Rroxscaffold_6G00407010

GMC oxidoreductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0003277
Physical Location & Seq
Forward (+)
29535739 .. 29539982
4244 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00407010.1

Sequence Viewer

Length: 2643 bp
ATGAGAGGACTGAAACTTTCAGAAGCACTTGGATCTGGATTCAGCTGTAATGGGAACACTGTGGCTTATCTCGCTGGAACGCCAGCACCAATCAATGGTTATGGATTAGACAGAAAGCGGGTGTTCACAACTCCTTTCGAAGAAAGGCCAGGGCCAGCAATTTCTTCATCTTTCACTTCTTCACTCGGTTTTACAATCCAGAGTGCTGTACTTCCAATAGCTTATCCATACCTGCTATTTAAAGGAATCACAACATATGGATGGCCTGCTGGGTACTGGTTCCTCCATGGAATTATAGACAAGATAAGACACATTATAGGTTCCAAATCAAGCCAAGCTATGGTTCTTATTGCAGTGGGACATGATGAAAGTGATGGTAAGATCATATTAGAGAAGGGCAACAAAAAAATCTTCTTTACTCCTCCTCAGGATCCCCTTCTCCCACGAAAGATTAAAGCTTTTCAGAAGCTCACTAAGAAACTAGGAGGACTTCTTTTCATGTCAAAATACCGAAGCACAGCAGTTCATCTTTTAGGTGGGTGCAATGTGTCATCAGATCCTTCAGGTGGTGTTTGCAACCCCAATGGACAGGTTTTTGAACCAGACTCATCCACAACGGTGCATCCCGGCCTCTACGTGTGTGATGCTTCTTTGATCCCATGTTCTGTTGGGATAAATCCATCTCTTACCGTCACAACTGCAGCTGAGCACATAAGTAAGAACCTTGTGCAGGAAGCTCTGAAGTACAAGAGCAGCAATGGTCTTGAATGTGTGGTGAAAACAGCTGACCAACGTCAAGAACCCTTCATCGAGAAGAATGTTATTAACTGTCAGAGAGAAATGGTCATGGCTAAAGAAACCATGAAAGGTTATGTTGGGGGTATGCCATGCACTGCTTATCTAAAAATGAGGATGAATTCTCAGGACCAGACTTTCTCTGATGTAAAGTTGGGTACCGGAAAATCCCATCCTCTTCTTAAAGGTAAAGTTGGAGGGCATGTGGAAATTAGAGCCTTTGAGAAGGATGATTTACATATCATAGATGGGAACGTAAATTTGTGTGCAGTTGATGACAGAACTCCATACACACAGTATATGCAGTATGATTTTCTTCTTGCAGCTTCTACTGGTTCAAGATATATTCTCAAGGGAAGAAAGATAATGAATCCATATTTCTTTCCATTATATGCTTGGAGAGAGATGACAACACTGCATGTTACATTCGAAAAAGTTTTTGAGGAAGACTCAAAGGATGAGAAGGTGGTTCTCAAAGGGGAGCTTCATATTTCGATGACAGAGCTTCTTAAGAGCATCATAAGGCTTCAAGGAAAAAATAGAGGAAGGTTTATGTGCCTCCTCTCAGGGTCTTTCTTAAGAACTTATTTCTTGCCAATACCACGAGGGAATCAGGGTGATTTAGTTCTGTCAGAAGATAGACCTTATCCAGGCAGCACTCTCCATGAAATAAAAGCAGAAGATGGATTCACCATCAGTTGCAGACAATGGAAGTCAAAACTTAAAGGAGATGAGAAACTGAATCCGGTTCTCCTTCTTAATGCATATGCTATTGAGAGTTTCTGGCTGCCAACTGAGCCGAATGACTTGGTCAGAACTTTAATTGAAGAAGGGCATGAAACATGGTTATTGAATTCGAGATTGCACCCTCTGAATCCTTCTAACGATTTTACAATTGAAGATGTTGGAAAATTTGATATCCCTGCTGCAATTAATAAGATACTTGAAATCCATGGACCAAGCACAAAGGTGCATGTAGTTGCACACTGTGTTGGAGGCTCAGCCATACACATAGCTATCATGGGAGGTCATGTCTCTGCAACCCATATAGCTTCTCTGTCTTGCACCAACTCATCAATGTTCTTCAAGCTTAATGCTATGTCCACATTCAAAATGTGGCTTCCTCTGATACCGTTGTCAATGTTCATACTTGGAAACGACAAGACACTTCCTCTTTTGGAAACATCAAATACCAGCTCCCGGCACCGCCTCCTGAAACTGATAGCTAGCTTCATACCTCGGACTGAGAGATGCACCTGCTTTGAATGTGAAGTTTTCTCTGGCGTATTTGGAAATGCATTCTGGCATGAAAATATCACCCCAACCTTGCACCAGTGGTTGACCAAGAAAAACACGACAAGGCTTCCTATGGCAGCATTTCCCCATCTCAGAAAGATGTCCAACTCTGGTTTTATTGTAGACAGCAAGGGTTGCAACTCATATTTGATCCATCCAGAAAGAATGGCACTCCCAACGCTCTATATATCTGGTGGGCGATCTCTCCTTGTGACTCCTCAAACTTCTTTTCTAGCTCATAAGTACATGAAGTTGCACCAGCCAGGGTTTAGACATGAAAGGGTAGTTGTAGAGGGTTTTGGGCATTCAGATTTATTGATTGGAGAAGAGTCCCACAAGAAGGTGTTTCCTCACATTTTATCTCATATAAGATTAGCTGAACAAGGGGAGATTCATGCCAAAGGAAAGAAGTACAGTAAAGAGGCCTTGGATCGGGAAGATGATCAATATTATGAAGGCAACTTTGGAATATTTGGAACTTGGTTCTCTCCTTTTGTGGTTATCATGTGGCTGTTTATCTCACTTTCTTGGTTGGTGGCAGTATTTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GMC_oxred_C GMC_oxred_N

Protein Analysis

880

Amino Acids

98.35

Weight (kDa)

8.91

Isoelectric Point (pI)

38.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GMC_oxred_C PF05199 166 - 235 4.6e-10 GMC oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2060
Acc36I ACCTGC 2 cut(s) 240, 2060
Acc65I GGTACC 1 cut(s) 953
AccB1I GGYRCC 2 cut(s) 953, 1998
AccB7I CCANNNNNTGG 2 cut(s) 95, 340
AccI GTMKAC 1 cut(s) 2214
AciI CCGC 2 cut(s) 118, 2002
AclWI GGATC 7 cut(s) 40, 425, 438, 551, 649, 2236, 2529
AcsI RAATTY 4 cut(s) 916, 1054, 1648, 1706
AcuI CTGAAG 2 cut(s) 546, 761
AdeI CACNNNGTG 1 cut(s) 1784
AfaI GTAC 6 cut(s) 210, 275, 746, 955, 2336, 2504
AfiI CCNNNNNNNGG 8 cut(s) 95, 340, 566, 730, 1445, 1995, 2431, 2523
AflII CTTAAG 2 cut(s) 1304, 1372
AflIII ACRYGT 1 cut(s) 636
AjnI CCWGG 3 cut(s) 148, 1444, 2353
AjuI GAANNNNNNNTTGG 4 cut(s) 327, 359, 2538, 2570
AleI CACNNNNGTG 2 cut(s) 617, 1763
Alw21I GWGCWC 1 cut(s) 711
Alw26I GTCTC 1 cut(s) 1834
AlwI GGATC 7 cut(s) 40, 425, 438, 551, 649, 2236, 2529
AoxI GGCC 5 cut(s) 146, 152, 263, 628, 2514
ApeKI GCWGC 7 cut(s) 701, 753, 1118, 1449, 1582, 1721, 2168
ApoI RAATTY 4 cut(s) 916, 1054, 1648, 1706
AseI ATTAAT 1 cut(s) 1728
Asp718I GGTACC 1 cut(s) 953
AspS9I GGNCC 3 cut(s) 152, 925, 1751
AsuC2I CCSGG 2 cut(s) 627, 1996
AsuHPI GGTGA 4 cut(s) 787, 1424, 1477, 2104
AsuII TTCGAA 2 cut(s) 138, 1224
AsuNHI GCTAGC 1 cut(s) 2021
AvaII GGWCC 2 cut(s) 925, 1751
AxyI CCTNAGG 1 cut(s) 426
BaeI ACNNNNGTAYC 2 cut(s) 1916, 1949
BamHI GGATCC 1 cut(s) 430
BanI GGYRCC 2 cut(s) 953, 1998
BauI CACGAG 1 cut(s) 1398
BbsI GAAGAC 1 cut(s) 1248
Bbv12I GWGCWC 1 cut(s) 711
BbvI GCAGC 7 cut(s) 713, 765, 1130, 1461, 1569, 1708, 2180
BccI CCATC 9 cut(s) 255, 368, 688, 975, 1037, 1472, 1496, 2187, 2253
BciT130I CCWGG 3 cut(s) 150, 1446, 2355
BclI TGATCA 1 cut(s) 2533
BcnI CCSGG 2 cut(s) 627, 1996
BcoDI GTCTC 1 cut(s) 1834
BfaI CTAG 3 cut(s) 482, 2022, 2324
BfmI CTRYAG 1 cut(s) 699
BfrI CTTAAG 2 cut(s) 1304, 1372
BfuAI ACCTGC 2 cut(s) 240, 2060
BisI GCNGC 7 cut(s) 702, 754, 1119, 1450, 1583, 1722, 2169
BlpI GCTNAGC 2 cut(s) 705, 1795
BlsI GCNGC 7 cut(s) 703, 755, 1120, 1451, 1584, 1723, 2170
Bme1390I CCNGG 5 cut(s) 150, 627, 1446, 1996, 2355
Bme18I GGWCC 2 cut(s) 925, 1751
BmgT120I GGNCC 3 cut(s) 152, 925, 1751
BmiI GGNNCC 5 cut(s) 281, 322, 432, 955, 2000
BmrFI CCNGG 5 cut(s) 150, 627, 1446, 1996, 2355
BmsI GCATC 4 cut(s) 631, 634, 1320, 2036
BmtI GCTAGC 1 cut(s) 2025
BoxI GACNNNNGTC 1 cut(s) 792
BpiI GAAGAC 1 cut(s) 1248
BplI GAGNNNNNCTC 2 cut(s) 1229, 1261
Bpu1102I GCTNAGC 2 cut(s) 705, 1795
Bpu14I TTCGAA 2 cut(s) 138, 1224
BpuEI CTTGAG 1 cut(s) 1130
BpuMI CCSGG 2 cut(s) 627, 1996
BsaAI YACGTR 1 cut(s) 637
BsaJI CCNNGG 6 cut(s) 149, 286, 1747, 2033, 2354, 2517
BsaWI WCCGGW 2 cut(s) 956, 1540
BsaXI ACNNNNNCTCC 4 cut(s) 984, 1014, 1812, 1842
Bsc4I CCNNNNNNNGG 8 cut(s) 95, 340, 566, 730, 1445, 1995, 2431, 2523
Bse1I ACTGG 3 cut(s) 281, 1132, 2128
Bse21I CCTNAGG 1 cut(s) 426
Bse3DI GCAATG 2 cut(s) 550, 763
BseBI CCWGG 3 cut(s) 150, 1446, 2355
BseDI CCNNGG 6 cut(s) 149, 286, 1747, 2033, 2354, 2517
BseGI GGATG 8 cut(s) 266, 608, 622, 918, 967, 1030, 1258, 2245
BseLI CCNNNNNNNGG 8 cut(s) 95, 340, 566, 730, 1445, 1995, 2431, 2523
BseMI GCAATG 2 cut(s) 550, 763
BseMII CTCAG 8 cut(s) 440, 696, 935, 1374, 1581, 1809, 2031, 2197
BseNI ACTGG 3 cut(s) 281, 1132, 2128
BseRI GAGGAG 4 cut(s) 411, 414, 1346, 2298
BseXI GCAGC 7 cut(s) 713, 765, 1130, 1461, 1569, 1708, 2180
BseYI CCCAGC 1 cut(s) 269
BsgI GTGCAG 2 cut(s) 749, 1083
BshFI GGCC 5 cut(s) 148, 154, 265, 630, 2516
BshNI GGYRCC 2 cut(s) 953, 1998
BsiHKAI GWGCWC 1 cut(s) 711
BsiSI CCGG 4 cut(s) 627, 957, 1541, 1996
BslFI GGGAC 2 cut(s) 372, 2407
BslI CCNNNNNNNGG 8 cut(s) 95, 340, 566, 730, 1445, 1995, 2431, 2523
BsmAI GTCTC 1 cut(s) 1834
BsmFI GGGAC 2 cut(s) 372, 2407
BsmI GAATGC 2 cut(s) 2093, 2395
BsnI GGCC 5 cut(s) 148, 154, 265, 630, 2516
Bsp119I TTCGAA 2 cut(s) 138, 1224
Bsp1286I GDGCHC 1 cut(s) 711
Bsp143I GATC 9 cut(s) 32, 381, 430, 556, 654, 2241, 2291, 2521, 2533
Bsp1720I GCTNAGC 2 cut(s) 705, 1795
Bsp19I CCATGG 2 cut(s) 286, 1747
BspACI CCGC 2 cut(s) 118, 2002
BspANI GGCC 5 cut(s) 148, 154, 265, 630, 2516
BspCNI CTCAG 8 cut(s) 439, 697, 934, 1373, 1582, 1808, 2032, 2196
BspLI GGNNCC 5 cut(s) 281, 322, 432, 955, 2000
BspMAI CTGCAG 1 cut(s) 703
BspMI ACCTGC 2 cut(s) 240, 2060
BspOI GCTAGC 1 cut(s) 2025
BspPI GGATC 7 cut(s) 40, 425, 438, 551, 649, 2236, 2529
BspT104I TTCGAA 2 cut(s) 138, 1224
BspT107I GGYRCC 2 cut(s) 953, 1998
BspTI CTTAAG 2 cut(s) 1304, 1372
BsrDI GCAATG 2 cut(s) 550, 763
BsrI ACTGG 3 cut(s) 281, 1132, 2128
BssECI CCNNGG 6 cut(s) 149, 286, 1747, 2033, 2354, 2517
BssMI GATC 9 cut(s) 32, 381, 430, 556, 654, 2241, 2291, 2521, 2533
BssSI CACGAG 1 cut(s) 1398
BssT1I CCWWGG 3 cut(s) 286, 1747, 2517
Bst2BI CACGAG 1 cut(s) 1398
Bst2UI CCWGG 3 cut(s) 150, 1446, 2355
Bst4CI ACNGT 8 cut(s) 61, 619, 691, 830, 1092, 1784, 1929, 2507
Bst6I CTCTTC 2 cut(s) 978, 2412
BstAFI CTTAAG 2 cut(s) 1304, 1372
BstAPI GCANNNNNTGC 1 cut(s) 2226
BstBAI YACGTR 1 cut(s) 637
BstBI TTCGAA 2 cut(s) 138, 1224
BstC8I GCNNGC 4 cut(s) 84, 156, 267, 2023
BstDEI CTNAG 9 cut(s) 426, 474, 705, 921, 1360, 1590, 1795, 2040, 2183
BstDSI CCRYGG 2 cut(s) 286, 1747
BstENI CCTNNNNNAGG 2 cut(s) 728, 1443
BstF5I GGATG 8 cut(s) 266, 608, 622, 918, 967, 1030, 1258, 2245
BstKTI GATC 9 cut(s) 35, 384, 433, 559, 657, 2244, 2294, 2524, 2536
BstMAI GTCTC 1 cut(s) 1834
BstMBI GATC 9 cut(s) 32, 381, 430, 556, 654, 2241, 2291, 2521, 2533
BstMWI GCNNNNNNNGC 3 cut(s) 71, 1591, 2226
BstNI CCWGG 3 cut(s) 150, 1446, 2355
BstNSI RCATGY 3 cut(s) 1001, 1217, 1772
BstPAI GACNNNNGTC 1 cut(s) 792
BstSCI CCNGG 5 cut(s) 148, 625, 1444, 1994, 2353
BstSFI CTRYAG 1 cut(s) 699
BstV1I GCAGC 7 cut(s) 713, 765, 1130, 1461, 1569, 1708, 2180
BstV2I GAAGAC 1 cut(s) 1248
BstX2I RGATCY 3 cut(s) 32, 430, 556
BstYI RGATCY 3 cut(s) 32, 430, 556
Bsu36I CCTNAGG 1 cut(s) 426
BsuRI GGCC 5 cut(s) 148, 154, 265, 630, 2516
BtgI CCRYGG 2 cut(s) 286, 1747
BtsCI GGATG 8 cut(s) 266, 608, 622, 918, 967, 1030, 1258, 2245
BtsI GCAGTG 3 cut(s) 360, 891, 1208
BtsIMutI CAGTG 6 cut(s) 57, 360, 891, 1208, 1780, 2135
BveI ACCTGC 2 cut(s) 240, 2060
Cac8I GCNNGC 4 cut(s) 84, 156, 267, 2023
Cfr13I GGNCC 3 cut(s) 152, 925, 1751
Csp6I GTAC 6 cut(s) 209, 274, 745, 954, 2335, 2503
CviQI GTAC 6 cut(s) 209, 274, 745, 954, 2335, 2503
DdeI CTNAG 9 cut(s) 426, 474, 705, 921, 1360, 1590, 1795, 2040, 2183
DpnI GATC 9 cut(s) 34, 383, 432, 558, 656, 2243, 2293, 2523, 2535
DpnII GATC 9 cut(s) 32, 381, 430, 556, 654, 2241, 2291, 2521, 2533
DraI TTTAAA 1 cut(s) 241
DraIII CACNNNGTG 1 cut(s) 1784
Eam1104I CTCTTC 2 cut(s) 978, 2412
EarI CTCTTC 2 cut(s) 978, 2412
Eco130I CCWWGG 3 cut(s) 286, 1747, 2517
Eco147I AGGCCT 1 cut(s) 2516
Eco32I GATATC 1 cut(s) 1714
Eco47I GGWCC 2 cut(s) 925, 1751
Eco57I CTGAAG 2 cut(s) 546, 761
Eco81I CCTNAGG 1 cut(s) 426
EcoNI CCTNNNNNAGG 2 cut(s) 728, 1443
EcoRI GAATTC 2 cut(s) 916, 1648
EcoRII CCWGG 3 cut(s) 148, 1444, 2353
EcoRV GATATC 1 cut(s) 1714
EcoT14I CCWWGG 3 cut(s) 286, 1747, 2517
EcoT22I ATGCAT 2 cut(s) 1561, 2095
ErhI CCWWGG 3 cut(s) 286, 1747, 2517
FalI AAGNNNNNCTT 2 cut(s) 1263, 1295
FaqI GGGAC 2 cut(s) 372, 2407
FauI CCCGC 1 cut(s) 111
FauNDI CATATG 2 cut(s) 256, 1561
FbaI TGATCA 1 cut(s) 2533
FblI GTMKAC 1 cut(s) 2214
Fnu4HI GCNGC 7 cut(s) 702, 754, 1119, 1450, 1583, 1722, 2169
FokI GGATG 8 cut(s) 273, 595, 609, 925, 954, 1037, 1265, 2232
Fsp4HI GCNGC 7 cut(s) 702, 754, 1119, 1450, 1583, 1722, 2169
FspBI CTAG 3 cut(s) 482, 2022, 2324
GluI GCNGC 7 cut(s) 702, 754, 1119, 1450, 1583, 1722, 2169
GsaI CCCAGC 1 cut(s) 273
HaeIII GGCC 5 cut(s) 148, 154, 265, 630, 2516
HapII CCGG 4 cut(s) 627, 957, 1541, 1996
HincII GTYRAC 1 cut(s) 2136
HindII GTYRAC 1 cut(s) 2136
HindIII AAGCTT 2 cut(s) 456, 1883
HpaII CCGG 4 cut(s) 627, 957, 1541, 1996
HphI GGTGA 4 cut(s) 787, 1424, 1477, 2104
Hpy166II GTNNAC 4 cut(s) 126, 1899, 2136, 2215
Hpy8I GTNNAC 4 cut(s) 126, 1899, 2136, 2215
HpyCH4III ACNGT 8 cut(s) 61, 619, 691, 830, 1092, 1784, 1929, 2507
HpyCH4IV ACGT 3 cut(s) 636, 793, 1050
HpyF10VI GCNNNNNNNGC 3 cut(s) 71, 1591, 2226
HpyF3I CTNAG 9 cut(s) 426, 474, 705, 921, 1360, 1590, 1795, 2040, 2183
HpySE526I ACGT 3 cut(s) 636, 793, 1050
KpnI GGTACC 1 cut(s) 957
Ksp22I TGATCA 1 cut(s) 2533
Kzo9I GATC 9 cut(s) 32, 381, 430, 556, 654, 2241, 2291, 2521, 2533
LmnI GCTCC 2 cut(s) 1276, 1997
Lsp1109I GCAGC 7 cut(s) 713, 765, 1130, 1461, 1569, 1708, 2180
LweI GCATC 4 cut(s) 631, 634, 1320, 2036
MaeI CTAG 3 cut(s) 482, 2022, 2324
MaeII ACGT 3 cut(s) 636, 793, 1050
MaeIII GTNAC 3 cut(s) 691, 1216, 2302
MalI GATC 9 cut(s) 34, 383, 432, 558, 656, 2243, 2293, 2523, 2535
MboI GATC 9 cut(s) 32, 381, 430, 556, 654, 2241, 2291, 2521, 2533
MfeI CAATTG 1 cut(s) 1689
MflI RGATCY 3 cut(s) 32, 430, 556
MhlI GDGCHC 1 cut(s) 711
MlyI GAGTC 4 cut(s) 599, 1238, 2299, 2429
MmeI TCCRAC 4 cut(s) 970, 1681, 1768, 2220
Mph1103I ATGCAT 2 cut(s) 1561, 2095
MslI CAYNNNNRTG 3 cut(s) 259, 617, 1763
MspA1I CMGCKG 3 cut(s) 45, 704, 785
MspCI CTTAAG 2 cut(s) 1304, 1372
MspI CCGG 4 cut(s) 627, 957, 1541, 1996
MspR9I CCNGG 5 cut(s) 150, 627, 1446, 1996, 2355
MunI CAATTG 1 cut(s) 1689
Mva1269I GAATGC 2 cut(s) 2093, 2395
MvaI CCWGG 3 cut(s) 150, 1446, 2355
MwoI GCNNNNNNNGC 3 cut(s) 71, 1591, 2226
NciI CCSGG 2 cut(s) 627, 1996
NcoI CCATGG 2 cut(s) 286, 1747
NdeI CATATG 2 cut(s) 256, 1561
NdeII GATC 9 cut(s) 32, 381, 430, 556, 654, 2241, 2291, 2521, 2533
NheI GCTAGC 1 cut(s) 2021
NlaIV GGNNCC 5 cut(s) 281, 322, 432, 955, 2000
NmuCI GTSAC 2 cut(s) 691, 2302
NsiI ATGCAT 2 cut(s) 1561, 2095
NspI RCATGY 3 cut(s) 1001, 1217, 1772
NspV TTCGAA 2 cut(s) 138, 1224
OliI CACNNNNGTG 2 cut(s) 617, 1763
PaqCI CACCTGC 1 cut(s) 2060
PceI AGGCCT 1 cut(s) 2516
PctI GAATGC 2 cut(s) 2093, 2395
PfeI GAWTC 8 cut(s) 39, 246, 1165, 1405, 1482, 1537, 1669, 2482
PflFI GACNNNGTC 1 cut(s) 1604
PflMI CCANNNNNTGG 2 cut(s) 95, 340
PkrI GCNGC 7 cut(s) 703, 755, 1120, 1451, 1584, 1723, 2170
PleI GAGTC 4 cut(s) 599, 1238, 2299, 2428
PpsI GAGTC 4 cut(s) 599, 1238, 2299, 2428
Ppu21I YACGTR 1 cut(s) 637
PshAI GACNNNNGTC 1 cut(s) 792
PshBI ATTAAT 1 cut(s) 1728
Psp6I CCWGG 3 cut(s) 148, 1444, 2353
PspFI CCCAGC 1 cut(s) 269
PspGI CCWGG 3 cut(s) 148, 1444, 2353
PspN4I GGNNCC 5 cut(s) 281, 322, 432, 955, 2000
PspPI GGNCC 3 cut(s) 152, 925, 1751
PstI CTGCAG 1 cut(s) 703
PsuI RGATCY 3 cut(s) 32, 430, 556
PsyI GACNNNGTC 1 cut(s) 1604
PvuII CAGCTG 3 cut(s) 45, 704, 785
RsaI GTAC 6 cut(s) 210, 275, 746, 955, 2336, 2504
RsaNI GTAC 6 cut(s) 209, 274, 745, 954, 2335, 2503
RseI CAYNNNNRTG 3 cut(s) 259, 617, 1763
SatI GCNGC 7 cut(s) 702, 754, 1119, 1450, 1583, 1722, 2169
Sau3AI GATC 9 cut(s) 32, 381, 430, 556, 654, 2241, 2291, 2521, 2533
Sau96I GGNCC 3 cut(s) 152, 925, 1751
SchI GAGTC 4 cut(s) 599, 1238, 2299, 2429
ScrFI CCNGG 5 cut(s) 150, 627, 1446, 1996, 2355
SduI GDGCHC 1 cut(s) 711
SfaNI GCATC 4 cut(s) 631, 634, 1320, 2036
SfcI CTRYAG 1 cut(s) 699
SfuI TTCGAA 2 cut(s) 138, 1224
SinI GGWCC 2 cut(s) 925, 1751
SmiMI CAYNNNNRTG 3 cut(s) 259, 617, 1763
SmlI CTYRAG 3 cut(s) 1145, 1304, 1372
SmoI CTYRAG 3 cut(s) 1145, 1304, 1372
SseBI AGGCCT 1 cut(s) 2516
SsiI CCGC 2 cut(s) 118, 2002
SspI AATATT 2 cut(s) 2540, 2562
SspMI CTAG 3 cut(s) 482, 2022, 2324
StuI AGGCCT 1 cut(s) 2516
StyD4I CCNGG 5 cut(s) 148, 625, 1444, 1994, 2353
StyI CCWWGG 3 cut(s) 286, 1747, 2517
TaaI ACNGT 8 cut(s) 61, 619, 691, 830, 1092, 1784, 1929, 2507
TaiI ACGT 3 cut(s) 639, 796, 1053
TaqI TCGA 5 cut(s) 138, 810, 1224, 1289, 1652
TatI WGTACW 4 cut(s) 208, 744, 2334, 2502
TfiI GAWTC 8 cut(s) 39, 246, 1165, 1405, 1482, 1537, 1669, 2482
TscAI CASTG 6 cut(s) 64, 360, 898, 1215, 1787, 2135
TseFI GTSAC 2 cut(s) 691, 2302
TseI GCWGC 7 cut(s) 701, 753, 1118, 1449, 1582, 1721, 2168
Tsp45I GTSAC 2 cut(s) 691, 2302
TspRI CASTG 6 cut(s) 64, 360, 898, 1215, 1787, 2135
Tth111I GACNNNGTC 1 cut(s) 1604
Van91I CCANNNNNTGG 2 cut(s) 95, 340
Vha464I CTTAAG 2 cut(s) 1304, 1372
VpaK11BI GGWCC 2 cut(s) 925, 1751
VspI ATTAAT 1 cut(s) 1728
XagI CCTNNNNNAGG 2 cut(s) 728, 1443
XapI RAATTY 4 cut(s) 916, 1054, 1648, 1706
XceI RCATGY 3 cut(s) 1001, 1217, 1772
XcmI CCANNNNNNNNNTGG 1 cut(s) 1188
XmiI GTMKAC 1 cut(s) 2214
XspI CTAG 3 cut(s) 482, 2022, 2324
Zsp2I ATGCAT 2 cut(s) 1561, 2095
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.