Rh3CG216900

GMC oxidoreductase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Reverse (-)
20105126 .. 20116989
11864 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG216900.1

Sequence Viewer

Length: 4092 bp
ATGGAGAAACAAGCAGCTGTCGAAGGAAGTTTTGGTTATGGACAAGAAGATAGTTATGATGCTGTTGTTGTGGGTTCTGGATATGGTGGTTCTGTTGCTGCCTGCCACTTGTCTATGGCAGGGATAAGAGTATGTCTGATTGAGAAGGGCCGGAAATGGGAATCTCAGGATTTTCCAACTGACGTCTCCAAAATCCTGCAGGCTTTTAGGATGGAGAACGAGAACTTAGGCTTTAGCTTTGGACCAAAGGATGCTTTGTTCCAGGTATACGAGCAAAACGATTCTCTAGCAGCAGTGGCTTGTGGGCTTGGTGGAGGTTCACTAGTTAATGCAGGAGTTATGATATCAACACCAGTCCGTGCTAGACGGCATCCAAAATGGCCAAAGGAATGGGAAAGGAATTGGAATAATTGTGAAGCTTCTGCAGCAGCCATGCTGAAAATACAAAGCATACCTGTCAAGTTTCCTTCTGCGAAAATCTTGGAAGAAGTTGCATATGGAGAGCTTGGAGAAACTTTCGAGACGTCAGTTAAGCTGAGTGTGAATTTTGATATCGAAGAACCAATAACCAAGGGAATGAAGTCTCCACAGATGAGTAGCTGCTTAGCCTGTGGGAACTGTCTCTCTGGATGTCCTTACAATGCCAAAAGTTCTACAGACAAAAATTATATACTTTCAGCAATCCAGGGAGGATGCATTGTTAAAACAGAATGTCAAGTGAAGTATGTAGTGAGGAACATGTATGAAAATTTCCCTTGTGAAGGCAAAATTGGCAGGAAAAATAGAAGATGGCGTGTTTACTTTAATGAGATTGACTATATAACCTCTGATTTTGTAATCCTATCAGCTGGAGTTTTTGGGACAACTGAGATACTCTTCCAATCACAGATGAGAGGACTGAAACTTTCAGAAGCTCTTGGGTCTGGATTCAGCTGTAATGGGAATACTGTGGCTTATCTTGCTGGAAGTCCAGCACCATTGGGTGCTTATGGATTAGACAGAAAGCAAGTGTTTAAGACTCCTTTTGAGGAAAGGCCAGGGCCATCCATCTCTTCATCTTACACCTCTTCACTGGGATTTACAATCCAGAGTGCCGTACTTCCGACAGCTTATCCATACCTGCTGTTTAAAGGGATTACAACGTATGGGTGGCCTGCAGGATACTGGTTCTTTCATGGGATTATAGACAAGATAAAACATATTATAGGTTTCAAAGCATGCCAAGCAATGGCCCTTATTGCACTGGGACATGATGAGAGTGATGGTAAGATTACACTAGAAAAGGGAACAAACAAAATCTGCTTCACTCCACCTCATGATCCGCTTCTCCCACGAAAAATTAAAGCTTTTCAAAAGCTGACTAAGAAATTAGGAGGAATTCTCTTTATGGCAAAATACCGAAGTGCATCAGTTCATCATTTAGGAGGGTGCAATGCATCATCAGATCCTTCACATGGTGTTTGCAACCCCGATGGGCAGGTTTTTGACCCAAAGTCACCTGCCACAGTGCATCCCGGCCTGTATGTATGTGATGCTTCTTTGATTCCATGTTCTGTCGGCATAAACCCATCTCTTACTATTGCTACTGCAGCTGAGTATGTAAGTAGGTACCTTGTGCAGGATATTCTCATGTACAAGAACAGAGAAGGCCTTGAATCTGGTCTTAAATCTCCTAATCAAGATCCAGAATCCTTCATTGATAGGAAGGCTATTAATCGCCAGAGATCATCGGTCACGGTTAAAGAAACCATGAGAGGTTATATTGGTGGTATGCCATGCACAGCTTATCTCATAATGAAAATGAACTCTCAGAACCAGACGGGTTCTGCTAAATGGAAGTTGGGTAATGGAAAATCTCATCCCCTTCTAAGAGGGAAAGTTGGAGGGCATGTGGAAATGATAGCTATTGAGAAGGACAATTTACATATCATAGATGGGAATGTTAATTTGTGTGCAGTAGATGACAGAACTCCTTACACACAGTATATGCATTATCGCCTTCTTCTCGTGGCTTCTACTGGTTCAAGATATATTCTAGAGGGAAGAAAGATAATGAACCCTTATCTCTTTCCCGTATATGCTTGGAGGGAAATGACTACACTGCATGTGACATTTGCAAAAGTCGCAGAGAAAAAAAAGGATGAGAAGATGATTTTGAAAGGGGAGCTTAATATTTCCATGATAGAGCTTCTTAAGAGCACTATAAGCTTGGAAGGTAACAATAGAGGAAGGTTCATATGCCTCCTATTAGGGTCTCTCTTAAGAACCTATCTCTTGCAGATACCTCGAGGGAGCCATGAGGATTTAGATCTGTCAGTTTATCACAGGAAGTCTTATCCAAGCAGCACTCTTCATGAAATACAAACAGAAGATGGATTCCTTATCAGTTGCAGACAATGGAAGTCCCACCATATTTTGTCAAAACTCAAAGGAGATGAACAACAAAATCCAGTCCTCCTTCTTAATGGATATTCTACTGAGAGTTATTGGCTGCCAACAGAACCCAATGACTTGGTAAGATCTTTACTCGAAGAAGGGCATGATACATGGCTTTTACAACCAAGATTGCACCCTCTGAATCCTTCAAACAACTTTACGATTGAGGATGTTGCAAGATTTGATATCCCTGCTGCAATTAATAAGATCCTTGAACTTCATGGACCAAGTGCAAAGGTGCATGTAGTTGCACATTGTGTTGGAGGGTTATCCATGCACATCGCAGTCATGGGAGGTCATGTATCTGCAACCCATGTAGCTTCTCTGTCTTGCACTAACTCTTCAATGTTCTTCAACCTTAATGCTTTCGCCAGAGTCAAAATGTGGCTTCCTCTGATCCCAATATCGATGTTCATACTTGGAGAAGACAAAACAGTTCCTCTTTTGGAAGCATCAAACCTCAGCTTGCGGCACCACCTCCTGAGGCTTACAGCCCGCTTCATCCCCCGGTATGAGAGGTGCACCTGCAATGAATGTGAAGTTTTTTCCGGCATGTTCGGAAATACCTTCTGGCACGAAAATATTACCCCCACCATGCATCAGTGGTTGAACAAGCAAAGCTCAACAAGGCTTCCTATGTCGGCATTTCCCCACCTCAGGAAAATATGCAACTCTGGTTTTATTGTAGACAGCAATGGTTGCAGCTCATACTTGATCCATCCAGAAAGAATGGCACTCCCGACCCTATATATATCAGGCGGCCGATCTCTCCTTGTGACTCCTCAGACTTCTTTCCTAGCTCATAAATATATGAAGCTGCACCAGCCTGGCTTTAGACATGAAAGGGTGGTTGTGGAGGGTTTCGGGCATTCAGATCTATTGATTGGAGAGGAGTCTCATAAGAAGGTGTTTCCTCACATTTTATCCCATATTAGATTAGCTGAACAAGGAGAGATTCATACCAAGAGAAACCAGTGCAGTAAAGAGGCATTGGATTGGGAAGCTGATCAGCTCTATGACGGCAGCTTTGGACAATGTGGAACTTGCTCTTTTTGTATCATAGAGGGGCCGGAGACGGTGCAGGACTTTGTTCAGATGCAGCTGCAGGAAATTCAGGACAACATAAGGAGTAGGCGGAACAAGATTTTTCTGCTCATGGAAGAGCTGAGGAGATTGCGGGTGCAACACCGGATAAAGATGGCGAAGGATTTCAATGAGAGTGGTGAGGAAGAGTCCAATGAGATGCCTGACATTCCATCATCCATCCCTTTTCTCCCTTCTGTGACACCAAAGACTTTGAAGCAACTCTACCTCACAAGCGCAACATTTATATCTGGGATAATTGTATTTGGGGGCCTTATTGCACCGACGATGTTAAGTGTCTCAACTTTTTTTCCGTGGCAGCTGGAACTTAAATTAGGCATAGGAGGTACCTCATATGAAGATTTCATTCGCAGCATGCATTTGCCCATGCAATTAAGTCAGGTTGATCCCATTGTGGCATCCTTTTCGGGTGGGGCAGTGGGTGTCATTTCAGCATTGATGTTGATTGAAGCTAACAATGTTGAGCAACAAGAGAAGAAAAGGTGCAAGTATTGCCATGGAACTGGTATGTGCCGATCTGTTTCATATACTAGCATGCTCTTATGGCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1363

Amino Acids

151.92

Weight (kDa)

8.44

Isoelectric Point (pI)

47.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GMC_oxred_N PF00732 20 - 295 1.3e-08 GMC oxidoreductase
GMC_oxred_C PF05199 463 - 531 4.2e-10 GMC oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1507, 2969
AatII GACGTC 2 cut(s) 186, 527
AbsI CCTCGAGG 1 cut(s) 2286
Acc36I ACCTGC 4 cut(s) 1128, 1468, 1507, 2969
Acc65I GGTACC 2 cut(s) 1608, 3866
AccB1I GGYRCC 3 cut(s) 1608, 2907, 3866
AccB7I CCANNNNNTGG 1 cut(s) 1228
AccI GTMKAC 2 cut(s) 267, 3123
AciI CCGC 6 cut(s) 1322, 2905, 2932, 3195, 3571, 3613
AclWI GGATC 7 cut(s) 1313, 1439, 1676, 2638, 2827, 3145, 3920
AcoI YGGCCR 2 cut(s) 380, 3196
AcsI RAATTY 4 cut(s) 544, 748, 1377, 3546
AcyI GRCGYC 2 cut(s) 183, 524
AdeI CACNNNGTG 2 cut(s) 1457, 2693
AfaI GTAC 4 cut(s) 1098, 1610, 1634, 3868
AfiI CCNNNNNNNGG 6 cut(s) 157, 761, 1228, 1454, 1618, 3093
AflII CTTAAG 2 cut(s) 2192, 2260
AflIII ACRYGT 1 cut(s) 738
AhdI GACNNNNNGTC 1 cut(s) 1492
AhlI ACTAGT 1 cut(s) 322
AjnI CCWGG 4 cut(s) 261, 684, 1036, 3262
AjuI GAANNNNNNNTTGG 4 cut(s) 15, 47, 753, 785
AloI GAACNNNNNNTCC 2 cut(s) 242, 274
Alw21I GWGCWC 2 cut(s) 2201, 2960
Alw26I GTCTC 8 cut(s) 190, 515, 588, 626, 2259, 3336, 3503, 3823
Alw44I GTGCAC 1 cut(s) 2956
AlwI GGATC 7 cut(s) 1313, 1439, 1676, 2638, 2827, 3145, 3920
Ama87I CYCGRG 1 cut(s) 2286
ApaLI GTGCAC 1 cut(s) 2956
ApoI RAATTY 4 cut(s) 544, 748, 1377, 3546
ArsI GACNNNNNNTTYG 2 cut(s) 3446, 3478
AseI ATTAAT 2 cut(s) 1713, 2637
Asp700I GAANNNNTTC 1 cut(s) 3644
Asp718I GGTACC 2 cut(s) 1608, 3866
AspLEI GCGC 1 cut(s) 3758
AspS9I GGNCC 7 cut(s) 148, 242, 1040, 1231, 2660, 3503, 3790
AsuC2I CCSGG 2 cut(s) 1515, 2944
AsuHPI GGTGA 2 cut(s) 1488, 3671
AvaI CYCGRG 1 cut(s) 2286
AvaII GGWCC 2 cut(s) 242, 2660
AxyI CCTNAGG 2 cut(s) 2918, 3092
BaeGI GKGCMC 1 cut(s) 2960
BalI TGGCCA 1 cut(s) 382
BanI GGYRCC 3 cut(s) 1608, 2907, 3866
BarI GAAGNNNNNNTAC 2 cut(s) 3728, 3760
BauI CACGAG 1 cut(s) 2006
BbsI GAAGAC 1 cut(s) 2868
Bbv12I GWGCWC 2 cut(s) 2201, 2960
BbvCI CCTCAGC 2 cut(s) 2897, 3602
BceAI ACGGC 3 cut(s) 383, 1079, 3472
BcgI CGANNNNNNTGC 4 cut(s) 2267, 2301, 3927, 3961
BciT130I CCWGG 4 cut(s) 263, 686, 1038, 3264
BciVI GTATCC 1 cut(s) 1154
BclI TGATCA 1 cut(s) 3442
BcnI CCSGG 2 cut(s) 1515, 2944
BcoDI GTCTC 8 cut(s) 190, 515, 588, 626, 2259, 3336, 3503, 3823
BcuI ACTAGT 1 cut(s) 322
BfaI CTAG 7 cut(s) 287, 323, 363, 1277, 2036, 3233, 4071
BfmI CTRYAG 6 cut(s) 197, 423, 654, 1155, 1587, 3539
BfrI CTTAAG 2 cut(s) 2192, 2260
BfuAI ACCTGC 4 cut(s) 1128, 1468, 1507, 2969
BfuI GTATCC 1 cut(s) 1154
BglII AGATCT 3 cut(s) 2308, 2519, 3310
BlpI GCTNAGC 1 cut(s) 604
Bme1390I CCNGG 6 cut(s) 263, 686, 1038, 1515, 2944, 3264
Bme18I GGWCC 2 cut(s) 242, 2660
BmeRI GACNNNNNGTC 1 cut(s) 1492
BmeT110I CYCGRG 1 cut(s) 2286
BmgT120I GGNCC 7 cut(s) 148, 242, 1040, 1231, 2660, 3503, 3790
BmiI GGNNCC 6 cut(s) 1610, 2294, 2909, 3504, 3791, 3868
BmrFI CCNGG 6 cut(s) 263, 686, 1038, 1515, 2944, 3264
BmrI ACTGGG 2 cut(s) 1082, 1253
BmuI ACTGGG 2 cut(s) 1082, 1253
BpiI GAAGAC 1 cut(s) 2868
BplI GAGNNNNNCTC 2 cut(s) 1365, 1397
BpmI CTGGAG 1 cut(s) 870
Bpu10I CCTNAGC 2 cut(s) 2897, 3602
Bpu1102I GCTNAGC 1 cut(s) 604
BpuMI CCSGG 2 cut(s) 1515, 2944
Bsa29I ATCGAT 1 cut(s) 2843
BsaBI GATNNNNATC 1 cut(s) 2307
BsaHI GRCGYC 2 cut(s) 183, 524
BsaI GGTCTC 1 cut(s) 2259
BsaJI CCNNGG 6 cut(s) 570, 685, 1037, 2942, 3833, 4036
BsaWI WCCGGW 1 cut(s) 3624
BsaXI ACNNNNNCTCC 4 cut(s) 1875, 1905, 2721, 2751
Bsc4I CCNNNNNNNGG 6 cut(s) 157, 761, 1228, 1454, 1618, 3093
Bse1I ACTGG 8 cut(s) 353, 1077, 1169, 1248, 2023, 2450, 3409, 4048
Bse21I CCTNAGG 2 cut(s) 2918, 3092
Bse3DI GCAATG 4 cut(s) 1233, 1438, 2971, 3136
Bse8I GATNNNNATC 1 cut(s) 2307
BseBI CCWGG 4 cut(s) 263, 686, 1038, 3264
BseCI ATCGAT 1 cut(s) 2843
BseDI CCNNGG 6 cut(s) 570, 685, 1037, 2942, 3833, 4036
BseJI GATNNNNATC 1 cut(s) 2307
BseLI CCNNNNNNNGG 6 cut(s) 157, 761, 1228, 1454, 1618, 3093
BseMI GCAATG 4 cut(s) 1233, 1438, 2971, 3136
BseNI ACTGG 8 cut(s) 353, 1077, 1169, 1248, 2023, 2450, 3409, 4048
BseRI GAGGAG 3 cut(s) 3207, 3341, 3619
BseSI GKGCMC 1 cut(s) 2960
BseX3I CGGCCG 1 cut(s) 3196
BsgI GTGCAG 5 cut(s) 1637, 1974, 3239, 3433, 3536
Bsh1285I CGRYCG 1 cut(s) 3199
BshNI GGYRCC 3 cut(s) 1608, 2907, 3866
BshVI ATCGAT 1 cut(s) 2843
BsiEI CGRYCG 1 cut(s) 3199
BsiHKAI GWGCWC 2 cut(s) 2201, 2960
BsiHKCI CYCGRG 1 cut(s) 2286
BsiSI CCGG 6 cut(s) 151, 1515, 2944, 2985, 3506, 3625
BslFI GGGAC 3 cut(s) 874, 1260, 2389
BslI CCNNNNNNNGG 6 cut(s) 157, 761, 1228, 1454, 1618, 3093
BsmAI GTCTC 8 cut(s) 190, 515, 588, 626, 2259, 3336, 3503, 3823
BsmBI CGTCTC 3 cut(s) 190, 515, 3503
BsmFI GGGAC 3 cut(s) 874, 1260, 2389
BsmI GAATGC 1 cut(s) 3304
Bso31I GGTCTC 1 cut(s) 2259
BsoBI CYCGRG 1 cut(s) 2286
Bsp1286I GDGCHC 2 cut(s) 2201, 2960
Bsp1407I TGTACA 1 cut(s) 1632
Bsp1720I GCTNAGC 1 cut(s) 604
Bsp19I CCATGG 1 cut(s) 4036
BspACI CCGC 6 cut(s) 1322, 2905, 2932, 3195, 3571, 3613
BspDI ATCGAT 1 cut(s) 2843
BspHI TCATGA 2 cut(s) 1315, 2353
BspLI GGNNCC 6 cut(s) 1610, 2294, 2909, 3504, 3791, 3868
BspMAI CTGCAG 5 cut(s) 201, 427, 1159, 1591, 3543
BspMI ACCTGC 4 cut(s) 1128, 1468, 1507, 2969
BspPI GGATC 7 cut(s) 1313, 1439, 1676, 2638, 2827, 3145, 3920
BspQI GCTCTTC 1 cut(s) 3591
BspT107I GGYRCC 3 cut(s) 1608, 2907, 3866
BspTI CTTAAG 2 cut(s) 2192, 2260
BspTNI GGTCTC 1 cut(s) 2259
BsrDI GCAATG 4 cut(s) 1233, 1438, 2971, 3136
BsrGI TGTACA 1 cut(s) 1632
BsrI ACTGG 8 cut(s) 353, 1077, 1169, 1248, 2023, 2450, 3409, 4048
BssECI CCNNGG 6 cut(s) 570, 685, 1037, 2942, 3833, 4036
BssNAI GTATAC 1 cut(s) 268
BssNI GRCGYC 2 cut(s) 183, 524
BssSI CACGAG 1 cut(s) 2006
BssT1I CCWWGG 2 cut(s) 570, 4036
Bst1107I GTATAC 1 cut(s) 268
Bst2BI CACGAG 1 cut(s) 2006
Bst2UI CCWGG 4 cut(s) 263, 686, 1038, 3264
Bst4CI ACNGT 7 cut(s) 620, 949, 1507, 1738, 1983, 2872, 3514
Bst6I CTCTTC 7 cut(s) 881, 1057, 1072, 2355, 2782, 3591, 3660
BstACI GRCGYC 2 cut(s) 183, 524
BstAFI CTTAAG 2 cut(s) 2192, 2260
BstAPI GCANNNNNTGC 2 cut(s) 3135, 4032
BstAUI TGTACA 1 cut(s) 1632
BstC8I GCNNGC 8 cut(s) 103, 201, 1155, 1219, 2903, 2932, 3896, 4076
BstDSI CCRYGG 2 cut(s) 3833, 4036
BstENI CCTNNNNNAGG 2 cut(s) 759, 1616
BstHHI GCGC 1 cut(s) 3758
BstMAI GTCTC 8 cut(s) 190, 515, 588, 626, 2259, 3336, 3503, 3823
BstMCI CGRYCG 1 cut(s) 3199
BstNI CCWGG 4 cut(s) 263, 686, 1038, 3264
BstNSI RCATGY 8 cut(s) 742, 1221, 1892, 2108, 2681, 2992, 3898, 4078
BstSCI CCNGG 6 cut(s) 261, 684, 1036, 1513, 2942, 3262
BstSFI CTRYAG 6 cut(s) 197, 423, 654, 1155, 1587, 3539
BstSLI GKGCMC 1 cut(s) 2960
BstV2I GAAGAC 1 cut(s) 2868
BstX2I RGATCY 6 cut(s) 1444, 1681, 2308, 2519, 2643, 3310
BstXI CCANNNNNNTGG 3 cut(s) 390, 2512, 4043
BstYI RGATCY 6 cut(s) 1444, 1681, 2308, 2519, 2643, 3310
BstZ17I GTATAC 1 cut(s) 268
BstZI CGGCCG 1 cut(s) 3196
Bsu15I ATCGAT 1 cut(s) 2843
Bsu36I CCTNAGG 2 cut(s) 2918, 3092
BsuI GTATCC 1 cut(s) 1154
BsuTUI ATCGAT 1 cut(s) 2843
BtgI CCRYGG 2 cut(s) 3833, 4036
BtgZI GCGATG 1 cut(s) 2701
BtsI GCAGTG 3 cut(s) 300, 2099, 3963
BtsIMutI CAGTG 8 cut(s) 300, 1070, 1241, 1512, 2099, 3044, 3416, 3963
BveI ACCTGC 4 cut(s) 1128, 1468, 1507, 2969
Cac8I GCNNGC 8 cut(s) 103, 201, 1155, 1219, 2903, 2932, 3896, 4076
CciI TCATGA 2 cut(s) 1315, 2353
CfoI GCGC 1 cut(s) 3758
Cfr13I GGNCC 7 cut(s) 148, 242, 1040, 1231, 2660, 3503, 3790
ClaI ATCGAT 1 cut(s) 2843
Csp6I GTAC 4 cut(s) 1097, 1609, 1633, 3867
CspCI CAANNNNNGTGG 2 cut(s) 3637, 3672
CviQI GTAC 4 cut(s) 1097, 1609, 1633, 3867
DraI TTTAAA 1 cut(s) 1129
DraIII CACNNNGTG 2 cut(s) 1457, 2693
DriI GACNNNNNGTC 1 cut(s) 1492
EaeI YGGCCR 2 cut(s) 380, 3196
EagI CGGCCG 1 cut(s) 3196
Eam1104I CTCTTC 7 cut(s) 881, 1057, 1072, 2355, 2782, 3591, 3660
Eam1105I GACNNNNNGTC 1 cut(s) 1492
EarI CTCTTC 7 cut(s) 881, 1057, 1072, 2355, 2782, 3591, 3660
EciI GGCGGA 1 cut(s) 3586
EclXI CGGCCG 1 cut(s) 3196
Eco130I CCWWGG 2 cut(s) 570, 4036
Eco147I AGGCCT 1 cut(s) 1650
Eco31I GGTCTC 1 cut(s) 2259
Eco32I GATATC 3 cut(s) 345, 553, 2623
Eco47I GGWCC 2 cut(s) 242, 2660
Eco52I CGGCCG 1 cut(s) 3196
Eco81I CCTNAGG 2 cut(s) 2918, 3092
Eco88I CYCGRG 1 cut(s) 2286
EcoNI CCTNNNNNAGG 2 cut(s) 759, 1616
EcoO109I RGGNCCY 1 cut(s) 3790
EcoRI GAATTC 1 cut(s) 1377
EcoRII CCWGG 4 cut(s) 261, 684, 1036, 3262
EcoRV GATATC 3 cut(s) 345, 553, 2623
EcoT14I CCWWGG 2 cut(s) 570, 4036
EcoT22I ATGCAT 5 cut(s) 698, 1438, 1992, 3036, 3900
ErhI CCWWGG 2 cut(s) 570, 4036
Esp3I CGTCTC 3 cut(s) 190, 515, 3503
FalI AAGNNNNNCTT 2 cut(s) 2151, 2183
FaqI GGGAC 3 cut(s) 874, 1260, 2389
FauI CCCGC 2 cut(s) 2939, 3606
FauNDI CATATG 3 cut(s) 496, 2237, 3874
FbaI TGATCA 1 cut(s) 3442
FblI GTMKAC 2 cut(s) 267, 3123
FspBI CTAG 7 cut(s) 287, 323, 363, 1277, 2036, 3233, 4071
GlaI GCGC 1 cut(s) 3757
GsuI CTGGAG 1 cut(s) 870
HapII CCGG 6 cut(s) 151, 1515, 2944, 2985, 3506, 3625
HhaI GCGC 1 cut(s) 3758
Hin1I GRCGYC 2 cut(s) 183, 524
Hin6I GCGC 1 cut(s) 3756
HinP1I GCGC 1 cut(s) 3756
HindIII AAGCTT 3 cut(s) 417, 1344, 2206
HpaII CCGG 6 cut(s) 151, 1515, 2944, 2985, 3506, 3625
HphI GGTGA 2 cut(s) 1488, 3671
Hpy166II GTNNAC 5 cut(s) 268, 320, 799, 2958, 3124
Hpy8I GTNNAC 5 cut(s) 268, 320, 799, 2958, 3124
Hpy99I CGWCG 1 cut(s) 3808
HpyCH4III ACNGT 7 cut(s) 620, 949, 1507, 1738, 1983, 2872, 3514
HpyCH4IV ACGT 3 cut(s) 183, 524, 1142
HpySE526I ACGT 3 cut(s) 183, 524, 1142
Hsp92I GRCGYC 2 cut(s) 183, 524
HspAI GCGC 1 cut(s) 3756
KpnI GGTACC 2 cut(s) 1612, 3870
Ksp22I TGATCA 1 cut(s) 3442
LguI GCTCTTC 1 cut(s) 3591
LmnI GCTCC 2 cut(s) 2164, 2292
MaeI CTAG 7 cut(s) 287, 323, 363, 1277, 2036, 3233, 4071
MaeII ACGT 3 cut(s) 183, 524, 1142
MaeIII GTNAC 6 cut(s) 1494, 1732, 2107, 2216, 3211, 3718
MflI RGATCY 6 cut(s) 1444, 1681, 2308, 2519, 2643, 3310
MhlI GDGCHC 2 cut(s) 2201, 2960
MlsI TGGCCA 1 cut(s) 382
MluNI TGGCCA 1 cut(s) 382
MlyI GAGTC 5 cut(s) 1012, 2820, 3208, 3338, 3677
MmeI TCCRAC 4 cut(s) 200, 1127, 1861, 2677
Mox20I TGGCCA 1 cut(s) 382
Mph1103I ATGCAT 5 cut(s) 698, 1438, 1992, 3036, 3900
MroXI GAANNNNTTC 1 cut(s) 3644
MscI TGGCCA 1 cut(s) 382
Msp20I TGGCCA 1 cut(s) 382
MspA1I CMGCKG 6 cut(s) 17, 848, 933, 1592, 3538, 3841
MspCI CTTAAG 2 cut(s) 2192, 2260
MspI CCGG 6 cut(s) 151, 1515, 2944, 2985, 3506, 3625
MspR9I CCNGG 6 cut(s) 263, 686, 1038, 1515, 2944, 3264
Mva1269I GAATGC 1 cut(s) 3304
MvaI CCWGG 4 cut(s) 263, 686, 1038, 3264
NciI CCSGG 2 cut(s) 1515, 2944
NcoI CCATGG 1 cut(s) 4036
NdeI CATATG 3 cut(s) 496, 2237, 3874
NlaIV GGNNCC 6 cut(s) 1610, 2294, 2909, 3504, 3791, 3868
NmuCI GTSAC 5 cut(s) 1494, 1732, 2107, 3211, 3718
NsiI ATGCAT 5 cut(s) 698, 1438, 1992, 3036, 3900
NspI RCATGY 8 cut(s) 742, 1221, 1892, 2108, 2681, 2992, 3898, 4078
PaeI GCATGC 3 cut(s) 1221, 3898, 4078
PaeR7I CTCGAG 1 cut(s) 2286
PagI TCATGA 2 cut(s) 1315, 2353
PaqCI CACCTGC 2 cut(s) 1507, 2969
PceI AGGCCT 1 cut(s) 1650
PciI ACATGT 1 cut(s) 738
PciSI GCTCTTC 1 cut(s) 3591
PcsI WCGNNNNNNNCGW 1 cut(s) 276
PctI GAATGC 1 cut(s) 3304
PdmI GAANNNNTTC 1 cut(s) 3644
PfeI GAWTC 9 cut(s) 161, 281, 927, 1543, 1655, 1688, 2376, 2578, 3391
PflMI CCANNNNNTGG 1 cut(s) 1228
PleI GAGTC 5 cut(s) 1012, 2819, 3208, 3337, 3676
PpsI GAGTC 5 cut(s) 1012, 2819, 3208, 3337, 3676
PscI ACATGT 1 cut(s) 738
PshBI ATTAAT 2 cut(s) 1713, 2637
Psp6I CCWGG 4 cut(s) 261, 684, 1036, 3262
PspGI CCWGG 4 cut(s) 261, 684, 1036, 3262
PspN4I GGNNCC 6 cut(s) 1610, 2294, 2909, 3504, 3791, 3868
PspPI GGNCC 7 cut(s) 148, 242, 1040, 1231, 2660, 3503, 3790
PspXI VCTCGAGB 1 cut(s) 2286
PstI CTGCAG 5 cut(s) 201, 427, 1159, 1591, 3543
PsuI RGATCY 6 cut(s) 1444, 1681, 2308, 2519, 2643, 3310
PvuII CAGCTG 6 cut(s) 17, 848, 933, 1592, 3538, 3841
RsaI GTAC 4 cut(s) 1098, 1610, 1634, 3868
RsaNI GTAC 4 cut(s) 1097, 1609, 1633, 3867
SapI GCTCTTC 1 cut(s) 3591
Sau96I GGNCC 7 cut(s) 148, 242, 1040, 1231, 2660, 3503, 3790
SbfI CCTGCAGG 2 cut(s) 201, 1159
SchI GAGTC 5 cut(s) 1012, 2820, 3208, 3338, 3677
ScrFI CCNGG 6 cut(s) 263, 686, 1038, 1515, 2944, 3264
SdaI CCTGCAGG 2 cut(s) 201, 1159
SduI GDGCHC 2 cut(s) 2201, 2960
SfcI CTRYAG 6 cut(s) 197, 423, 654, 1155, 1587, 3539
Sfr274I CTCGAG 1 cut(s) 2286
SinI GGWCC 2 cut(s) 242, 2660
SlaI CTCGAG 1 cut(s) 2286
SmlI CTYRAG 3 cut(s) 2192, 2260, 2286
SmoI CTYRAG 3 cut(s) 2192, 2260, 2286
SpeI ACTAGT 1 cut(s) 322
SphI GCATGC 3 cut(s) 1221, 3898, 4078
Sse8387I CCTGCAGG 2 cut(s) 201, 1159
SseBI AGGCCT 1 cut(s) 1650
SsiI CCGC 6 cut(s) 1322, 2905, 2932, 3195, 3571, 3613
SspI AATATT 2 cut(s) 2173, 3019
SspMI CTAG 7 cut(s) 287, 323, 363, 1277, 2036, 3233, 4071
StuI AGGCCT 1 cut(s) 1650
StyD4I CCNGG 6 cut(s) 261, 684, 1036, 1513, 2942, 3262
StyI CCWWGG 2 cut(s) 570, 4036
TaaI ACNGT 7 cut(s) 620, 949, 1507, 1738, 1983, 2872, 3514
TaiI ACGT 3 cut(s) 186, 527, 1145
TaqI TCGA 6 cut(s) 21, 519, 555, 2287, 2529, 2843
TaqII GACCGA 1 cut(s) 1720
TatI WGTACW 1 cut(s) 1632
TauI GCSGC 2 cut(s) 2908, 3198
TfiI GAWTC 9 cut(s) 161, 281, 927, 1543, 1655, 1688, 2376, 2578, 3391
TscAI CASTG 8 cut(s) 300, 1077, 1248, 1512, 2106, 3044, 3416, 3963
TseFI GTSAC 5 cut(s) 1494, 1732, 2107, 3211, 3718
Tsp45I GTSAC 5 cut(s) 1494, 1732, 2107, 3211, 3718
TspGWI ACGGA 2 cut(s) 347, 3822
TspRI CASTG 8 cut(s) 300, 1077, 1248, 1512, 2106, 3044, 3416, 3963
Van91I CCANNNNNTGG 1 cut(s) 1228
Vha464I CTTAAG 2 cut(s) 2192, 2260
VneI GTGCAC 1 cut(s) 2956
VpaK11BI GGWCC 2 cut(s) 242, 2660
VspI ATTAAT 2 cut(s) 1713, 2637
XagI CCTNNNNNAGG 2 cut(s) 759, 1616
XapI RAATTY 4 cut(s) 544, 748, 1377, 3546
XbaI TCTAGA 1 cut(s) 2035
XceI RCATGY 8 cut(s) 742, 1221, 1892, 2108, 2681, 2992, 3898, 4078
XhoI CTCGAG 1 cut(s) 2286
XmiI GTMKAC 2 cut(s) 267, 3123
XmnI GAANNNNTTC 1 cut(s) 3644
XspI CTAG 7 cut(s) 287, 323, 363, 1277, 2036, 3233, 4071
ZraI GACGTC 2 cut(s) 184, 525
Zsp2I ATGCAT 5 cut(s) 698, 1438, 1992, 3036, 3900
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.