut(s) 1259, 2859
AccB7I CCANNNNNTGG 1 cut(s) 956
AccI GTMKAC 2 cut(s) 127, 3075
AccII CGCG 2 cut(s) 1306, 3011
AciI CCGC 5 cut(s) 78, 821, 1304, 1818, 2863
AclI AACGTT 1 cut(s) 185
AclWI GGATC 9 cut(s) 805, 901, 1286, 1299, 1412, 1510, 2590, 3097, 3390
AcoI YGGCCR 1 cut(s) 371
AcsI RAATTY 6 cut(s) 526, 1678, 1777, 1915, 2509, 2567
AcuI CTGAAG 2 cut(s) 1407, 2218
AcyI GRCGYC 1 cut(s) 2940
AdeI CACNNNGTG 1 cut(s) 2645
AfaI GTAC 6 cut(s) 260, 1071, 1607, 2256, 3197, 3365
AfiI CCNNNNNNNGG 6 cut(s) 148, 575, 820, 956, 1427, 1591
AflII CTTAAG 1 cut(s) 2165
AflIII ACRYGT 1 cut(s) 1497
AgeI ACCGGT 1 cut(s) 1988
AhlI ACTAGT 1 cut(s) 313
AjnI CCWGG 5 cut(s) 666, 1009, 1486, 3183, 3214
AjuI GAANNNNNNNTTGG 4 cut(s) 1188, 1220, 3050, 3082
AleI CACNNNNGTG 3 cut(s) 1478, 2624, 3293
AloI GAACNNNNNNTCC 2 cut(s) 550, 582
Alw21I GWGCWC 4 cut(s) 1379, 1485, 1572, 2631
Alw26I GTCTC 5 cut(s) 661, 2489, 2695, 3288, 3318
Alw44I GTGCAC 2 cut(s) 1481, 2627
AlwI GGATC 9 cut(s) 805, 901, 1286, 1299, 1412, 1510, 2590, 3097, 3390
Ama87I CYCGRG 1 cut(s) 2259
AoxI GGCC 6 cut(s) 139, 371, 1007, 1013, 1124, 1489
ApaLI GTGCAC 2 cut(s) 1481, 2627
ApoI RAATTY 6 cut(s) 526, 1678, 1777, 1915, 2509, 2567
ArsI GACNNNNNNTTYG 2 cut(s) 2488, 2520
AseI ATTAAT 1 cut(s) 2589
AsiGI ACCGGT 1 cut(s) 1988
AspA2I CCTAGG 1 cut(s) 217
AspS9I GGNCC 4 cut(s) 233, 1013, 1786, 2612
AsuC2I CCSGG 1 cut(s) 2857
AsuHPI GGTGA 1 cut(s) 2965
AsuII TTCGAA 1 cut(s) 2085
AvaI CYCGRG 1 cut(s) 2259
AvaII GGWCC 3 cut(s) 233, 1786, 2612
AvrII CCTAGG 1 cut(s) 217
AxyI CCTNAGG 1 cut(s) 1287
BaeGI GKGCMC 3 cut(s) 1262, 1485, 2631
BaeI ACNNNNGTAYC 2 cut(s) 2777, 2810
BalI TGGCCA 1 cut(s) 373
BamHI GGATCC 1 cut(s) 1291
BanI GGYRCC 2 cut(s) 1259, 2859
BbsI GAAGAC 2 cut(s) 2109, 2298
Bbv12I GWGCWC 4 cut(s) 1379, 1485, 1572, 2631
BbvCI CCTCAGC 1 cut(s) 15
BceAI ACGGC 1 cut(s) 126
BciT130I CCWGG 5 cut(s) 668, 1011, 1488, 3185, 3216
BciVI GTATCC 1 cut(s) 1807
BclI TGATCA 1 cut(s) 3394
BcnI CCSGG 1 cut(s) 2857
BcoDI GTCTC 5 cut(s) 661, 2489, 2695, 3288, 3318
BcuI ACTAGT 1 cut(s) 313
BfaI CTAG 8 cut(s) 218, 278, 314, 354, 653, 932, 1343, 3502
BfmI CTRYAG 2 cut(s) 414, 1560
BfrI CTTAAG 1 cut(s) 2165
BfuAI ACCTGC 2 cut(s) 970, 2921
BfuI GTATCC 1 cut(s) 1807
BglII AGATCT 1 cut(s) 2386
BlnI CCTAGG 1 cut(s) 217
BlpI GCTNAGC 3 cut(s) 586, 1566, 2656
Bme1390I CCNGG 6 cut(s) 668, 1011, 1488, 2857, 3185, 3216
Bme18I GGWCC 3 cut(s) 233, 1786, 2612
BmeT110I CYCGRG 1 cut(s) 2259
BmgT120I GGNCC 4 cut(s) 233, 1013, 1786, 2612
BmiI GGNNCC 5 cut(s) 1142, 1183, 1261, 1293, 2861
BmrFI CCNGG 6 cut(s) 668, 1011, 1488, 2857, 3185, 3216
BmsI GCATC 6 cut(s) 40, 232, 324, 1495, 2181, 2897
BpiI GAAGAC 2 cut(s) 2109, 2298
BpmI CTGGAG 1 cut(s) 224
Bpu10I CCTNAGC 2 cut(s) 15, 156
Bpu1102I GCTNAGC 3 cut(s) 586, 1566, 2656
Bpu14I TTCGAA 1 cut(s) 2085
BpuEI CTTGAG 2 cut(s) 1586, 1991
BpuMI CCSGG 1 cut(s) 2857
Bsa29I ATCGAT 1 cut(s) 1019
BsaAI YACGTR 2 cut(s) 1498, 2632
BsaHI GRCGYC 1 cut(s) 2940
BsaJI CCNNGG 7 cut(s) 217, 1010, 1147, 1486, 1651, 2608, 3215
BsaWI WCCGGW 4 cut(s) 1371, 1988, 2401, 3143
BsaXI ACNNNNNCTCC 4 cut(s) 1845, 1875, 2673, 2703
Bsc4I CCNNNNNNNGG 6 cut(s) 148, 575, 820, 956, 1427, 1591
Bse118I RCCGGY 1 cut(s) 1988
Bse1I ACTGG 9 cut(s) 105, 344, 853, 950, 1135, 1142, 1789, 2252, 2989
Bse21I CCTNAGG 1 cut(s) 1287
Bse3DI GCAATG 3 cut(s) 1206, 1624, 3088
BseBI CCWGG 5 cut(s) 668, 1011, 1488, 3185, 3216
BseCI ATCGAT 1 cut(s) 1019
BseDI CCNNGG 7 cut(s) 217, 1010, 1147, 1486, 1651, 2608, 3215
BseLI CCNNNNNNNGG 6 cut(s) 148, 575, 820, 956, 1427, 1591
BseMI GCAATG 3 cut(s) 1206, 1624, 3088
BseNI ACTGG 9 cut(s) 105, 344, 853, 950, 1135, 1142, 1789, 2252, 2989
BseRI GAGGAG 2 cut(s) 20, 3159
BseSI GKGCMC 3 cut(s) 1262, 1485, 2631
BseYI CCCAGC 1 cut(s) 2306
BsgI GTGCAG 2 cut(s) 722, 1610
Bsh1236I CGCG 2 cut(s) 1306, 3011
BshFI GGCC 6 cut(s) 141, 373, 1009, 1015, 1126, 1491
BshNI GGYRCC 2 cut(s) 1259, 2859
BshTI ACCGGT 1 cut(s) 1988
BshVI ATCGAT 1 cut(s) 1019
BsiHKAI GWGCWC 4 cut(s) 1379, 1485, 1572, 2631
BsiHKCI CYCGRG 1 cut(s) 2259
BsiSI CCGG 5 cut(s) 1372, 1989, 2402, 2857, 3144
BslFI GGGAC 1 cut(s) 1233
BslI CCNNNNNNNGG 6 cut(s) 148, 575, 820, 956, 1427, 1591
BsmAI GTCTC 5 cut(s) 661, 2489, 2695, 3288, 3318
BsmFI GGGAC 1 cut(s) 1233
BsmI GAATGC 4 cut(s) 325, 441, 698, 2954
BsnI GGCC 6 cut(s) 141, 373, 1009, 1015, 1126, 1491
BsoBI CYCGRG 1 cut(s) 2259
Bsp119I TTCGAA 1 cut(s) 2085
Bsp1286I GDGCHC 5 cut(s) 1262, 1379, 1485, 1572, 2631
Bsp1720I GCTNAGC 3 cut(s) 586, 1566, 2656
Bsp19I CCATGG 2 cut(s) 1147, 2608
BspACI CCGC 5 cut(s) 78, 821, 1304, 1818, 2863
BspANI GGCC 6 cut(s) 141, 373, 1009, 1015, 1126, 1491
BspDI ATCGAT 1 cut(s) 1019
BspFNI CGCG 2 cut(s) 1306, 3011
BspLI GGNNCC 5 cut(s) 1142, 1183, 1261, 1293, 2861
BspMAI CTGCAG 1 cut(s) 418
BspMI ACCTGC 2 cut(s) 970, 2921
BspPI GGATC 9 cut(s) 805, 901, 1286, 1299, 1412, 1510, 2590, 3097, 3390
BspT104I TTCGAA 1 cut(s) 2085
BspT107I GGYRCC 2 cut(s) 1259, 2859
BspTI CTTAAG 1 cut(s) 2165
BsrDI GCAATG 3 cut(s) 1206, 1624, 3088
BsrFI RCCGGY 1 cut(s) 1988
BsrI ACTGG 9 cut(s) 105, 344, 853, 950, 1135, 1142, 1789, 2252, 2989
BssAI RCCGGY 1 cut(s) 1988
BssECI CCNNGG 7 cut(s) 217, 1010, 1147, 1486, 1651, 2608, 3215
BssNI GRCGYC 1 cut(s) 2940
BssT1I CCWWGG 3 cut(s) 217, 1147, 2608
Bst2UI CCWGG 5 cut(s) 668, 1011, 1488, 3185, 3216
Bst4CI ACNGT 9 cut(s) 602, 922, 1561, 1691, 1705, 1953, 2645, 2790, 3368
Bst6I CTCTTC 3 cut(s) 854, 1839, 3273
BstACI GRCGYC 1 cut(s) 2940
BstAFI CTTAAG 1 cut(s) 2165
BstAPI GCANNNNNTGC 1 cut(s) 3087
BstBAI YACGTR 2 cut(s) 1498, 2632
BstBI TTCGAA 1 cut(s) 2085
BstC8I GCNNGC 6 cut(s) 12, 94, 112, 339, 1192, 2884
BstDSI CCRYGG 2 cut(s) 1147, 2608
BstENI CCTNNNNNAGG 1 cut(s) 1589
BstFNI CGCG 2 cut(s) 1306, 3011
BstMAI GTCTC 5 cut(s) 661, 2489, 2695, 3288, 3318
BstMWI GCNNNNNNNGC 8 cut(s) 287, 416, 668, 932, 1196, 2178, 2452, 3087
BstNI CCWGG 5 cut(s) 668, 1011, 1488, 3185, 3216
BstNSI RCATGY 3 cut(s) 724, 1862, 2078
BstSCI CCNGG 6 cut(s) 666, 1009, 1486, 2855, 3183, 3214
BstSFI CTRYAG 2 cut(s) 414, 1560
BstSLI GKGCMC 3 cut(s) 1262, 1485, 2631
BstUI CGCG 2 cut(s) 1306, 3011
BstV2I GAAGAC 2 cut(s) 2109, 2298
BstX2I RGATCY 5 cut(s) 893, 1291, 1417, 2386, 2595
BstXI CCANNNNNNTGG 1 cut(s) 381
BstYI RGATCY 5 cut(s) 893, 1291, 1417, 2386, 2595
Bsu15I ATCGAT 1 cut(s) 1019
Bsu36I CCTNAGG 1 cut(s) 1287
BsuI GTATCC 1 cut(s) 1807
BsuRI GGCC 6 cut(s) 141, 373, 1009, 1015, 1126, 1491
BsuTUI ATCGAT 1 cut(s) 1019
BtgI CCRYGG 2 cut(s) 1147, 2608
BtsI GCAGTG 4 cut(s) 291, 1221, 1752, 2069
BtsIMutI CAGTG 8 cut(s) 291, 636, 918, 1221, 1752, 2069, 2641, 2996
BveI ACCTGC 2 cut(s) 970, 2921
Cac8I GCNNGC 6 cut(s) 12, 94, 112, 339, 1192, 2884
Cfr10I RCCGGY 1 cut(s) 1988
Cfr13I GGNCC 4 cut(s) 233, 1013, 1786, 2612
ClaI ATCGAT 1 cut(s) 1019
CseI GACGC 2 cut(s) 554, 2929
Csp6I GTAC 6 cut(s) 259, 1070, 1606, 2255, 3196, 3364
CspAI ACCGGT 1 cut(s) 1988
CviQI GTAC 6 cut(s) 259, 1070, 1606, 2255, 3196, 3364
DraI TTTAAA 1 cut(s) 1102
DraIII CACNNNGTG 1 cut(s) 2645
EaeI YGGCCR 1 cut(s) 371
Eam1104I CTCTTC 3 cut(s) 854, 1839, 3273
EarI CTCTTC 3 cut(s) 854, 1839, 3273
Eco130I CCWWGG 3 cut(s) 217, 1147, 2608
Eco32I GATATC 1 cut(s) 2575
Eco47I GGWCC 3 cut(s) 233, 1786, 2612
Eco57I CTGAAG 2 cut(s) 1407, 2218
Eco81I CCTNAGG 1 cut(s) 1287
Eco88I CYCGRG 1 cut(s) 2259
EcoNI CCTNNNNNAGG 1 cut(s) 1589
EcoRI GAATTC 2 cut(s) 1777, 2509
EcoRII CCWGG 5 cut(s) 666, 1009, 1486, 3183, 3214
EcoRV GATATC 1 cut(s) 2575
EcoT14I CCWWGG 3 cut(s) 217, 1147, 2608
EcoT22I ATGCAT 3 cut(s) 726, 2422, 2956
ErhI CCWWGG 3 cut(s) 217, 1147, 2608
FalI AAGNNNNNCTT 2 cut(s) 2124, 2156
FaqI GGGAC 1 cut(s) 1233
FauI CCCGC 2 cut(s) 814, 1311
FauNDI CATATG 1 cut(s) 2422
FbaI TGATCA 1 cut(s) 3394
FblI GTMKAC 2 cut(s) 127, 3075
FspBI CTAG 8 cut(s) 218, 278, 314, 354, 653, 932, 1343, 3502
GsaI CCCAGC 1 cut(s) 2310
GsuI CTGGAG 1 cut(s) 224
HaeIII GGCC 6 cut(s) 141, 373, 1009, 1015, 1126, 1491
HapII CCGG 5 cut(s) 1372, 1989, 2402, 2857, 3144
HgaI GACGC 2 cut(s) 554, 2929
Hin1I GRCGYC 1 cut(s) 2940
HincII GTYRAC 1 cut(s) 2997
HindII GTYRAC 1 cut(s) 2997
HindIII AAGCTT 4 cut(s) 408, 515, 1317, 2744
HpaI GTTAAC 1 cut(s) 2997
HpaII CCGG 5 cut(s) 1372, 1989, 2402, 2857, 3144
HphI GGTGA 1 cut(s) 2965
HpyCH4III ACNGT 9 cut(s) 602, 922, 1561, 1691, 1705, 1953, 2645, 2790, 3368
HpyCH4IV ACGT 4 cut(s) 185, 1497, 1911, 2631
HpyF10VI GCNNNNNNNGC 8 cut(s) 287, 416, 668, 932, 1196, 2178, 2452, 3087
HpySE526I ACGT 4 cut(s) 185, 1497, 1911, 2631
Hsp92I GRCGYC 1 cut(s) 2940
Ksp22I TGATCA 1 cut(s) 3394
KspAI GTTAAC 1 cut(s) 2997
LmnI GCTCC 4 cut(s) 7, 1374, 2137, 2858
LweI GCATC 6 cut(s) 40, 232, 324, 1495, 2181, 2897
MaeI CTAG 8 cut(s) 218, 278, 314, 354, 653, 932, 1343, 3502
MaeII ACGT 4 cut(s) 185, 1497, 1911, 2631
MaeIII GTNAC 7 cut(s) 855, 1111, 1133, 1907, 2077, 3163, 3204
MfeI CAATTG 1 cut(s) 2550
MflI RGATCY 5 cut(s) 893, 1291, 1417, 2386, 2595
MhlI GDGCHC 5 cut(s) 1262, 1379, 1485, 1572, 2631
MlsI TGGCCA 1 cut(s) 373
MluNI TGGCCA 1 cut(s) 373
MlyI GAGTC 5 cut(s) 985, 1475, 1670, 2099, 3290
MmeI TCCRAC 7 cut(s) 760, 1791, 1831, 2542, 2562, 2629, 3081
Mox20I TGGCCA 1 cut(s) 373
Mph1103I ATGCAT 3 cut(s) 726, 2422, 2956
MscI TGGCCA 1 cut(s) 373
MslI CAYNNNNRTG 4 cut(s) 1120, 1478, 2624, 3293
Msp20I TGGCCA 1 cut(s) 373
MspA1I CMGCKG 3 cut(s) 821, 906, 1478
MspCI CTTAAG 1 cut(s) 2165
MspI CCGG 5 cut(s) 1372, 1989, 2402, 2857, 3144
MspR9I CCNGG 6 cut(s) 668, 1011, 1488, 2857, 3185, 3216
MunI CAATTG 1 cut(s) 2550
Mva1269I GAATGC 4 cut(s) 325, 441, 698, 2954
MvaI CCWGG 5 cut(s) 668, 1011, 1488, 3185, 3216
MvnI CGCG 2 cut(s) 1306, 3011
MwoI GCNNNNNNNGC 8 cut(s) 287, 416, 668, 932, 1196, 2178, 2452, 3087
NciI CCSGG 1 cut(s) 2857
NcoI CCATGG 2 cut(s) 1147, 2608
NdeI CATATG 1 cut(s) 2422
NlaIV GGNNCC 5 cut(s) 1142, 1183, 1261, 1293, 2861
NmuCI GTSAC 2 cut(s) 855, 3163
NsiI ATGCAT 3 cut(s) 726, 2422, 2956
NspI RCATGY 3 cut(s) 724, 1862, 2078
NspV TTCGAA 1 cut(s) 2085
OliI CACNNNNGTG 3 cut(s) 1478, 2624, 3293
PaeR7I CTCGAG 1 cut(s) 2259
PaqCI CACCTGC 2 cut(s) 970, 2921
PcsI WCGNNNNNNNCGW 1 cut(s) 355
PctI GAATGC 4 cut(s) 325, 441, 698, 2954
PflFI GACNNNGTC 1 cut(s) 2465
PflMI CCANNNNNTGG 1 cut(s) 956
PinAI ACCGGT 1 cut(s) 1988
PleI GAGTC 5 cut(s) 985, 1474, 1669, 2099, 3289
PpsI GAGTC 5 cut(s) 985, 1474, 1669, 2099, 3289
Ppu21I YACGTR 2 cut(s) 1498, 2632
PshBI ATTAAT 1 cut(s) 2589
PsiI TTATAA 1 cut(s) 621
Psp1406I AACGTT 1 cut(s) 185
Psp6I CCWGG 5 cut(s) 666, 1009, 1486, 3183, 3214
PspFI CCCAGC 1 cut(s) 2306
PspGI CCWGG 5 cut(s) 666, 1009, 1486, 3183, 3214
PspN4I GGNNCC 5 cut(s) 1142, 1183, 1261, 1293, 2861
PspPI GGNCC 4 cut(s) 233, 1013, 1786, 2612
PspXI VCTCGAGB 1 cut(s) 2259
PstI CTGCAG 1 cut(s) 418
PsuI RGATCY 5 cut(s) 893, 1291, 1417, 2386, 2595
PsyI GACNNNGTC 1 cut(s) 2465
PvuII CAGCTG 2 cut(s) 906, 1478
RsaI GTAC 6 cut(s) 260, 1071, 1607, 2256, 3197, 3365
RsaNI GTAC 6 cut(s) 259, 1070, 1606, 2255, 3196, 3364
RseI CAYNNNNRTG 4 cut(s) 1120, 1478, 2624, 3293
Sau96I GGNCC 4 cut(s) 233, 1013, 1786, 2612
SchI GAGTC 5 cut(s) 985, 1475, 1670, 2099, 3290
ScrFI CCNGG 6 cut(s) 668, 1011, 1488, 2857, 3185, 3216
SduI GDGCHC 5 cut(s) 1262, 1379, 1485, 1572, 2631
SfaNI GCATC 6 cut(s) 40, 232, 324, 1495, 2181, 2897
SfcI CTRYAG 2 cut(s) 414, 1560
Sfr274I CTCGAG 1 cut(s) 2259
SfuI TTCGAA 1 cut(s) 2085
SinI GGWCC 3 cut(s) 233, 1786, 2612
SlaI CTCGAG 1 cut(s) 2259
SmiMI CAYNNNNRTG 4 cut(s) 1120, 1478, 2624, 3293
SmlI CTYRAG 4 cut(s) 1601, 2006, 2165, 2259
SmoI CTYRAG 4 cut(s) 1601, 2006, 2165, 2259
SpeI ACTAGT 1 cut(s) 313
SsiI CCGC 5 cut(s) 78, 821, 1304, 1818, 2863
SspI AATATT 3 cut(s) 471, 3401, 3423
SspMI CTAG 8 cut(s) 218, 278, 314, 354, 653, 932, 1343, 3502
StyD4I CCNGG 6 cut(s) 666, 1009, 1486, 2855, 3183, 3214
StyI CCWWGG 3 cut(s) 217, 1147, 2608
TaaI ACNGT 9 cut(s) 602, 922, 1561, 1691, 1705, 1953, 2645, 2790, 3368
TaiI ACGT 4 cut(s) 188, 1500, 1914, 2634
TaqI TCGA 6 cut(s) 1019, 2085, 2150, 2260, 2896, 3223
TatI WGTACW 4 cut(s) 1069, 1605, 3195, 3363
TscAI CASTG 8 cut(s) 291, 643, 925, 1221, 1759, 2076, 2648, 2996
TseFI GTSAC 2 cut(s) 855, 3163
Tsp45I GTSAC 2 cut(s) 855, 3163
TspGWI ACGGA 1 cut(s) 1134
TspRI CASTG 8 cut(s) 291, 643, 925, 1221, 1759, 2076, 2648, 2996
Tth111I GACNNNGTC 1 cut(s) 2465
Van91I CCANNNNNTGG 1 cut(s) 956
Vha464I CTTAAG 1 cut(s) 2165
VneI GTGCAC 2 cut(s) 1481, 2627
VpaK11BI GGWCC 3 cut(s) 233, 1786, 2612
VspI ATTAAT 1 cut(s) 2589
XagI CCTNNNNNAGG 1 cut(s) 1589
XapI RAATTY 6 cut(s) 526, 1678, 1777, 1915, 2509, 2567
XceI RCATGY 3 cut(s) 724, 1862, 2078
XcmI CCANNNNNNNNNTGG 1 cut(s) 2049
XhoI CTCGAG 1 cut(s) 2259
XmaJI CCTAGG 1 cut(s) 217
XmiI GTMKAC 2 cut(s) 127, 3075
XspI CTAG 8 cut(s) 218, 278, 314, 354, 653, 932, 1343, 3502
Zsp2I ATGCAT 3 cut(s) 726, 2422, 2956
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.