Protein downstream neighbor of
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G54750 AT3G54750 AT3G54750 AT3G54750 AT3G54750 |
| fragaria_vesca | FvH4_6g21040 FvH4_6g21040 FvH4_6g21040 |
| malus_domestica | MD12G1046200.v1.1 MD14G1044900.v1.1 |
| prunus_persica | Prupe.7G089700_v2.0.a1 Prupe.7G089700_v2.0.a1 |
| pyrus_communis | pycom12g03970 pycom12g03980 pycom14g03800 pycom14g03810 |
| rosa_chinensis | RchiOBHm_Chr3g0477411 |
| rosa_laevigata | RLG00000023723 |
| rosa_multiflora | Rmu_ssc0000341.1_g000018 |
| rosa_roxburghii | Rroxscaffold_6G00404170 Rroxscaffold_6G00404650 |
| rosa_rugosa | Rorug03G0160600 Rorug03G0160700 |
| rosa_samantha | Rh3AG210900 Rh3BG244300 Rh3CG238100 Rh3DG237800 |
| rosa_wichuraiana | Rw3G019110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 3 cut(s) | 607, 1450, 1815 |
| Acc65I | GGTACC | 1 cut(s) | 1097 |
| AccB1I | GGYRCC | 2 cut(s) | 1025, 1097 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 397 |
| AccI | GTMKAC | 1 cut(s) | 703 |
| AccIII | TCCGGA | 1 cut(s) | 1783 |
| AciI | CCGC | 6 cut(s) | 36, 54, 57, 124, 413, 1457 |
| AclWI | GGATC | 8 cut(s) | 538, 620, 633, 1482, 1522, 1543, 1642, 1667 |
| AcoI | YGGCCR | 1 cut(s) | 414 |
| AcsI | RAATTY | 1 cut(s) | 1835 |
| AcuI | CTGAAG | 4 cut(s) | 81, 870, 1659, 1767 |
| AcyI | GRCGYC | 1 cut(s) | 92 |
| AdeI | CACNNNGTG | 1 cut(s) | 758 |
| AfaI | GTAC | 4 cut(s) | 319, 475, 1051, 1099 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 170, 397, 1813 |
| AflII | CTTAAG | 1 cut(s) | 344 |
| AflIII | ACRYGT | 1 cut(s) | 973 |
| AhlI | ACTAGT | 2 cut(s) | 365, 698 |
| AjnI | CCWGG | 2 cut(s) | 19, 661 |
| AleI | CACNNNNGTG | 1 cut(s) | 368 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1389, 1421 |
| Alw21I | GWGCWC | 1 cut(s) | 365 |
| Alw26I | GTCTC | 1 cut(s) | 1565 |
| Alw44I | GTGCAC | 1 cut(s) | 361 |
| AlwI | GGATC | 8 cut(s) | 538, 620, 633, 1482, 1522, 1543, 1642, 1667 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1715, 1862 |
| Aor13HI | TCCGGA | 1 cut(s) | 1783 |
| AoxI | GGCC | 5 cut(s) | 73, 401, 414, 1258, 1345 |
| ApaLI | GTGCAC | 1 cut(s) | 361 |
| ApeKI | GCWGC | 6 cut(s) | 38, 566, 648, 1442, 1709, 1742 |
| ApoI | RAATTY | 1 cut(s) | 1835 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1752 |
| Asp718I | GGTACC | 1 cut(s) | 1097 |
| AspLEI | GCGC | 1 cut(s) | 1812 |
| AspS9I | GGNCC | 5 cut(s) | 74, 279, 328, 401, 1258 |
| AsuC2I | CCSGG | 1 cut(s) | 1304 |
| AsuHPI | GGTGA | 3 cut(s) | 521, 1102, 1413 |
| AvaII | GGWCC | 2 cut(s) | 279, 328 |
| BaeGI | GKGCMC | 1 cut(s) | 365 |
| BamHI | GGATCC | 1 cut(s) | 625 |
| BanI | GGYRCC | 2 cut(s) | 1025, 1097 |
| BanII | GRGCYC | 1 cut(s) | 837 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 613, 645 |
| Bbv12I | GWGCWC | 1 cut(s) | 365 |
| BbvCI | CCTCAGC | 1 cut(s) | 939 |
| BbvI | GCAGC | 6 cut(s) | 25, 553, 660, 1429, 1721, 1754 |
| BccI | CCATC | 1 cut(s) | 1454 |
| BceAI | ACGGC | 3 cut(s) | 401, 807, 1179 |
| BciT130I | CCWGG | 2 cut(s) | 21, 663 |
| BclI | TGATCA | 1 cut(s) | 808 |
| BcnI | CCSGG | 1 cut(s) | 1304 |
| BcoDI | GTCTC | 1 cut(s) | 1565 |
| BcuI | ACTAGT | 2 cut(s) | 365, 698 |
| BfaI | CTAG | 7 cut(s) | 228, 366, 699, 729, 789, 1569, 1614 |
| BfmI | CTRYAG | 2 cut(s) | 1218, 1626 |
| BfrI | CTTAAG | 1 cut(s) | 344 |
| BfuAI | ACCTGC | 3 cut(s) | 607, 1450, 1815 |
| BglII | AGATCT | 1 cut(s) | 1373 |
| BisI | GCNGC | 8 cut(s) | 39, 55, 414, 567, 649, 1443, 1710, 1743 |
| BlsI | GCNGC | 8 cut(s) | 40, 56, 415, 568, 650, 1444, 1711, 1744 |
| BmcAI | AGTACT | 2 cut(s) | 319, 475 |
| Bme1390I | CCNGG | 3 cut(s) | 21, 663, 1304 |
| Bme18I | GGWCC | 2 cut(s) | 279, 328 |
| BmgT120I | GGNCC | 5 cut(s) | 74, 279, 328, 401, 1258 |
| BmiI | GGNNCC | 6 cut(s) | 330, 402, 627, 675, 1027, 1099 |
| BmrFI | CCNGG | 3 cut(s) | 21, 663, 1304 |
| BmrI | ACTGGG | 3 cut(s) | 71, 762, 1123 |
| BmsI | GCATC | 2 cut(s) | 1236, 1576 |
| BmuI | ACTGGG | 3 cut(s) | 71, 762, 1123 |
| BpmI | CTGGAG | 1 cut(s) | 141 |
| Bpu10I | CCTNAGC | 3 cut(s) | 6, 829, 939 |
| BpuEI | CTTGAG | 2 cut(s) | 29, 1716 |
| BpuMI | CCSGG | 1 cut(s) | 1304 |
| BsaHI | GRCGYC | 1 cut(s) | 92 |
| BsaI | GGTCTC | 1 cut(s) | 1565 |
| BsaJI | CCNNGG | 3 cut(s) | 1302, 1601, 1875 |
| BsaWI | WCCGGW | 1 cut(s) | 1783 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1389, 1419 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 170, 397, 1813 |
| Bse1I | ACTGG | 7 cut(s) | 77, 595, 643, 768, 1081, 1129, 1287 |
| Bse3DI | GCAATG | 2 cut(s) | 558, 1027 |
| BseAI | TCCGGA | 1 cut(s) | 1783 |
| BseBI | CCWGG | 2 cut(s) | 21, 663 |
| BseDI | CCNNGG | 3 cut(s) | 1302, 1601, 1875 |
| BseGI | GGATG | 5 cut(s) | 132, 154, 256, 1408, 1591 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 170, 397, 1813 |
| BseMI | GCAATG | 2 cut(s) | 558, 1027 |
| BseMII | CTCAG | 5 cut(s) | 95, 843, 930, 1254, 1707 |
| BseNI | ACTGG | 7 cut(s) | 77, 595, 643, 768, 1081, 1129, 1287 |
| BseSI | GKGCMC | 1 cut(s) | 365 |
| BseX3I | CGGCCG | 1 cut(s) | 414 |
| BseXI | GCAGC | 6 cut(s) | 25, 553, 660, 1429, 1721, 1754 |
| BseYI | CCCAGC | 1 cut(s) | 724 |
| Bsh1285I | CGRYCG | 1 cut(s) | 417 |
| BshFI | GGCC | 5 cut(s) | 75, 403, 416, 1260, 1347 |
| BshNI | GGYRCC | 2 cut(s) | 1025, 1097 |
| BsiEI | CGRYCG | 1 cut(s) | 417 |
| BsiHKAI | GWGCWC | 1 cut(s) | 365 |
| BsiSI | CCGG | 2 cut(s) | 1304, 1784 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 170, 397, 1813 |
| BsmAI | GTCTC | 1 cut(s) | 1565 |
| BsmI | GAATGC | 3 cut(s) | 136, 291, 1444 |
| BsnI | GGCC | 5 cut(s) | 75, 403, 416, 1260, 1347 |
| Bso31I | GGTCTC | 1 cut(s) | 1565 |
| Bsp1286I | GDGCHC | 2 cut(s) | 365, 837 |
| Bsp13I | TCCGGA | 1 cut(s) | 1783 |
| Bsp19I | CCATGG | 1 cut(s) | 1601 |
| BspACI | CCGC | 6 cut(s) | 36, 54, 57, 124, 413, 1457 |
| BspANI | GGCC | 5 cut(s) | 75, 403, 416, 1260, 1347 |
| BspCNI | CTCAG | 5 cut(s) | 96, 842, 931, 1253, 1708 |
| BspEI | TCCGGA | 1 cut(s) | 1783 |
| BspHI | TCATGA | 2 cut(s) | 235, 1380 |
| BspLI | GGNNCC | 6 cut(s) | 330, 402, 627, 675, 1027, 1099 |
| BspMI | ACCTGC | 3 cut(s) | 607, 1450, 1815 |
| BspPI | GGATC | 8 cut(s) | 538, 620, 633, 1482, 1522, 1543, 1642, 1667 |
| BspQI | GCTCTTC | 1 cut(s) | 105 |
| BspT107I | GGYRCC | 2 cut(s) | 1025, 1097 |
| BspTI | CTTAAG | 1 cut(s) | 344 |
| BspTNI | GGTCTC | 1 cut(s) | 1565 |
| BsrDI | GCAATG | 2 cut(s) | 558, 1027 |
| BsrI | ACTGG | 7 cut(s) | 77, 595, 643, 768, 1081, 1129, 1287 |
| BssECI | CCNNGG | 3 cut(s) | 1302, 1601, 1875 |
| BssNAI | GTATAC | 1 cut(s) | 704 |
| BssNI | GRCGYC | 1 cut(s) | 92 |
| BssT1I | CCWWGG | 2 cut(s) | 1601, 1875 |
| Bst1107I | GTATAC | 1 cut(s) | 704 |
| Bst2UI | CCWGG | 2 cut(s) | 21, 663 |
| Bst6I | CTCTTC | 2 cut(s) | 105, 724 |
| BstACI | GRCGYC | 1 cut(s) | 92 |
| BstAFI | CTTAAG | 1 cut(s) | 344 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 654 |
| BstC8I | GCNNGC | 2 cut(s) | 361, 659 |
| BstDEI | CTNAG | 7 cut(s) | 6, 104, 378, 829, 939, 1240, 1716 |
| BstDSI | CCRYGG | 1 cut(s) | 1601 |
| BstF5I | GGATG | 5 cut(s) | 132, 154, 256, 1408, 1591 |
| BstHHI | GCGC | 1 cut(s) | 1812 |
| BstMAI | GTCTC | 1 cut(s) | 1565 |
| BstMCI | CGRYCG | 1 cut(s) | 417 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 11, 121, 452, 654 |
| BstNI | CCWGG | 2 cut(s) | 21, 663 |
| BstNSI | RCATGY | 2 cut(s) | 977, 1015 |
| BstSCI | CCNGG | 3 cut(s) | 19, 661, 1302 |
| BstSFI | CTRYAG | 2 cut(s) | 1218, 1626 |
| BstSLI | GKGCMC | 1 cut(s) | 365 |
| BstV1I | GCAGC | 6 cut(s) | 25, 553, 660, 1429, 1721, 1754 |
| BstX2I | RGATCY | 7 cut(s) | 530, 625, 1373, 1474, 1514, 1535, 1634 |
| BstYI | RGATCY | 7 cut(s) | 530, 625, 1373, 1474, 1514, 1535, 1634 |
| BstZ17I | GTATAC | 1 cut(s) | 704 |
| BstZI | CGGCCG | 1 cut(s) | 414 |
| BsuRI | GGCC | 5 cut(s) | 75, 403, 416, 1260, 1347 |
| BtgI | CCRYGG | 1 cut(s) | 1601 |
| BtgZI | GCGATG | 1 cut(s) | 77 |
| BtsCI | GGATG | 5 cut(s) | 132, 154, 256, 1408, 1591 |
| BtsI | GCAGTG | 1 cut(s) | 763 |
| BtsIMutI | CAGTG | 2 cut(s) | 763, 1280 |
| BveI | ACCTGC | 3 cut(s) | 607, 1450, 1815 |
| Cac8I | GCNNGC | 2 cut(s) | 361, 659 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1715, 1862 |
| CciI | TCATGA | 2 cut(s) | 235, 1380 |
| CfoI | GCGC | 1 cut(s) | 1812 |
| Cfr13I | GGNCC | 5 cut(s) | 74, 279, 328, 401, 1258 |
| CseI | GACGC | 2 cut(s) | 100, 1278 |
| CsiI | ACCWGGT | 1 cut(s) | 19 |
| Csp6I | GTAC | 4 cut(s) | 318, 474, 1050, 1098 |
| CviAII | CATG | 9 cut(s) | 236, 876, 974, 981, 1012, 1343, 1381, 1471, 1602 |
| CviQI | GTAC | 4 cut(s) | 318, 474, 1050, 1098 |
| DdeI | CTNAG | 7 cut(s) | 6, 104, 378, 829, 939, 1240, 1716 |
| DraIII | CACNNNGTG | 1 cut(s) | 758 |
| EaeI | YGGCCR | 1 cut(s) | 414 |
| EagI | CGGCCG | 1 cut(s) | 414 |
| Eam1104I | CTCTTC | 2 cut(s) | 105, 724 |
| EarI | CTCTTC | 2 cut(s) | 105, 724 |
| EciI | GGCGGA | 1 cut(s) | 72 |
| EclXI | CGGCCG | 1 cut(s) | 414 |
| Eco130I | CCWWGG | 2 cut(s) | 1601, 1875 |
| Eco24I | GRGCYC | 1 cut(s) | 837 |
| Eco31I | GGTCTC | 1 cut(s) | 1565 |
| Eco32I | GATATC | 1 cut(s) | 233 |
| Eco47I | GGWCC | 2 cut(s) | 279, 328 |
| Eco52I | CGGCCG | 1 cut(s) | 414 |
| Eco57I | CTGAAG | 4 cut(s) | 81, 870, 1659, 1767 |
| EcoRII | CCWGG | 2 cut(s) | 19, 661 |
| EcoRV | GATATC | 1 cut(s) | 233 |
| EcoT14I | CCWWGG | 2 cut(s) | 1601, 1875 |
| EcoT22I | ATGCAT | 2 cut(s) | 1472, 1591 |
| EcoT38I | GRGCYC | 1 cut(s) | 837 |
| ErhI | CCWWGG | 2 cut(s) | 1601, 1875 |
| FaeI | CATG | 9 cut(s) | 239, 879, 977, 984, 1015, 1346, 1384, 1474, 1605 |
| FatI | CATG | 9 cut(s) | 235, 875, 973, 980, 1011, 1342, 1380, 1470, 1601 |
| FauI | CCCGC | 1 cut(s) | 43 |
| FbaI | TGATCA | 1 cut(s) | 808 |
| FblI | GTMKAC | 1 cut(s) | 703 |
| Fnu4HI | GCNGC | 8 cut(s) | 39, 55, 414, 567, 649, 1443, 1710, 1743 |
| FokI | GGATG | 5 cut(s) | 139, 161, 263, 1415, 1598 |
| FriOI | GRGCYC | 1 cut(s) | 837 |
| Fsp4HI | GCNGC | 8 cut(s) | 39, 55, 414, 567, 649, 1443, 1710, 1743 |
| FspBI | CTAG | 7 cut(s) | 228, 366, 699, 729, 789, 1569, 1614 |
| GlaI | GCGC | 1 cut(s) | 1811 |
| GluI | GCNGC | 8 cut(s) | 39, 55, 414, 567, 649, 1443, 1710, 1743 |
| GsaI | CCCAGC | 1 cut(s) | 728 |
| GsuI | CTGGAG | 1 cut(s) | 141 |
| HaeIII | GGCC | 5 cut(s) | 75, 403, 416, 1260, 1347 |
| HapII | CCGG | 2 cut(s) | 1304, 1784 |
| HgaI | GACGC | 2 cut(s) | 100, 1278 |
| HhaI | GCGC | 1 cut(s) | 1812 |
| Hin1I | GRCGYC | 1 cut(s) | 92 |
| Hin1II | CATG | 9 cut(s) | 239, 879, 977, 984, 1015, 1346, 1384, 1474, 1605 |
| Hin6I | GCGC | 1 cut(s) | 1810 |
| HinP1I | GCGC | 1 cut(s) | 1810 |
| HincII | GTYRAC | 3 cut(s) | 421, 924, 1134 |
| HindII | GTYRAC | 3 cut(s) | 421, 924, 1134 |
| HindIII | AAGCTT | 1 cut(s) | 1648 |
| HpaI | GTTAAC | 1 cut(s) | 421 |
| HpaII | CCGG | 2 cut(s) | 1304, 1784 |
| HphI | GGTGA | 3 cut(s) | 521, 1102, 1413 |
| Hpy166II | GTNNAC | 9 cut(s) | 363, 421, 596, 704, 924, 1050, 1074, 1134, 1820 |
| Hpy188I | TCNGA | 9 cut(s) | 100, 190, 735, 850, 1243, 1437, 1479, 1639, 1688 |
| Hpy8I | GTNNAC | 9 cut(s) | 363, 421, 596, 704, 924, 1050, 1074, 1134, 1820 |
| Hpy99I | CGWCG | 1 cut(s) | 1272 |
| HpyAV | CCTTC | 6 cut(s) | 61, 105, 639, 772, 1186, 1634 |
| HpyCH4V | TGCA | 8 cut(s) | 266, 363, 1147, 1249, 1412, 1470, 1543, 1589 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 11, 121, 452, 654 |
| HpyF3I | CTNAG | 7 cut(s) | 6, 104, 378, 829, 939, 1240, 1716 |
| Hsp92I | GRCGYC | 1 cut(s) | 92 |
| Hsp92II | CATG | 9 cut(s) | 239, 879, 977, 984, 1015, 1346, 1384, 1474, 1605 |
| HspAI | GCGC | 1 cut(s) | 1810 |
| Kpn2I | TCCGGA | 1 cut(s) | 1783 |
| KpnI | GGTACC | 1 cut(s) | 1101 |
| Ksp22I | TGATCA | 1 cut(s) | 808 |
| KspAI | GTTAAC | 1 cut(s) | 421 |
| LguI | GCTCTTC | 1 cut(s) | 105 |
| LmnI | GCTCC | 4 cut(s) | 59, 166, 1207, 1717 |
| Lsp1109I | GCAGC | 6 cut(s) | 25, 553, 660, 1429, 1721, 1754 |
| LweI | GCATC | 2 cut(s) | 1236, 1576 |
| MabI | ACCWGGT | 1 cut(s) | 19 |
| MaeI | CTAG | 7 cut(s) | 228, 366, 699, 729, 789, 1569, 1614 |
| MaeIII | GTNAC | 3 cut(s) | 1213, 1696, 1795 |
| MboII | GAAGA | 4 cut(s) | 122, 600, 711, 1760 |
| MflI | RGATCY | 7 cut(s) | 530, 625, 1373, 1474, 1514, 1535, 1634 |
| MhlI | GDGCHC | 2 cut(s) | 365, 837 |
| MluCI | AATT | 8 cut(s) | 212, 604, 813, 1253, 1366, 1578, 1726, 1835 |
| MlyI | GAGTC | 4 cut(s) | 194, 983, 1149, 1258 |
| MmeI | TCCRAC | 2 cut(s) | 713, 1513 |
| Mph1103I | ATGCAT | 2 cut(s) | 1472, 1591 |
| MroI | TCCGGA | 1 cut(s) | 1783 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1752 |
| MseI | TTAA | 9 cut(s) | 201, 345, 420, 489, 962, 1157, 1364, 1464, 1581 |
| MslI | CAYNNNNRTG | 2 cut(s) | 245, 368 |
| MspA1I | CMGCKG | 3 cut(s) | 38, 938, 1745 |
| MspCI | CTTAAG | 1 cut(s) | 344 |
| MspI | CCGG | 2 cut(s) | 1304, 1784 |
| MspR9I | CCNGG | 3 cut(s) | 21, 663, 1304 |
| Mva1269I | GAATGC | 3 cut(s) | 136, 291, 1444 |
| MvaI | CCWGG | 2 cut(s) | 21, 663 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 11, 121, 452, 654 |
| NciI | CCSGG | 1 cut(s) | 1304 |
| NcoI | CCATGG | 1 cut(s) | 1601 |
| NlaIII | CATG | 9 cut(s) | 239, 879, 977, 984, 1015, 1346, 1384, 1474, 1605 |
| NlaIV | GGNNCC | 6 cut(s) | 330, 402, 627, 675, 1027, 1099 |
| NmuCI | GTSAC | 1 cut(s) | 1213 |
| NsiI | ATGCAT | 2 cut(s) | 1472, 1591 |
| NspI | RCATGY | 2 cut(s) | 977, 1015 |
| OliI | CACNNNNGTG | 1 cut(s) | 368 |
| PagI | TCATGA | 2 cut(s) | 235, 1380 |
| PciI | ACATGT | 1 cut(s) | 973 |
| PciSI | GCTCTTC | 1 cut(s) | 105 |
| PctI | GAATGC | 3 cut(s) | 136, 291, 1444 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1752 |
| PfeI | GAWTC | 7 cut(s) | 152, 349, 575, 736, 1307, 1787, 1880 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 397 |
| PkrI | GCNGC | 8 cut(s) | 40, 56, 415, 568, 650, 1444, 1711, 1744 |
| PleI | GAGTC | 4 cut(s) | 193, 983, 1148, 1258 |
| PpsI | GAGTC | 4 cut(s) | 193, 983, 1148, 1258 |
| PscI | ACATGT | 1 cut(s) | 973 |
| Psp6I | CCWGG | 2 cut(s) | 19, 661 |
| PspFI | CCCAGC | 1 cut(s) | 724 |
| PspGI | CCWGG | 2 cut(s) | 19, 661 |
| PspN4I | GGNNCC | 6 cut(s) | 330, 402, 627, 675, 1027, 1099 |
| PspPI | GGNCC | 5 cut(s) | 74, 279, 328, 401, 1258 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1715, 1862 |
| PsuI | RGATCY | 7 cut(s) | 530, 625, 1373, 1474, 1514, 1535, 1634 |
| PvuII | CAGCTG | 2 cut(s) | 938, 1745 |
| RsaI | GTAC | 4 cut(s) | 319, 475, 1051, 1099 |
| RsaNI | GTAC | 4 cut(s) | 318, 474, 1050, 1098 |
| RseI | CAYNNNNRTG | 2 cut(s) | 245, 368 |
| SapI | GCTCTTC | 1 cut(s) | 105 |
| SaqAI | TTAA | 9 cut(s) | 201, 345, 420, 489, 962, 1157, 1364, 1464, 1581 |
| SatI | GCNGC | 8 cut(s) | 39, 55, 414, 567, 649, 1443, 1710, 1743 |
| Sau96I | GGNCC | 5 cut(s) | 74, 279, 328, 401, 1258 |
| ScaI | AGTACT | 2 cut(s) | 319, 475 |
| SchI | GAGTC | 4 cut(s) | 194, 983, 1149, 1258 |
| ScrFI | CCNGG | 3 cut(s) | 21, 663, 1304 |
| SduI | GDGCHC | 2 cut(s) | 365, 837 |
| SexAI | ACCWGGT | 1 cut(s) | 19 |
| SfaNI | GCATC | 2 cut(s) | 1236, 1576 |
| SfcI | CTRYAG | 2 cut(s) | 1218, 1626 |
| SinI | GGWCC | 2 cut(s) | 279, 328 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 245, 368 |
| SmlI | CTYRAG | 3 cut(s) | 44, 344, 1731 |
| SmoI | CTYRAG | 3 cut(s) | 44, 344, 1731 |
| SpeI | ACTAGT | 2 cut(s) | 365, 698 |
| Sse9I | AATT | 8 cut(s) | 212, 604, 813, 1253, 1366, 1578, 1726, 1835 |
| SsiI | CCGC | 6 cut(s) | 36, 54, 57, 124, 413, 1457 |
| SspMI | CTAG | 7 cut(s) | 228, 366, 699, 729, 789, 1569, 1614 |
| StyD4I | CCNGG | 3 cut(s) | 19, 661, 1302 |
| StyI | CCWWGG | 2 cut(s) | 1601, 1875 |
| TaqI | TCGA | 2 cut(s) | 16, 1267 |
| TaqII | GACCGA | 1 cut(s) | 504 |
| TasI | AATT | 8 cut(s) | 212, 604, 813, 1253, 1366, 1578, 1726, 1835 |
| TatI | WGTACW | 3 cut(s) | 317, 473, 1049 |
| TauI | GCSGC | 2 cut(s) | 57, 416 |
| TfiI | GAWTC | 7 cut(s) | 152, 349, 575, 736, 1307, 1787, 1880 |
| Tru1I | TTAA | 9 cut(s) | 201, 345, 420, 489, 962, 1157, 1364, 1464, 1581 |
| Tru9I | TTAA | 9 cut(s) | 201, 345, 420, 489, 962, 1157, 1364, 1464, 1581 |
| TscAI | CASTG | 2 cut(s) | 763, 1287 |
| TseFI | GTSAC | 1 cut(s) | 1213 |
| TseI | GCWGC | 6 cut(s) | 38, 566, 648, 1442, 1709, 1742 |
| Tsp45I | GTSAC | 1 cut(s) | 1213 |
| TspRI | CASTG | 2 cut(s) | 763, 1287 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 397 |
| Vha464I | CTTAAG | 1 cut(s) | 344 |
| VneI | GTGCAC | 1 cut(s) | 361 |
| VpaK11BI | GGWCC | 2 cut(s) | 279, 328 |
| XapI | RAATTY | 1 cut(s) | 1835 |
| XbaI | TCTAGA | 1 cut(s) | 788 |
| XceI | RCATGY | 2 cut(s) | 977, 1015 |
| XmiI | GTMKAC | 1 cut(s) | 703 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1752 |
| XspI | CTAG | 7 cut(s) | 228, 366, 699, 729, 789, 1569, 1614 |
| ZrmI | AGTACT | 2 cut(s) | 319, 475 |
| Zsp2I | ATGCAT | 2 cut(s) | 1472, 1591 |