Rw3G017570

GMC oxidoreductase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Reverse (-)
19142643 .. 19148734
6092 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G017570.1

Sequence Viewer

Length: 3456 bp
ATGGAGGAGCAAGCAGAGGTAGAAGGCAGTTTTGGACAAGAAAGTTATGATGCAGTTGTTGTGGGGTCTGGTTATGGAGGTTCTGTTGCTGCTTGTCGGCTGGCTATGGCAGGCGTAAGGGTGTGTCTACTTGAAAAGGGCCGGAAATGGGAAGCGCAGGACTTCCCAACTGACAGCTTCAAAATCTTATCGGCTGTGAGGATGGAGAACCAGAACCTAGGTGTTAGCTATGGACCAAAAGATGGTTTATTTCAGGTGTACGAGCAAAATGATTCTCTAGCAGCAGTGGCTTGTGGGCTTGGTGGAGGTTCACTAGTGAATGCTGGAGTTATGATGCCAGCACCTGTTCGTGCTAGACGGCATCCAAAATGGCCGAAGGAATGGGAAAGGAATTGGGGTAGTTGTGAAGCTTCTGCTGCAGACATGCTGAGAATACAAAGCATTCCAGTCAAGTTTCCTTCCGCGAAAATTTTGGAAGAAGCTGCTGATGGAGTAACTTTTGACACTTCAATAAAGCTTAGTGTGAATTTTGACATTGAAGAACCAACATCAAATGGAACGAAGCGTCCACAGATGGGTAGCTGCTTAGCCTGTGGAAACTGTCTTTCTGGATGTCCTTATAATGCCAAAAGTTCGACTGACAAAAATTATCTAGTCTCAGCAATCCAGGCTGGATGTATTGTCAAAACAGAATGCCAAGCGCAGTATGTGGTTAGAAACATGCATGGCCATTTCCAACATAAAGGAAAAAATGGCAGGAGATGGCTCGTTTACTTGAATGAGATTGACTATGTGACCTGTGATTTTGTGATCCTATCAGCGGGAGTTTTTGGCACAACTGAGATACTCTTCCAATCACAAATGAGAGGACTGAAACTTTCAGAAGCACTTGGATCTGGATTCAGCTGTAATGGGAATACCGTGGCTTATCTCGCTGGAACGCCAGCACCAATCAATGGTTATGGATTAGACAGAAAGCAGGTGTTCACAACTCCTTTCGAAGAAAGGCCAGGGCCATCAATTTCTTCATCTTTCACTTCTTCACTCGGTTTTACAATCCAGAGTGCTGTACTTCCAATAGCTTATCCATACCTGCTATTTAAAGGAATCACAACATATGGATGGCCTGCTGGGTACTGGTTCCTCCATGGAATTATAGACAAGATAAGACACATTATAGGTTCCAAAGCAAGCCAAGCAATGATTCTTATTGCAGTGGGACATGATGAAAGTGATGGTAAGATCATATTAGAGAAGGGCACCAACAAAATCTGCTTTACTCCGCCTCAGGATCCCCTTCTCCCACGAAAGATTAAAGCTTTTCAGAAGCTCACTAAGAAATTAGGAGGACTTCTCTTCATGTCAAAATACCGAAGCACAGCAGTTCATCTTTTAGGTGGGTGCAATGTGTCTTCAGATCCTTCAGGTGGTGTTTGCAACCCCAATGGACAGGTTTTTGAACCAGACTCATCCTCAACAGTGCATCCCGGCCTCTACGTGTGTGATGCTTCTTTGATCCCATGTTCTGTTGGGATAAATCCATCTCTTACCATCACAACTGCAGCTGAGCACATAAGTAAGAACCTTGTGCAGGAAGCTCTGAAGTACAAGATCAACAATGGTCGTGAATGTGTTGTGAAAACTGCTGACCAAGGTCAAGAACCCTTCATCGAGAAGAATGTTATTAACTGTCAGAGAGAAATGGTCATGGTTAAAGAAACCATGAAAGGTTATGTTGGGGGTATGCCATGCACTGCTTATCTAAAAATGAGGATGAATTCTCAGGACCAGACTTTCTCTGATGTAAAGTTGGGTACCGGAAAATCCCATCCCCTTCTTAGAGGTAAAGTTGGAGGACATGTAGAAATTAGAGCCTTTGAGAAGGATGATTTACATATCATAGATGGGAACGTAAATTTGTGTGTAGTTGATGACAGAACTCCATACACACAGTATATGCAGTATGATTTTCTTCTTGCAGCTTCTACTGGTTCAAGATATATTCTCAAGGGAAGAAAGATAATGAATCCATATTTCTTTCCATTATATGCTTGGAGGGAGATGACTACACTGCATGTTACATTCGAAAAAGTTTTTGAGGAAGACTCAGAGGATGAGAAGGTGGTTCTCAAAGGGGAGCTTCATATTTCGATGACAGAGCTTCTTAAGAGCATCATAAGCCTTCAAGGAAACAATAGGGGAAGGTTTATGTGCCTCCTCTCAGGGTCTTTCTTAAGAACTTATTTCTTGCCAATACCTCGAGGGAATCAGGGGGATTTAGTTCTGTCAGAAGATAAATCTTATCCAAGCAGCACTCTCCATGAAATAAAAGCAGAAGATGGATTCACCATCAGTTGCAGACAATGGAAGTCAAAACTTAAAGGAGATGAGAAACTGAATCCGGTTCTCCTTCTTAATGCATATGCTATTGAGAGTTTCTGGCTGCCAACTGAGCCGAATGACTTGGTCAGAACTTTAATTGAAGAAGGGCATGAAACATGGTTATTGAATTCGAGATTGCACCCTCTGAATCCTTCTAACGATTTTACAATTGAAGATGTTGGAAAATTTGATATCCCTGCTGCAATTAATAAGATCCTTGAAATCCATGGACGAAGCACAAAGGTGCACGTAGTTGCACACTGTGTTGGAGGCTCAGCCATACACATAGCTATCATGGGAGGTCATGTCTCTGCAACCCATATAGCTTCTCTGTCTTGCACCAACTCGTCAATGTTCTTCAAGCTTAATGCTATGTCCACATTCAAAATGTGGCTTCCTCTGATACCGTTGTCAATGTTCATACTTGGAAACGACAAGACACTTCCTCTTTTGGAAACATCAAATATCAGCTCCCGGCACCGCCTCCTGAAACTGATAGCTAGCTTCATACCTCGAACTGAGAGATGCACCTGCTTTGAATGTGAAGTTTTCTCTGGCGTATTTGGAAATGCATTCTGGCACGAAAATATCACCCCAACCTTGCACCAGTGGTTGACCCAGAAAAACGCGACAAGGCTTCCTATGGCAGCATTTCCCCATCTCAGAAAGATGTCCAACTCTGGTTTTATTGTAGACAGCAATGGTTGCAACTCATATTTGATCCATCCAGAAAGAATGACACTCCCAACGCTCTATATATCCGGTGGGCGATCTCTCCTTGTGACTCCTCAAACTTCTTTCCTAGCTCATAAGTACATGAAGTTGCACCAGCCAGGGTTTAGACATGAAAGGGTAGTTGTGGAGGGTTTTGGGCATTCAGATTTATTGATTGGAGGAGAGTCTCACAAGAAGATTCATGCCAAAGGAAAGAAGTACAGTAAAGAGGCCTTGGATCGGGAAGATGATCAATATTATGAAGGCAACTTTGGAATATTTGGAACTTGGTTCTCTCCTTTTGTGGTTATTATGTTGCTGTTTATCTCACTTTCTTGGTTGGTGGCAGTATTTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1151

Amino Acids

127.56

Weight (kDa)

8.25

Isoelectric Point (pI)

41.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GMC_oxred_N PF00732 17 - 286 5.5e-09 GMC oxidoreductase
GMC_oxred_C PF05199 453 - 522 5e-10 GMC oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 621
AarI CACCTGC 2 cut(s) 970, 2921
AbsI CCTCGAGG 1 cut(s) 2259
Acc36I ACCTGC 3 cut(s) 970, 1101, 2921
Acc65I GGTACC 1 cut(s) 1814
AccB1I GGYRCC 3 cut(s) 1259, 1814, 2859
AccB7I CCANNNNNTGG 2 cut(s) 242, 956
AccI GTMKAC 2 cut(s) 127, 3075
AccII CGCG 2 cut(s) 464, 3011
AciI CCGC 4 cut(s) 462, 821, 1283, 2863
AclWI GGATC 9 cut(s) 805, 901, 1286, 1299, 1412, 1510, 2590, 3097, 3342
AcoI YGGCCR 2 cut(s) 371, 727
AcsI RAATTY 6 cut(s) 468, 526, 1777, 1915, 2509, 2567
AcuI CTGAAG 3 cut(s) 1398, 1407, 1622
AdeI CACNNNGTG 1 cut(s) 2645
AfaI GTAC 7 cut(s) 260, 1071, 1136, 1607, 1816, 3197, 3317
AfiI CCNNNNNNNGG 8 cut(s) 148, 242, 575, 820, 956, 1427, 1591, 3336
AflII CTTAAG 2 cut(s) 2165, 2233
AflIII ACRYGT 2 cut(s) 1497, 1858
AhlI ACTAGT 1 cut(s) 313
AjnI CCWGG 3 cut(s) 666, 1009, 3214
AjuI GAANNNNNNNTTGG 6 cut(s) 15, 47, 1188, 1220, 3351, 3383
AleI CACNNNNGTG 1 cut(s) 2624
AloI GAACNNNNNNTCC 2 cut(s) 550, 582
Alw21I GWGCWC 2 cut(s) 1572, 2631
Alw26I GTCTC 3 cut(s) 661, 2695, 3288
Alw44I GTGCAC 1 cut(s) 2627
AlwI GGATC 9 cut(s) 805, 901, 1286, 1299, 1412, 1510, 2590, 3097, 3342
AlwNI CAGNNNCTG 1 cut(s) 344
Ama87I CYCGRG 1 cut(s) 2259
AoxI GGCC 8 cut(s) 139, 371, 727, 1007, 1013, 1124, 1489, 3327
ApaLI GTGCAC 1 cut(s) 2627
ApoI RAATTY 6 cut(s) 468, 526, 1777, 1915, 2509, 2567
AseI ATTAAT 1 cut(s) 2589
Asp718I GGTACC 1 cut(s) 1814
AspA2I CCTAGG 1 cut(s) 217
AspLEI GCGC 2 cut(s) 157, 703
AspS9I GGNCC 4 cut(s) 139, 233, 1013, 1786
AsuC2I CCSGG 2 cut(s) 1488, 2857
AsuHPI GGTGA 2 cut(s) 2338, 2965
AsuII TTCGAA 2 cut(s) 999, 2085
AsuNHI GCTAGC 1 cut(s) 2882
AvaI CYCGRG 1 cut(s) 2259
AvaII GGWCC 2 cut(s) 233, 1786
AvrII CCTAGG 1 cut(s) 217
AxyI CCTNAGG 1 cut(s) 1287
BaeGI GKGCMC 2 cut(s) 1262, 2631
BaeI ACNNNNGTAYC 2 cut(s) 2777, 2810
BalI TGGCCA 1 cut(s) 729
BamHI GGATCC 1 cut(s) 1291
BanI GGYRCC 3 cut(s) 1259, 1814, 2859
BbsI GAAGAC 2 cut(s) 1404, 2109
Bbv12I GWGCWC 2 cut(s) 1572, 2631
BceAI ACGGC 1 cut(s) 374
BciT130I CCWGG 3 cut(s) 668, 1011, 3216
BclI TGATCA 1 cut(s) 3346
BcnI CCSGG 2 cut(s) 1488, 2857
BcoDI GTCTC 3 cut(s) 661, 2695, 3288
BcuI ACTAGT 1 cut(s) 313
BfaI CTAG 7 cut(s) 218, 278, 314, 354, 653, 2883, 3185
BfmI CTRYAG 2 cut(s) 417, 1560
BfrI CTTAAG 2 cut(s) 2165, 2233
BfuAI ACCTGC 3 cut(s) 970, 1101, 2921
BlnI CCTAGG 1 cut(s) 217
BlpI GCTNAGC 3 cut(s) 586, 1566, 2656
Bme1390I CCNGG 5 cut(s) 668, 1011, 1488, 2857, 3216
Bme18I GGWCC 2 cut(s) 233, 1786
BmeT110I CYCGRG 1 cut(s) 2259
BmgT120I GGNCC 4 cut(s) 139, 233, 1013, 1786
BmiI GGNNCC 6 cut(s) 1142, 1183, 1261, 1293, 1816, 2861
BmrFI CCNGG 5 cut(s) 668, 1011, 1488, 2857, 3216
BmsI GCATC 7 cut(s) 40, 324, 370, 1492, 1495, 2181, 2897
BmtI GCTAGC 1 cut(s) 2886
BoxI GACNNNNGTC 1 cut(s) 1653
BpiI GAAGAC 2 cut(s) 1404, 2109
BplI GAGNNNNNCTC 4 cut(s) 1338, 1370, 2090, 2122
BpmI CTGGAG 1 cut(s) 345
Bpu1102I GCTNAGC 3 cut(s) 586, 1566, 2656
Bpu14I TTCGAA 2 cut(s) 999, 2085
BpuEI CTTGAG 1 cut(s) 1991
BpuMI CCSGG 2 cut(s) 1488, 2857
BsaAI YACGTR 2 cut(s) 1498, 2632
BsaJI CCNNGG 8 cut(s) 217, 921, 1010, 1147, 1651, 2608, 3215, 3330
BsaWI WCCGGW 3 cut(s) 1817, 2401, 3143
BsaXI ACNNNNNCTCC 6 cut(s) 69, 99, 1845, 1875, 2673, 2703
Bsc4I CCNNNNNNNGG 8 cut(s) 148, 242, 575, 820, 956, 1427, 1591, 3336
Bse1I ACTGG 4 cut(s) 446, 1142, 1993, 2989
Bse21I CCTNAGG 1 cut(s) 1287
Bse3DI GCAATG 3 cut(s) 1206, 1411, 3088
BseBI CCWGG 3 cut(s) 668, 1011, 3216
BseDI CCNNGG 8 cut(s) 217, 921, 1010, 1147, 1651, 2608, 3215, 3330
BseLI CCNNNNNNNGG 8 cut(s) 148, 242, 575, 820, 956, 1427, 1591, 3336
BseMI GCAATG 3 cut(s) 1206, 1411, 3088
BseNI ACTGG 4 cut(s) 446, 1142, 1993, 2989
BseRI GAGGAG 4 cut(s) 20, 2207, 3159, 3291
BseSI GKGCMC 2 cut(s) 1262, 2631
BseYI CCCAGC 1 cut(s) 1130
BsgI GTGCAG 1 cut(s) 1610
Bsh1236I CGCG 2 cut(s) 464, 3011
BshFI GGCC 8 cut(s) 141, 373, 729, 1009, 1015, 1126, 1491, 3329
BshNI GGYRCC 3 cut(s) 1259, 1814, 2859
BsiHKAI GWGCWC 2 cut(s) 1572, 2631
BsiHKCI CYCGRG 1 cut(s) 2259
BsiSI CCGG 6 cut(s) 142, 1488, 1818, 2402, 2857, 3144
BslFI GGGAC 1 cut(s) 1233
BslI CCNNNNNNNGG 8 cut(s) 148, 242, 575, 820, 956, 1427, 1591, 3336
BsmAI GTCTC 3 cut(s) 661, 2695, 3288
BsmFI GGGAC 1 cut(s) 1233
BsmI GAATGC 5 cut(s) 325, 441, 698, 2954, 3256
BsnI GGCC 8 cut(s) 141, 373, 729, 1009, 1015, 1126, 1491, 3329
BsoBI CYCGRG 1 cut(s) 2259
Bsp119I TTCGAA 2 cut(s) 999, 2085
Bsp1286I GDGCHC 3 cut(s) 1262, 1572, 2631
Bsp1720I GCTNAGC 3 cut(s) 586, 1566, 2656
Bsp19I CCATGG 2 cut(s) 1147, 2608
BspACI CCGC 4 cut(s) 462, 821, 1283, 2863
BspANI GGCC 8 cut(s) 141, 373, 729, 1009, 1015, 1126, 1491, 3329
BspFNI CGCG 2 cut(s) 464, 3011
BspLI GGNNCC 6 cut(s) 1142, 1183, 1261, 1293, 1816, 2861
BspMAI CTGCAG 2 cut(s) 421, 1564
BspMI ACCTGC 3 cut(s) 970, 1101, 2921
BspOI GCTAGC 1 cut(s) 2886
BspPI GGATC 9 cut(s) 805, 901, 1286, 1299, 1412, 1510, 2590, 3097, 3342
BspT104I TTCGAA 2 cut(s) 999, 2085
BspT107I GGYRCC 3 cut(s) 1259, 1814, 2859
BspTI CTTAAG 2 cut(s) 2165, 2233
BsrDI GCAATG 3 cut(s) 1206, 1411, 3088
BsrI ACTGG 4 cut(s) 446, 1142, 1993, 2989
BssECI CCNNGG 8 cut(s) 217, 921, 1010, 1147, 1651, 2608, 3215, 3330
BssT1I CCWWGG 5 cut(s) 217, 1147, 1651, 2608, 3330
Bst2UI CCWGG 3 cut(s) 668, 1011, 3216
Bst4CI ACNGT 8 cut(s) 602, 922, 1480, 1691, 1953, 2645, 2790, 3320
Bst6I CTCTTC 2 cut(s) 854, 1361
BstAFI CTTAAG 2 cut(s) 2165, 2233
BstAPI GCANNNNNTGC 1 cut(s) 3087
BstBAI YACGTR 2 cut(s) 1498, 2632
BstBI TTCGAA 2 cut(s) 999, 2085
BstC8I GCNNGC 8 cut(s) 12, 102, 112, 339, 945, 1128, 1192, 2884
BstDSI CCRYGG 3 cut(s) 921, 1147, 2608
BstENI CCTNNNNNAGG 1 cut(s) 1589
BstFNI CGCG 2 cut(s) 464, 3011
BstHHI GCGC 2 cut(s) 157, 703
BstMAI GTCTC 3 cut(s) 661, 2695, 3288
BstMWI GCNNNNNNNGC 8 cut(s) 287, 416, 668, 932, 1196, 2178, 2452, 3087
BstNI CCWGG 3 cut(s) 668, 1011, 3216
BstNSI RCATGY 4 cut(s) 427, 724, 1862, 2078
BstPAI GACNNNNGTC 1 cut(s) 1653
BstSCI CCNGG 5 cut(s) 666, 1009, 1486, 2855, 3214
BstSFI CTRYAG 2 cut(s) 417, 1560
BstSLI GKGCMC 2 cut(s) 1262, 2631
BstUI CGCG 2 cut(s) 464, 3011
BstV2I GAAGAC 2 cut(s) 1404, 2109
BstX2I RGATCY 4 cut(s) 893, 1291, 1417, 2595
BstYI RGATCY 4 cut(s) 893, 1291, 1417, 2595
Bsu36I CCTNAGG 1 cut(s) 1287
BsuRI GGCC 8 cut(s) 141, 373, 729, 1009, 1015, 1126, 1491, 3329
BtgI CCRYGG 3 cut(s) 921, 1147, 2608
BtsI GCAGTG 4 cut(s) 291, 1221, 1752, 2069
BtsIMutI CAGTG 7 cut(s) 291, 1221, 1485, 1752, 2069, 2641, 2996
BveI ACCTGC 3 cut(s) 970, 1101, 2921
Cac8I GCNNGC 8 cut(s) 12, 102, 112, 339, 945, 1128, 1192, 2884
CaiI CAGNNNCTG 1 cut(s) 344
CfoI GCGC 2 cut(s) 157, 703
Cfr13I GGNCC 4 cut(s) 139, 233, 1013, 1786
CseI GACGC 1 cut(s) 554
Csp6I GTAC 7 cut(s) 259, 1070, 1135, 1606, 1815, 3196, 3316
CviQI GTAC 7 cut(s) 259, 1070, 1135, 1606, 1815, 3196, 3316
DraI TTTAAA 1 cut(s) 1102
DraIII CACNNNGTG 1 cut(s) 2645
EaeI YGGCCR 2 cut(s) 371, 727
Eam1104I CTCTTC 2 cut(s) 854, 1361
EarI CTCTTC 2 cut(s) 854, 1361
EciI GGCGGA 1 cut(s) 1272
Eco130I CCWWGG 5 cut(s) 217, 1147, 1651, 2608, 3330
Eco147I AGGCCT 1 cut(s) 3329
Eco32I GATATC 1 cut(s) 2575
Eco47I GGWCC 2 cut(s) 233, 1786
Eco57I CTGAAG 3 cut(s) 1398, 1407, 1622
Eco81I CCTNAGG 1 cut(s) 1287
Eco88I CYCGRG 1 cut(s) 2259
EcoNI CCTNNNNNAGG 1 cut(s) 1589
EcoRI GAATTC 2 cut(s) 1777, 2509
EcoRII CCWGG 3 cut(s) 666, 1009, 3214
EcoRV GATATC 1 cut(s) 2575
EcoT14I CCWWGG 5 cut(s) 217, 1147, 1651, 2608, 3330
EcoT22I ATGCAT 3 cut(s) 726, 2422, 2956
ErhI CCWWGG 5 cut(s) 217, 1147, 1651, 2608, 3330
FalI AAGNNNNNCTT 2 cut(s) 2124, 2156
FaqI GGGAC 1 cut(s) 1233
FauI CCCGC 1 cut(s) 814
FauNDI CATATG 2 cut(s) 1117, 2422
FbaI TGATCA 1 cut(s) 3346
FblI GTMKAC 2 cut(s) 127, 3075
FspBI CTAG 7 cut(s) 218, 278, 314, 354, 653, 2883, 3185
GlaI GCGC 2 cut(s) 156, 702
GsaI CCCAGC 1 cut(s) 1134
GsuI CTGGAG 1 cut(s) 345
HaeIII GGCC 8 cut(s) 141, 373, 729, 1009, 1015, 1126, 1491, 3329
HapII CCGG 6 cut(s) 142, 1488, 1818, 2402, 2857, 3144
HgaI GACGC 1 cut(s) 554
HhaI GCGC 2 cut(s) 157, 703
Hin6I GCGC 2 cut(s) 155, 701
HinP1I GCGC 2 cut(s) 155, 701
HincII GTYRAC 1 cut(s) 2997
HindII GTYRAC 1 cut(s) 2997
HindIII AAGCTT 4 cut(s) 408, 515, 1317, 2744
HpaII CCGG 6 cut(s) 142, 1488, 1818, 2402, 2857, 3144
HphI GGTGA 2 cut(s) 2338, 2965
HpyCH4III ACNGT 8 cut(s) 602, 922, 1480, 1691, 1953, 2645, 2790, 3320
HpyCH4IV ACGT 3 cut(s) 1497, 1911, 2631
HpyF10VI GCNNNNNNNGC 8 cut(s) 287, 416, 668, 932, 1196, 2178, 2452, 3087
HpySE526I ACGT 3 cut(s) 1497, 1911, 2631
HspAI GCGC 2 cut(s) 155, 701
KpnI GGTACC 1 cut(s) 1818
Ksp22I TGATCA 1 cut(s) 3346
LmnI GCTCC 3 cut(s) 7, 2137, 2858
LweI GCATC 7 cut(s) 40, 324, 370, 1492, 1495, 2181, 2897
MaeI CTAG 7 cut(s) 218, 278, 314, 354, 653, 2883, 3185
MaeII ACGT 3 cut(s) 1497, 1911, 2631
MaeIII GTNAC 4 cut(s) 493, 793, 2077, 3163
MfeI CAATTG 1 cut(s) 2550
MflI RGATCY 4 cut(s) 893, 1291, 1417, 2595
MhlI GDGCHC 3 cut(s) 1262, 1572, 2631
MlsI TGGCCA 1 cut(s) 729
MluNI TGGCCA 1 cut(s) 729
MlyI GAGTC 4 cut(s) 1460, 2099, 3160, 3290
MmeI TCCRAC 5 cut(s) 760, 1831, 2542, 2629, 3081
Mox20I TGGCCA 1 cut(s) 729
Mph1103I ATGCAT 3 cut(s) 726, 2422, 2956
MscI TGGCCA 1 cut(s) 729
MslI CAYNNNNRTG 2 cut(s) 1120, 2624
Msp20I TGGCCA 1 cut(s) 729
MspA1I CMGCKG 3 cut(s) 821, 906, 1565
MspCI CTTAAG 2 cut(s) 2165, 2233
MspI CCGG 6 cut(s) 142, 1488, 1818, 2402, 2857, 3144
MspR9I CCNGG 5 cut(s) 668, 1011, 1488, 2857, 3216
MunI CAATTG 1 cut(s) 2550
Mva1269I GAATGC 5 cut(s) 325, 441, 698, 2954, 3256
MvaI CCWGG 3 cut(s) 668, 1011, 3216
MvnI CGCG 2 cut(s) 464, 3011
MwoI GCNNNNNNNGC 8 cut(s) 287, 416, 668, 932, 1196, 2178, 2452, 3087
NciI CCSGG 2 cut(s) 1488, 2857
NcoI CCATGG 2 cut(s) 1147, 2608
NdeI CATATG 2 cut(s) 1117, 2422
NheI GCTAGC 1 cut(s) 2882
NlaIV GGNNCC 6 cut(s) 1142, 1183, 1261, 1293, 1816, 2861
NmuCI GTSAC 2 cut(s) 793, 3163
NsiI ATGCAT 3 cut(s) 726, 2422, 2956
NspI RCATGY 4 cut(s) 427, 724, 1862, 2078
NspV TTCGAA 2 cut(s) 999, 2085
OliI CACNNNNGTG 1 cut(s) 2624
PaeR7I CTCGAG 1 cut(s) 2259
PaqCI CACCTGC 2 cut(s) 970, 2921
PceI AGGCCT 1 cut(s) 3329
PciI ACATGT 1 cut(s) 1858
PctI GAATGC 5 cut(s) 325, 441, 698, 2954, 3256
PflFI GACNNNGTC 1 cut(s) 2465
PflMI CCANNNNNTGG 2 cut(s) 242, 956
PleI GAGTC 4 cut(s) 1460, 2099, 3160, 3289
PpsI GAGTC 4 cut(s) 1460, 2099, 3160, 3289
Ppu21I YACGTR 2 cut(s) 1498, 2632
PscI ACATGT 1 cut(s) 1858
PshAI GACNNNNGTC 1 cut(s) 1653
PshBI ATTAAT 1 cut(s) 2589
PsiI TTATAA 1 cut(s) 621
Psp6I CCWGG 3 cut(s) 666, 1009, 3214
PspFI CCCAGC 1 cut(s) 1130
PspGI CCWGG 3 cut(s) 666, 1009, 3214
PspN4I GGNNCC 6 cut(s) 1142, 1183, 1261, 1293, 1816, 2861
PspPI GGNCC 4 cut(s) 139, 233, 1013, 1786
PspXI VCTCGAGB 1 cut(s) 2259
PstI CTGCAG 2 cut(s) 421, 1564
PstNI CAGNNNCTG 1 cut(s) 344
PsuI RGATCY 4 cut(s) 893, 1291, 1417, 2595
PsyI GACNNNGTC 1 cut(s) 2465
PvuII CAGCTG 2 cut(s) 906, 1565
RsaI GTAC 7 cut(s) 260, 1071, 1136, 1607, 1816, 3197, 3317
RsaNI GTAC 7 cut(s) 259, 1070, 1135, 1606, 1815, 3196, 3316
RseI CAYNNNNRTG 2 cut(s) 1120, 2624
Sau96I GGNCC 4 cut(s) 139, 233, 1013, 1786
SchI GAGTC 4 cut(s) 1460, 2099, 3160, 3290
ScrFI CCNGG 5 cut(s) 668, 1011, 1488, 2857, 3216
SduI GDGCHC 3 cut(s) 1262, 1572, 2631
SfaNI GCATC 7 cut(s) 40, 324, 370, 1492, 1495, 2181, 2897
SfcI CTRYAG 2 cut(s) 417, 1560
Sfr274I CTCGAG 1 cut(s) 2259
SfuI TTCGAA 2 cut(s) 999, 2085
SinI GGWCC 2 cut(s) 233, 1786
SlaI CTCGAG 1 cut(s) 2259
SmiMI CAYNNNNRTG 2 cut(s) 1120, 2624
SmlI CTYRAG 4 cut(s) 2006, 2165, 2233, 2259
SmoI CTYRAG 4 cut(s) 2006, 2165, 2233, 2259
SpeI ACTAGT 1 cut(s) 313
SseBI AGGCCT 1 cut(s) 3329
SsiI CCGC 4 cut(s) 462, 821, 1283, 2863
SspI AATATT 2 cut(s) 3353, 3375
SspMI CTAG 7 cut(s) 218, 278, 314, 354, 653, 2883, 3185
StuI AGGCCT 1 cut(s) 3329
StyD4I CCNGG 5 cut(s) 666, 1009, 1486, 2855, 3214
StyI CCWWGG 5 cut(s) 217, 1147, 1651, 2608, 3330
TaaI ACNGT 8 cut(s) 602, 922, 1480, 1691, 1953, 2645, 2790, 3320
TaiI ACGT 3 cut(s) 1500, 1914, 2634
TaqI TCGA 8 cut(s) 635, 999, 1671, 2085, 2150, 2260, 2513, 2896
TatI WGTACW 4 cut(s) 1069, 1605, 3195, 3315
TscAI CASTG 7 cut(s) 291, 1221, 1485, 1759, 2076, 2648, 2996
TseFI GTSAC 2 cut(s) 793, 3163
Tsp45I GTSAC 2 cut(s) 793, 3163
TspRI CASTG 7 cut(s) 291, 1221, 1485, 1759, 2076, 2648, 2996
Tth111I GACNNNGTC 1 cut(s) 2465
Van91I CCANNNNNTGG 2 cut(s) 242, 956
Vha464I CTTAAG 2 cut(s) 2165, 2233
VneI GTGCAC 1 cut(s) 2627
VpaK11BI GGWCC 2 cut(s) 233, 1786
VspI ATTAAT 1 cut(s) 2589
XagI CCTNNNNNAGG 1 cut(s) 1589
XapI RAATTY 6 cut(s) 468, 526, 1777, 1915, 2509, 2567
XceI RCATGY 4 cut(s) 427, 724, 1862, 2078
XcmI CCANNNNNNNNNTGG 1 cut(s) 2049
XhoI CTCGAG 1 cut(s) 2259
XmaJI CCTAGG 1 cut(s) 217
XmiI GTMKAC 2 cut(s) 127, 3075
XspI CTAG 7 cut(s) 218, 278, 314, 354, 653, 2883, 3185
Zsp2I ATGCAT 3 cut(s) 726, 2422, 2956
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.