Protein downstream neighbor of
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G54750 AT3G54750 AT3G54750 AT3G54750 AT3G54750 |
| fragaria_vesca | FvH4_6g21040 FvH4_6g21040 FvH4_6g21040 |
| malus_domestica | MD12G1046200.v1.1 MD14G1044900.v1.1 |
| prunus_persica | Prupe.7G089700_v2.0.a1 Prupe.7G089700_v2.0.a1 |
| pyrus_communis | pycom12g03970 pycom12g03980 pycom14g03800 pycom14g03810 |
| rosa_chinensis | RchiOBHm_Chr3g0477411 |
| rosa_laevigata | RLG00000023723 |
| rosa_multiflora | Rmu_ssc0000341.1_g000018 |
| rosa_roxburghii | Rroxscaffold_6G00404170 Rroxscaffold_6G00404650 |
| rosa_rugosa | Rorug03G0160600 Rorug03G0160700 |
| rosa_samantha | Rh3AG210900 Rh3BG244300 Rh3CG238100 Rh3DG237800 |
| rosa_wichuraiana | Rw3G019110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1410 |
| Acc36I | ACCTGC | 1 cut(s) | 601 |
| Acc65I | GGTACC | 1 cut(s) | 1022 |
| AccB1I | GGYRCC | 2 cut(s) | 752, 1022 |
| AccI | GTMKAC | 1 cut(s) | 249 |
| AciI | CCGC | 8 cut(s) | 36, 109, 507, 700, 750, 899, 1551, 1736 |
| AclWI | GGATC | 5 cut(s) | 810, 1527, 1540, 1577, 1590 |
| AcoI | YGGCCR | 1 cut(s) | 1261 |
| AcsI | RAATTY | 2 cut(s) | 838, 1255 |
| AcuI | CTGAAG | 3 cut(s) | 65, 1656, 1764 |
| AcyI | GRCGYC | 1 cut(s) | 1407 |
| AdeI | CACNNNGTG | 1 cut(s) | 1351 |
| AfaI | GTAC | 4 cut(s) | 1024, 1048, 1081, 1344 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 155 |
| AgsI | TTSAA | 9 cut(s) | 315, 458, 688, 838, 1483, 1574, 1690, 1822, 1831 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 517 |
| AhlI | ACTAGT | 2 cut(s) | 692, 761 |
| AjiI | CACGTC | 1 cut(s) | 435 |
| AjnI | CCWGG | 3 cut(s) | 570, 655, 1780 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 567, 599, 764, 796 |
| Alw21I | GWGCWC | 1 cut(s) | 1236 |
| Alw26I | GTCTC | 2 cut(s) | 1090, 1562 |
| AlwI | GGATC | 5 cut(s) | 810, 1527, 1540, 1577, 1590 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1712 |
| AoxI | GGCC | 1 cut(s) | 1261 |
| ApeKI | GCWGC | 5 cut(s) | 106, 530, 1445, 1611, 1739 |
| ApoI | RAATTY | 2 cut(s) | 838, 1255 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1707 |
| Asp718I | GGTACC | 1 cut(s) | 1022 |
| AsuC2I | CCSGG | 2 cut(s) | 21, 1307 |
| AsuHPI | GGTGA | 4 cut(s) | 521, 629, 1416, 1753 |
| AsuII | TTCGAA | 2 cut(s) | 368, 1196 |
| BalI | TGGCCA | 1 cut(s) | 1263 |
| BamHI | GGATCC | 2 cut(s) | 1532, 1582 |
| BanI | GGYRCC | 2 cut(s) | 752, 1022 |
| BanII | GRGCYC | 4 cut(s) | 831, 1097, 1236, 1634 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 604, 636 |
| BbsI | GAAGAC | 1 cut(s) | 1752 |
| Bbv12I | GWGCWC | 1 cut(s) | 1236 |
| BbvCI | CCTCAGC | 1 cut(s) | 936 |
| BbvI | GCAGC | 5 cut(s) | 118, 542, 1432, 1623, 1751 |
| BccI | CCATC | 3 cut(s) | 94, 1237, 1523 |
| BceAI | ACGGC | 4 cut(s) | 78, 801, 1089, 1176 |
| BciT130I | CCWGG | 3 cut(s) | 572, 657, 1782 |
| BcnI | CCSGG | 2 cut(s) | 21, 1307 |
| BcoDI | GTCTC | 2 cut(s) | 1090, 1562 |
| BcuI | ACTAGT | 2 cut(s) | 692, 761 |
| BfaI | CTAG | 6 cut(s) | 171, 219, 267, 693, 762, 1319 |
| BfmI | CTRYAG | 1 cut(s) | 1698 |
| BfuAI | ACCTGC | 1 cut(s) | 601 |
| BisI | GCNGC | 6 cut(s) | 107, 531, 1446, 1612, 1737, 1740 |
| BlsI | GCNGC | 6 cut(s) | 108, 532, 1447, 1613, 1738, 1741 |
| Bme1390I | CCNGG | 5 cut(s) | 21, 572, 657, 1307, 1782 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 517 |
| BmgBI | CACGTC | 1 cut(s) | 435 |
| BmiI | GGNNCC | 6 cut(s) | 669, 754, 1024, 1534, 1584, 1786 |
| BmrFI | CCNGG | 5 cut(s) | 21, 572, 657, 1307, 1782 |
| BmrI | ACTGGG | 1 cut(s) | 713 |
| BmsI | GCATC | 4 cut(s) | 47, 556, 1113, 1723 |
| BmuI | ACTGGG | 1 cut(s) | 713 |
| BpiI | GAAGAC | 1 cut(s) | 1752 |
| BpmI | CTGGAG | 3 cut(s) | 126, 1200, 1443 |
| Bpu10I | CCTNAGC | 3 cut(s) | 300, 823, 936 |
| Bpu14I | TTCGAA | 2 cut(s) | 368, 1196 |
| BpuEI | CTTGAG | 3 cut(s) | 761, 979, 1297 |
| BpuMI | CCSGG | 2 cut(s) | 21, 1307 |
| BsaBI | GATNNNNATC | 2 cut(s) | 795, 1587 |
| BsaHI | GRCGYC | 1 cut(s) | 1407 |
| BsaI | GGTCTC | 1 cut(s) | 1562 |
| BsaJI | CCNNGG | 4 cut(s) | 570, 817, 1305, 1598 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1776, 1806 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 155 |
| Bse1I | ACTGG | 1 cut(s) | 719 |
| Bse3DI | GCAATG | 2 cut(s) | 1117, 1313 |
| Bse8I | GATNNNNATC | 2 cut(s) | 795, 1587 |
| BseBI | CCWGG | 3 cut(s) | 572, 657, 1782 |
| BseDI | CCNNGG | 4 cut(s) | 570, 817, 1305, 1598 |
| BseGI | GGATG | 3 cut(s) | 117, 247, 988 |
| BseJI | GATNNNNATC | 2 cut(s) | 795, 1587 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 155 |
| BseMI | GCAATG | 2 cut(s) | 1117, 1313 |
| BseMII | CTCAG | 7 cut(s) | 86, 483, 837, 927, 1251, 1704, 1814 |
| BseNI | ACTGG | 1 cut(s) | 719 |
| BseRI | GAGGAG | 1 cut(s) | 114 |
| BseXI | GCAGC | 5 cut(s) | 118, 542, 1432, 1623, 1751 |
| BshFI | GGCC | 1 cut(s) | 1263 |
| BshNI | GGYRCC | 2 cut(s) | 752, 1022 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1236 |
| BsiSI | CCGG | 2 cut(s) | 21, 1307 |
| BslFI | GGGAC | 2 cut(s) | 73, 1394 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 155 |
| BsmAI | GTCTC | 2 cut(s) | 1090, 1562 |
| BsmFI | GGGAC | 2 cut(s) | 73, 1394 |
| BsmI | GAATGC | 3 cut(s) | 121, 301, 1447 |
| BsnI | GGCC | 1 cut(s) | 1263 |
| Bso31I | GGTCTC | 1 cut(s) | 1562 |
| Bsp119I | TTCGAA | 2 cut(s) | 368, 1196 |
| Bsp1286I | GDGCHC | 4 cut(s) | 831, 1097, 1236, 1634 |
| Bsp1407I | TGTACA | 1 cut(s) | 1342 |
| Bsp143I | GATC | 6 cut(s) | 802, 1145, 1376, 1532, 1582, 1723 |
| Bsp19I | CCATGG | 1 cut(s) | 1598 |
| BspACI | CCGC | 8 cut(s) | 36, 109, 507, 700, 750, 899, 1551, 1736 |
| BspANI | GGCC | 1 cut(s) | 1263 |
| BspCNI | CTCAG | 7 cut(s) | 87, 484, 836, 928, 1250, 1705, 1813 |
| BspLI | GGNNCC | 6 cut(s) | 669, 754, 1024, 1534, 1584, 1786 |
| BspMI | ACCTGC | 1 cut(s) | 601 |
| BspPI | GGATC | 5 cut(s) | 810, 1527, 1540, 1577, 1590 |
| BspT104I | TTCGAA | 2 cut(s) | 368, 1196 |
| BspT107I | GGYRCC | 2 cut(s) | 752, 1022 |
| BspTNI | GGTCTC | 1 cut(s) | 1562 |
| BsrDI | GCAATG | 2 cut(s) | 1117, 1313 |
| BsrGI | TGTACA | 1 cut(s) | 1342 |
| BsrI | ACTGG | 1 cut(s) | 719 |
| BssECI | CCNNGG | 4 cut(s) | 570, 817, 1305, 1598 |
| BssMI | GATC | 6 cut(s) | 802, 1145, 1376, 1532, 1582, 1723 |
| BssNAI | GTATAC | 1 cut(s) | 250 |
| BssNI | GRCGYC | 1 cut(s) | 1407 |
| BssT1I | CCWWGG | 1 cut(s) | 1598 |
| Bst1107I | GTATAC | 1 cut(s) | 250 |
| Bst2UI | CCWGG | 3 cut(s) | 572, 657, 1782 |
| Bst4CI | ACNGT | 3 cut(s) | 70, 207, 1084 |
| Bst6I | CTCTTC | 4 cut(s) | 365, 718, 1291, 1632 |
| BstACI | GRCGYC | 1 cut(s) | 1407 |
| BstAUI | TGTACA | 1 cut(s) | 1342 |
| BstBI | TTCGAA | 2 cut(s) | 368, 1196 |
| BstC8I | GCNNGC | 3 cut(s) | 653, 748, 1657 |
| BstDSI | CCRYGG | 2 cut(s) | 817, 1598 |
| BstF5I | GGATG | 3 cut(s) | 117, 247, 988 |
| BstKTI | GATC | 6 cut(s) | 805, 1148, 1379, 1535, 1585, 1726 |
| BstMAI | GTCTC | 2 cut(s) | 1090, 1562 |
| BstMBI | GATC | 6 cut(s) | 802, 1145, 1376, 1532, 1582, 1723 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 11, 648, 752, 1101, 1703, 1804 |
| BstNI | CCWGG | 3 cut(s) | 572, 657, 1782 |
| BstNSI | RCATGY | 1 cut(s) | 1012 |
| BstSCI | CCNGG | 5 cut(s) | 19, 570, 655, 1305, 1780 |
| BstSFI | CTRYAG | 1 cut(s) | 1698 |
| BstV1I | GCAGC | 5 cut(s) | 118, 542, 1432, 1623, 1751 |
| BstV2I | GAAGAC | 1 cut(s) | 1752 |
| BstX2I | RGATCY | 2 cut(s) | 1532, 1582 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 726 |
| BstYI | RGATCY | 2 cut(s) | 1532, 1582 |
| BstZ17I | GTATAC | 1 cut(s) | 250 |
| BsuRI | GGCC | 1 cut(s) | 1263 |
| BtgI | CCRYGG | 2 cut(s) | 817, 1598 |
| BtgZI | GCGATG | 1 cut(s) | 20 |
| BtrI | CACGTC | 1 cut(s) | 435 |
| BtsCI | GGATG | 3 cut(s) | 117, 247, 988 |
| BtsI | GCAGTG | 1 cut(s) | 337 |
| BtsIMutI | CAGTG | 3 cut(s) | 337, 726, 1333 |
| BveI | ACCTGC | 1 cut(s) | 601 |
| Cac8I | GCNNGC | 3 cut(s) | 653, 748, 1657 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1712 |
| CseI | GACGC | 1 cut(s) | 1281 |
| Csp6I | GTAC | 4 cut(s) | 1023, 1047, 1080, 1343 |
| CviAII | CATG | 6 cut(s) | 873, 978, 1009, 1163, 1537, 1599 |
| CviQI | GTAC | 4 cut(s) | 1023, 1047, 1080, 1343 |
| DpnI | GATC | 6 cut(s) | 804, 1147, 1378, 1534, 1584, 1725 |
| DpnII | GATC | 6 cut(s) | 802, 1145, 1376, 1532, 1582, 1723 |
| DraIII | CACNNNGTG | 1 cut(s) | 1351 |
| DriI | GACNNNNNGTC | 1 cut(s) | 517 |
| EaeI | YGGCCR | 1 cut(s) | 1261 |
| Eam1104I | CTCTTC | 4 cut(s) | 365, 718, 1291, 1632 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 517 |
| EarI | CTCTTC | 4 cut(s) | 365, 718, 1291, 1632 |
| Ecl136II | GAGCTC | 1 cut(s) | 1234 |
| Eco130I | CCWWGG | 1 cut(s) | 1598 |
| Eco24I | GRGCYC | 4 cut(s) | 831, 1097, 1236, 1634 |
| Eco31I | GGTCTC | 1 cut(s) | 1562 |
| Eco32I | GATATC | 1 cut(s) | 1033 |
| Eco53kI | GAGCTC | 1 cut(s) | 1234 |
| Eco57I | CTGAAG | 3 cut(s) | 65, 1656, 1764 |
| EcoICRI | GAGCTC | 1 cut(s) | 1234 |
| EcoRI | GAATTC | 1 cut(s) | 838 |
| EcoRII | CCWGG | 3 cut(s) | 570, 655, 1780 |
| EcoRV | GATATC | 1 cut(s) | 1033 |
| EcoT14I | CCWWGG | 1 cut(s) | 1598 |
| EcoT38I | GRGCYC | 4 cut(s) | 831, 1097, 1236, 1634 |
| ErhI | CCWWGG | 1 cut(s) | 1598 |
| FaeI | CATG | 6 cut(s) | 876, 981, 1012, 1166, 1540, 1602 |
| FaqI | GGGAC | 2 cut(s) | 73, 1394 |
| FatI | CATG | 6 cut(s) | 872, 977, 1008, 1162, 1536, 1598 |
| FauI | CCCGC | 2 cut(s) | 43, 693 |
| FblI | GTMKAC | 1 cut(s) | 249 |
| Fnu4HI | GCNGC | 6 cut(s) | 107, 531, 1446, 1612, 1737, 1740 |
| FokI | GGATG | 3 cut(s) | 124, 254, 995 |
| FriOI | GRGCYC | 4 cut(s) | 831, 1097, 1236, 1634 |
| Fsp4HI | GCNGC | 6 cut(s) | 107, 531, 1446, 1612, 1737, 1740 |
| FspBI | CTAG | 6 cut(s) | 171, 219, 267, 693, 762, 1319 |
| GluI | GCNGC | 6 cut(s) | 107, 531, 1446, 1612, 1737, 1740 |
| GsuI | CTGGAG | 3 cut(s) | 126, 1200, 1443 |
| HaeIII | GGCC | 1 cut(s) | 1263 |
| HapII | CCGG | 2 cut(s) | 21, 1307 |
| HgaI | GACGC | 1 cut(s) | 1281 |
| Hin1I | GRCGYC | 1 cut(s) | 1407 |
| Hin1II | CATG | 6 cut(s) | 876, 981, 1012, 1166, 1540, 1602 |
| HincII | GTYRAC | 1 cut(s) | 1386 |
| HindII | GTYRAC | 1 cut(s) | 1386 |
| HindIII | AAGCTT | 2 cut(s) | 1645, 1824 |
| HinfI | GANTC | 9 cut(s) | 137, 214, 340, 575, 730, 986, 997, 1267, 1310 |
| HpaII | CCGG | 2 cut(s) | 21, 1307 |
| HphI | GGTGA | 4 cut(s) | 521, 629, 1416, 1753 |
| Hpy166II | GTNNAC | 6 cut(s) | 250, 880, 1047, 1071, 1345, 1386 |
| Hpy188III | TCNNGA | 9 cut(s) | 73, 674, 800, 958, 1217, 1460, 1712, 1730, 1819 |
| Hpy8I | GTNNAC | 6 cut(s) | 250, 880, 1047, 1071, 1345, 1386 |
| Hpy99I | CGWCG | 1 cut(s) | 1275 |
| HpyAV | CCTTC | 4 cut(s) | 422, 912, 1634, 1683 |
| HpyCH4III | ACNGT | 3 cut(s) | 70, 207, 1084 |
| HpyCH4IV | ACGT | 2 cut(s) | 434, 1407 |
| HpyCH4V | TGCA | 6 cut(s) | 257, 273, 530, 1473, 1540, 1611 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 11, 648, 752, 1101, 1703, 1804 |
| HpySE526I | ACGT | 2 cut(s) | 434, 1407 |
| Hsp92I | GRCGYC | 1 cut(s) | 1407 |
| Hsp92II | CATG | 6 cut(s) | 876, 981, 1012, 1166, 1540, 1602 |
| KpnI | GGTACC | 1 cut(s) | 1026 |
| Kzo9I | GATC | 6 cut(s) | 802, 1145, 1376, 1532, 1582, 1723 |
| LmnI | GCTCC | 3 cut(s) | 19, 151, 1784 |
| Lsp1109I | GCAGC | 5 cut(s) | 118, 542, 1432, 1623, 1751 |
| LweI | GCATC | 4 cut(s) | 47, 556, 1113, 1723 |
| MaeI | CTAG | 6 cut(s) | 171, 219, 267, 693, 762, 1319 |
| MaeII | ACGT | 2 cut(s) | 434, 1407 |
| MaeIII | GTNAC | 3 cut(s) | 487, 509, 1210 |
| MalI | GATC | 6 cut(s) | 804, 1147, 1378, 1534, 1584, 1725 |
| MboI | GATC | 6 cut(s) | 802, 1145, 1376, 1532, 1582, 1723 |
| MfeI | CAATTG | 1 cut(s) | 582 |
| MflI | RGATCY | 2 cut(s) | 1532, 1582 |
| MhlI | GDGCHC | 4 cut(s) | 831, 1097, 1236, 1634 |
| MlsI | TGGCCA | 1 cut(s) | 1263 |
| MluCI | AATT | 7 cut(s) | 582, 838, 863, 1255, 1369, 1478, 1575 |
| MluNI | TGGCCA | 1 cut(s) | 1263 |
| MlyI | GAGTC | 3 cut(s) | 980, 1006, 1261 |
| Mox20I | TGGCCA | 1 cut(s) | 1263 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1707 |
| MscI | TGGCCA | 1 cut(s) | 1263 |
| MseI | TTAA | 6 cut(s) | 554, 1154, 1367, 1394, 1467, 1578 |
| MslI | CAYNNNNRTG | 3 cut(s) | 236, 764, 1793 |
| Msp20I | TGGCCA | 1 cut(s) | 1263 |
| MspA1I | CMGCKG | 5 cut(s) | 109, 533, 935, 1553, 1742 |
| MspI | CCGG | 2 cut(s) | 21, 1307 |
| MspR9I | CCNGG | 5 cut(s) | 21, 572, 657, 1307, 1782 |
| MunI | CAATTG | 1 cut(s) | 582 |
| Mva1269I | GAATGC | 3 cut(s) | 121, 301, 1447 |
| MvaI | CCWGG | 3 cut(s) | 572, 657, 1782 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 11, 648, 752, 1101, 1703, 1804 |
| NciI | CCSGG | 2 cut(s) | 21, 1307 |
| NcoI | CCATGG | 1 cut(s) | 1598 |
| NdeII | GATC | 6 cut(s) | 802, 1145, 1376, 1532, 1582, 1723 |
| NlaIII | CATG | 6 cut(s) | 876, 981, 1012, 1166, 1540, 1602 |
| NlaIV | GGNNCC | 6 cut(s) | 669, 754, 1024, 1534, 1584, 1786 |
| NmuCI | GTSAC | 2 cut(s) | 509, 1210 |
| NspI | RCATGY | 1 cut(s) | 1012 |
| NspV | TTCGAA | 2 cut(s) | 368, 1196 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1094 |
| PctI | GAATGC | 3 cut(s) | 121, 301, 1447 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1707 |
| PfeI | GAWTC | 6 cut(s) | 137, 214, 340, 575, 730, 1310 |
| PfoI | TCCNGGA | 1 cut(s) | 1780 |
| PkrI | GCNGC | 6 cut(s) | 108, 532, 1447, 1613, 1738, 1741 |
| PleI | GAGTC | 3 cut(s) | 980, 1005, 1261 |
| PpsI | GAGTC | 3 cut(s) | 980, 1005, 1261 |
| Psp124BI | GAGCTC | 1 cut(s) | 1236 |
| Psp6I | CCWGG | 3 cut(s) | 570, 655, 1780 |
| PspGI | CCWGG | 3 cut(s) | 570, 655, 1780 |
| PspN4I | GGNNCC | 6 cut(s) | 669, 754, 1024, 1534, 1584, 1786 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1692, 1724 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1712 |
| PsuI | RGATCY | 2 cut(s) | 1532, 1582 |
| PvuII | CAGCTG | 3 cut(s) | 533, 935, 1742 |
| RsaI | GTAC | 4 cut(s) | 1024, 1048, 1081, 1344 |
| RsaNI | GTAC | 4 cut(s) | 1023, 1047, 1080, 1343 |
| RseI | CAYNNNNRTG | 3 cut(s) | 236, 764, 1793 |
| SacI | GAGCTC | 1 cut(s) | 1236 |
| SaqAI | TTAA | 6 cut(s) | 554, 1154, 1367, 1394, 1467, 1578 |
| SatI | GCNGC | 6 cut(s) | 107, 531, 1446, 1612, 1737, 1740 |
| Sau3AI | GATC | 6 cut(s) | 802, 1145, 1376, 1532, 1582, 1723 |
| SchI | GAGTC | 3 cut(s) | 980, 1006, 1261 |
| ScrFI | CCNGG | 5 cut(s) | 21, 572, 657, 1307, 1782 |
| SduI | GDGCHC | 4 cut(s) | 831, 1097, 1236, 1634 |
| SfaNI | GCATC | 4 cut(s) | 47, 556, 1113, 1723 |
| SfcI | CTRYAG | 1 cut(s) | 1698 |
| SfuI | TTCGAA | 2 cut(s) | 368, 1196 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 236, 764, 1793 |
| SmlI | CTYRAG | 3 cut(s) | 776, 958, 1276 |
| SmoI | CTYRAG | 3 cut(s) | 776, 958, 1276 |
| SpeI | ACTAGT | 2 cut(s) | 692, 761 |
| Sse9I | AATT | 7 cut(s) | 582, 838, 863, 1255, 1369, 1478, 1575 |
| SsiI | CCGC | 8 cut(s) | 36, 109, 507, 700, 750, 899, 1551, 1736 |
| SspMI | CTAG | 6 cut(s) | 171, 219, 267, 693, 762, 1319 |
| SstI | GAGCTC | 1 cut(s) | 1236 |
| StyD4I | CCNGG | 5 cut(s) | 19, 570, 655, 1305, 1780 |
| StyI | CCWWGG | 1 cut(s) | 1598 |
| TaaI | ACNGT | 3 cut(s) | 70, 207, 1084 |
| TaiI | ACGT | 2 cut(s) | 437, 1410 |
| TaqI | TCGA | 6 cut(s) | 368, 448, 1097, 1196, 1270, 1650 |
| TasI | AATT | 7 cut(s) | 582, 838, 863, 1255, 1369, 1478, 1575 |
| TatI | WGTACW | 2 cut(s) | 1079, 1342 |
| TauI | GCSGC | 1 cut(s) | 1739 |
| TfiI | GAWTC | 6 cut(s) | 137, 214, 340, 575, 730, 1310 |
| Tru1I | TTAA | 6 cut(s) | 554, 1154, 1367, 1394, 1467, 1578 |
| Tru9I | TTAA | 6 cut(s) | 554, 1154, 1367, 1394, 1467, 1578 |
| TscAI | CASTG | 3 cut(s) | 337, 726, 1333 |
| TseFI | GTSAC | 2 cut(s) | 509, 1210 |
| TseI | GCWGC | 5 cut(s) | 106, 530, 1445, 1611, 1739 |
| Tsp45I | GTSAC | 2 cut(s) | 509, 1210 |
| TspDTI | ATGAA | 8 cut(s) | 128, 150, 258, 489, 722, 861, 1665, 1679 |
| TspGWI | ACGGA | 3 cut(s) | 470, 1362, 1490 |
| TspRI | CASTG | 3 cut(s) | 337, 726, 1333 |
| XapI | RAATTY | 2 cut(s) | 838, 1255 |
| XceI | RCATGY | 1 cut(s) | 1012 |
| XmiI | GTMKAC | 1 cut(s) | 249 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1707 |
| XspI | CTAG | 6 cut(s) | 171, 219, 267, 693, 762, 1319 |
| ZraI | GACGTC | 1 cut(s) | 1408 |